Metagenome / Metatranscriptome Family F038581

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038581
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	46 residues
Representative Sequence	MSRRSSRRGRPYQPLPQRRVNWGARLLVVFVAFILVAGFAILTFAR
Number of Associated Samples	130
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.48 %
% of genes near scaffold ends (potentially truncated)	19.39 %
% of genes from short scaffolds (< 2000 bps)	82.42 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (21.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.758 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.08% β-sheet: 0.00% Coil/Unstructured: 68.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF00903	Glyoxalase	13.94
PF13561	adh_short_C2	7.88
PF05163	DinB	7.88
PF03641	Lysine_decarbox	4.24
PF12681	Glyoxalase_2	1.82
PF04209	HgmA_C	1.21
PF01035	DNA_binding_1	1.21
PF00300	His_Phos_1	0.61
PF01425	Amidase	0.61
PF07179	SseB	0.61
PF12840	HTH_20	0.61
PF01022	HTH_5	0.61
PF00005	ABC_tran	0.61
PF08327	AHSA1	0.61
PF02481	DNA_processg_A	0.61
PF10079	BshC	0.61
PF00293	NUDIX	0.61
PF02511	Thy1	0.61
PF02805	Ada_Zn_binding	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	7.88
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	4.24
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.21
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.21
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.21
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	1.21
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.61
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.61
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	0.61

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.39 %
Unclassified	root	N/A	0.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.39 %
Unclassified	root	N/A	0.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.39 %
Unclassified	root	N/A	0.61 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.61 %
Unclassified	root	N/A	0.61 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	72.12 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.61 %
Unclassified	root	N/A	0.61 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	71.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.61 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %
Unclassified	root	N/A	0.61 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	71.52 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.61 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %
Unclassified	root	N/A	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig187797	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig63577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig68354	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300000956\|JGI10216J12902_106358384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2292	Open in IMG/M
3300001535\|A3PFW1_10096735	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300001535\|A3PFW1_10137459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	814	Open in IMG/M
3300002120\|C687J26616_10012367	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300002121\|C687J26615_10101602	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300002122\|C687J26623_10029758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1453	Open in IMG/M
3300002407\|C687J29651_10283299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300002503\|C687J35164_10173323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300003203\|JGI25406J46586_10093178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	906	Open in IMG/M
3300003349\|JGI26129J50193_1018476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300003987\|Ga0055471_10060380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1046	Open in IMG/M
3300003993\|Ga0055468_10257985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300003998\|Ga0055472_10086757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	857	Open in IMG/M
3300004002\|Ga0055477_10203961	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300004002\|Ga0055477_10350483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300004013\|Ga0055465_10247193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300004020\|Ga0055440_10212876	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300004114\|Ga0062593_100356458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1282	Open in IMG/M
