Metagenome / Metatranscriptome Family F038604

Basic Information
Family ID	F038604
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	64 residues
Representative Sequence	MKNLGIWLYRYMAIHVDHMLHHVLTVLDAMMPAPVSRPALQRVRTPVSPSLNDIRLRSDFLTPWI
Number of Associated Samples	126
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.63 %
% of genes near scaffold ends (potentially truncated)	17.58 %
% of genes from short scaffolds (< 2000 bps)	92.12 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Bacteria (92.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (38.182 % of family members)
Environment Ontology (ENVO)	Unclassified (44.848 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.242 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.01% β-sheet: 0.00% Coil/Unstructured: 56.99%
Feature Viewer

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Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF12840	HTH_20	50.30
PF00085	Thioredoxin	33.94
PF13267	DUF4058	4.85
PF13365	Trypsin_2	4.24
PF07690	MFS_1	2.42
PF01609	DDE_Tnp_1	0.61
PF13784	Fic_N	0.61
PF12681	Glyoxalase_2	0.61
PF12161	HsdM_N	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.61
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.61
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.61
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.61
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.61
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.61

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.73 %
Unclassified	root	N/A	7.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.06 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.06 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.06 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.61 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.06 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.06 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.27 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.06 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102501201	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300003373\|JGI25407J50210_10126892	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300004801\|Ga0058860_12111180	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005171\|Ga0066677_10515382	Not Available	687	Open in IMG/M
3300005181\|Ga0066678_10760043	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005186\|Ga0066676_11186771	Not Available	500	Open in IMG/M
3300005187\|Ga0066675_10488036	Not Available	920	Open in IMG/M
3300005289\|Ga0065704_10058291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	594	Open in IMG/M
3300005294\|Ga0065705_10822901	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005295\|Ga0065707_10031970	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300005332\|Ga0066388_101298687	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300005332\|Ga0066388_103045282	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005332\|Ga0066388_104173894	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005332\|Ga0066388_106022408	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005440\|Ga0070705_100801801	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005555\|Ga0066692_10819864	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005558\|Ga0066698_10879849	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005559\|Ga0066700_10524582	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005617\|Ga0068859_102926453	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005764\|Ga0066903_100566504	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300005764\|Ga0066903_105909691	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005842\|Ga0068858_102407169	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005937\|Ga0081455_10003271	All Organisms → cellular organisms → Bacteria	18747	Open in IMG/M
3300005981\|Ga0081538_10003114	All Organisms → cellular organisms → Bacteria	15776	Open in IMG/M
3300005985\|Ga0081539_10154432	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300006049\|Ga0075417_10215124	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300006800\|Ga0066660_10235873	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300006844\|Ga0075428_100028727	All Organisms → cellular organisms → Bacteria	6153	Open in IMG/M
3300006844\|Ga0075428_100092542	All Organisms → cellular organisms → Bacteria	3296	Open in IMG/M
