NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F038665

Metagenome / Metatranscriptome Family F038665

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F038665
Family Type Metagenome / Metatranscriptome
Number of Sequences 165
Average Sequence Length 88 residues
Representative Sequence VRFLKSELEREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDTVAGSSQGD
Number of Associated Samples 122
Number of Associated Scaffolds 165

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 31.52 %
% of genes near scaffold ends (potentially truncated) 23.03 %
% of genes from short scaffolds (< 2000 bps) 82.42 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.182 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(13.939 % of family members)
Environment Ontology (ENVO) Unclassified
(18.788 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.939 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.27%    β-sheet: 22.88%    Coil/Unstructured: 50.85%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 165 Family Scaffolds
PF02190LON_substr_bdg 17.58
PF13783DUF4177 7.27
PF07992Pyr_redox_2 4.24
PF00202Aminotran_3 3.64
PF02852Pyr_redox_dim 1.82
PF13442Cytochrome_CBB3 1.82
PF13456RVT_3 1.21
PF00211Guanylate_cyc 1.21
PF00535Glycos_transf_2 1.21
PF12680SnoaL_2 1.21
PF03793PASTA 0.61
PF01425Amidase 0.61
PF00733Asn_synthase 0.61
PF00171Aldedh 0.61
PF08241Methyltransf_11 0.61
PF00069Pkinase 0.61
PF13450NAD_binding_8 0.61
PF13673Acetyltransf_10 0.61
PF00313CSD 0.61
PF00067p450 0.61
PF13360PQQ_2 0.61
PF02371Transposase_20 0.61
PF02566OsmC 0.61
PF00174Oxidored_molyb 0.61
PF00107ADH_zinc_N 0.61
PF13091PLDc_2 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 165 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 2.42
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 1.21
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.61
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.61
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.61
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.61
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.61
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.61
COG2124Cytochrome P450Defense mechanisms [V] 0.61
COG3547TransposaseMobilome: prophages, transposons [X] 0.61
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.61
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.61


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.18 %
UnclassifiedrootN/A1.82 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725002|GPICC_F5MS3JC01EFACSAll Organisms → cellular organisms → Bacteria → Terrabacteria group502Open in IMG/M
2124908045|KansclcFeb2_ConsensusfromContig513611All Organisms → cellular organisms → Bacteria → Terrabacteria group523Open in IMG/M
3300000550|F24TB_10369698All Organisms → cellular organisms → Bacteria → Terrabacteria group577Open in IMG/M
3300000891|JGI10214J12806_10886262All Organisms → cellular organisms → Bacteria → Terrabacteria group515Open in IMG/M
3300003993|Ga0055468_10279445All Organisms → cellular organisms → Bacteria → Terrabacteria group530Open in IMG/M
3300004114|Ga0062593_100612592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300004114|Ga0062593_101571590All Organisms → cellular organisms → Bacteria → Terrabacteria group712Open in IMG/M
3300004156|Ga0062589_100074903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2034Open in IMG/M
3300004156|Ga0062589_100716465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria891Open in IMG/M
3300004157|Ga0062590_100491042All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300004463|Ga0063356_101371114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1039Open in IMG/M
3300004463|Ga0063356_102842345All Organisms → cellular organisms → Bacteria → Terrabacteria group746Open in IMG/M
3300004479|Ga0062595_101453342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. OSY-SE629Open in IMG/M
3300005168|Ga0066809_10042947All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300005937|Ga0081455_10380878All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300005937|Ga0081455_10901867All Organisms → cellular organisms → Bacteria → Terrabacteria group550Open in IMG/M
3300006038|Ga0075365_10160206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1568Open in IMG/M
3300006038|Ga0075365_10215080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1348Open in IMG/M
3300006049|Ga0075417_10085126All Organisms → cellular organisms → Bacteria → Terrabacteria group1417Open in IMG/M
3300006575|Ga0074053_11448848All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300006844|Ga0075428_100751082All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300006844|Ga0075428_101945897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria610Open in IMG/M
3300006845|Ga0075421_102046263All Organisms → cellular organisms → Bacteria → Terrabacteria group609Open in IMG/M
3300006846|Ga0075430_101787873All Organisms → cellular organisms → Bacteria → Terrabacteria group504Open in IMG/M
3300006847|Ga0075431_101382631All Organisms → cellular organisms → Bacteria → Terrabacteria group664Open in IMG/M
3300006876|Ga0079217_10008436All Organisms → cellular organisms → Bacteria3218Open in IMG/M
3300006894|Ga0079215_11279384All Organisms → cellular organisms → Bacteria → Terrabacteria group565Open in IMG/M
3300006918|Ga0079216_11563827All Organisms → cellular organisms → Bacteria → Terrabacteria group556Open in IMG/M