3300004114\|Ga0062593_100541390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1092	Open in IMG/M
3300004114\|Ga0062593_102243529	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300004156\|Ga0062589_102118298	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300004157\|Ga0062590_101657654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	649	Open in IMG/M
3300004463\|Ga0063356_104734505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300004463\|Ga0063356_104861432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300004479\|Ga0062595_100069317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1722	Open in IMG/M
3300004479\|Ga0062595_101281878	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005093\|Ga0062594_101328487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	724	Open in IMG/M
3300005172\|Ga0066683_10559211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	697	Open in IMG/M
3300005294\|Ga0065705_10220441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1321	Open in IMG/M
3300005294\|Ga0065705_10649230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300005440\|Ga0070705_100003258	All Organisms → cellular organisms → Bacteria	7979	Open in IMG/M
3300005440\|Ga0070705_100936961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300005444\|Ga0070694_100833166	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005445\|Ga0070708_100092274	All Organisms → cellular organisms → Bacteria	2759	Open in IMG/M
3300005445\|Ga0070708_100402395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1291	Open in IMG/M
3300005445\|Ga0070708_100731031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	931	Open in IMG/M
3300005467\|Ga0070706_101780213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	560	Open in IMG/M
3300005471\|Ga0070698_100024732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6263	Open in IMG/M
3300005556\|Ga0066707_10304093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1044	Open in IMG/M
3300005557\|Ga0066704_10127814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1691	Open in IMG/M
3300005558\|Ga0066698_10074824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2192	Open in IMG/M
3300005586\|Ga0066691_10480863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300005875\|Ga0075293_1069737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300005876\|Ga0075300_1046459	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005878\|Ga0075297_1031008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300005879\|Ga0075295_1012670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	909	Open in IMG/M
3300005886\|Ga0075286_1004199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1636	Open in IMG/M
3300006854\|Ga0075425_100010252	All Organisms → cellular organisms → Bacteria	9991	Open in IMG/M
3300006894\|Ga0079215_10360115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	837	Open in IMG/M
3300007740\|Ga0104326_118295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1435	Open in IMG/M
3300009012\|Ga0066710_100312229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2308	Open in IMG/M
3300009137\|Ga0066709_100773927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1388	Open in IMG/M
3300009162\|Ga0075423_10366099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1512	Open in IMG/M
3300009162\|Ga0075423_11579340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300009166\|Ga0105100_10267961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1022	Open in IMG/M
3300009553\|Ga0105249_13454205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300010041\|Ga0126312_11381748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300010391\|Ga0136847_11158873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1153	Open in IMG/M
3300012010\|Ga0120118_1104124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300012014\|Ga0120159_1056199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1223	Open in IMG/M
3300012019\|Ga0120139_1139290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	627	Open in IMG/M
3300012204\|Ga0137374_10169496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1922	Open in IMG/M
3300012355\|Ga0137369_10173223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1693	Open in IMG/M
3300012360\|Ga0137375_10305333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1437	Open in IMG/M
3300012914\|Ga0157297_10307867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300012931\|Ga0153915_10001148	All Organisms → cellular organisms → Bacteria	24417	Open in IMG/M