3300006844\|Ga0075428_102761786	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006854\|Ga0075425_102516774	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006871\|Ga0075434_101819478	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006904\|Ga0075424_101076596	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300006969\|Ga0075419_10258867	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300009012\|Ga0066710_100830435	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300009088\|Ga0099830_10340263	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1204	Open in IMG/M
3300009090\|Ga0099827_10054063	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300009094\|Ga0111539_12107727	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300009098\|Ga0105245_13077640	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009100\|Ga0075418_10656758	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300009137\|Ga0066709_102701610	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009137\|Ga0066709_102985188	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300009147\|Ga0114129_10190697	All Organisms → cellular organisms → Bacteria	2783	Open in IMG/M
3300009147\|Ga0114129_10453173	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300009147\|Ga0114129_11504276	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300009156\|Ga0111538_10266870	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300009156\|Ga0111538_11729681	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009162\|Ga0075423_12588043	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009553\|Ga0105249_10333368	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300009792\|Ga0126374_10929894	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300009792\|Ga0126374_10948709	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010046\|Ga0126384_10252200	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300010046\|Ga0126384_10258767	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300010046\|Ga0126384_10692215	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300010047\|Ga0126382_10724753	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300010067\|Ga0127432_113672	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300010068\|Ga0127442_135666	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300010070\|Ga0127441_111122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	902	Open in IMG/M
3300010081\|Ga0127457_1022860	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010087\|Ga0127492_1065368	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300010095\|Ga0127475_1113289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	797	Open in IMG/M
3300010098\|Ga0127463_1038746	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010099\|Ga0127450_1092512	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300010102\|Ga0127453_1001747	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300010103\|Ga0127500_1019409	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300010103\|Ga0127500_1035533	Not Available	513	Open in IMG/M
3300010105\|Ga0127470_1008834	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300010105\|Ga0127470_1120765	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300010107\|Ga0127494_1094349	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300010108\|Ga0127474_1075001	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300010113\|Ga0127444_1004184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1098	Open in IMG/M
3300010114\|Ga0127460_1097117	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010119\|Ga0127452_1012106	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300010120\|Ga0127451_1112396	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010120\|Ga0127451_1127921	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010123\|Ga0127479_1138033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	719	Open in IMG/M
3300010124\|Ga0127498_1002555	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010128\|Ga0127486_1133677	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010128\|Ga0127486_1159776	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010134\|Ga0127484_1156012	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010134\|Ga0127484_1191791	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300010136\|Ga0127447_1067243	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010139\|Ga0127464_1151311	Not Available	742	Open in IMG/M
3300010140\|Ga0127456_1194648	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010141\|Ga0127499_1112634	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300010142\|Ga0127483_1172098	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300010142\|Ga0127483_1181577	Not Available	904	Open in IMG/M
