NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F038329

Metagenome / Metatranscriptome Family F038329

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F038329
Family Type Metagenome / Metatranscriptome
Number of Sequences 166
Average Sequence Length 63 residues
Representative Sequence MLRRMPTDASVTTRLEPPYETNGSGIPVSGASPSTAARLIAACPQTSAVIPAARRFPNGSRQPIAR
Number of Associated Samples 146
Number of Associated Scaffolds 166

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 32.93 %
% of genes near scaffold ends (potentially truncated) 81.93 %
% of genes from short scaffolds (< 2000 bps) 89.16 %
Associated GOLD sequencing projects 138
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (89.759 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(12.048 % of family members)
Environment Ontology (ENVO) Unclassified
(24.096 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.578 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94
1A17_10400291
2soilH1_100291653
3Ga0055471_100057863
4Ga0063356_1049811802
5Ga0062592_1007852391
6Ga0062592_1024911982
7Ga0062594_1026761331
8Ga0066677_105285042
9Ga0066679_102505941
10Ga0066679_106131022
11Ga0066679_109619241
12Ga0066688_100390184
13Ga0066688_105012271
14Ga0066675_100677181
15Ga0070687_1013467021
16Ga0070661_1005143041
17Ga0070671_1007174652
18Ga0070714_1003204623
19Ga0070714_1009261831
20Ga0066687_100072245
21Ga0070678_1005633321
22Ga0068867_1004950022
23Ga0070707_1002899711
24Ga0070707_1013173522
25Ga0070699_1008213792
26Ga0070699_1018733042
27Ga0070739_102962611
28Ga0070704_1011233231
29Ga0066707_106938902
30Ga0066700_107473592
31Ga0066670_109364282
32Ga0070664_1024027871
33Ga0066705_109299272
34Ga0066702_107173731
35Ga0068857_1010178141
36Ga0066654_104860932
37Ga0066654_108182591
38Ga0068856_1015097052
39Ga0066903_1003428573
40Ga0066903_1008188633
41Ga0066903_1013568751
42Ga0068863_1004758031
43Ga0075270_10006014
44Ga0066656_109534462
45Ga0070712_1017717812
46Ga0068871_1012552632
47Ga0074064_114416702
48Ga0079222_121384302
49Ga0066660_102215593
50Ga0079221_113461952
51Ga0075421_1001264981
52Ga0075421_1024493861
53Ga0073934_102272861
54Ga0079216_110231901
55Ga0075419_109594322
56Ga0066710_1003428571
57Ga0066710_1049101201
58Ga0114129_100316961
59Ga0105100_108226961
60Ga0105237_110482522
61Ga0105072_11003801
62Ga0105068_10754692
63Ga0126308_110456532
64Ga0126310_117702401
65Ga0126384_115171391
66Ga0134080_101837261
67Ga0126377_114705222
68Ga0126379_116316801
69Ga0134125_122077391
70Ga0134128_111223682
71Ga0137432_10677031
72Ga0136620_100285491
73Ga0137363_112061242
74Ga0137368_106652152
75Ga0137361_113798182
76Ga0157286_101077262
77Ga0164298_114614442
78Ga0164303_109820552
79Ga0164308_107283462
80Ga0164304_118108321
81Ga0164307_117420991
82Ga0164306_117316681
83Ga0164305_113242012
84Ga0157373_114304672
85Ga0134078_105393632
86Ga0075327_13313252
87Ga0163163_115498461
88Ga0182015_107418261
89Ga0157379_121685642
90Ga0137405_11903051
91Ga0182038_121459932