3300012931\|Ga0153915_10427547	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300013294\|Ga0120150_1060097	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	729	Open in IMG/M
3300013772\|Ga0120158_10420306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300015209\|Ga0167629_1025849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2109	Open in IMG/M
3300015253\|Ga0180081_1041928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300015371\|Ga0132258_10123409	All Organisms → cellular organisms → Bacteria	6158	Open in IMG/M
3300015371\|Ga0132258_10981110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2135	Open in IMG/M
3300015373\|Ga0132257_100384207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1704	Open in IMG/M
3300015374\|Ga0132255_100329638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2205	Open in IMG/M
3300017659\|Ga0134083_10079692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1270	Open in IMG/M
3300017997\|Ga0184610_1077218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1027	Open in IMG/M
3300017997\|Ga0184610_1125617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	829	Open in IMG/M
3300018052\|Ga0184638_1206880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	689	Open in IMG/M
3300018052\|Ga0184638_1228815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300018053\|Ga0184626_10172296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	919	Open in IMG/M
3300018053\|Ga0184626_10408448	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300018063\|Ga0184637_10204795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1210	Open in IMG/M
3300018063\|Ga0184637_10225595	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300018071\|Ga0184618_10000731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7765	Open in IMG/M
3300018071\|Ga0184618_10030474	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300018075\|Ga0184632_10003645	All Organisms → cellular organisms → Bacteria	6411	Open in IMG/M
3300018076\|Ga0184609_10577780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300018082\|Ga0184639_10395188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	715	Open in IMG/M
3300018429\|Ga0190272_13198690	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300018469\|Ga0190270_12938405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300019255\|Ga0184643_1384494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300019888\|Ga0193751_1000641	All Organisms → cellular organisms → Bacteria	25854	Open in IMG/M
3300020059\|Ga0193745_1072969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	748	Open in IMG/M
3300021080\|Ga0210382_10056643	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300021344\|Ga0193719_10325345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300022213\|Ga0224500_10021795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2738	Open in IMG/M
3300022214\|Ga0224505_10050323	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300025002\|Ga0209001_1072612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300025159\|Ga0209619_10445859	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300025160\|Ga0209109_10004099	All Organisms → cellular organisms → Bacteria	7924	Open in IMG/M
3300025160\|Ga0209109_10016556	All Organisms → cellular organisms → Bacteria	3967	Open in IMG/M
3300025160\|Ga0209109_10331744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	720	Open in IMG/M
3300025318\|Ga0209519_10727680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300025325\|Ga0209341_10081844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2727	Open in IMG/M
3300025325\|Ga0209341_10257246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1447	Open in IMG/M
3300025325\|Ga0209341_10758707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300025538\|Ga0210132_1077481	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300025796\|Ga0210113_1113170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300025817\|Ga0210144_1186894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300025885\|Ga0207653_10420548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300025912\|Ga0207707_11186750	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300025922\|Ga0207646_10026551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5284	Open in IMG/M