3300007004|Ga0079218_10002324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7429Open in IMG/M
3300007004|Ga0079218_10300836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1302Open in IMG/M
3300007790|Ga0105679_10347739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1745Open in IMG/M
3300007790|Ga0105679_10352290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1072Open in IMG/M
3300007790|Ga0105679_10555349All Organisms → cellular organisms → Bacteria1382Open in IMG/M
3300007790|Ga0105679_10841643All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300009094|Ga0111539_10371247All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300009094|Ga0111539_12689386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria577Open in IMG/M
3300009100|Ga0075418_11155396Not Available839Open in IMG/M
3300009147|Ga0114129_10064758All Organisms → cellular organisms → Bacteria5101Open in IMG/M
3300009147|Ga0114129_10672700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1334Open in IMG/M
3300009147|Ga0114129_11742040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria759Open in IMG/M
3300009156|Ga0111538_11710264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria792Open in IMG/M
3300009156|Ga0111538_13724341All Organisms → cellular organisms → Bacteria → Terrabacteria group528Open in IMG/M
3300009157|Ga0105092_10396121All Organisms → cellular organisms → Bacteria → Terrabacteria group785Open in IMG/M
3300009789|Ga0126307_10118186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2109Open in IMG/M
3300009789|Ga0126307_10152092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1852Open in IMG/M
3300009811|Ga0105084_1098010All Organisms → cellular organisms → Bacteria → Terrabacteria group552Open in IMG/M
3300009840|Ga0126313_10450231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1026Open in IMG/M
3300009840|Ga0126313_10827130All Organisms → cellular organisms → Bacteria → Terrabacteria group754Open in IMG/M
3300010037|Ga0126304_10635516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria720Open in IMG/M
3300010037|Ga0126304_10658783All Organisms → cellular organisms → Bacteria → Terrabacteria group707Open in IMG/M
3300010037|Ga0126304_10877613All Organisms → cellular organisms → Bacteria → Terrabacteria group610Open in IMG/M
3300010038|Ga0126315_10160825All Organisms → cellular organisms → Bacteria → Terrabacteria group1335Open in IMG/M
3300010038|Ga0126315_10164356All Organisms → cellular organisms → Bacteria → Terrabacteria group1321Open in IMG/M
3300010038|Ga0126315_11224935All Organisms → cellular organisms → Bacteria → Terrabacteria group510Open in IMG/M
3300010039|Ga0126309_10001164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia9236Open in IMG/M
3300010039|Ga0126309_10001508All Organisms → cellular organisms → Bacteria8273Open in IMG/M
3300010039|Ga0126309_10402916All Organisms → cellular organisms → Bacteria → Terrabacteria group819Open in IMG/M
3300010040|Ga0126308_10368261All Organisms → cellular organisms → Bacteria → Terrabacteria group954Open in IMG/M
3300010041|Ga0126312_10563583All Organisms → cellular organisms → Bacteria → Terrabacteria group817Open in IMG/M
3300010041|Ga0126312_11034984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300010041|Ga0126312_11424448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria514Open in IMG/M
3300010042|Ga0126314_10063864All Organisms → cellular organisms → Bacteria2428Open in IMG/M
3300010044|Ga0126310_10338192All Organisms → cellular organisms → Bacteria → Terrabacteria group1051Open in IMG/M
3300010045|Ga0126311_10396476Not Available1061Open in IMG/M
3300010045|Ga0126311_11258408All Organisms → cellular organisms → Bacteria → Terrabacteria group614Open in IMG/M
3300010166|Ga0126306_10008339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6438Open in IMG/M
3300010166|Ga0126306_11695702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria528Open in IMG/M
3300010399|Ga0134127_11176533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria833Open in IMG/M
3300010400|Ga0134122_10595687All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300011442|Ga0137437_1212675All Organisms → cellular organisms → Bacteria → Terrabacteria group671Open in IMG/M
3300012091|Ga0136625_1215771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria651Open in IMG/M
3300012092|Ga0136621_1160527All Organisms → cellular organisms → Bacteria → Terrabacteria group898Open in IMG/M
3300012093|Ga0136632_10067679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1650Open in IMG/M
3300012093|Ga0136632_10502456All Organisms → cellular organisms → Bacteria → Terrabacteria group538Open in IMG/M
3300012186|Ga0136620_10000731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria14934Open in IMG/M
3300012186|Ga0136620_10023269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2942Open in IMG/M
3300012186|Ga0136620_10119171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1205Open in IMG/M
3300012187|Ga0136622_10106280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1191Open in IMG/M
3300012188|Ga0136618_10063099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1637Open in IMG/M
3300012188|Ga0136618_10509686All Organisms → cellular organisms → Bacteria → Terrabacteria group521Open in IMG/M
3300012204|Ga0137374_10000136All Organisms → cellular organisms → Bacteria61861Open in IMG/M
3300012353|Ga0137367_10636886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi745Open in IMG/M