92Ga0136617_104658391
93Ga0190266_100702371
94Ga0187788_103613721
95Ga0187788_104556692
96Ga0187788_105411261
97Ga0184623_101067351
98Ga0187765_113330052
99Ga0184609_101512562
100Ga0184612_100496541
101Ga0184612_102782921
102Ga0184627_105871951
103Ga0066667_111716622
104Ga0190270_104002822
105Ga0190271_123484691
106Ga0173482_104193961
107Ga0193696_11549422
108Ga0193721_11409741
109Ga0206353_104779992
110Ga0222621_10499461
111Ga0126371_133338801
112Ga0247800_10988351
113Ga0207693_111351362
114Ga0207660_107240322
115Ga0207662_110177501
116Ga0207657_100131309
117Ga0207657_100784424
118Ga0207649_101214743
119Ga0207646_113220391
120Ga0207700_103628202
121Ga0207700_119185332
122Ga0207709_117521222
123Ga0207669_102458781
124Ga0207651_115826352
125Ga0207712_117912562
126Ga0207640_105911602
127Ga0208651_10090851
128Ga0208530_10062892
129Ga0207639_113763332
130Ga0207708_112732241
131Ga0207648_111214061
132Ga0207675_1005920971
133Ga0209687_10083605
134Ga0209152_102818871
135Ga0209801_12700771
136Ga0209474_106735342
137Ga0209887_10303691
138Ga0209074_100557582
139Ga0209811_102152081
140Ga0209811_104320681
141Ga0209820_10671371
142Ga0265326_100659171
143Ga0265326_101687571
144Ga0307318_100526701
145Ga0307282_103963521
146Ga0307323_100376123
147Ga0265338_102205213
148Ga0307278_101065992
149Ga0311348_112849681
150Ga0307501_101205071
151Ga0299913_114654791
152Ga0318534_107087052
153Ga0318515_104279141
154Ga0247727_100264279
155Ga0318546_112141502
156Ga0307413_114347242
157Ga0302322_1002934773
158Ga0318531_101273421
159Ga0308176_111116732
160Ga0308173_109642101
161Ga0335085_115948191
162Ga0335085_124293702
163Ga0335081_121901351
164Ga0335077_101848983
165Ga0314866_086155_123_314
166Ga0364941_129975_375_587
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 10.64%    β-sheet: 0.00%    Coil/Unstructured: 89.36%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MLRRMPTDASVTTRLEPPYETNGSGIPVSGASPSTAARLIAACPQTSAVIPAARRFPNGSRQPIARSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
89.8%10.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Polar Desert Sand
Natural And Restored Wetlands
Hot Spring Sediment
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Permafrost And Active Layer Soil
Soil
Grasslands Soil
Soil
Soil
Soil
Soil
Soil
Natural And Restored Wetlands
Rice Paddy Soil
Peatland
Tropical Peatland
Palsa
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Groundwater Sand
Fen
Biofilm
Sediment
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
3.0%11.4%12.0%6.6%3.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A17_104002913300002028Permafrost And Active Layer SoilMLRRTPTPASITTRLEPPYETNGSGIPVSGATPRAAAMLIAACPQTSAVIPAASRFANGS
soilH1_1002916533300003321Sugarcane Root And Bulk SoilMLRRTPTAASITTRLEPPYETNGRGIPVSGATPIAAAMLIAAWPQTSAVIPAARRFANGSRQAIASRTPA*
Ga0055471_1000578633300003987Natural And Restored WetlandsMLRRIPTPARRTTRLDPPYETNGSGMPVSGAIPRTAARLIVACAVTSAVMPVARSLPKGSRQRSAMRKP