3300025922\|Ga0207646_11528678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300025932\|Ga0207690_11765245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300026089\|Ga0207648_10372112	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300026089\|Ga0207648_11689118	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300026535\|Ga0256867_10025069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2528	Open in IMG/M
3300027526\|Ga0209968_1083997	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300027636\|Ga0214469_1044530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1400	Open in IMG/M
3300027647\|Ga0214468_1030950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1431	Open in IMG/M
3300027650\|Ga0256866_1058731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1022	Open in IMG/M
3300028708\|Ga0307295_10075927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	888	Open in IMG/M
3300028717\|Ga0307298_10202195	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300028722\|Ga0307319_10133038	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300028771\|Ga0307320_10169826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	848	Open in IMG/M
3300028784\|Ga0307282_10099989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1345	Open in IMG/M
3300028792\|Ga0307504_10001246	All Organisms → cellular organisms → Bacteria	4971	Open in IMG/M
3300028793\|Ga0307299_10061817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1386	Open in IMG/M
3300028807\|Ga0307305_10435564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300028814\|Ga0307302_10067640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1679	Open in IMG/M
3300028819\|Ga0307296_10194907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1099	Open in IMG/M
3300028824\|Ga0307310_10344706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	731	Open in IMG/M
3300028828\|Ga0307312_10216926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1232	Open in IMG/M
3300028828\|Ga0307312_10330637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	995	Open in IMG/M
3300028828\|Ga0307312_10365894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	944	Open in IMG/M
3300028828\|Ga0307312_11171691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300028878\|Ga0307278_10315900	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300028884\|Ga0307308_10568997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300030006\|Ga0299907_10073378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2772	Open in IMG/M
3300030006\|Ga0299907_10524071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	933	Open in IMG/M
3300030006\|Ga0299907_10971487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300030619\|Ga0268386_10797162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	604	Open in IMG/M
3300031229\|Ga0299913_10009031	All Organisms → cellular organisms → Bacteria	8795	Open in IMG/M
3300031229\|Ga0299913_10288539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1626	Open in IMG/M
3300031229\|Ga0299913_10778980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	931	Open in IMG/M
3300031716\|Ga0310813_11083452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300031740\|Ga0307468_102433648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300031949\|Ga0214473_11037980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	862	Open in IMG/M
3300031965\|Ga0326597_11322305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300031965\|Ga0326597_12014785	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300032061\|Ga0315540_10270651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300032075\|Ga0310890_11327734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300032163\|Ga0315281_10005598	All Organisms → cellular organisms → Bacteria	17962	Open in IMG/M
3300032163\|Ga0315281_10048394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5201	Open in IMG/M
3300033407\|Ga0214472_10007440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11458	Open in IMG/M
3300033417\|Ga0214471_10001362	All Organisms → cellular organisms → Bacteria	19415	Open in IMG/M
3300033433\|Ga0326726_10356027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1382	Open in IMG/M
3300033433\|Ga0326726_11234429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300033812\|Ga0364926_149869	Not Available	501	Open in IMG/M
3300033814\|Ga0364930_0188474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300034773\|Ga0364936_107331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.30%