3300012355|Ga0137369_10241566All Organisms → cellular organisms → Bacteria1371Open in IMG/M
3300012489|Ga0157349_1015039All Organisms → cellular organisms → Bacteria → Terrabacteria group674Open in IMG/M
3300012678|Ga0136615_10345820All Organisms → cellular organisms → Bacteria → Terrabacteria group650Open in IMG/M
3300012680|Ga0136612_10007569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5324Open in IMG/M
3300012681|Ga0136613_10326254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria848Open in IMG/M
3300012684|Ga0136614_10060783All Organisms → cellular organisms → Bacteria2858Open in IMG/M
3300012684|Ga0136614_10104240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2150Open in IMG/M
3300012684|Ga0136614_10152373All Organisms → cellular organisms → Bacteria1751Open in IMG/M
3300012684|Ga0136614_11039929All Organisms → cellular organisms → Bacteria → Terrabacteria group563Open in IMG/M
3300012685|Ga0137397_10372691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1063Open in IMG/M
3300012897|Ga0157285_10220497All Organisms → cellular organisms → Bacteria → Terrabacteria group607Open in IMG/M
3300012902|Ga0157291_10412821All Organisms → cellular organisms → Bacteria → Terrabacteria group504Open in IMG/M
3300012907|Ga0157283_10185410All Organisms → cellular organisms → Bacteria → Terrabacteria group644Open in IMG/M
3300012908|Ga0157286_10055811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1030Open in IMG/M
3300012910|Ga0157308_10055746All Organisms → cellular organisms → Bacteria → Terrabacteria group1044Open in IMG/M
3300014326|Ga0157380_12564426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria576Open in IMG/M
3300015170|Ga0120098_1029006All Organisms → cellular organisms → Bacteria → Terrabacteria group719Open in IMG/M
3300015200|Ga0173480_10652302All Organisms → cellular organisms → Bacteria → Terrabacteria group653Open in IMG/M
3300015371|Ga0132258_13780672All Organisms → cellular organisms → Bacteria → Terrabacteria group1031Open in IMG/M
3300015372|Ga0132256_100127434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2522Open in IMG/M
3300015372|Ga0132256_100399127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1477Open in IMG/M
3300017787|Ga0183260_10001053All Organisms → cellular organisms → Bacteria23459Open in IMG/M
3300017789|Ga0136617_10026199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5202Open in IMG/M
3300017789|Ga0136617_10135053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2114Open in IMG/M
3300017789|Ga0136617_10271822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1404Open in IMG/M
3300018061|Ga0184619_10216184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium881Open in IMG/M
3300018067|Ga0184611_1289275All Organisms → cellular organisms → Bacteria → Terrabacteria group572Open in IMG/M
3300018072|Ga0184635_10109404All Organisms → cellular organisms → Bacteria → Terrabacteria group1095Open in IMG/M
3300018081|Ga0184625_10649711All Organisms → cellular organisms → Bacteria → Terrabacteria group511Open in IMG/M
3300018083|Ga0184628_10021854All Organisms → cellular organisms → Bacteria3155Open in IMG/M
3300018422|Ga0190265_11648390All Organisms → cellular organisms → Bacteria → Terrabacteria group752Open in IMG/M
3300018422|Ga0190265_12728734All Organisms → cellular organisms → Bacteria → Terrabacteria group590Open in IMG/M
3300018422|Ga0190265_13466688All Organisms → cellular organisms → Bacteria → Terrabacteria group526Open in IMG/M
3300018429|Ga0190272_11172938All Organisms → cellular organisms → Bacteria → Terrabacteria group752Open in IMG/M
3300018466|Ga0190268_10863202All Organisms → cellular organisms → Bacteria → Terrabacteria group697Open in IMG/M
3300018469|Ga0190270_10012240All Organisms → cellular organisms → Bacteria4927Open in IMG/M
3300018469|Ga0190270_13302358All Organisms → cellular organisms → Bacteria → Terrabacteria group511Open in IMG/M
3300018476|Ga0190274_10603896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1124Open in IMG/M
3300020202|Ga0196964_10223580All Organisms → cellular organisms → Bacteria → Terrabacteria group876Open in IMG/M
3300021062|Ga0196974_1044337All Organisms → cellular organisms → Bacteria → Terrabacteria group726Open in IMG/M
3300021080|Ga0210382_10127499All Organisms → cellular organisms → Bacteria → Terrabacteria group1079Open in IMG/M
3300021081|Ga0210379_10193622All Organisms → cellular organisms → Bacteria → Terrabacteria group875Open in IMG/M
3300021082|Ga0210380_10021107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2758Open in IMG/M
3300022756|Ga0222622_10924197All Organisms → cellular organisms → Bacteria → Terrabacteria group640Open in IMG/M
3300022883|Ga0247786_1069429All Organisms → cellular organisms → Bacteria → Terrabacteria group733Open in IMG/M
3300022901|Ga0247788_1104787All Organisms → cellular organisms → Bacteria → Terrabacteria group561Open in IMG/M
3300025918|Ga0207662_10325799All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300025935|Ga0207709_10962936All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria696Open in IMG/M
3300025945|Ga0207679_11529739All Organisms → cellular organisms → Bacteria → Terrabacteria group612Open in IMG/M
3300026075|Ga0207708_10546133All Organisms → cellular organisms → Bacteria → Terrabacteria group977Open in IMG/M
3300026121|Ga0207683_11551200All Organisms → cellular organisms → Bacteria → Terrabacteria group611Open in IMG/M
3300027056|Ga0209879_1046228All Organisms → cellular organisms → Bacteria → Terrabacteria group711Open in IMG/M