Ga0063356_10498118023300004463Arabidopsis Thaliana RhizosphereMLRRIPAPARATTRLEPPYETNGSVIPVTGASPSTAARFVAACAPMSTVRPVASSEPK
Ga0062592_10078523913300004480SoilMLRRMPTHARPTTRLEPPYETNGSGIPVSGARPITAARLIAAWPQTSAVSPAASRFPNGSLQSSAIFSP
Ga0062592_10249119823300004480SoilMLRRIPTEASSTTRLDPPYERNGSGMPVSGAMPITAQMLTAAWPQTSTVSPAASRLPN
Ga0062594_10267613313300005093SoilMLRRMPTQASATTRLEPPYETNGNGIPVSGASPITAARLIAAWPQTSAVSPAASRLPNGSLHCSAIFRPR
Ga0066677_1052850423300005171SoilMMTRLEPPYETNGSGIPVSGATPIAAAMLIAAWPQTSAVIPAASRFANGSRVAIASR
Ga0066679_1025059413300005176SoilMTRLEPPYDTNGSGIPVSGARPSTAARLIAAWPQMSAVMPAASRLPKGSLQPIASRRPA*
Ga0066679_1061310223300005176SoilMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPTAAAMLIAACPQTSAVIPAASRFANGSRHAIASR
Ga0066679_1096192413300005176SoilMRLDPPYERNGSGIPVSGAAPTTAAMLIAAWPQTRAVTPAASRFPNGSLHA
Ga0066688_1003901843300005178SoilMLRRMPTARRATTRLEPPYEMNGSGIPVSGASPSTAARLITACPDTSATSPAASRLPKGS
Ga0066688_1050122713300005178SoilMLRRTPTPASITTRLEPPYETKGSGIPVSGATPVAAAMLIAAWPQTRAVMPAASRLANGSRQEIASRMPA*
Ga0066675_1006771813300005187SoilMLRRMPTETSATTRLEPPYDTKGSGIPVSGASPITAARLIAAWPHTSTVRPAASRLPKGSLQLSAIRRPKYANAPYAA
Ga0070687_10134670213300005343Switchgrass RhizosphereMLRRTPTPTSITTRLEPPYDTNGSGIPVSGAMPTQAAMLIAACPQTSSVIPAASRFANGSRQAIASRIPA
Ga0070661_10051430413300005344Corn RhizosphereMLRRTPTPTSITTRLEPPYDTNGSGIPVSGAMPTQAAMLIAACPQTSAVTPAAS
Ga0070671_10071746523300005355Switchgrass RhizosphereMLRRTPTPTSITTRLEPPYDTKGSGIPVSGAMPTQAAMLIAACPQTSAVIPAASRFANGSRQAIASRIPA*
Ga0070714_10032046233300005435Agricultural SoilMTTRLDPPYETNGSGIPVSGATPITAAMLIAACPQTRAVIPAASRLANGSRQEIARRI
Ga0070714_10092618313300005435Agricultural SoilMLRRTPTPTSMTTRLEPPYETNGSGIPVSGATPMAAAMLIAAWPQTSAVMPAASRFANGSRHAIASRMPA*
Ga0066687_1000722453300005454SoilMTRLEPPYDTNGSGIPVSGARPRTAARLIAAWPQTSAVMPAASRFPNGSLHAIA
Ga0070678_10056333213300005456Miscanthus RhizosphereMLRRTPTASSVTTRLEPPYEMKGSGIPVRGASPRTAARLITAWPLTSATTPTASRFPKGSLQVSATRSPAQANTT
Ga0068867_10049500223300005459Miscanthus RhizosphereMSDEPPYETNGSGIPVSGAMPRTAQRLIAACPQTRVVIPAASRLPNGSRQWRAI
Ga0070707_10028997113300005468Corn, Switchgrass And Miscanthus RhizosphereMRLEPPEETSGSVIPVSGAIPSTAAMLMNACPQTSTVSPAASRFPNGSRH
Ga0070707_10131735223300005468Corn, Switchgrass And Miscanthus RhizosphereMTRLDPPYDTNGSGMPVSGASPSTAARLIAACPQTSAVMPAARRFPNGS
Ga0070699_10082137923300005518Corn, Switchgrass And Miscanthus RhizosphereMLRTIPTEASKTRRLEPPYETNGSGIPVSGATPSTAARFTAAWPQTRDVIPAARSFPKGSRHRSATEKPANAKAPNAAI
Ga0070699_10187330423300005518Corn, Switchgrass And Miscanthus RhizosphereMTRLDPPYDTNGSGMPVSGASPSTAARLIAACPQTSAVMPAARRFPNGSLQPMA
Ga0070739_1029626113300005532Surface SoilMLRSIPTATSMTTRLEPPYETKGSGIPVNGARPVVAAMLIAAWPQTSAVTPAASRFANGSRQATASRIPA*
Ga0070704_10112332313300005549Corn, Switchgrass And Miscanthus RhizosphereMLRRTPTPTSMTTRLEPPYETNGSGIPVSGATPMAAAMLIAAWPQTSAVMPAASRFANGSRHAIASRMP
Ga0066707_1069389023300005556SoilMLRRIPTEASTTTTLVPPYETSGSGIPVSGAIPTTAARFSAACPQTSVVRPAAVYFPKGSRQASAIRVPAYAKAT*
Ga0066700_1074735923300005559SoilMLRRTPTPASMMTRLEPPYETNGSGIPVSGATPIAAAMLIAAWPQTSAVIPAA