3300010358\|Ga0126370_11332726	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010359\|Ga0126376_10209736	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300010359\|Ga0126376_10371719	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300010360\|Ga0126372_11041642	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300010360\|Ga0126372_11823607	Not Available	652	Open in IMG/M
3300010360\|Ga0126372_12083819	Not Available	615	Open in IMG/M
3300010362\|Ga0126377_10962969	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300010362\|Ga0126377_13547924	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010366\|Ga0126379_12782941	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300010398\|Ga0126383_10294623	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300010398\|Ga0126383_11421307	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300010905\|Ga0138112_1029575	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300011119\|Ga0105246_10552300	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300011271\|Ga0137393_10846269	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012199\|Ga0137383_10223077	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300012207\|Ga0137381_11188072	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012209\|Ga0137379_10315712	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300012210\|Ga0137378_10021609	All Organisms → cellular organisms → Bacteria	5646	Open in IMG/M
3300012212\|Ga0150985_101315684	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300012349\|Ga0137387_10528506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	856	Open in IMG/M
3300012351\|Ga0137386_10526351	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300012359\|Ga0137385_10126413	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300012373\|Ga0134042_1098278	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012373\|Ga0134042_1232822	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012375\|Ga0134034_1059120	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300012375\|Ga0134034_1065079	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012377\|Ga0134029_1137226	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012378\|Ga0134025_1235379	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012382\|Ga0134038_1232739	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012383\|Ga0134033_1133720	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300012385\|Ga0134023_1282542	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300012386\|Ga0134046_1070070	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012387\|Ga0134030_1005385	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300012387\|Ga0134030_1032200	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012388\|Ga0134031_1313216	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300012389\|Ga0134040_1164562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1901	Open in IMG/M
3300012393\|Ga0134052_1312128	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300012395\|Ga0134044_1009334	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012396\|Ga0134057_1032285	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300012396\|Ga0134057_1066054	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300012396\|Ga0134057_1324640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	731	Open in IMG/M
3300012398\|Ga0134051_1062284	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012401\|Ga0134055_1143611	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012402\|Ga0134059_1018793	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012402\|Ga0134059_1370160	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300012404\|Ga0134024_1076117	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300012405\|Ga0134041_1150672	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012405\|Ga0134041_1240694	Not Available	1026	Open in IMG/M
3300012406\|Ga0134053_1406725	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012407\|Ga0134050_1233622	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012407\|Ga0134050_1250022	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012410\|Ga0134060_1518427	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300012948\|Ga0126375_11352217	Not Available	601	Open in IMG/M
3300012948\|Ga0126375_11875275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300012971\|Ga0126369_10113369	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300012971\|Ga0126369_10889089	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300012971\|Ga0126369_11286050	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300013306\|Ga0163162_13068897	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300015371\|Ga0132258_10754688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2451	Open in IMG/M