3300027637|Ga0209818_1160917All Organisms → cellular organisms → Bacteria → Terrabacteria group636Open in IMG/M
3300027821|Ga0209811_10302684All Organisms → cellular organisms → Bacteria → Terrabacteria group616Open in IMG/M
3300027873|Ga0209814_10273341All Organisms → cellular organisms → Bacteria → Terrabacteria group734Open in IMG/M
3300027876|Ga0209974_10295100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria619Open in IMG/M
3300027886|Ga0209486_10233258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1056Open in IMG/M
3300027886|Ga0209486_10753113All Organisms → cellular organisms → Bacteria → Terrabacteria group633Open in IMG/M
3300027907|Ga0207428_10765160All Organisms → cellular organisms → Bacteria → Terrabacteria group688Open in IMG/M
3300027909|Ga0209382_10534611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1286Open in IMG/M
3300028104|Ga0247713_1003998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5844Open in IMG/M
3300028104|Ga0247713_1015225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2221Open in IMG/M
3300028104|Ga0247713_1021241All Organisms → cellular organisms → Bacteria1746Open in IMG/M
3300028587|Ga0247828_10963192All Organisms → cellular organisms → Bacteria → Terrabacteria group555Open in IMG/M
3300028608|Ga0247819_10450750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria752Open in IMG/M
3300028708|Ga0307295_10134798All Organisms → cellular organisms → Bacteria → Terrabacteria group680Open in IMG/M
3300028796|Ga0307287_10261955All Organisms → cellular organisms → Bacteria → Terrabacteria group654Open in IMG/M
3300028803|Ga0307281_10034085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1542Open in IMG/M
3300030006|Ga0299907_10519521All Organisms → cellular organisms → Bacteria → Terrabacteria group938Open in IMG/M
3300030006|Ga0299907_10595657Not Available861Open in IMG/M
3300031092|Ga0308204_10253113All Organisms → cellular organisms → Bacteria → Terrabacteria group572Open in IMG/M
3300031229|Ga0299913_10005181All Organisms → cellular organisms → Bacteria11089Open in IMG/M
3300031548|Ga0307408_100116676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2061Open in IMG/M
3300031562|Ga0310886_11050160All Organisms → cellular organisms → Bacteria → Terrabacteria group524Open in IMG/M
3300031731|Ga0307405_10022534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3563Open in IMG/M
3300031858|Ga0310892_10995103All Organisms → cellular organisms → Bacteria → Terrabacteria group591Open in IMG/M
3300031908|Ga0310900_10516132All Organisms → cellular organisms → Bacteria → Terrabacteria group931Open in IMG/M
3300031949|Ga0214473_10090095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3583Open in IMG/M
3300032075|Ga0310890_10859471All Organisms → cellular organisms → Bacteria → Terrabacteria group722Open in IMG/M
3300033407|Ga0214472_11272172All Organisms → cellular organisms → Bacteria → Terrabacteria group638Open in IMG/M
3300033550|Ga0247829_11386777All Organisms → cellular organisms → Bacteria → Terrabacteria group581Open in IMG/M
3300034147|Ga0364925_0000887All Organisms → cellular organisms → Bacteria8320Open in IMG/M
3300034149|Ga0364929_0025120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1740Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.94%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil13.94%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand12.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.30%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.64%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil3.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.03%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.42%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.82%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.21%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.21%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.21%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.21%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.21%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.21%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.21%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.21%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.61%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.61%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.61%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.61%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.61%
FossillEnvironmental → Terrestrial → Soil → Fossil → Unclassified → Fossill0.61%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.61%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725002Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012091Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)EnvironmentalOpen in IMG/M
3300012092Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)EnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012186Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)EnvironmentalOpen in IMG/M
3300012187Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)EnvironmentalOpen in IMG/M