Ga0066670_1093642823300005560SoilMPTETSATTRLEPPYDTNGSGIPVSGATPSAAAMLIAACPHTSALIPAASRL
Ga0070664_10240278713300005564Corn RhizosphereMLRRIPTPASSTTRLEPPYERNGSGIPVNGAAPITARMFTAACPQTSTVSPAARRFP
Ga0066705_1092992723300005569SoilMLRRIPTPARRTTRLEPPYERNGSGIPVNGALPITASMLTAAWPQTSTVRPVASRLPNGS
Ga0066702_1071737313300005575SoilMLRRTPTAASITTRLDPPYETNGSGIPVNGATPIAAAMLIAACPQTSAVIPAASRFAN
Ga0068857_10101781413300005577Corn RhizosphereMPTDASMTTRLVPPYDTRGSGIPVSGATPTTAARLSAAWPQISVVIPTASPLPKGSWQRS
Ga0066654_1048609323300005587SoilMPTAARPTIRLEPPYETNGSGIPVSGASPITAARLIAAWPQTSAVSPAASRLPNGSLH
Ga0066654_1081825913300005587SoilMTRLEPPYETNGSGMPVSGASPSTAARLIAAWPQTSAVIPAASRLPKGSLHVIASRRPAY
Ga0068856_10150970523300005614Corn RhizosphereMLRRIPTQASATTRLDPPYETNGSGIPVSGARPMTAARLIAAWPQTSAVSPAASRLPNGSLHCSAI
Ga0066903_10034285733300005764Tropical Forest SoilMLRRTPTDASRTTRLEPPYETNGRGIPVSGAMPSAAARLIAACPETSAVIPAASSFPKGSWQRRAIRNPATASTAK
Ga0066903_10081886333300005764Tropical Forest SoilMLRRMPTDTSSTTRLEPPYETNGSGIPVSGASPRTAAMLIAAWHATTAVRPAARRLPKGS
Ga0066903_10135687513300005764Tropical Forest SoilMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPIAAAMLIAACPQTSAVIPAASRFANGSRQAIAS
Ga0068863_10047580313300005841Switchgrass RhizosphereMPTQASATTRLEPPYETNGSGIPVSGARPMTAARLIAAWPQTSAVRPAASRLPNGSRQRIAIRSPTYA
Ga0075270_100060143300005894Rice Paddy SoilMPTDASVTTRLEPPYETNGSGIPVSGASPSTAARLIAACPQTSAVIPAARRFPNGSR
Ga0066656_1095344623300006034SoilMLRRIPTEQRMTTRLVPPYETNGSGIPVSGAIPTTAARFSAAWPQTVAVRPAASRFPNGSGQRSAIRSPA
Ga0070712_10177178123300006175Corn, Switchgrass And Miscanthus RhizosphereMLRSMPTEASITTRLEPPYETKGSGIPVSGARPTAAAMLIAACPQTSAVIPAASRFANGSRHATASRIPA*
Ga0068871_10125526323300006358Miscanthus RhizosphereMRLEPPYDTNGSGIPVSGAMPSAAARLIAACPLTSAVIPAASSFPNGS
Ga0074064_1144167023300006603SoilMLRRTPTPTSITTRLEPPYEMNGSGIPVSGATPTAAAMLIAACPQTSAVIPAASRLAKGSRQPIASRIPA*
Ga0079222_1213843023300006755Agricultural SoilVITRLEPPYDTNGSGTPVSGARPSTAPRLIAACPQTSAVIPAATRLPNGSLHVIASRRPAYANA
Ga0066660_1022155933300006800SoilMLRRTPTPASITTRLEPPYETNGSGIPVSGATPVAAAMLIAAWPQTRAVMPAASRLANG
Ga0079221_1134619523300006804Agricultural SoilMLRRTPTASSVTTRLEPPYEMSGSGIPVSGARPTTAARLMTAWPLTSATTPTARRFP
Ga0075421_10012649813300006845Populus RhizosphereMLRSTPTPVSITSSEEPPYETNGSGIPVSGAIPSTAARLTAAWPQTRVVIPAASRLPNGSRHSSA
Ga0075421_10244938613300006845Populus RhizosphereVSITTRLEPPAETNGSGIPVSGARPRTAARLTAAWPQTSAVSEAARRLPKGSAQWS
Ga0073934_1022728613300006865Hot Spring SedimentMLWRIPTPASRTTSDEPPYETNGSGMPVSGAIPSTAVMFTAACAQTSVVIPAASRFPNGS
Ga0079216_1102319013300006918Agricultural SoilMLRRIPTEASRTTRLEPPYETNGSGIPVSGATASTAARFTAAWPQTSEVMPAASSLPNGSRQRSATVNPANAKAANAPMTAVVPI
Ga0075419_1095943223300006969Populus RhizosphereVSATTRLEPPADTNGSGIPVNGARPSTAARLTAAWPQMSAVSAAARRFP
Ga0066710_10034285713300009012Grasslands SoilMLRRIPTEASTTTLVPPYETSGSGIPVSGAIPTTAARFSAACPQTSVVRPAAVYFPKGSRQASAIRVPAYAKAT
Ga0066710_10491012013300009012Grasslands SoilMPTERSATTRLEPPYETNGSGMPVSGASPSTAARLIAACPQTSAVIPAASRFPKGSLQL