Host-Associated	Host-Associated	9.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.09%
Aquatic	Environmental → Aquatic	21.21%
Plants	Host-Associated → Plants	9.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.06%
Sediment	Environmental → Aquatic → Sediment	8.48%
Marine	Environmental → Aquatic → Marine	7.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.03%
Floodplain	Environmental → Terrestrial → Floodplain	1.82%
Peat	Environmental → Terrestrial → Peat	1.21%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.91%
Loam	Environmental → Terrestrial → Soil → Loam	12.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.21%
Sediment	Environmental → Aquatic → Marine → Sediment	1.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.21%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.06%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.85%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.82%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.21%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.21%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.85%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.64%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.21%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.21%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.21%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.21%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.21%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.61%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.61%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.61%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003349	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004002	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007740	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-9-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025002	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 2 (SPAdes)	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025817	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032061	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_03421640	2124908032	Soil	MSRRSSRRGRPYQPLPDHRSNWGAKLVVVFVAFILVAGFAILTFAR
A5_c1_00998800	2124908044	Soil	VSRRSSRRGRPYQPLPDRRSNWGAKLVVIFVALILVAGFAILTFAR
A5_c1_00537900	2124908044	Soil	MSRRSQRRGRPYQPLPERHINWGARLTVVVIAFILVIGFAILAFAR
JGI10216J12902_1063583842	3300000956	Soil	VTRRRQRGRPYQPLPARHVNWGARLLVVFVAFVLVAGFAILTFAR*
A3PFW1_100967351	3300001535	Permafrost	GRPYQPLPARQVNWGARLVIVVVAVVLVAGFAILSFAR*
A3PFW1_101374591	3300001535	Permafrost	MSRRSQRRGRPYQPLPARQVNWGARLVIVFVAFVLVAGFAILSFAR*
C687J26616_100123676	3300002120	Soil	MSRRSSRRGRPYQPLPRRRVNWGARLLVVFVAFILVAGFAILTFAR*
C687J26615_101016023	3300002121	Soil	MSRRSSRRGRPYQPLPVRRVNWVARLVVVFVAFILVAGFAILTFAR*
C687J26623_100297584	3300002122	Soil	MSRRSSRRGRPYQPLPRRRVNWGARLLVVFVAFILVAGFAILTFA
C687J29651_102832992	3300002407	Soil	MSRRSSRRGRPYQPLPRRRVNWGARLLVVFVAFILVAGFAIL
C687J35164_101733232	3300002503	Soil	MSRRSSRRGRPYQPLPQRRVNWGARLLVVFVAFILVAGFAILTFAR*
JGI25406J46586_100931782	3300003203	Tabebuia Heterophylla Rhizosphere	MTRRRRGRPYQPYPVRSVNWGARLIIVAVGFIMIVGFAILTFTH*
JGI26129J50193_10184761	3300003349	Arabidopsis Thaliana Rhizosphere	MSRRSSRKGRPYQPLPVRHTNWGARLVIISVAFILVAGFAILSFSR*
Ga0055471_100603802	3300003987	Natural And Restored Wetlands	MSRRNRKRGRSYQPYPERNVNWGARLMIVAVAFIMVAGIAILTFAR*
Ga0055468_102579852	3300003993	Natural And Restored Wetlands	MSRSRRSGRRGRPYQPYPERRTNWAARLIIVVVAFIMVAGIAVLTFTQ*
Ga0055472_100867571	3300003998	Natural And Restored Wetlands	MSRRSGRKGRPYQPYPERRTNWAARLVIVVVAFIMVAGIAVLTFIR*
Ga0055477_102039612	3300004002	Natural And Restored Wetlands	MSRRNRRGRVYQPLPKRQVNWGARLLIVVIGFVMVAGIAILAFAR*
Ga0055477_103504832	3300004002	Natural And Restored Wetlands	VSRRGNRRGRPYQPYPDRRVNWGARLLIVAIAFVMVAGIAILAFAR*
Ga0055465_102471931	3300004013	Natural And Restored Wetlands	MTRRRGRGRPYQPYPERRTNWGARLLVVFVGFVLIAGFAILTFAR*
Ga0055440_102128762	3300004020	Natural And Restored Wetlands	VSRRSSRRGRPYQPLPPRRTNWGARLVIVFVAFILVAGFAVLTFVK*
Ga0062593_1003564583	3300004114	Soil	MSRRSQRRGRPYQPLPTRRVNWGARLVIISVAFVLVAGFAILSFAR*
Ga0062593_1005413902	3300004114	Soil	LTRRRRGRPYQPYPTRSVNWGARLLIVVIGFIMVLGIAILTFTR*
Ga0062593_1022435292	3300004114	Soil	MSRRSQRRGRPYQPLPERQVNWGARLVIIFVAFVLIAGFAILSFAR*
Ga0062589_1021182981	3300004156	Soil	MSRRSSRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFSR*
Ga0062590_1016576542	3300004157	Soil	LTRRRRGRPYQPYPTRSVDWGARLLIVVIGFIMVLGIAILTFTR*