3300012188Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012678Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)EnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012681Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015170Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300021062Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10-13CEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300022901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027056Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028104Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-1-E_NEnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPICC_001409102067725002SoilLKSELEREELAQLEAERARRDLAPERRWEYSVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPVDDTVAGSSHGD
KansclcFeb2_094096602124908045SoilLKSELEREELAQLEAERARRDQDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDTLAGSSHGD
F24TB_1036969813300000550SoilVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSSQGD*
JGI10214J12806_1088626213300000891SoilVRFLKSELEREELAQLEAERARRDLEPDRRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPADDTLAGSSQGD*
Ga0055468_1027944513300003993Natural And Restored WetlandsMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLNELGGKGWQLVQVIETDGHLAFYLERELSPEDTGAAE*
Ga0062593_10061259233300004114SoilVRFLKSELEREELAQLEAERARRDQAPERRWEYSVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPVDDTVAGSSHGD*
Ga0062593_10157159013300004114SoilRARAEEERRQRDENPSRRFEYYVLRVGPKARAEAPLNELGAKGWQLVQVIETDGHLAFYLERELPVGDSPAGD*
Ga0062589_10007490313300004156SoilMPLLRSDDERAARARAEEERRQRDENPSRRFEYYVLRVGPKARAEAPLNELGAKGWQLVQVIETDGHLAFYLERELPAGDAAAPDA*
Ga0062589_10071646523300004156SoilMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLNELGGKGWQLVQVIETDGHLAFYLERELSPEDTGAAAE*
Ga0062590_10049104213300004157SoilVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAESGSNGSPQGD*
Ga0063356_10137111413300004463Arabidopsis Thaliana RhizosphereAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLNELGGKGWQLVQVIETDGHLAFYLERELSPEDTGAAAE*
Ga0063356_10284234513300004463Arabidopsis Thaliana RhizosphereVRFLKSELEREELAQLEAERARRDLEPDRRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVEPADDTLAGSSQGD*
Ga0062595_10145334213300004479SoilVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSPQGD*
Ga0066809_1004294723300005168SoilVRFLKSELEREELAHLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDADADDTLAGSSHGD*
Ga0081455_1038087833300005937Tabebuia Heterophylla RhizosphereVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSE
Ga0081455_1090186713300005937Tabebuia Heterophylla RhizosphereMGLLRSDEERAARAQLEEERRQRDLNPTRKFEYHVLRVGPKARAEGQLNELGQKGWQLVQAIETDGHIAFYLEREIVLDDDADAS*
Ga0075365_1016020623300006038Populus EndosphereMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLNELGGKGWQLVQVIETDGHLAFYLERELSPEDTGAATE*
Ga0075365_1021508023300006038Populus EndosphereMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLTELGGKGWQLVQVIETDGHLAFYLERELSPEDTGDAAE*
Ga0075417_1008512633300006049Populus RhizosphereVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEEAEAGSNGSPQGD*
Ga0074053_1144884813300006575SoilVRFLKSELEREELAHLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDADGALAGSSHGD*
Ga0075428_10075108223300006844Populus RhizosphereMPLLRSDDERAARARAEEERRRRDENPPRRFEYYVLRVGPKARAEAPLNELGQKGWQLVQVIETDGHLAFYLERELSEASSAEE*
Ga0075428_10194589723300006844Populus RhizosphereMGLLRSDEERAARAQLDEERRQRDLNPTRKFEYHVLRVGPKARAEGQLNELGQKGWQLVQAIETDGHIAFYLEREIVLDDAADAT*
Ga0075421_10204626323300006845Populus RhizosphereETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSPQGD*
Ga0075430_10178787323300006846Populus RhizosphereMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLNELGGKGWQLVQVIETDGHLAFYLERELSPEDT
Ga0075431_10138263113300006847Populus RhizosphereLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSPQGD*
Ga0079217_1000843633300006876Agricultural SoilVRFLKSELEREELAHLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVSSVEAAALTDSSQGD*
Ga0079215_1127938413300006894Agricultural SoilLEAERARRDQDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDTLAGSSHGD*
Ga0079216_1156382723300006918Agricultural SoilMPLLRSEDRSRHEDDRRRRDDNPPRRFEYHVLRVGLKARAEGQLNELGGKGWQLVQVVETDGHLAFYLEREIAVEGSEPV*
Ga0079218_10002324103300007004Agricultural SoilMRFLKSELEREELAHLEAERARRDLEPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVSSVEAAALTDSSQGD*
Ga0079218_1030083623300007004Agricultural SoilVPLLRSEDRSRQEDDRRRRDENPPRRFEYHVLRVGLKARAEGQLNELGGKGWQLVQVVETDGHLAFYLEREIVLEGSDAV*
Ga0105679_1034773943300007790SoilMALLRSDEERAARARLEEERRQRDDNPARRFEYQVLRVGVKARAEGQLNELGAKGWQLVQVIETDGHLAFYLEREIVPPG*
Ga0105679_1035229033300007790SoilVRFLKPETEREADARLEAERASRDANPDRKWEYCVLRLGPKARAEAPLNELGAKGWQLVQVIETDGHLAFYMEREVEPVDDAGNGASPSHGA*
Ga0105679_1055534923300007790SoilVGLLRSSEDRDARTRFEQERKRRDEHPARRFEYHVLRVGAKVRAEGQLNELGARGWQLVQIVEMEGHLAFYFEREVAVADQAEPEPLPAVAEATDETPAA*
Ga0105679_1084164313300007790SoilVGLLSRSADDRARVEEERRRRDENPARRFEYHVLRVGLKVRAEAQINELGGKGWQLVQVVETDGHCGFYFERELAAAPAEGPVEAAPEPAEATDA*
Ga0111539_1037124733300009094Populus RhizosphereMPLLRSDDERAARARLEEERRLRDENPPRRFEYYVLRVGLKARAEAPLNELGGKGWQLVQVIETDGHLAFYLERELPAGDAAAPDG*
Ga0111539_1268938623300009094Populus RhizosphereMGLLRSDEERAARAQLEEERRQRDLNPTRKFEYHVLRVGPKARAEGQLNELGQKGWQLVQVIETDGHIAFY
Ga0075418_1115539633300009100Populus RhizosphereMPLLRSDDERAARARAEEERRRRDENPPRRFEYYVLRVGPKARAEAPLNELGQKGWQLVQVIETDGHLAFYLER
Ga0114129_1006475823300009147Populus RhizosphereLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEEAEAGSNGSPQGD*
Ga0114129_1067270023300009147Populus RhizosphereLKSELEREELAQLEAERARRDLEPDRRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPGDGAVTGSSHGD*
Ga0114129_1174204013300009147Populus RhizosphereMALLKSDDERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLTELGGKGWQLVQVIETDGHLAFYLERELSPEDTGAAAE*