Ga0114129_1003169613300009147Populus RhizosphereMLRRIPTPVSATTRLEPPADTNGSGIPVNGARPSTAARLTAAWPQMSAVSAAARRFPKGS
Ga0105100_1082269613300009166Freshwater SedimentMLRRIPTPARRTTRLDPPYETNGSGIPVSGAIPRTAARLIVACAHTRAVSPAARSLPNGSRQRIAMRNPAKA
Ga0105237_1104825223300009545Corn RhizosphereMLRRIPTQASATTRLEPPYETNGSGIPVSGASPITAARLIAAWPQTSAVRPAARRL
Ga0105072_110038013300009818Groundwater SandMLRRIPTAARSTTRLEPPYETNGSGIPVRGAMPSTAARLIRACPETSVVRPAA
Ga0105068_107546923300009836Groundwater SandMLRRMPTEASMTTRLEPPYETKGSGIPVSGARPITALTLTAACPQMSAVIPAARSFP
Ga0126308_1104565323300010040Serpentine SoilMLRRIPTAPSRTTRLDPPYDTNGSGIPVSGATPSTAARFTAACPQTSEVIPAATSLPNGSRQRSATVKPAKAKAA
Ga0126310_1177024013300010044Serpentine SoilMLRRTPTASSVTTRLEPPYETNGSGIPVSGAIPSTAARLTAACPQTSDVMPAASS
Ga0126384_1151713913300010046Tropical Forest SoilMLRRMPTLARPTTRLEPPYETNGSGIPVSGASPITAARLIAAWPQTRAVNPAASRFPNGSLQSSAIFNP
Ga0134080_1018372613300010333Grasslands SoilMPTERSATTRLEPPYETNGSGMPVSGASPSTAARLIAACPQTSAVIPAASRFPNGSLQLIASRRPAYAKAQ*
Ga0126377_1147052223300010362Tropical Forest SoilMRLEPPYETNGSGIPVSGASPITAAMLMAAWPQMSIVSPVASALPNESRQRSAI
Ga0126379_1163168013300010366Tropical Forest SoilMLRRTPTPTSITTRLEPPYETKGSGIPVSGATPMTAAMLIAACPQTSAVIPAASRFAKGSRHAIASRIPA*
Ga0134125_1220773913300010371Terrestrial SoilMLRRIPTDASSTTRLDPPYETNGSGIPVSGATPSTAARLTAAWPQTSDVIPAASSFPNGSRQRSATVKPANANAA
Ga0134128_1112236823300010373Terrestrial SoilMLRRTPTAASITTRLDPPYETNGSGIPVNGATPIAAAMLIAAWPQTSAVIPAASRFANGS
Ga0137432_106770313300011439SoilMLRRMPTEARNTMRLEPPYETNGSGIPVSGARPMTALTLTAAWPQISAVIPAARNFPKGSRQASAT
Ga0136620_1002854913300012186Polar Desert SandMLRRMPTAVSEMTRFEPPYEMKGSGIPVSGASPRTAARLIAAWAETSAPRPAASCFPK
Ga0137363_1120612423300012202Vadose Zone SoilMLRRIPTEASSTTRLDPPYERNGSGIPVSGATPITAATFTAACPQTSTVSPTARRLPNGSRHPSAIFS
Ga0137368_1066521523300012358Vadose Zone SoilMLRRIPTETSSTTRLDPPYETNGSGIPVSGARPRTAARLIHAWQQMSEVSPAASRLPKGSRHSSAVLKPAQTKRTYAKITE
Ga0137361_1137981823300012362Vadose Zone SoilMPTETSATTRLEPPYETNGSGIPVSGARPITAARLIDAWPQTSTVSPAASRLPK
Ga0157286_1010772623300012908SoilMLRRTPAEASETTRLDPPYETNGSGMPVSGAIPSTAARLMVACPQTSAVRPAARSFPKGSRQRIAMRKPAKANAA
Ga0164298_1146144423300012955SoilMLRRMPTETSSTTRLEPPYETNGSGIPVSGAIPRTAARLMQAWQQTSAVSPAARRFPNGSRHSSAVFNPAHAKRTYARISDAVPMSPSSSPMTA
Ga0164303_1098205523300012957SoilMLRSTPTPVSITSSDEPPYETNGSGIPVSGATPSTAARLITACPQTSVVMPAARRFPNGSRQVSATR
Ga0164308_1072834623300012985SoilMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPMAAAMLIAAWPQTSAVMPAAS
Ga0164304_1181083213300012986SoilMLRRTPTDRSVTTRLEPPYEMKGRGIPVSGASPSTAARLITACPLTSATTPTASRLPNGSLQ
Ga0164307_1174209913300012987SoilMLRRIPTEASSTTRLEPPYDRNGSGIPVRGARPITAATLTTACPQTSTVRPTASRLPNG
Ga0164306_1173166813300012988SoilMLRRIPTEASATMRLEPPYETNGSGIPVSGARPSTAARLIAACPLMSAVMPAARR
Ga0164305_1132420123300012989SoilMLRRMPTDRRAMTRLEPPYETKGSGIPVNGASPRTAAMFTAACPQISAVTPAASRFPKGSLQAIAIRRPA*
Ga0157373_1143046723300013100Corn RhizosphereMLRRIPTDRRAITRLEPPYETKGRGIPVSGASPSTAATLIAAWPQTRAVMPAARRLPQGSLHVIA
Ga0134078_1053936323300014157Grasslands SoilMLRRTPTAASITTRLDPPYETNGSGIPVNGATPIAAAMLIAACPQTSAVIPAATRFANASRDAMASRTPA*