Ga0063356_1047345052	3300004463	Arabidopsis Thaliana Rhizosphere	MSRRSNRRGRPYQPLPTRRVNWGARLVIIFVAFVLVAGFAILSFAR*
Ga0063356_1048614321	3300004463	Arabidopsis Thaliana Rhizosphere	RRRRGRPYQPYPTRSVNWGARLLIVVIGFIMVVGIAILTFTR*
Ga0062595_1000693172	3300004479	Soil	MSRRSPRRGRPYQPLPARSVNWGARLVIVVVAVVLVAGFAILSFAR*
Ga0062595_1012818782	3300004479	Soil	VGPMSRRSQRRGRPYQPLPTRRVNWGARLVIISVAFVLVAGFAILSFAR*
Ga0062594_1013284872	3300005093	Soil	MSRRSQRRGRPYQPLPTRRVNWGARLVIVIVAFVLVAGFAILSFAR*
Ga0066683_105592112	3300005172	Soil	VSRRSPRRGRPYQPLPERRGSWVAKLVVLFVAFILVVGFAILTFSK*
Ga0065705_102204413	3300005294	Switchgrass Rhizosphere	HSRGADDPVPAPPRVGPMSRRSSRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFSR*
Ga0065705_106492301	3300005294	Switchgrass Rhizosphere	MSRRSQRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFAR*
Ga0070705_1000032584	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSSRKGRPYQPLPERRVNWGARLVIIFVAFILVAGFAILSFAR*
Ga0070705_1009369612	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSSRRGRPYQPLPERRVNWGARLVIVVVAFILVAGIAVLSFAR*
Ga0070694_1008331661	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	APRVGPMSRRSSRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFSR*
Ga0070708_1000922745	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSPRRGRPYQPLPTRTVNWGARLVIVIVAVVLVAGFAILSFAR*
Ga0070708_1004023952	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSRRSTRKGRPYQPLPERRGSWVAKIVVLFVAFILVIGFAILTFAK*
Ga0070708_1007310312	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSPRRGRPYQPLPERRGSWVAKLVVLFVAFILVVGFAVLTFSR*
Ga0070706_1017802131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSSRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFAR*
Ga0070698_1000247325	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSSRRGRPYQPLPERRVNWGARLVIVVVAFILVAGFAILSFAR*
Ga0066707_103040932	3300005556	Soil	VSRRSARRGRPYQPLPERRGNWVAKLVVLFVAFILVVGFAVLTFSR*
Ga0066704_101278142	3300005557	Soil	VSRRSARRGRPYQPLPERRGNWAAKLVVLFVAFILVVGFAVLTFSR*
Ga0066698_100748244	3300005558	Soil	MSRRSPRRGRPYQPLPERRGSWVAKLVVLFVAFILVVGFAILTFSK*
Ga0066691_104808632	3300005586	Soil	RGRPYQPLPERRGNWAAKLVVLFVAFILVVGFAVLTFSR*
Ga0075293_10697372	3300005875	Rice Paddy Soil	VSRRSQRRGRPYQPLPSRRTNWTARLVVVFVAFILVAGFAILTFAR*
Ga0075300_10464592	3300005876	Rice Paddy Soil	RSQRRGRPYQPLPSRRTNWTARLVVVFVAFILVAGFAILTFAR*
Ga0075297_10310082	3300005878	Rice Paddy Soil	MSRRSNRRGRPYQPLPERHVNWGARLTVVLVALVLVIGFAILTFAR*
Ga0075295_10126702	3300005879	Rice Paddy Soil	VSRRSRRRGRPYQPLPSRRTNWTARLVVVFVAFILVAGFAILTFAR*
Ga0075286_10041991	3300005886	Rice Paddy Soil	MSRRSGRRGRPYQPYPERRVNWGARLLVVFVAFVMIASIAILTFVR*
Ga0075425_1000102524	3300006854	Populus Rhizosphere	MTRRSSRRGRPYQPLPEKRSNWGARLLVLLVAVILVGGFAVLTFTH*
Ga0079215_103601151	3300006894	Agricultural Soil	MSRRRRGRPYQPYPTRNVNWGARLLIVLVGFIMVVGIAILTFTR*
Ga0104326_1182953	3300007740	Soil	VSRRSSRRGRPYQPLPDRRSNWGAKLVVIFVALILVAGFAILTFAR*
Ga0066710_1003122295	3300009012	Grasslands Soil	SRRSPRRGRPYQPLPERRGSWVAKLVVLFVAFILVVGFAILTFSK
Ga0066709_1007739272	3300009137	Grasslands Soil	MSRRSSRRGRPYQPLPVRRVNWAARLVIVVVAVVLVAGFAILSFAR*
Ga0075423_103660992	3300009162	Populus Rhizosphere	MTRRSSRRGRLYQPLPEKRSNWGARLLVLLVAVILVGGFAVLTFTH*
Ga0075423_115793402	3300009162	Populus Rhizosphere	MSRRSSRKGRPYQPLPVRHTNWGARLVIIFVALILVVGFAILSFAR*
Ga0105100_102679612	3300009166	Freshwater Sediment	VGPVSRRSSRKGRPYQPDPEKRVNWVARVLVVAVAFIMIAGFAILTFVR*
Ga0105249_134542052	3300009553	Switchgrass Rhizosphere	MSRRSQRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFSR*
Ga0126312_113817482	3300010041	Serpentine Soil	MSRRRRSGRPYQPYPTRRQNWGARLLIVGIGFVMVIGIAILAFTR*
Ga0136847_111588731	3300010391	Freshwater Sediment	MSRRSSRRGRPYQPLPERRVNWGARLAVVFVTFILVAGFAILTFAR*
Ga0120118_11041242	3300012010	Permafrost	MSRRSSRRGRPYQPLPARQVNWGARLVIVVVAVVLVAGFAILSFAR*
Ga0120159_10561991	3300012014	Permafrost	MSRRSSRRGRPYQPLPARQVNWGARLGIVVVAVVLVAGFAILSFAR*
Ga0120139_11392902	3300012019	Permafrost	APRSHRRGRPSQPLPPSRTNWGARLIVIFVAFILVAGFAILTFTK*
Ga0137374_101694962	3300012204	Vadose Zone Soil	MTRRRQRGRAYQPLPARHVNWGARLLVVFVAFVLVAGFAILTFAR*
Ga0137369_101732233	3300012355	Vadose Zone Soil	RAYQPLPARHVNWGARLLVVFVAFVLVAGFAILTFAR*
Ga0137375_103053331	3300012360	Vadose Zone Soil	MSRRSNRRGRPYQPLPERRVNWAARLVIVIVAFVRVAGFAILTFAR*
Ga0157297_103078672	3300012914	Soil	MSRRSSRKGRPYQPLPVRHTNWGARLVIIFVTFILVAGFAILSFSR*
Ga0153915_1000114823	3300012931	Freshwater Wetlands	MSRRTSRRGRPYQPLPERRTHWGARLVIVFVAFILVAGFAVLTFVK*