Ga0111538_1171026423300009156Populus RhizosphereMALLKSDDERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLTELGGKGWQLVQVIETDGHLAFYLERELSPEDTGAATE*
Ga0111538_1372434113300009156Populus RhizosphereLFHARTLVSAVGFSAMGLLRSDEERAARAQLEEARRQRDLNPTRKFEYHVLRVGPKARAEGQLNELGQKGWQLVQAIETDGHIAFYLEREIVLDDAADAT*
Ga0105092_1039612113300009157Freshwater SedimentMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLTELGAKGWQLVQVIETDGHLAFYLERELSPEDTGAAE*
Ga0126307_1011818623300009789Serpentine SoilVRFRFARTGDKLVAMGLLRSGEDREAKARLEDERRLRDEHPARRFEYHVLRVGTKARAEGQLNELGAKGWQLVQVIETDNHLAFYLEREVAEPAGVPGDATDS*
Ga0126307_1015209233300009789Serpentine SoilMALLKSDEERAARARLEAERRRRDENPLRRFEYFVLRSGPKARAEGQLNELGQKGWQLVQVIETDGHLAFYLERELSPGDTGTDDAPAATE*
Ga0105084_109801023300009811Groundwater SandVRFLKPETEREAEARLQAERSERDANPDRRWEYFVLRLGPKARAEGPLNELGSKGWQLVQLIETDGHLAFYMERELLSAEDSVNGSGPAEPA*
Ga0126313_1045023113300009840Serpentine SoilMRFLKTEDEREQLERLEAERARRDSAPERRWEYTVLRLGPKARAEGPLNDLGAKGWQLVQVIETEGHLAFYLERELLPDDDVADDDVVAEAASNGSSHGD*
Ga0126313_1082713023300009840Serpentine SoilMHFIASADVARVSPMALLRSDDDRAAKARAEEERRRRDENPSRRFEYYVLRVGPKARAEAPLNELGGQGWQLVQVIETDGHLAFYLEREVPVGEQLG*
Ga0126304_1063551623300010037Serpentine SoilMGLLRSDEERAARAQLEEERRQRDLDPGRKFEYHVLRVGPKARAEGQLNELGAKGWQLVQAIETDGHIAFYLEREIVPDEPEAP*
Ga0126304_1065878323300010037Serpentine SoilVRFLKTEDEREQLERLEAERARRDLAPERRWEYTVLRLGPKARAEGPLNDLGAKGWQLVQVIETEGHLAFYLERELLPDDDVADDDVVAEAASNGPSHGD*
Ga0126304_1087761323300010037Serpentine SoilATLRRVRFLKSELEREELAQLEAERARRDLEPDRRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDTLAGSSQGD*
Ga0126315_1016082533300010038Serpentine SoilMRFLKTEDEREQLERLEAERARRDSAPERRWEYTVLRLGPKARAEGPLNDLGAKGWQLVQVIETEGHLAFYLERELLPDDDVADDDVVAEAASNGPSHGD*
Ga0126315_1016435623300010038Serpentine SoilMPLLRSDDERAERARLEEERRRRDENPSRRFEYYVLRVGLKARAEAPLNELGGKGWQLVQVIETDGHLAFYLERELPAGDTPPPDA*
Ga0126315_1122493523300010038Serpentine SoilMAFLKSDEGRAARAQLEEQRRRRDEHPVRRFEYTVLRVGSKARAEGPLNELGSKGWQLVQAVEMEGHVAFYLEREVFPLES
Ga0126309_1000116433300010039Serpentine SoilMPLLRSEDERAARARTEEERRQRDANPPRRFEYYVLRVGPKARAEGQLNELGGKGWQLVQVVETEGHFAFYLEREVSAGDAAAPDA*
Ga0126309_1000150843300010039Serpentine SoilMKSEAEREAEARLAAERERRDVQPDRRWEYMVLRLGPKARAEGPLNELGEKGWQLVQVIETDGHLAFYMERELNAGDDDASANGSQSD*
Ga0126309_1040291623300010039Serpentine SoilLSAIRFARTGDKLVAMGLLRSGEDREAKARLEDERRLRDEHPARRFEYHVLRVGTKARAEGQLNELGAKGWQLVQVIETDNHLAFYLEREVAEPA
Ga0126308_1036826123300010040Serpentine SoilMPLLRSEDERAARARAEEERRQRDASPARRFEYYVLRVGPKARAEGQLNELGGKGWQLVQVVETEGHFAFYLEREVPPAEPAAS*
Ga0126312_1056358323300010041Serpentine SoilMHFIESADLARVLAMPLLRSDDERAARARAEAERRQRDTSPSRRFEYYVLRVGPKARAEGQLNELGGKGWQLVQVVETEGHFAFYLERELTAEPASAED*
Ga0126312_1103498423300010041Serpentine SoilMAFLKSDEGRAARAQLEEQRRRRDEHPVRRFEYTVLRVGSKARAEGPLNELGSKGWQLVQAVEMEGHVAFYLEREVFPLESEAAGVP
Ga0126312_1142444823300010041Serpentine SoilMGLLRSDEERAMRAQQEEERRQRDLNPGRRFEYYVLRVGPKARAEGQLNELGSRGWQLVQAIETDGHIAFYL
Ga0126314_1006386433300010042Serpentine SoilMALLRSDDDRAAKARAEEERRRRDENPSRRFEYYVLRVGPKARAEAPLNELGGQGWQLVQVIETDGHLAFYLEREVPVGEQLG*
Ga0126310_1033819233300010044Serpentine SoilLERLEAERARRDSAPERRWEYTVLRLGPKARAEGPLNDLGAKGWQLVQVIETEGHLAFYLERELLPDDDVADDDVVAEAASNGSSHGD*
Ga0126311_1039647623300010045Serpentine SoilMPLLRSEDERAARARAEEERRQRDASPARRFEYYVLRVGPKARAEGQLNELGGKGWQLVQVVETEGHFAFYLEREVAPAEPESS*
Ga0126311_1125840823300010045Serpentine SoilMPLLRSDDERSARARAEEERRQRDANPSRRFEYYVLRVGPKARAEGQLNELGGKGWQLVQVVETEGHFAFYLERELTEPSAQE*
Ga0126306_1000833913300010166Serpentine SoilVRFLKSELEREELAQLEAQRARRDVDPERRWEYAVLRLGPKARAEAPLNELGAKGWQLVQVIEVDGHLAFYLERELGSDDDAALAGSSQGD*
Ga0126306_1169570213300010166Serpentine SoilMALLKSDEERAARARLEAERRRRDENPLRRFEYFVLRSGPKARAEGQLNELGQKGWQLVQVIETDGHLAFYLERELSPGDTGTDD
Ga0134127_1117653323300010399Terrestrial SoilMALLKSDEERAARARLEEERRRRDENPARRFEYFVLRSGPKARAEGQLNELGQKGWQLVQVIETDGHLAFYLERE
Ga0134122_1059568723300010400Terrestrial SoilLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAESGSNGSPQGD*
Ga0137437_121267513300011442SoilELQREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDDTLAGSSHGD*
Ga0136625_121577123300012091Polar Desert SandVGLLKSDDDRATKIRLEEERRRRDENPDRRWEYHVLRVGLKARAEGQLNELGKKGWQLVQAVETDGHLAFYLEREILPPEDSD*
Ga0136621_116052723300012092Polar Desert SandVRFLKSELEREELAQLEAQRARRDLDPERRWEYTVLRLGLKARAEGPLNELGAKGWQLVQLIEVDGHLAFYLEREVSPDEEADSNGSSQGD*
Ga0136632_1006767933300012093Polar Desert SandMAFLRSDERRDDRARLEEERRGRDENPARRFEYHVLRVGVKARAEGPLNELGAKGWQLVQAVEADGHVAFYLERELMLAVDETPGSPPADA*
Ga0136632_1050245613300012093Polar Desert SandMGLLRSDEGRTARARLDEERRVRDENPLRRFEYQVLRVGVKARAESQLNEFGAKGWQLVQMAETDGHLAFYLEREIVATDAADTADAGANGTAPTD*
Ga0136620_1000073133300012186Polar Desert SandMGLLKSDEERAARARLEEERSQRDLDPPRRFEYHVLRVGLKARAEGQLNEFGSKGWQLVQVVETEGHLAFYLEREILPAEATD*
Ga0136620_1002326913300012186Polar Desert SandMGLLRSDEGRTARARLDEERRVRDENPLRRFEYQVLRVGVKARAESQLNEFGAKGWQLVQMAETDGHLAFYLEREIVATDAADTADAGSNGTVLTDQ*
Ga0136620_1011917133300012186Polar Desert SandVRFLKSELEREELAQLEAQRARRDLDPERRWEYTVLRLGLKARAEGPLNELGAKGWQLVQLIEVDGHLAFYLEREVSPDEEADSDGSSQGD*
Ga0136622_1010628023300012187Polar Desert SandMGLLRSDEGRTARARLDEERRVRDENPLRRFEYQVLRVGVKARAESQLNDFSANDWQLVQMAETDGHIAFYLEREIVATDAADTADAGANGTAPTD*
Ga0136618_1006309923300012188Polar Desert SandMGLLRSDEGRTARALLDEERRARDESPSRRFEYQVLRVGLKARAEGQLNELGAKGWQLVQAAETDGHLAFYLEREIVATDAGETAAAGGNGTAPTD*
Ga0136618_1050968613300012188Polar Desert SandMGLLRSDEGRTARARLDEERRVRDENPSRRFEYQVLRVGVKARAESQLNEFGAKGWQLVQMAETDGHLAFYLEREIVATDAADTADAGANGTAPTD*