3300015371\|Ga0132258_12378551	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300017792\|Ga0163161_11793306	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300018468\|Ga0066662_11481884	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300019458\|Ga0187892_10468572	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300026035\|Ga0207703_12257036	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300026075\|Ga0207708_10324541	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300027873\|Ga0209814_10062406	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300027873\|Ga0209814_10371502	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300027875\|Ga0209283_10113313	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300027882\|Ga0209590_10274585	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300027909\|Ga0209382_10037262	All Organisms → cellular organisms → Bacteria	5840	Open in IMG/M
3300028889\|Ga0247827_10764288	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300033551\|Ga0247830_10279739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1273	Open in IMG/M
3300034659\|Ga0314780_163245	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300034659\|Ga0314780_194108	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300034661\|Ga0314782_099601	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300034662\|Ga0314783_092788	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300034671\|Ga0314796_139355	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.18%
Host-Associated	Host-Associated	21.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.18%
Plants	Host-Associated → Plants	21.21%
Human	Host-Associated → Human	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Roots	Host-Associated → Plants → Roots	1.21%
Cave	Environmental → Terrestrial → Cave	0.61%
Digestive System	Host-Associated → Human → Digestive System	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.33%
Loam	Environmental → Terrestrial → Soil → Loam	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.21%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.61%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	60.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.21%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.21%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.61%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.61%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.61%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	38.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.21%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.21%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.21%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.21%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.61%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.61%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010067	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010068	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010070	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010087	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010098	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010099	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010105	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010113	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010114	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010123	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010139	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012378	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1025012012	3300000955	Soil	MKNIGFWLYRYMAIHINDALHHVWVMLDAMTPSPMYRPASQHVRTPVSPNLSDIRLRSDFLTPWI*
JGI25407J50210_101268921	3300003373	Tabebuia Heterophylla Rhizosphere	YRYIAIHVDHMLYYMLAMLDARRPALVPRPALQRVRTPVSPSLNDIRLRSDLLTPWI*
Ga0058860_121111802	3300004801	Host-Associated	MRNLGIRLYRYITMHMHHVSAVLDAMMPSSVSKPALQHVRTPASPSVNDIRVRSDLLTPWI*
Ga0066677_105153821	3300005171	Soil	EKLYMKNLGIWLYRYMAIRMGHMRHHVSAVLDAIVPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0066678_107600431	3300005181	Soil	MKSLGIWLYRYMAIRMGHMLHRVSAVLDALAPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0066676_111867711	3300005186	Soil	MKNLGIWLYRYIAIRMRHMLHHVSAVLDALAPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0066675_104880362	3300005187	Soil	MKNLGIRLYRYIAIRMGHMLHHVSAVLDAIMPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0065704_100582912	3300005289	Switchgrass Rhizosphere	MKNISIWLYRYMAIHMDHMRQHVSAMLDAMMPAPVSRPXLQRVRTPVSPSLNDIXLRNDFLTPWI*
Ga0065705_108229012	3300005294	Switchgrass Rhizosphere	MKNVGIWLYCHMAIHTDLMLHHMVTVLDAMMPAPVSRPALQRVRTPVSPSLNDIHLRSDFLTPWI*
Ga0065707_100319703	3300005295	Switchgrass Rhizosphere	MKNISVWLYRYMAIHMDHMRHHVSAMLDAMMPAPVSRPALQRVRTPVSPSLNDIHLRSDFLTPWI*