Ga0075327_133132523300014272Natural And Restored WetlandsMLRRMPTPASSTTRLDPPYETNGSGIPVSGAIPSTAARLIAACPATSDVIPAASSFPNGSRQRSAI
Ga0163163_1154984613300014325Switchgrass RhizosphereMLRRTPTPTSITTRLEPPYETKGSGIPVSGATPITAAMLIAAWPQTSAVMPAASRF
Ga0182015_1074182613300014495PalsaMLRRIPTEARRMTTLEPPYERNGSGIPVSGATPMTAAMLTAACAHTSVVSPTASRLPKPSRQLSAM
Ga0157379_1216856423300014968Switchgrass RhizosphereMLRRMPTDTSSTTRLEPPYETNGSGIPVSGAIPSTAARLIAAWHETSAVIPAAS
Ga0137405_119030513300015053Vadose Zone SoilMLRRIPTDRSAMTRLEPPYETNGSGIPVSGASPSTAARLIAACPQMSAVTPAASRF
Ga0182038_1214599323300016445SoilMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPIAAAMLIAACPQTSAVIPAASRFPNGSRVAIARRTPAYAKVQNAPTR
Ga0136617_1046583913300017789Polar Desert SandVAASRTTRLEPPYDTNGSGIPVSGAIPSTAARFTAACPQTSEVMPAASSF
Ga0190266_1007023713300017965SoilMTRLEPPYETNGSGIPVSGARLMTAARLIPACAQTSTVMPVARRFPNGS
Ga0187788_1036137213300018032Tropical PeatlandMLRRTPTPVRSTISDEPPYDTNGSGMPVSGATPRTAARLITACPQTRVVIPAASR
Ga0187788_1045566923300018032Tropical PeatlandMLRRTPTDASITRRLEPPYETNGSGIPVSGARPMAAAMLIAACPQTSAVIPAASRFANGSRQAIASRIPAYAK
Ga0187788_1054112613300018032Tropical PeatlandMSATTRLEPPYETNGSGIPVSGASPSTAARLIPAWPQTSTVSPAASRFPKGSRHPSA
Ga0184623_1010673513300018056Groundwater SedimentMLRRMPTARSATTRLEPPYETNGSGIPVSGAMPMTAARLIEAWPQTRTVRPAASR
Ga0187765_1133300523300018060Tropical PeatlandMLRRIPTEARSTIRLDPPYDRNGSGIPVSGATPITAPMLITAWPQTSTVRPLASRFPNGS
Ga0184609_1015125623300018076Groundwater SedimentMLRRIPTPASPTTRLDPPYETKGRVIPVSGATPITAAILISACPQTRVVTPAASRFPNGSLQASATRKPAYAKPAYAAISAV
Ga0184612_1004965413300018078Groundwater SedimentVAASRTTRLEPPYETNGSGIPVSGATPSTAARFTAAWPQTSEVMPAASSFPKGSRQRSAT
Ga0184612_1027829213300018078Groundwater SedimentMRLEPPYETNGSGIPVSGARPMTALTLTAAWPQISAVIPAARNFPKGSRQASATL
Ga0184627_1058719513300018079Groundwater SedimentVAASRTTRLEPPYETNGSGIPVSGAIPSTAARFTAACPQASDVTPAASSFPKGSRQRSATVKPA
Ga0066667_1117166223300018433Grasslands SoilMPVARRSTTRLEPPYETNGRGIPVGRAPPSTAARLMSAWPQTTAVTPAPSRLPDGSAHRSATHSPADAKAQY
Ga0190270_1040028223300018469SoilMLRRTPTEASSTTRLEPPYDTNGSGIPVNGATPITAARLIKAWPHTSVVSAAASRFPKGSLQRRAM
Ga0190271_1234846913300018481SoilMLRRMPTAASRTTRLDPPYETNGSGIPVSGATPSTAARLTAAWPQTREVIPAASS
Ga0173482_1041939613300019361SoilMRLEPPYDTNGSGIPVSGAMPSAAARLIAACPLTSAVIPAASSFPNGSWQRNAIRNPA
Ga0193696_115494223300020016SoilMLRSTPTEASDTTRLDPPYETNGSVIPVSGASPRTAARLTSACPQTRVVKPAARRFPNGSRQRSATRSPAYANAQYAAMTS
Ga0193721_114097413300020018SoilMTRLEPPYETNGRVIPVNGARPSTAARLISAWPQTRVVSPAASRLPKGSRHRSAT
Ga0206353_1047799923300020082Corn, Switchgrass And Miscanthus RhizosphereMLRSTPTDRSATTRLEPPYETNGSGIPVSGARPSTAARLIAACPVIRAVIPAASRF
Ga0222621_104994613300021510Groundwater SedimentMLRRIPIAARSTTRLEPPYETNGSGIPVSGAIPRAAARLIAACPHTSAVIPVARSFPNGSLQRIAIRNS
Ga0126371_1333388013300021560Tropical Forest SoilMLRRIPTPARRTTRLEPPYERNGSGIPVSGASPMTASRLIAAWPQTSTVKPAASRFPNGS
Ga0247800_109883513300023263SoilMLRRIPTAPRSTTRLEPPYDTNGSGIPVRGAMPSAAARLIAACPQTSAVMPAARSFP
Ga0207693_1113513623300025915Corn, Switchgrass And Miscanthus RhizosphereMLRSMPTEASITTRLEPPYETKGSGIPVSGARPTAAAMLIAACPQTSAVIPAASRFANGSRHATASRIPA
Ga0207660_1072403223300025917Corn RhizosphereMLRRTPTAASITTRLDPPYETNGSGIPVNGATPIAAAMLIAACPQTSAVIPAASRFANGSREA
Ga0207662_1101775013300025918Switchgrass RhizosphereMLRRTPTPTSITTRLEPPYDTNGSGIPVSGAMPTQAAMLIAACPQTSAVTPAASRFANG
Ga0207657_1001313093300025919Corn RhizosphereMTRLEPPYETNGSGIPVSGASPSTAARLIAACPQTSAVIPAARRLPKGSLQEMASRRPA
Ga0207657_1007844243300025919Corn RhizosphereMLRRIPTQASATTRLEPPYETNGSGIPVSGASPITAARLIAAWPQTSAVRPAASR
Ga0207649_1012147433300025920Corn RhizosphereMTRLEPPYETNGSGIPVSGASPSTAARLIAACPQTSAVIPAARRLPKGSL
Ga0207646_1132203913300025922Corn, Switchgrass And Miscanthus RhizosphereMRLEPPEETSGSVIPVSGAIPSTAAMLMNACPQTSTVSPAASRFPNGSRHASAMRSPAYANAT
Ga0207700_1036282023300025928Corn, Switchgrass And Miscanthus RhizosphereMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPMAAAMLIAAWPQTSAVMPAASRFANGSRHAIASRMPA
Ga0207700_1191853323300025928Corn, Switchgrass And Miscanthus RhizosphereMTRLDPPYETNGSGIPVSGASPRTAARLMAACPQTSAVMPAARRFPNGSLHAIARRRP
Ga0207709_1175212223300025935Miscanthus RhizosphereMLRRMPTDASTTTRLVPPYDTRGSGIPVSGATPTTAARLSAAWPQTNVVIPTARPFPNGS
Ga0207669_1024587813300025937Miscanthus RhizosphereMLRRIPTQASATTRLEPPYETNGSGIPVSGASPITAARLIAAWPQTSAVRPAASRLPKGSLHCNAT
Ga0207651_1158263523300025960Switchgrass RhizosphereMLRRMPTQASATTRLEPPYETNGNGIPVSGASPITAARLIAAWPQTSAVSPAASRLPNGSLHC
Ga0207712_1179125623300025961Switchgrass RhizosphereMLRSTPTPASITSSDDPPYETNGSGIPVSGAMPSTAARLTAAWPQTSVVIPAARR
Ga0207640_1059116023300025981Corn RhizosphereMLRRIPTQASATTRLEPPYETNGSGIPVSGASPITAARLIAAWPQTSAVRPAASRLPKGSLHC
Ga0208651_100908513300025998Rice Paddy SoilMLRRMPTDASVTTRLEPPYETNGSGIPVSGASPSTAARLIAACPQTSAVIPAARRFPNGSRQPIAR
Ga0208530_100628923300026009Rice Paddy SoilMTRLEPPYETNGSGIPVSGASPSTAARLIAAWPQTSAVIPAARRLPNGSLQEMASRRP
Ga0207639_1137633323300026041Corn RhizosphereMLRSTPTDRSATTRLEPPYETNGSGIPVSGARPSTAARLIAACPVIRAVIPAASRFPNGSLHASASLRPAYANAQYP
Ga0207708_1127322413300026075Corn, Switchgrass And Miscanthus RhizosphereMLRRMPTQASATTRLDPPYETNGSGIPVSGASPITAARLIAACPQTSAVSPAASRLPNGSLHC
Ga0207648_1112140613300026089Miscanthus RhizosphereMLRRMPTETSSTTRLEPPYETKGSGIPVSGAMPRTAARLMQAWQQTSAVRPAASR
Ga0207675_10059209713300026118Switchgrass RhizosphereMPTHARPTTRLEPPYETNGSGIPVSGARPITAARLIAAWPQTSAVSPAASRFPNGSLQYSAIF
Ga0209687_100836053300026322SoilMTRLEPPYDTNGSGIPVSGARPRTAARLIAAWPQTSAVMPAASRFPNGSLHAIASRRPAYANAQ
Ga0209152_1028188713300026325SoilVITRLEPPYDTNGSGIPVSGASPSTAARLIAACPQMSAVIPAASRLPNGSLHEIASRMPAYANAQ
Ga0209801_127007713300026326SoilMLRRIPTPASSTTRLEPPYERNGSGIPVSGAIPITAAMLIAACPATSTVSPAAR
Ga0209474_1067353423300026550SoilMLRRTPTAASITTRLDPPYETNGSGIPVNGATPIAAAMLIAACPQTSAVIPAASRFANGSRDAMA
Ga0209887_103036913300027561Groundwater SandMRLEPPYETNGSGIPVSGARPMTALTLTAAWPQISAVIPAARNFPKGSRQASATLKPA
Ga0209074_1005575823300027787Agricultural SoilMLRRMPTPARATIRLEPPYETNGSGIPVRGARPITAAMLMAAWPQTSIVTPVAS
Ga0209811_1021520813300027821Surface SoilMLRRMPTATSSTTRLEPPYETNGSGIPVNGASPSTAARLIAAWPQTRAVSPAARRFPNGSRHSSAVFSPAHAKST
Ga0209811_1043206813300027821Surface SoilMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPMAAAMLIAAWPQTSAVMPAASRFANGS
Ga0209820_106713713300027956Freshwater SedimentMLRRTPTEASSTTRLEPPYDTKGSGIPVSGATPITAARLIKAWPHTSVVSAAASRFPKGS
Ga0265326_1006591713300028558RhizosphereMTRLEPPYETNGSGIPVSGASPSTAARLIAAWPQMSAVMPAARRFPNGSLQAIASRRPAYAKAQ
Ga0265326_1016875713300028558RhizosphereMPTDRSATTRLEPPYDTKGSGIPVSGASPSTAARLIAACPQTSAVIPAASRLPK
Ga0307318_1005267013300028744SoilMRLDPPYDTNGSVIPVSGASPTTAATLIIAWPQTSAVSPAARRFPKGS
Ga0307282_1039635213300028784SoilMLRRTPTEASETTRLEPPYETNGSVIPVNGASPRTAARLISACPQTSVVKPAASRLPKGSRQ
Ga0307323_1003761233300028787SoilMLRRIPIAASSTTRLEPPYETNGSGIPVSGAIPRAAARLIAACPHTSAVIPVARSFQNGSLQRIAIRNPATER
Ga0265338_1022052133300028800RhizosphereMRLEPPYERNGSGIPVSGAAPTTAAILIAAWPQTRAVMPAASRFANGSLHASATRIPAYANAQKARRT
Ga0307278_1010659923300028878SoilMLRRTPTASSVTTRLEPPYEMKGSGIPVSGASPSTAARLITAWPLTSATTPTANR
Ga0311348_1128496813300030019FenMLRRIPTAPSNISNDEPPYEMNGRVIPVSGATPRTAARLTAACPAMSAVIPTASRLPSGSRQESATRKPAHANVPKAPRTNTVANK
Ga0307501_1012050713300031152SoilMLRRMPTPTSITTRLEPPYETNGSGIPVSGATPMAAAMLIAAWPQTSAVMPAASRFANGSRHAIARRIPA
Ga0299913_1146547913300031229SoilMLRRMPTAASSTSRLVPPNETNGSGMPVSGAIPSTAARFTAACPQTSEVIPAATSLPKG
Ga0318534_1070870523300031544SoilMLRRMPTDTSSTTRLEPPYETNGSGIPVSGASPRTAATLIAAWHATTAVRPAARRLP
Ga0318515_1042791413300031572SoilMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPIAAAMLIAACPQTSAVIPAASRFANGSRHAMARRIPA
Ga0247727_1002642793300031576BiofilmMLRRIPTPARSTTRLEPPYEMKGSGIPVSGAMPRTAARLIAACPQTSAVRPLARSFPKGSRQRR
Ga0318546_1121415023300031771SoilMLRRTPTPTSITTRLEPPYETKGSGIPVRGATPIAAAMLIAACPHTSAVIPAASRFANGSRHAIASRIPA
Ga0307413_1143472423300031824RhizosphereMLRRMPTAASSTSRLVPPKETNGSGIPVSGAIPSTAARLTAAWPQTRDVIPAATSFPKGSRQRRAIV
Ga0302322_10029347733300031902FenMLRRIPTAPSNISNDEPPYEMNGRVIPVSGATPRTAARLTAACPAMSAVIPTASRLPSGSRQESATRKPAHANVPKAPRTNT
Ga0318531_1012734213300031981SoilMLRRTPTPTSITTRLEPPYETNGSGIPVSGATPIAAAMLIAACPHTSAVIPAASRFANGSRHAIASRIPA
Ga0308176_1111167323300031996SoilMLRRTPTESRVTTRLDPPYEMKGSGIPVSGARPSTAARLITAWPLTSATTPTASRFPNGSLQ
Ga0308173_1096421013300032074SoilMLRSTPTPRSDTIRLEPPYETNGSGIPVSGASPSTAARLIAAWPLISAVIPAASRFPKGSLHESASRRPAYANAQ
Ga0335085_1159481913300032770SoilMLRRIPTERSATTRLDPPYETNGSGIPVSGASPTTAATLIAACPQIMAVIPAASRFPNGSLQAIAVRRPAYAKAQ
Ga0335085_1242937023300032770SoilMTRLEPPYETNGSGIPVSGASPSTAARLIAACPHTSAVIPAASRFPNGSLQPIARRSPAYAKAQ
Ga0335081_1219013513300032892SoilMLRRMPTESSATTRLEPPYETNGSGIPVSGASPTTAATLIAAWQQIIAVIPAASRLPNGSLQAIAVRSPAYAKAQ
Ga0335077_1018489833300033158SoilMRLEPPYDTNGSGIPVSGASPTTAATLIAAWQQIIAVIPAASRLPNGSLHAIAVRSPA
Ga0314866_086155_123_3143300033807PeatlandMRLEPPYDTNGSGIPVSGASPTTAATLIAAWQQIIAVIPAASRFPNGSLQAIAVRSPAYAKAQ
Ga0364941_129975_375_5873300034417SedimentMLRRMPTEARNTMRLEPPYETNGSGMPVSGARPMTALTLTAAWPQISAVIPAARNFPKGSRQASATLKPA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.