Ga0137374_10000136233300012204Vadose Zone SoilMKSGVEREAEARLEAERAERDLSPDRRWEYTVLRLGPKARAEGPLNELGGKGWQLVQVIETDGHLAFYLEREVVVVEDASSNGSPGD*
Ga0137367_1063688613300012353Vadose Zone SoilAERAERDLSPDRRWEYTVLRLGPKARAEGPLNELGGKGWQLVQVIETDGHLAFYLEREVVVVEDASSNGSPGD*
Ga0137369_1024156623300012355Vadose Zone SoilMPLLRSDDERAARARAEEERRQRDENPSRRFEYYVLRVGPKARAEAPLNELGEKGWQLVQVIETEGHLAFYLERELPGGPPAAEPQRD*
Ga0157349_101503913300012489Unplanted SoilLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSSQGD*
Ga0136615_1034582013300012678Polar Desert SandMGLLRSDEGRTARARLDEERRVRDENPSRLFEYQVLRVGVKARAESQLNEFGAKGWQLVQMAETDGHLAFYLEREIVATDAADTADAGANGTAPTD*
Ga0136612_1000756933300012680Polar Desert SandMGLLRSDEGRTARALLDEERRARDESPSRRFEYQVLRVGLKARAEGQLNELGAKGWQLVQAAETDGHLAFYLEREVFATDADETVDAGGNGTAPTD*
Ga0136613_1032625413300012681Polar Desert SandEAQRARRDLDPERRWEYTVLRLGLKARAEGPLNELGAKGWQLVQLIEVDGHLAFYLEREVSPDEEADSNGSSQGD*
Ga0136614_1006078323300012684Polar Desert SandMAFLRSDDRRDDRARLEEERRGRDENPARRFEYHVLRVGVKARAEGPLNELGAKGWQLVQAVEADGHVAFYLERELMLAVDETPGSPPADA*
Ga0136614_1010424023300012684Polar Desert SandVGLLKSDDDRATKIRLEEERRRRDENPDRRWEYHVLRVGLKARAEGQLNDLGKKGWQLVQAVETDGHLAFYLEREILPPEDSD*
Ga0136614_1015237323300012684Polar Desert SandVRFLKSELEREQLAQSEEQRARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLERELVPADADTLTGSSQGD*
Ga0136614_1103992913300012684Polar Desert SandMAFLRSDERRDDRARVEEERRGRDENPARRFEYHVLRVGVKARAEGPLNELGAKGWQLVQAVEADGHVAFYLERELMVAADESQSPPPPDG*
Ga0137397_1037269123300012685Vadose Zone SoilMKSEVEREAEARLEAQRAERDLTPDRRWEYTVLRLGPKARAEGPLNELGGKGWQLVQVIETDGHLAFYLERELVAVEDASSNGSPGD*
Ga0157285_1022049723300012897SoilLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSE
Ga0157291_1041282123300012902SoilLRRVRFLKSELEREELAQLEAERARRDQAPERRWEYSVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPVDDTVAGSSHGD*
Ga0157283_1018541013300012907SoilLAQLEAERARRDQAPERRWEYSVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPVDDTVAGSSHGD*
Ga0157286_1005581133300012908SoilLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSED
Ga0157308_1005574613300012910SoilVRFLKSELEREELAQLEAERARRDQAPERRWEYSVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPVDDTVAGSSHGA*
Ga0157380_1256442623300014326Switchgrass RhizosphereMGLLRSDEERAARAQLEEERRQRDLNPGRKFEYQVLRVGPKARAEGQLNELGQKGWQLVQAIETDGHIAFYLEREIVPDEPEAS*
Ga0120098_102900623300015170FossillVGLLKSDEERAARAQREEERRQRDLNPARRFEYHVLRVGMKARAEGQLNELGGKGWQLVQAIETDGHIAFYLEREVVAPEPEAS*
Ga0173480_1065230213300015200SoilVRFLKSELEREELAQLEAERARRDQAPERRWEYTVLRLGPKARAEAPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDDTLAGSSHGD*
Ga0132258_1378067223300015371Arabidopsis RhizosphereMPLLRSDDERAARARAEEERRARDENPSRRFEYYVLRVGLKARAEAPLNELGGKGWQLVQVIETDGHLAFYLERELPAGDTAPPD*
Ga0132256_10012743413300015372Arabidopsis RhizosphereEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSSQGD*
Ga0132256_10039912733300015372Arabidopsis RhizosphereLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVPEDAESGSNGSPQGD*
Ga0183260_10001053283300017787Polar Desert SandMGLLRSDEGRTARARLDEERRVRDENPLRRFEYQVLRVGVKARAESQLNEFGAKGWQLVQMAETDGHLAFYLEREIVATDAADTADAGANGTAPTD
Ga0136617_1002619943300017789Polar Desert SandMGLLKSDEERAARARLEEERSQRDLDPPRRFEYHVLRVGLKARAEGQLNEFGSKGWQLVQVVETEGHLAFYLEREILPAEATD
Ga0136617_1013505313300017789Polar Desert SandMAFLRSDERRDDRARLEEERRGRDENPARRFEYHVLRVGVKARAEGPLNELGAKGWQLVQAVEADGHVAFYLERELMLAVDETPGSPPADA
Ga0136617_1027182233300017789Polar Desert SandVRFLKSELEREELAQLEAQRARRDLDPERRWEYTVLRLGLKARAEGPLNELGAKGWQLVQLIEVDGHLAFYLEREVSPDEEADSNGSSQGD
Ga0184619_1021618423300018061Groundwater SedimentKTEEERGDRIQALEDRMARDAHPERRWEYNVLRVGPKARAEHQLNELGAKGWQLVQAIETEGHLAFYLER
Ga0184611_128927513300018067Groundwater SedimentYPSRMRFLKPEAEREAEEQLAAERSLRDLNPERRWEYTVIRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVASDDADAASNGSPQDG
Ga0184635_1010940423300018072Groundwater SedimentVRFLKPEAEREAQEQLAAERSLRDLNPERRWEYTVIRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVASDDADAASNGSPQDG
Ga0184625_1064971113300018081Groundwater SedimentVRFLKPEAEREAQEQLAAERSLRDLNPERRWEYTVIRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYLERELGPADDALTSSSQGD
Ga0184628_1002185433300018083Groundwater SedimentVRFLKSELEREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDADDTLADPSHGD
Ga0190265_1164839023300018422SoilVRFLKSELEREELAQFEAERARRDQDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDTLAGSSQGD
Ga0190265_1272873413300018422SoilEERRGEDERKQRDARPARRFEYHVLRIGTKARAEQQLNELGGRGWQLVQVIETEGHLAFYLERELGSD
Ga0190265_1346668823300018422SoilMKPESERELEASLEAERALRDGNPERRWEYTVLRLGTKVRAERPLNEFGAKGWQLVQVIETDGHLAFYLEREVVSPDEVEAGSNGSSQGD
Ga0190272_1117293813300018429SoilVRFLKSELEREELAQLEEQRARRDHDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVASADEADALADSSHGD
Ga0190268_1086320223300018466SoilVRFLKSELEREELAQLEEQRARRDLEPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVFTDGAAGSGDSSHGD
Ga0190270_1001224073300018469SoilVRFLKSELEREELAHLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVPSDDADALTDSSQGD
Ga0190270_1330235813300018469SoilVRFLKSELEREELAQLEAARARRDQDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGSDDNTLAASSHGD
Ga0190274_1060389613300018476SoilVRFLKSELKREELAQLEAERARRDQDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDVTLAGSSQGD
Ga0196964_1022358013300020202SoilVRFLKPETEREAEARLQAERLARDANPERRWEYCVVRLGPKARAEGPLNELGAKGWQLVQVIETDGHLAYYMERELLPPDDSGNGAAPSAT
Ga0196974_104433723300021062SoilVRFLKPETEREAEARLQAERLARDANPERRWEYCVVRLGPKARAEGPLNELGAKGWQLVQLIETEGHLAFYMEREVLPLDESSNGVPSQG