Ga0153915_104275472	3300012931	Freshwater Wetlands	VSRRSSRRGRPYQPLPERRTNWGARLVVIFVAFILVAGFAVLTFVK*
Ga0120150_10600972	3300013294	Permafrost	MSRRSQRRGRPYQPLPARQVNWGARLVIIFVAFVLVAGFAILSFAR*
Ga0120158_104203062	3300013772	Permafrost	MSRRSPRRGRPYQPLPERRGNWVAKLVVLFVAFILVVGIAVLAFSR*
Ga0167629_10258491	3300015209	Glacier Forefield Soil	MSRRSQRRGRPYQPLPPSRTNWGARLIVIFVAFILVAGFAILTFTK*
Ga0180081_10419281	3300015253	Soil	MSRRSPRRGRPYQPLPERRVNWGARITVVFVAFILVAGFAILTFAR*
Ga0132258_101234095	3300015371	Arabidopsis Rhizosphere	MTRRRRGRPYQPYPTRRVNWGARIVIVAVGFIMVVGFAILTFTH*
Ga0132258_109811103	3300015371	Arabidopsis Rhizosphere	MSRRSSRRGRPYQPLPKRDVNWGARLVIIFVAFVLIAGFAILSFAR*
Ga0132257_1003842071	3300015373	Arabidopsis Rhizosphere	MSRRSSRRGRPYQPLPKLDVNWGARLVIIFVAFVLIAGFAILSFAR*
Ga0132255_1003296381	3300015374	Arabidopsis Rhizosphere	KGRPYQPYPARTTNWAARLVIVAIGFIMVIGIAVLAFSR*
Ga0134083_100796923	3300017659	Grasslands Soil	VSRRSPRRGRPYQPLPERRGSWVAKLVVLFVAFILVVGFAILTFSK
Ga0184610_10772183	3300017997	Groundwater Sediment	MSRRSSRRGRPYQPLPERRVNWAARLVIIVVAFVLVAGFAILTFAR
Ga0184610_11256171	3300017997	Groundwater Sediment	MSRRSNRRGRPYQPLPTRQVNWGARLVIIFVAFVLIAGFAILSFAR
Ga0184638_12068802	3300018052	Groundwater Sediment	MPGRSSRRGRPYQPLPARRTSWGARLVVVFIALILVGGFAILTFVR
Ga0184638_12288152	3300018052	Groundwater Sediment	MSRRSNRRGRPYQPLPTRQVNWGARLVIIFVAFVLIAGFA
Ga0184626_101722962	3300018053	Groundwater Sediment	VSRRSSRRGRPYQPLPERRGSWMAKLVVLFVAFILVLGFAILTFTK
Ga0184626_104084482	3300018053	Groundwater Sediment	MSRRSNRRGRPYQPLPTRRVNWGARLLIIFVAFILVAGFAILSFAR
Ga0184637_102047951	3300018063	Groundwater Sediment	MSRRSSRRGRPYQPIPLRRVNWGARLVVVFVAFILVASFVILTFTR
Ga0184637_102255951	3300018063	Groundwater Sediment	RSSRRGRPYQPLPARRANWGARLVVVFVAFVLVAGFAILTFAR
Ga0184618_100007318	3300018071	Groundwater Sediment	MSRRSSRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFTR
Ga0184618_100304744	3300018071	Groundwater Sediment	AEDGMSRRSQRRGRPYQPLPARRVNWGARLVIVIVAFILVAGFVILSFAR
Ga0184632_100036459	3300018075	Groundwater Sediment	MTRRSGRRGRPYQPLPARHVNWGARLLVVFVAFVLVAGFAILTFTR
Ga0184609_105777801	3300018076	Groundwater Sediment	MTRRRQRGRAYQPLPARHVNWGARLLVVFVAFVLVAGFAILTFAR
Ga0184639_103951882	3300018082	Groundwater Sediment	MSRRSSRRGRPYQPLPVRPINWGARLVVIFVAFILVAGFAILTFAR
Ga0190272_131986901	3300018429	Soil	MSRRSQRRGRPYQPMPVRRVNWVARLVIVFIAFTLVAGFAILTFAR
Ga0190270_129384052	3300018469	Soil	MSRKSQRRGRPYQPLPTRHVNWGARLVIIFVAFVLVAGFAILSFAR
Ga0184643_13844942	3300019255	Groundwater Sediment	MSRRSQRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFTR
Ga0193751_10006419	3300019888	Soil	MSRRSPRRGRPYQPLPERRGSWVAKLVVLFVAFILVVGIAVLAFSR
Ga0193745_10729692	3300020059	Soil	MSRRSQRRGRPYQPLPARRVNWGARLVIVIVAFILVAGFAILSFAR
Ga0210382_100566432	3300021080	Groundwater Sediment	MSRRSQRRGRPYQPLPARRVNWGARLVIVVVAFILVAGFAILSFAR
Ga0193719_103253452	3300021344	Soil	VSRRSSRRGRPYQPLPERHTNWGARLLVLFVAVILIAGFAILTFTR
Ga0224500_100217952	3300022213	Sediment	VGPVSRRSSRRGRPYQPLPQRNVNWGARLLVVFVAFIMVAGFAILTFAR
Ga0224505_100503234	3300022214	Sediment	VSRRSSRRGRPYQPLPQRNVNWGARLLVVFVAFIMVAGFAILTFAR
Ga0209001_10726122	3300025002	Soil	MSRRSSRRGRPYQPLPQRRVNWGARLLVVFVAFILVAGFAILTFAR
Ga0209619_104458591	3300025159	Soil	ALPPAPRVGPMSRRSSRRGRPYQPLPQRRVNWGARLLVVFVAFVLVAGFAILTFAR
Ga0209109_1000409910	3300025160	Soil	MSRRSSRRGRPYQPLPVRRVNWVARLVVVFVAFILVAGFAILTFAR
Ga0209109_100165566	3300025160	Soil	MSRRSSRRGRPYQPLPQRRVNWGARLLVVFVAFVLVAGFAILTFAR
Ga0209109_103317442	3300025160	Soil	MSRRSPRRGRPYQPLPKRHVNWGARLTVVFVAFILVVGFAILTFAR
Ga0209519_107276801	3300025318	Soil	SSRRGRPYQPLPQRRVNWGARLLVVFVAFILVAGFAILTFAR
Ga0209341_100818443	3300025325	Soil	MSRRSPRRGRPYQPLPVRRVNWVARLVVVFIAFVLVASFAIITFTR
Ga0209341_102572463	3300025325	Soil	MSRRSSRRGRPYQPLPVRRVNWVARLVVVFVAFVLVAGFAILTFAR
Ga0209341_107587072	3300025325	Soil	MSRRSPRRGRPYQPLPQRHVNWGARLTVVFVAFILVVGFAILTFAR
Ga0210132_10774812	3300025538	Natural And Restored Wetlands	VSRRSSRRGRPYQPLPPRRTNWGARLVIVFVAFILVAGFAVLTFVK
Ga0210113_11131702	3300025796	Natural And Restored Wetlands	MSRSRRSGRRGRPYQPYPERRTNWAARLIIVVVAFIMVAGIAVLTFTQ
Ga0210144_11868942	3300025817	Natural And Restored Wetlands	VSRRGNRRGRPYQPYPDRRVNWGARLLIVAIAFVMVAGIAILAFAR
Ga0207653_104205482	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSSRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFSR
Ga0207707_111867502	3300025912	Corn Rhizosphere	MSRRSQRRGRPYQPLPTRRVNWGARLVIVIVAFVLVAGFAILSFAR
Ga0207646_100265517	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSSRKGRPYQPLPERRVNWGARLVIIFVAFILVAGFAILSFAR