Ga0066388_1012986874	3300005332	Tropical Forest Soil	YRYMAMHVDHMLHHMLAMLDAMKPDPVPRPALQRVRTPVSQSLDDIRFRSDFLMPLI*
Ga0066388_1030452822	3300005332	Tropical Forest Soil	MKNIGIWLYRHMAIHMDHMLYHVLTVLDALMPAPMPRPALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0066388_1041738941	3300005332	Tropical Forest Soil	IWLYRYIAIHVDHMLHDVLSMLDAMMSDPVSRPAFQRVKTSVSPNLSDIRLRSNFLTPWI
Ga0066388_1060224082	3300005332	Tropical Forest Soil	MKEIGIWLYRYMAMHVAHMLHHMLAMLDAMRPDPVPRLALQRVRTPVSPSLNDIRFRSDFLMPWI*
Ga0070705_1008018012	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKNIGIWLYRYIAIHENHMLHHVWAMLDAMTPSPMYRPALQRVRTPVFPNLSDTRLRSDFLTPWI*
Ga0066692_108198642	3300005555	Soil	MKDLVIWLYRYIAIRMGHVLYHVSAILDALAPSPVSRPALQRVRTPVSPSVNDIRLRSDFLTPWI*
Ga0066698_108798491	3300005558	Soil	MKNLGICLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLRSDFLTPWI*
Ga0066700_105245821	3300005559	Soil	MKNLGIWLYRYMAIRMGHMRHHVSAVLDAIVPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0068859_1029264532	3300005617	Switchgrass Rhizosphere	MRNLGIWLYRYITMHMHHVSAVLDAMMPSSVSKPALQHVRTPASPSVNDIRVRSDFL
Ga0066903_1005665043	3300005764	Tropical Forest Soil	MKNIGIWLYRYMAMHVDHMLHHMLAMLDAMRPDPVPRLALQRVRTPVSPSLNDIRFRSDFLMPWI*
Ga0066903_1059096912	3300005764	Tropical Forest Soil	WLYRYIAIHMDHMRHDVLAMLDAMMPDPLSRPAMQRVRTPMSPSLNDIRLRSDFLTPWI*
Ga0068858_1024071691	3300005842	Switchgrass Rhizosphere	MRNLGIWLYRYITMHMHHVSAVLDAMMPSSVSKPALQHVRTPASPSVNDIRVRSDLLTPWI*
Ga0081455_1000327110	3300005937	Tabebuia Heterophylla Rhizosphere	MKNIGIWLYRYMTIHVDHMLHHVLALLDAMMPAPVSRPALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0081538_100031144	3300005981	Tabebuia Heterophylla Rhizosphere	MKNIGIWLYRYIAIHVDHMLYHMLAMLDARRPALVPRPALQRVRTPVSPSLNDIRLRSDLLTPWI*
Ga0081539_101544322	3300005985	Tabebuia Heterophylla Rhizosphere	MKNLGIWLYRYMTMYMNHGLHHVLAVLDALAPSPMSRPALQRVRTPVSPSVNDIRLRSDFLMPLI*
Ga0075417_102151241	3300006049	Populus Rhizosphere	MKNIDVWLYRYIAIRANHVLTHVSAMLGAMTPSPAYRPALQRVRTPVSPNLNDIRLRSDLLTPWI*
Ga0066660_102358733	3300006800	Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLRSDFLTPWI*
Ga0075428_1000287276	3300006844	Populus Rhizosphere	MKQIGILLYRYMAIHMDHLLHHVLTALDAMMPALVSRPALQHVRTPVSPSLNDIRLRSDFLTPWI*
Ga0075428_1000925423	3300006844	Populus Rhizosphere	MKNIDIWLYRYIAIHENHMLHHVWAMLDAMTPSPMYRPALQRVRTPVFPNLSDTRLRSDFLTPWI*
Ga0075428_1027617861	3300006844	Populus Rhizosphere	MKNIGFWLYRYMAIHINDALHHVWVMLDAMTPSPMYRPASQHVRTPVSPNLSDIRLRSDFLT
Ga0075425_1025167741	3300006854	Populus Rhizosphere	MKNIGIWLYRYIAIHTNHVRHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRRRSDVLTPLI*
Ga0075434_1018194782	3300006871	Populus Rhizosphere	MKNIGIWLYRYMAIHVNHMLHHVLAGLRAMTPSPVSRPALQRVRTPVSPSVNDIRLRSDFLTPWI*
Ga0075424_1010765963	3300006904	Populus Rhizosphere	NIGIWLYRYIAIHTNHVRHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRRRSDVLTPLI*
Ga0075419_102588671	3300006969	Populus Rhizosphere	HENHMLHHVWAMLDAMTPSPMYRPALQRVRTPVFPNLSDTRLRSDFLTPWI*
Ga0066710_1008304351	3300009012	Grasslands Soil	MKDIGIWLYRYMAIHMNHMLHHVLAVLDALAPSPVSRPVPQRVRTSVSPSVNDIRLRSDFLTPWI
Ga0099830_103402632	3300009088	Vadose Zone Soil	MKNIVIWLYRYMAIHANQMLHHMLAMPDAMTPSPIYRPALQRVRTPMASSVNDIRLRSDFLTPWI*
Ga0099827_100540633	3300009090	Vadose Zone Soil	MKNIVIWLYRYMAIHANQMLHHMLAMPDAMTPSPIYRPALQRVRTPMSPSVNDIRLRSDFLTPWI*
Ga0111539_121077272	3300009094	Populus Rhizosphere	MKNISVWLYRYMAIHMDHMLHHVLAPLDAMMPDPVSRPALQRVRTPVSPHLNDIRLRSDFLTPWI*
Ga0105245_130776402	3300009098	Miscanthus Rhizosphere	MRNLGIWLYRYITMHMHHVSAVLDAMMPSSVSKPALQHVRTPASPSVNDIRVRS
Ga0075418_106567583	3300009100	Populus Rhizosphere	MKNIVFWLYRYMAIHINDALHHVWVMLDAMTPSPMYRPASQHVRTPVSPNLSDIRLRSDFLTPWI*
Ga0066709_1027016102	3300009137	Grasslands Soil	MEKLGIWLYRYIAMYANHALHHVLAVLDSLAPSPVYRPALQCVRTPVSPSVNDIRLRSDFLMPWI*
Ga0066709_1029851882	3300009137	Grasslands Soil	MKSIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDVLTPLI*
Ga0114129_101906972	3300009147	Populus Rhizosphere	MKKLGVWLYRYMAIRMGHMLHRVLAMLDAMTPSPVSRPALQHVRTPVSPNLNDIRLRSEWRFLESNR*
Ga0114129_104531732	3300009147	Populus Rhizosphere	MKNIVFWLYRYMAIHMDHMLHHVLAPLDAMMPDPVSRPALQRVRTPVSPHLNDIRLRSDFLTPWI*
Ga0114129_115042762	3300009147	Populus Rhizosphere	MKNLGIWLYRYMAIHMNDGLHHVLAVLEALAPSPMSKPALQRVRTSVSPSVNDIRLRSDFLMPWM*
Ga0111538_102668701	3300009156	Populus Rhizosphere	LYRYMAIHMDHLLHHVLTALDAMMPALVSRPALQHVRTPVSPSLNDIRLRSDFLTPWI*
Ga0111538_117296812	3300009156	Populus Rhizosphere	LTLWKEKFLMKNIGIWLYRYIAIHENHMLHHVWAMLDAMTPSPMYRPALQRVRTPVFPNLSDTRLRSDFLTPWI*
Ga0075423_125880432	3300009162	Populus Rhizosphere	MKKLGVWLYRYMAIRMGHMLHRVLAMLDAMTPSPVSRPALQHVRTPVPPSVSDVRLRSDFLTPVI*
Ga0105249_103333682	3300009553	Switchgrass Rhizosphere	MKNLGIWLYRYMAIHVDHMLHHVLTVLDAMMPAPVSRPALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0126374_109298942	3300009792	Tropical Forest Soil	MKEIGIWLYRYMAMHVDHMLHHMLAMLDAMRPDPVPRLALQRVRTPVSPSLNDIRFRSDFLTPWI*
Ga0126374_109487092	3300009792	Tropical Forest Soil	WLYHYIAIHMAPMLHHVLSLLDALMPAPVPRPALQRVKTPVSPSLNDIRLRSDFLTPWI*
Ga0126384_102522004	3300010046	Tropical Forest Soil	MKNIVIWLYRYTFMHMDHMRHYMLAMLNAMRPDPVPRPALQRVRTPVSPSLNDIRFRSDFLMPWI*
Ga0126384_102587673	3300010046	Tropical Forest Soil	MKKLGIWLYRYMAIRMGHMLYHVSAMLDPMMPSPVSRPALQRVRTPVSPSVNDIRLRSDFLTPWI*
Ga0126384_106922152	3300010046	Tropical Forest Soil	MKNIGIWLYRHMAIHMDHMLHHVLTTLDALMPAPVPRPALQRVKTPVSPSLNDIRLRSDFLTPWI*
Ga0126382_107247532	3300010047	Tropical Forest Soil	MKNIGIWLYRHMAIHVDHMLYHVLTVLDALMPAPMPRPALQRVRTPVSPSLNDIRLRSDLLTPWI*
Ga0127432_1136721	3300010067	Grasslands Soil	MKNIDIWLYRYIAIHANYMWHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRLRSDFLTPWI*
Ga0127442_1356662	3300010068	Grasslands Soil	MKNIGIWLYRYMAIHMNHMLHHVLAMLDAMIPTPVSRPVPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0127441_1111222	3300010070	Grasslands Soil	MKNIGIWLYRYMAIHMDHMLHHVLAMLDAMIPTPVSRPVPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0127457_10228602	3300010081	Grasslands Soil	MKNLGIWLYRYMAIHVNHRLHHVLAVLDSLAPSPVYRPALQRVRTHVPPSVNDIRLRSDFLRPLI*
Ga0127492_10653682	3300010087	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0127475_11132892	3300010095	Grasslands Soil	MKSIVIWLYPYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDFLTPLI*
Ga0127463_10387462	3300010098	Grasslands Soil	MKNIGIWLYRYMAIHMDHMLHHVLAMLDAMIPTPVSRPMPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0127450_10925122	3300010099	Grasslands Soil	MKSIVIWLYCYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDFLTPLI*
Ga0127453_10017472	3300010102	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDALAPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0127500_10194092	3300010103	Grasslands Soil	MKSLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLRSDFLRPLI*
Ga0127500_10355332	3300010103	Grasslands Soil	MKNIVIWLYRYMAIHMHQMLDALAPSPMYRPAPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0127470_10088342	3300010105	Grasslands Soil	MKNIDIWLYRYIVIHANYMRHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRLRSDFLTPWI*
Ga0127470_11207652	3300010105	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLRSDFLRLGFRNIAIPL*
Ga0127494_10943491	3300010107	Grasslands Soil	MNHMLHHVLAVLDALAPSPVSRPVPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0127474_10750012	3300010108	Grasslands Soil	MKSIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDFLTPLI*
Ga0127444_10041842	3300010113	Grasslands Soil	MKNIDIWLYRYMAIHMDHMLHHVLAMLDAMIPTPVSRPVPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0127460_10971171	3300010114	Grasslands Soil	MKNLGIWLYRYMVIHMHHRLHHVLAVLDALAPSPVYRPALQRVRTPVSPSLNAIRLRSDFLMPWI*
Ga0127452_10121061	3300010119	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAILPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0127451_11123961	3300010120	Grasslands Soil	MKNLGIWLYRYIAIRMGHMLHHASAVLDTIMPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTLWI*
Ga0127451_11279212	3300010120	Grasslands Soil	MKNLGIWLYRYMAIHMNHRLHHVLAVLDSLAPYPVYRPALQRLRTPVPPSVNDIRLRSDFLRPLI*
Ga0127479_11380332	3300010123	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLHHVSAVLDAIMPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0127498_10025551	3300010124	Grasslands Soil	MKNIGIWLYRYMAIHMDHMLHHVLAMLDAMIPTPVSSPMPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0127486_11336772	3300010128	Grasslands Soil	MKNIGIWLYRYMAIHMDHMLHHVLAMLDTMMPAPVSRLALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0127486_11597761	3300010128	Grasslands Soil	MKNLGIWLYRYMAIHMNHRLHHVLAVLDSLAPSPVYRPALQRVRTHVPPSVNDIRLRSDFLRPLI*
Ga0127484_11560122	3300010134	Grasslands Soil	MKNLGIWLYRYIAIRMNHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLRSDFLTPWI*
Ga0127484_11917912	3300010134	Grasslands Soil	MKNIGIWLYRYIAIHANHVRHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRRRSDVLTPLI*
Ga0127447_10672432	3300010136	Grasslands Soil	MKSIVIWLYRYIAIHMDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPCLNDIRLRSDFLTPLI*
Ga0127464_11513112	3300010139	Grasslands Soil	MKNLGIWLYRYIAIRMGHMLHHASAVLDTIMPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0127456_11946482	3300010140	Grasslands Soil	MKNLGIWLYRYMAIRMGHMLHRVSAVLDALAPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0127499_11126342	3300010141	Grasslands Soil	MKIIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0127483_11720982	3300010142	Grasslands Soil	MKNLGIWLYRYMAIHVNHRLHHVLAVLDSLAPSPVYRPALQRVKTHVPPSVNDIRLRSDFLTPWI*
Ga0127483_11815772	3300010142	Grasslands Soil	MKRIVIWLYCYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDFLTPLI*
Ga0126370_113327262	3300010358	Tropical Forest Soil	MKEIGIWLYRYMAMHVDHMLHHMLAMLDAMRPDPVPRLALQRVRTPVSPSLDDIRFRSDFLMPWI
Ga0126376_102097362	3300010359	Tropical Forest Soil	MKNIGIWLYRYMVMHVDHMRHHMLAMLDAMRPDPVPRPALQRVRTPVSPSLDDIRFRSDFLMPWI*
Ga0126376_103717193	3300010359	Tropical Forest Soil	MKKTDIWLYRYMAIHMDHILHRVLTMLDAMMPAQVSRPALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0126372_110416422	3300010360	Tropical Forest Soil	MKRIVIWLYSYMAMHMGHMLHHMLAMLDAMRPDPVPRPALQRVRTPVSPSLNDIRFRSDFLMPWI*
Ga0126372_118236072	3300010360	Tropical Forest Soil	MKNIGTWLYRYIAIHMDHMLYDVLAMLDAMMPDPLSRPALQRVRTPMSPSLNDIRLRSDFLTPWI*
Ga0126372_120838191	3300010360	Tropical Forest Soil	MKNIGIWLYRYMAMHVDHILAMLDAMLSDPVPRPALQRVRTSVSPSLSDVRLSSEFLTPGI*
Ga0126377_109629692	3300010362	Tropical Forest Soil	MKSIGILLYLYMAMHVDHMLYHMLAMLDAMRPDPVPRPALQRVRTPVSPSLNDIRFRSDFLTPWI*
Ga0126377_135479242	3300010362	Tropical Forest Soil	MKNIGIWLYRHMAIHMDHMLHHVLTTLDALMPAPMPRPALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0126379_127829412	3300010366	Tropical Forest Soil	MKNIGIWLYRYIAIHANYVLPHVWAMLGAMTPSPAYRPALQRVRTPVSLNLSDIRLRSDFLTPWI*
Ga0126383_100217273	3300010398	Tropical Forest Soil	MKNIGIWLYRYMAMHVGHILAMLDAMLSDPVPRPALQRVRTSVSPSLSDVRLSSKFLTPGI*
Ga0126383_102946233	3300010398	Tropical Forest Soil	MKNLGIWLYRYIAIHMGYTLHHVSARLDAMAPSPVSKPALQRVRTPVSPSVNDIRLRSDFLTPWI*
Ga0126383_114213072	3300010398	Tropical Forest Soil	MKNLGIWLYRYMTIRMDHMLHHVSTMLDAMAPSPMSRPALQRVRTSVSPSVNDIRLRSDFLMPWM*
Ga0138112_10295752	3300010905	Grasslands Soil	MKSIDIWLYRYIAIHANYMWHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRRRSDVLTPLI*
Ga0105246_105523002	3300011119	Miscanthus Rhizosphere	MKNLGIWLYRYITMHMHHVSAVLDAMMPSSVSKPALQHVRTPASPSVNDIRVRSDLLTPWI*
Ga0137393_108462692	3300011271	Vadose Zone Soil	MKNIVIWLYRYMAIHANQMLHHMLAMPDAMTPSPIYRPVLQRVRTPMSPSVNDIRLRSDFLTPWI*
Ga0137383_102230772	3300012199	Vadose Zone Soil	MKKLGVWLYRYMAIRMSHMRHHVWAVLDAIMPSPVSRPAVQRVSRPVSPSVNDIRLRSDFLTPWI*
Ga0137381_111880722	3300012207	Vadose Zone Soil	MKNIVIWLYRYMAIHMHQILDALTPCPIYRPVPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0137379_103157123	3300012209	Vadose Zone Soil	MKKLGVWLYRYMAIRMSHMQHHVSAVLDAIMPSPVSRPALQRVSRPVSPSVNDIRLRSDFLTPWI*
Ga0137378_1002160911	3300012210	Vadose Zone Soil	MKKLGVWLYRYMAIRMSHMRHHVSAVLDAIMPSPVSRPALQRVSRPVSPSVNDIRLRSDFLTPWI*
Ga0150985_1013156842	3300012212	Avena Fatua Rhizosphere	MKNIGIWLYRYIAMHANYVRYHVWAMLGAMTPSLVYRPALQRARTPVSPNLSDIRLRSDLLAPWI*
Ga0137387_105285062	3300012349	Vadose Zone Soil	MKDLVIWLYRYMAIRMSHMQHHVSAVLDAIMPSPVSRPALQRVSRPVSPSVNDIRLRSDFLTLWM*
Ga0137386_105263512	3300012351	Vadose Zone Soil	MKNIVIWLYRYMAIHISHMLHPVLAGLNAMTPSPVSRPALQRVSRPVSPSVNDIRLRSDFLTPWI*
Ga0137385_101264133	3300012359	Vadose Zone Soil	MKKLGVWLYRYMAIRMSHMQHHVSAVLDAIMPSPVSRPALQRVSRPVSPSVNDIRLRSDFLTLWM*
Ga0134042_10982782	3300012373	Grasslands Soil	MKNLGIWLYRYMAIHVNHRLHHVLAVLDSLAPYPVYRPALQRLRTPVPPSVNDIRLRSDFLTPLI*
Ga0134042_12328221	3300012373	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLRSD
Ga0134034_10591201	3300012375	Grasslands Soil	MKNIDIWLYRYIAIHANHVRHHVWAMLDAVTPSPVYRPTLQCVRTPMSPSIDDIRRSSDVLMPLI*
Ga0134034_10650792	3300012375	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLRSDFLTPLI*
Ga0134029_11372262	3300012377	Grasslands Soil	MKSIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDFLTPLI
Ga0134025_12353792	3300012378	Grasslands Soil	MKSIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0134038_12327392	3300012382	Grasslands Soil	MKNLGIWLYRYIAIRMGHMLYRVSAVLDALAPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0134033_11337202	3300012383	Grasslands Soil	MKIIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPAMQRVRTPVSPSLNDIRLRSDFLTPLI*
Ga0134023_12825422	3300012385	Grasslands Soil	MKNLGIWLYRYIAIRMGHMLHHASAVLDTIMPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPLI*
Ga0134046_10700702	3300012386	Grasslands Soil	MKNLGIWLYRYMAIHMNHRLHHVLAVLDSLAPSPVYRPALQRLRTPVPPSVNDIRLRSDFLRPLI*
Ga0134030_10053851	3300012387	Grasslands Soil	MKNIDIWLYRYIAIHANYMWHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRRRSDVLMPLI*
Ga0134030_10322002	3300012387	Grasslands Soil	MKNLGIWLYRYIAIRMNHMLYRVSAVLDAIMPSPVSRPALQRVRPPVSPSVNDIRLTSDFLTPWI*
Ga0134031_13132162	3300012388	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPALQRVRTPVAPSVNNIRLRSDFLTPWI*
Ga0134040_11645623	3300012389	Grasslands Soil	FYMKNIGIWLYRYMAIHMDHMLHHVLAMLDAMIPTTVSRPVPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0134052_13121282	3300012393	Grasslands Soil	MKNIGIWLYRYMAIHMDHMRHHVLAMLDTMMPAPVSRLALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0134044_10093342	3300012395	Grasslands Soil	MKNIGIWLYRYMAIHMDHMRHHVLAMLDTMVPSPVSRLALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0134057_10322852	3300012396	Grasslands Soil	MKNIGIWLYRYMAIHMDHMRHHVLAMLEAMMPAPVSRPALQRVRTPVSPSLNAIRLRSDFLMPWI*
Ga0134057_10660543	3300012396	Grasslands Soil	MKNLGICLYRYIAIRMGHMLHHVSAVLDALAPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0134057_13246402	3300012396	Grasslands Soil	MKNIVIWLYRYMAIHMHQILDALTPCPMYRPVPQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0134051_10622842	3300012398	Grasslands Soil	MKSIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPALQRVRTPVSPCLNDIRLRSDFLTPLI*
Ga0134055_11436112	3300012401	Grasslands Soil	MKSIVIWLYRYIAIHVDHMLHHALAMLDAMMSTPVSKPARQRVRTPVSPSLNDIRLRSDFLTPLI*
Ga0134059_10187931	3300012402	Grasslands Soil	MKNIGIWLYRYMAIYMDHMRHHVLAMLDTMMPAPVSRLALQRVRTPVSPSLNDIRLRSDFLTPWI*
Ga0134059_13701603	3300012402	Grasslands Soil	MKNIGIWLYRYMAIHMDHMRHHVLAMLEAMMPAPVSRPAFQRVRTPVSPSLNAIRLRSDFLMPWI*
Ga0134024_10761172	3300012404	Grasslands Soil	MKNLGIRLYRYIAIRMGHMLHHVSVVLDAIMPSPVSRPALQRVRTPVAPSVNDIRLRSDFLTPWI*
Ga0134041_11506722	3300012405	Grasslands Soil	MKNIDIWLYRYIAIHANYMWHHVWAMLGAMTPSPVYRPALQCVRTPMSPSIDDIRRRSDVLTPLI*
Ga0134041_12406943	3300012405	Grasslands Soil	MKNLGIWLYRYIAIRMGHMLHRVSAVLDAIMPSPVSRPALQRGGTPVAPSVNDIRLRSDFLTPWI*
Ga0134053_14067252	3300012406	Grasslands Soil	MKNIVIWLYRYMAIHMHQILDALTPCPMYRPVPQRVRTSVSPSVNDIRLRSDFLTPFI*
Ga0134050_12336222	3300012407	Grasslands Soil	MKNIGIWLYRYIAIHANHVRHHVWAMLDAVTPSPVYRPTLQCVRTPMSPSIDDIRRRSDVLTPLI*
Ga0134050_12500221	3300012407	Grasslands Soil	MKNLGIWLYRYMAIHMNHRLHHVLAVLDSLAPYPVYRPALQRVRTHVPPSVNDIRLRSDFLRPLI*
Ga0134060_15184271	3300012410	Grasslands Soil	MKNIGIWLYRYMAIHMDHMRHHVLAMLDTMMPAPVSRPALQRVRTPVSPSLNAIRLRSDFLMPWI*
Ga0126375_113522172	3300012948	Tropical Forest Soil	MKNLGIWLYRYMTIRMDHMLHHVSTMLDAMAPSPVSRPALQRVRTSVSPSVNDIRLRSDFLTPWI*
Ga0126375_118752752	3300012948	Tropical Forest Soil	MKNIGIWLYRYMVMYVDHMLYHMLAMLDAMRPDPVPRSALQRVRTPVSPSLNDIRFRSDFLTPWI*
Ga0126369_101133692	3300012971	Tropical Forest Soil	MKDIGIWLYRYMAMHVDHMRHHMLAMLDAMRPDPVPRPALQRVRTPVSPSLNDIRFRSDFLMPWI*
Ga0126369_108890893	3300012971	Tropical Forest Soil	MRNLGILLYCYMAIYMSHVLHPVLAMLNAVTSSPAYRPALQRVRTPVSPSVNDIRLRSDFLTPWI*
Ga0126369_112860502	3300012971	Tropical Forest Soil	MKNIGTWLYRYIAIHMDHMLHDVLAMLDAMMPDPLSRPALQRVRTPMSPSLNDIRLRSDFLTPWI*
Ga0163162_130688972	3300013306	Switchgrass Rhizosphere	MKNIGIWLYRYIAIHENHMLHHVWAMLDAMTPSPMYRPALQRVRTPVFPNLSDTRLRSDF
Ga0132258_107546883	3300015371	Arabidopsis Rhizosphere	MKNISIWLYRYMAIYIDHILHDVLTILGAMMPSPMARPGLQRVRTPVSPSLNDIRLRNDFLMPWI*
Ga0132258_123785512	3300015371	Arabidopsis Rhizosphere	MRNLGIWLYRYITMHMHHVSAVLDAMMPSSVSKPALQRVRTPASPSVNDIRVRSDFLTPWI*
Ga0163161_117933062	3300017792	Switchgrass Rhizosphere	MKNLGIWLYRYMAIHVDHMLHHVLTVLDAMMPAPVSRPALQRVRTPVSPSLNDIRLRSDFLTPWI
Ga0066662_114818842	3300018468	Grasslands Soil	MKNLGIWLYRYIAIRMDHMLYRVSAVLDAIMPSPVSRPVPQRVRTSVSPSVNDIRLRSDFLTPWI
Ga0187892_104685722	3300019458	Bio-Ooze	MKKLGIWLYRYMAIRMSDILHGVLAPLDTMEPSPVYRPALHRVRTPVPPSVNDIRLKSDFLTPWI
Ga0207703_122570362	3300026035	Switchgrass Rhizosphere	MRNLGIWLYRYITMHMHHVSAVLDAMMPSSVSKPALQHVRTPASPSVNDIRVRSDLLTPW
Ga0207708_103245412	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKNLGIWLYRYMAIHMDQMLQHLSAVLDAMMPSPVSRPALQRFRTSVSPSVNDLRVRNDFLTPWI
Ga0209814_100624061	3300027873	Populus Rhizosphere	MKNIDVWLYRYIAIRANHVLTHVSAMLGAMTPSPAYRPALQRVRTPVSPNLNDIRLRSDLLTPWI
Ga0209814_103715021	3300027873	Populus Rhizosphere	MKQIGILLYRYMAIHMDHLLHHVLTALDAMMPALVSRPALQHVRTPVSPSLNDIRLRSDFLTPWI
Ga0209283_101133132	3300027875	Vadose Zone Soil	MKNIVIWLYRYMAIHANQMLHHMLAMPDAMTPSPIYRPALQRVRTPMSPSVNDIRLRSDFLTPWI
Ga0209590_102745853	3300027882	Vadose Zone Soil	LILWKEKFFMKNIVIWLYRYMAIRVNQMLHHMLAMPDAMMPSPIYRPALQRVRTPMSPSVNDIRLRSDFLTPWI
Ga0209382_100372626	3300027909	Populus Rhizosphere	MKNIGIWLYRYIAIHENHMLHHVWAMLDAMTPSPMYRPALQRVRTPVFPNLSDTRLRSDFLTPWI
Ga0247827_107642882	3300028889	Soil	MKNMGIWLYCHMAIHTDLMLHHMVTVLDAMMPAPVSRPALQRVRTPVSPSLNDIRLRSDFLTPWI
Ga0247830_102797391	3300033551	Soil	DHMLHDVLAMLDAMMPDPVSRPALQRVRTPVSPDLNDIRLRSDFLTPWI
Ga0314780_163245_2_166	3300034659	Soil	MKNISVWLYRYMAIHMDHMLHHVLAPLDAMMPDPVSRPALQRVRTPVSPHLNDIR
Ga0314780_194108_2_190	3300034659	Soil	MKDIGVWLYRYITIHVNHMLDHVLAMLDAMMPAPVAKPALQRVRTPVSPNLNDIRLRSDFLMP
Ga0314782_099601_387_584	3300034661	Soil	MKDIGVWLYRYMAMHMDHMLYHVLAMLDAMMPAPVARPALQRVRTPVSPNLNDIRLRSDFLTPWV
Ga0314783_092788_393_590	3300034662	Soil	MKDIGVWLYRYMAMHMDHMLYHVLAMLDAMMPAPVARPALQRVRTPVSPNLNDIRLRSDFLTPLV
Ga0314796_139355_377_556	3300034671	Soil	WLYRYIAMHMDHMLYHVLAMLDAMMPAPVARPALQRVRTPVSPNLNDIRLRSDFLTPWV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038604

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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