Ga0210382_1012749913300021080Groundwater SedimentMRFLKTEEERGDRIQALEDRMERDANPSRRWEYHVLRVGPKARAEHQLNELGAKGWQLVQAIETEGHLAFYLERELPEV
Ga0210379_1019362233300021081Groundwater SedimentVRFLKSELEREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLERE
Ga0210380_1002110713300021082Groundwater SedimentVRFLKSELEREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDDTLAGSSHGD
Ga0222622_1092419723300022756Groundwater SedimentVRFLKSELEREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDTVAGSSQGD
Ga0247786_106942923300022883SoilVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAESGSNGSPQGD
Ga0247788_110478713300022901SoilTLRRVRFLKSELEREELAQLEAERARRDQAPERRWEYSVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPVDDTVAGSSHGD
Ga0207662_1032579913300025918Switchgrass RhizosphereMPLLRSDDERAARARAEEERRARDENPSRRFEYYVLRVGLKARAEAPLNELGGKGWQLVQVIETDGHLAFYLERELPAGDT
Ga0207709_1096293623300025935Miscanthus RhizosphereMGLLRSDEERAARAQLEEERRQRDLNPGRKFEYQVLRVGPKARAEGQLNELGQKGWQLVQAIEADGHIAFYLEREIVLPDEPEAS
Ga0207679_1152973913300025945Corn RhizosphereVRFLKSELEREELAQLEAERARRDQAPERRWEYSVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVDPVDDTVAGSSHGD
Ga0207708_1054613323300026075Corn, Switchgrass And Miscanthus RhizosphereVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIETDGHLAFYLERELPVGDSPAVD
Ga0207683_1155120013300026121Miscanthus RhizosphereVRFLKSELEREELAQLEAERARRDLEPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDDTLAGSSHGD
Ga0209879_104622823300027056Groundwater SandVRFLKPETEREAEARLQAERSERDANPDRRWEYFVLRLGPKARAEGPLNELGSKGWQLVQLIETDGHLAFYMERELLSAEDSVNGSGPAEPA
Ga0209818_116091723300027637Agricultural SoilVRFLKSELEREELAHLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVSSVEAAALTDSSQGD
Ga0209811_1030268413300027821Surface SoilVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVPGDADVASNGSPQGD
Ga0209814_1027334113300027873Populus RhizosphereVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEEAEAGSNGSPQGD
Ga0209974_1029510023300027876Arabidopsis Thaliana RhizosphereMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLNELGGKGWQLVQVIETDGHLAFYLERELSPEDSGDAAG
Ga0209486_1023325823300027886Agricultural SoilVPLLRSEDRSRQEDDRRRRDENPPRRFEYHVLRVGLKARAEGQLNELGGKGWQLVQVVETDGHLAFYLEREIVLEGSDAV
Ga0209486_1075311313300027886Agricultural SoilMRFLKSELEREELAHLEAERARRDLEPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVSSVEAAALTDSSQGD
Ga0207428_1076516023300027907Populus RhizosphereVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSPQGD
Ga0209382_1053461113300027909Populus RhizosphereVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYLEREVGPEDDEDTLTGSSQGD
Ga0247713_100399853300028104SoilMPLLKSDDERAARARLEEERRRRDEHPPRRFEYHVLRVGLKARAEAQLNELGGKGWQLVQVIETDGHLAFYLERELVENDAVPAAG
Ga0247713_101522523300028104SoilVRFLKSELDREAEEQLAAERARRDVDPERRWEYTVLRLGPKARAEGPLSELGAKGWQLVQVIETDGHLAFYMEREIVSDDAGANGAGPLHER
Ga0247713_102124143300028104SoilMPLLKSDEERAARARLEEERRRRDENPARRFEYHVLRVGLKARAEAQLNELGRKGWQLVQVVETDGHLAFYLERELPEGEGADPDDA
Ga0247828_1096319213300028587SoilMALLKTDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLNELGGKGWQLVQVIETDGHLAFYLERELSPEDADAASE
Ga0247819_1045075023300028608SoilMALLKSDEERAEKARLEELRRRRDENPLRRFEYFVLRVGPKARAEGQLTELGGKGWQLVQVIETDGHLAFYLERELSPEDTGAAE
Ga0307295_1013479813300028708SoilVRFLKSELEREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDDTLAGSSQGD
Ga0307287_1026195513300028796SoilMRFLKPEAEREAEEQLAAERSLRDLNPERRWEYTVIRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVASDDADAASNGSPQDG
Ga0307281_1003408533300028803SoilVRFLKSELQREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDADDTLADSSHGD
Ga0299907_1051952113300030006SoilMALLRSDAERAARARAEEERRLRDENPARRFEYHVLRVGPKARAEVQLNEFGRKGWQLVQVIETDGHLAFYLERELPAVQEAAEPAEQSG
Ga0299907_1059565713300030006SoilRFSSMPLLKSDADRAVRARLDEERRRRDESPARRFEYHVLRVGPKARAEGQLNELGSKGWQLVQVIETDGHLAFYLERELAADAAPEPAGE
Ga0308204_1025311323300031092SoilMRFLKPEAEREAEEQLAAERSLRDLNPERRWEYTVIRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVASD
Ga0299913_1000518153300031229SoilMPLLKSDADRAVRARLDEERRRRDESPARRFEYHVLRVGPKARAEGQLNELGSKGWQLVQVIETDGHLAFYLERELAADAAPEPAGE
Ga0307408_10011667643300031548RhizosphereMALLKSDEERAARARLEEERRRRDENPLRRFEYFVLRSGPKARAEGQLNELGQKGWQLVQVIETDGHLAFYLERELSPGDAATNDAAGATE
Ga0310886_1105016023300031562SoilQLEAERARRDLEPDRRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVEPADDTLAGSSQGD
Ga0307405_1002253433300031731RhizosphereMALLKSDEERAARARLEEERRRRDENPLRRFEYFVLRSGPKARAEGQLNELGQKGWQLVQVIETDGHLAFYLERELSPGDAATDDAAGATE
Ga0310892_1099510313300031858SoilMALLKSDEERAARARLEEERRRRDENPARRFEYFVLRSGPKARAEGQLNELGQKGWQLVQVIETDGHLAFYLERELSPDDADPGDAAE
Ga0310900_1051613233300031908SoilVRFLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAEAGSNGSSQGD
Ga0214473_1009009523300031949SoilVRFLKSELEREQLAELEAQRARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLERELGRDDDAFNGSSQGD
Ga0310890_1085947123300032075SoilLKPETEREAEAQLAAERSVRDLNPERRWEYTVVRLGPKARAEGPLNELGQKGWQLVQVIEVDGHLAFYMEREVVSEDAESGSNGSPQGD
Ga0214472_1127217213300033407SoilVRFLKSELEREELAQLEAQRARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGADDDEDTLTGSSHGD
Ga0247829_1138677713300033550SoilVRFLKSELEREELAQLEAERARRDLEPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDTLAGSSHGD
Ga0364925_0000887_7845_81203300034147SedimentVRFLKSELQREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDDTLAGSSHGD
Ga0364929_0025120_1459_17403300034149SedimentVRFLKSELEREELAQLEAERARRDLDPERRWEYTVLRLGPKARAEGPLNELGAKGWQLVQVIEVDGHLAFYLEREVGPDDDADGALAGSSHGD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.