Ga0207646_115286782	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRSSRRGRPYQPLPERRVNWGARLVIVVVAFILVAGIAVLSFAR
Ga0207690_117652451	3300025932	Corn Rhizosphere	MSRRSQRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFAR
Ga0207648_103721123	3300026089	Miscanthus Rhizosphere	MSRRSQRKGRPYQPLPVRHTNWGARLVIIFVAFILVAGFAILSFSR
Ga0207648_116891181	3300026089	Miscanthus Rhizosphere	SCSAANGADKSMSRRSQRRGRPYQPLPTRRVNWGARLVIVIVAFVLVAGFAILSFAR
Ga0256867_100250693	3300026535	Soil	VTRRSGRKGRPYQPYPVRRVNWAARLLIVAIAFIMVAGFAVLTFVR
Ga0209968_10839972	3300027526	Arabidopsis Thaliana Rhizosphere	SRKGRPYQPLPVRHTNWGARLVIISVAFILVAGFAILSFSR
Ga0214469_10445302	3300027636	Soil	MSRRSRRGRPYQPYPQRRVNWGARLLIVAIAFILVAGFAILTFAR
Ga0214468_10309502	3300027647	Soil	MSRRTRRGRPYQPYPQRRVNWGARLLIVAIAFILVAGFAILTFAR
Ga0256866_10587312	3300027650	Soil	MSRRRKGRPYQPYPTRNVNWGARLLIVLVGFIMVVGIAILTFTR
Ga0307295_100759272	3300028708	Soil	MSRRSQRRGRPYQPLPARRVNWGARLVIVFVAFVLVAGFAILSFAR
Ga0307298_102021952	3300028717	Soil	MSRRSQRRGRPYQPLPTRRVNWGARLVIVFVAFVLVAGFAILSFAR
Ga0307319_101330381	3300028722	Soil	QRRGRPYQPLPTRRVNWGARLVIVFVAFVLVAGFAILSFAR
Ga0307320_101698262	3300028771	Soil	MSRRSNRRGRPYQPLPTRQVNWGARLVIIFVAFVLVAGFAILSFAR
Ga0307282_100999893	3300028784	Soil	MSRRAQRRGRPYQPLPARRVNWGARLVIVVVAFILVAGFAILSFAR
Ga0307504_100012466	3300028792	Soil	MSRRSTRRGRPYQPLPERRVNWGARLVVIFVAFFLIAGIAILSFTR
Ga0307299_100618173	3300028793	Soil	MSRRSSHRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFTR
Ga0307305_104355642	3300028807	Soil	MSRRSSRRGRPYQPLPERHTNWGARLLVLFVAVILIAGF
Ga0307302_100676403	3300028814	Soil	MSRRSQRRGRPYQPLPPSRTSWGARLIVIFVAFVLVAGFAILTFSR
Ga0307296_101949073	3300028819	Soil	RSPRRGRPYQPLPARRVNWGARLVIVVVAFILVAGFAILSFAR
Ga0307310_103447062	3300028824	Soil	MTRRRRGRPYQPYPARQVNWGARVIIVIVGFIMILGIAILTFTR
Ga0307312_102169261	3300028828	Soil	QRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFTR
Ga0307312_103306371	3300028828	Soil	SSRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFTR
Ga0307312_103658942	3300028828	Soil	GAHDPVPAPSRVGPMSRRSQRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFTR
Ga0307312_111716911	3300028828	Soil	MSRRSQRRGRPYQPLPARRVNWGARLVIVIVAFILVAG
Ga0307278_103159001	3300028878	Soil	MSRRSQRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILSFAR
Ga0307308_105689971	3300028884	Soil	SSFAASGAGEGMSRRSQRRGRPYQPLPERRVNWGARLVIFFVAFVLVAGFAILTFAR
Ga0299907_100733784	3300030006	Soil	MSRRRRGRPYQPYPTRNVNWGARLLIVLVGFIMVVGIAILTFTR
Ga0299907_105240712	3300030006	Soil	VTRRSGRKGRPYQPYPVRRVNWAARLLIVAIAFIMVAGFAVLTF
Ga0299907_109714872	3300030006	Soil	MTRRGGRRGRAYQPIPTRRVNWGARLLVVFVAFIMVAGFAILTFAR
Ga0268386_107971622	3300030619	Soil	MSRSRRSGRKGRPYQPYPERRTNWAARLIIVVVAFIMVAGIAVLTFTQ
Ga0299913_100090314	3300031229	Soil	VSRRSGRKGRPYQPYPVRRVNWGARLLIVAVAFIMVAGFAVLTFAR
Ga0299913_102885391	3300031229	Soil	RPYQPYPVRRVNWAARLLIVAIAFIMVAGFAVLTFVR
Ga0299913_107789802	3300031229	Soil	MSRSRRSGSKGRPYQPYPERRTNWAARLIIVVVAFIMVAGIAVLTFTQ
Ga0310813_110834522	3300031716	Soil	MTRRRRGRPYQPYPTRRVNWGARIVIVAVGFIMVVGFAILTFTH
Ga0307468_1024336482	3300031740	Hardwood Forest Soil	VSRRSSRRGRPYQPLPERRTNWGARLLVLFVAVILIAGFAILTFTR
Ga0214473_110379801	3300031949	Soil	MSRRSSRRGRPYQPLPARRVNWGARLVIFFVAFVLVAGFAILSFAR
Ga0326597_113223052	3300031965	Soil	MSRRSPRRGRPYQPLPERHVNWAARLVVIFVAFILVAGFAILTFAR
Ga0326597_120147852	3300031965	Soil	MSRRSSRRGRPYQPLPERNVNWGARLTVVFVAFILVAGFAILTFAR
Ga0315540_102706511	3300032061	Salt Marsh Sediment	MSRRSGRRGRPYQPYPERRANWGARLLVVFVAFVMIAGFAILTF
Ga0310890_113277342	3300032075	Soil	VTRRRKGRAYQPYPARRSNWAARLVIVAIGFIMVLGIAVLAFTR
Ga0315281_1000559819	3300032163	Sediment	VRRRSSRRGRPYQPLPKSQSNWGARLIVVFVAFILVAGFAILTFAR
Ga0315281_100483948	3300032163	Sediment	VGALNPVSRRSSRRGRPYQPLPVRRVNWGARLVVVFVAFILVAGFAILTFAR
Ga0214472_1000744017	3300033407	Soil	MSRRSSRRGRPYQPLPARRVNWGARLVIIFVAFVLVAGFAILSFSR
Ga0214471_1000136217	3300033417	Soil	VTRRSGRRGRAYQPMPTRRVNWGARLLVVFVAFIMVAGFAILTFAR
Ga0326726_103560272	3300033433	Peat Soil	MSRRSPRRGRPYQPLPERNINWGARLTVVVIAFILVIGFAILAFAR
Ga0326726_112344292	3300033433	Peat Soil	MSRRSPRRGRPYQPLPERNINWGARLTVVIIAFILVIGFAILAFSH
Ga0364926_149869_294_434	3300033812	Sediment	MSRRSSRRGRPYQPLPARRANWGARLVVVFVAFVLVAGFAILTFAR
Ga0364930_0188474_165_305	3300033814	Sediment	MSRRSPRRGRPYQPLPQRHVNWGARLTVVVVAFILIVGFAILTFAR
Ga0364936_107331_431_553	3300034773	Sediment	MSRRSSRRGRPYQPLPASRVNWVARLVIIFIAFTLVAGFAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038581

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences