Metagenome / Metatranscriptome Family F038256

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038256
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	45 residues
Representative Sequence	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHELE
Number of Associated Samples	129
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	96.39 %
% of genes from short scaffolds (< 2000 bps)	86.75 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.277 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.145 % of family members)
Environment Ontology (ENVO)	Unclassified (51.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.976 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.68% β-sheet: 19.72% Coil/Unstructured: 67.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF13727	CoA_binding_3	1.81
PF04392	ABC_sub_bind	1.20
PF02482	Ribosomal_S30AE	0.60
PF01464	SLT	0.60
PF11684	DUF3280	0.60
PF13442	Cytochrome_CBB3	0.60
PF01548	DEDD_Tnp_IS110	0.60
PF02082	Rrf2	0.60
PF09361	Phasin_2	0.60
PF02371	Transposase_20	0.60
PF00043	GST_C	0.60
PF00839	Cys_rich_FGFR	0.60
PF01753	zf-MYND	0.60
PF01738	DLH	0.60
PF04542	Sigma70_r2	0.60
PF12625	Arabinose_bd	0.60
PF05598	DUF772	0.60
PF13432	TPR_16	0.60
PF00196	GerE	0.60
PF03401	TctC	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.20
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.20
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.60
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.60
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.60
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.60
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.60
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.60
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.60
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.60
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.60
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.60
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.60
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.60
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.60
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.60
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
All Organisms	root	All Organisms	30.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
cellular organisms	root	All Organisms → cellular organisms	30.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.41 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.20 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.60 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.60 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.20 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.60 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	0.60 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.60 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.41 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.20 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.60 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.60 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.60 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.60 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.28 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.41 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.20 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.60 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.60 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.60 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10142365	Not Available	579	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1060471	Not Available	671	Open in IMG/M
3300004267\|Ga0066396_10012273	Not Available	1047	Open in IMG/M
3300004633\|Ga0066395_10630862	Not Available	630	Open in IMG/M
3300005332\|Ga0066388_100209676	All Organisms → cellular organisms → Bacteria → Proteobacteria	2573	Open in IMG/M
3300005332\|Ga0066388_101600706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1146	Open in IMG/M
3300005332\|Ga0066388_103421578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300005345\|Ga0070692_10053837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2100	Open in IMG/M
3300005366\|Ga0070659_101727279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	560	Open in IMG/M
3300005435\|Ga0070714_102445209	Not Available	507	Open in IMG/M
3300005436\|Ga0070713_101807115	Not Available	593	Open in IMG/M
3300005438\|Ga0070701_10038497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2420	Open in IMG/M
3300005543\|Ga0070672_101207337	Not Available	674	Open in IMG/M
3300005546\|Ga0070696_101621331	Not Available	556	Open in IMG/M
3300005713\|Ga0066905_101670388	Not Available	584	Open in IMG/M
3300005764\|Ga0066903_101160340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1430	Open in IMG/M
3300005764\|Ga0066903_106713596	Not Available	598	Open in IMG/M
3300006358\|Ga0068871_100866196	Not Available	836	Open in IMG/M
3300006574\|Ga0074056_11086235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300006796\|Ga0066665_11537270	Not Available	521	Open in IMG/M
3300006797\|Ga0066659_10902632	Not Available	738	Open in IMG/M
3300006844\|Ga0075428_102104744	Not Available	583	Open in IMG/M
3300006846\|Ga0075430_101214142	Not Available	621	Open in IMG/M
3300006852\|Ga0075433_11628113	Not Available	557	Open in IMG/M
3300006880\|Ga0075429_100505919	Not Available	1059	Open in IMG/M
3300009100\|Ga0075418_11732238	Not Available	679	Open in IMG/M
3300009100\|Ga0075418_13138557	Not Available	503	Open in IMG/M
3300010046\|Ga0126384_11653895	Not Available	604	Open in IMG/M
3300010048\|Ga0126373_10511913	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300010358\|Ga0126370_12664309	Not Available	501	Open in IMG/M
3300010359\|Ga0126376_12435506	Not Available	571	Open in IMG/M
3300010360\|Ga0126372_10813780	Not Available	927	Open in IMG/M
3300010361\|Ga0126378_11025688	Not Available	928	Open in IMG/M
3300010361\|Ga0126378_12166521	Not Available	634	Open in IMG/M
3300010361\|Ga0126378_12853196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300010366\|Ga0126379_11824556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300010376\|Ga0126381_100835163	Not Available	1324	Open in IMG/M
3300010376\|Ga0126381_103266472	Not Available	640	Open in IMG/M
3300010398\|Ga0126383_10719595	All Organisms → cellular organisms → Bacteria → Proteobacteria	1077	Open in IMG/M
3300010398\|Ga0126383_11806887	Not Available	700	Open in IMG/M
3300010398\|Ga0126383_12077989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300010398\|Ga0126383_12744953	Not Available	575	Open in IMG/M
3300010868\|Ga0124844_1291888	Not Available	556	Open in IMG/M
3300012022\|Ga0120191_10099488	Not Available	598	Open in IMG/M
3300012180\|Ga0153974_1177654	Not Available	509	Open in IMG/M
3300012198\|Ga0137364_11140681	Not Available	586	Open in IMG/M
3300012199\|Ga0137383_11038218	Not Available	596	Open in IMG/M
3300012201\|Ga0137365_10515889	Not Available	878	Open in IMG/M
3300012922\|Ga0137394_10698532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	854	Open in IMG/M
3300012948\|Ga0126375_10483450	Not Available	919	Open in IMG/M
3300012948\|Ga0126375_11295180	Not Available	612	Open in IMG/M
3300012961\|Ga0164302_11485807	Not Available	558	Open in IMG/M
3300012971\|Ga0126369_10118272	Not Available	2436	Open in IMG/M
3300012977\|Ga0134087_10043686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1744	Open in IMG/M
3300012985\|Ga0164308_11549461	Not Available	610	Open in IMG/M
3300015371\|Ga0132258_12561809	Not Available	1275	Open in IMG/M
3300016270\|Ga0182036_10579737	Not Available	897	Open in IMG/M
3300016319\|Ga0182033_11698275	Not Available	572	Open in IMG/M
3300016341\|Ga0182035_10213625	Not Available	1534	Open in IMG/M
3300016357\|Ga0182032_10671701	Not Available	867	Open in IMG/M
3300016371\|Ga0182034_11565875	Not Available	578	Open in IMG/M
3300016387\|Ga0182040_10531168	Not Available	944	Open in IMG/M
3300016387\|Ga0182040_10943782	Not Available	717	Open in IMG/M
3300016404\|Ga0182037_10536733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300016404\|Ga0182037_10981719	Not Available	735	Open in IMG/M
3300016404\|Ga0182037_11694227	Not Available	563	Open in IMG/M
3300016422\|Ga0182039_11840885	Not Available	555	Open in IMG/M
3300016445\|Ga0182038_10960222	Not Available	755	Open in IMG/M
3300018028\|Ga0184608_10401643	Not Available	595	Open in IMG/M
3300018072\|Ga0184635_10040870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1771	Open in IMG/M
3300018075\|Ga0184632_10314370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300018469\|Ga0190270_11666837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	691	Open in IMG/M
3300018469\|Ga0190270_12472022	Not Available	581	Open in IMG/M
3300019887\|Ga0193729_1221211	Not Available	628	Open in IMG/M
3300020581\|Ga0210399_10128887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2082	Open in IMG/M
3300021439\|Ga0213879_10008022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2198	Open in IMG/M
3300021444\|Ga0213878_10150526	Not Available	965	Open in IMG/M
3300021560\|Ga0126371_10393727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1526	Open in IMG/M
3300026319\|Ga0209647_1122232	Not Available	1188	Open in IMG/M
3300027748\|Ga0209689_1093516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1566	Open in IMG/M
3300028379\|Ga0268266_11365865	Not Available	684	Open in IMG/M
3300028754\|Ga0307297_10199445	Not Available	699	Open in IMG/M
3300028768\|Ga0307280_10340615	Not Available	552	Open in IMG/M
3300028778\|Ga0307288_10250050	Not Available	695	Open in IMG/M
3300028809\|Ga0247824_10893308	Not Available	555	Open in IMG/M
3300028828\|Ga0307312_10973419	Not Available	562	Open in IMG/M
3300028878\|Ga0307278_10510134	Not Available	525	Open in IMG/M
3300031226\|Ga0307497_10415436	Not Available	646	Open in IMG/M
3300031546\|Ga0318538_10254949	Not Available	942	Open in IMG/M
3300031561\|Ga0318528_10316744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300031564\|Ga0318573_10291339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873	Open in IMG/M
3300031564\|Ga0318573_10342914	Not Available	801	Open in IMG/M
3300031572\|Ga0318515_10185683	Not Available	1113	Open in IMG/M
3300031573\|Ga0310915_11134717	Not Available	542	Open in IMG/M
3300031668\|Ga0318542_10434182	Not Available	680	Open in IMG/M
3300031682\|Ga0318560_10036498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2358	Open in IMG/M
3300031682\|Ga0318560_10523334	Not Available	643	Open in IMG/M
3300031723\|Ga0318493_10522603	Not Available	657	Open in IMG/M
3300031724\|Ga0318500_10221786	Not Available	910	Open in IMG/M
3300031744\|Ga0306918_10936033	Not Available	674	Open in IMG/M
3300031751\|Ga0318494_10009265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4598	Open in IMG/M
3300031763\|Ga0318537_10197719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300031763\|Ga0318537_10275550	Not Available	623	Open in IMG/M
3300031765\|Ga0318554_10127318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1440	Open in IMG/M
3300031768\|Ga0318509_10076688	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300031770\|Ga0318521_10472084	Not Available	752	Open in IMG/M
3300031771\|Ga0318546_10500026	Not Available	853	Open in IMG/M
3300031780\|Ga0318508_1214350	Not Available	552	Open in IMG/M
3300031781\|Ga0318547_10525958	Not Available	731	Open in IMG/M
3300031793\|Ga0318548_10006998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4229	Open in IMG/M
3300031793\|Ga0318548_10130438	Not Available	1219	Open in IMG/M
3300031794\|Ga0318503_10063350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142	Open in IMG/M
3300031796\|Ga0318576_10146178	Not Available	1101	Open in IMG/M
3300031819\|Ga0318568_10152728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1412	Open in IMG/M
3300031819\|Ga0318568_10254754	Not Available	1087	Open in IMG/M
3300031819\|Ga0318568_10657522	Not Available	652	Open in IMG/M
3300031819\|Ga0318568_10989528	Not Available	519	Open in IMG/M
3300031821\|Ga0318567_10462397	Not Available	720	Open in IMG/M
3300031833\|Ga0310917_10462986	Not Available	863	Open in IMG/M
3300031833\|Ga0310917_10789122	Not Available	641	Open in IMG/M
3300031833\|Ga0310917_11143144	Not Available	519	Open in IMG/M
3300031879\|Ga0306919_10011558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5015	Open in IMG/M
3300031879\|Ga0306919_10575963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300031880\|Ga0318544_10053319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1464	Open in IMG/M
3300031897\|Ga0318520_10438879	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300031910\|Ga0306923_10189808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2348	Open in IMG/M
3300031912\|Ga0306921_11225446	Not Available	834	Open in IMG/M
3300031912\|Ga0306921_11263333	Not Available	819	Open in IMG/M
3300031912\|Ga0306921_11971201	Not Available	623	Open in IMG/M
3300031941\|Ga0310912_10569835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300031941\|Ga0310912_11093324	Not Available	609	Open in IMG/M
3300031945\|Ga0310913_10299327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300031945\|Ga0310913_11052386	Not Available	569	Open in IMG/M
3300031946\|Ga0310910_11555733	Not Available	506	Open in IMG/M
3300031947\|Ga0310909_11279998	Not Available	590	Open in IMG/M
3300031954\|Ga0306926_10396168	Not Available	1704	Open in IMG/M
3300031954\|Ga0306926_10453362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1580	Open in IMG/M
3300031954\|Ga0306926_11204712	Not Available	889	Open in IMG/M
3300031959\|Ga0318530_10500066	Not Available	505	Open in IMG/M
3300031981\|Ga0318531_10010906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3408	Open in IMG/M
3300032001\|Ga0306922_10343661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1601	Open in IMG/M
3300032001\|Ga0306922_11623283	Not Available	642	Open in IMG/M
3300032035\|Ga0310911_10015707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3549	Open in IMG/M
3300032035\|Ga0310911_10045278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2270	Open in IMG/M
3300032042\|Ga0318545_10336036	Not Available	543	Open in IMG/M
3300032043\|Ga0318556_10739677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300032044\|Ga0318558_10109520	Not Available	1301	Open in IMG/M
3300032051\|Ga0318532_10331199	Not Available	540	Open in IMG/M
3300032052\|Ga0318506_10035332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1945	Open in IMG/M
3300032054\|Ga0318570_10033362	All Organisms → cellular organisms → Bacteria → Proteobacteria	2058	Open in IMG/M
3300032063\|Ga0318504_10169141	Not Available	1012	Open in IMG/M
3300032065\|Ga0318513_10412523	Not Available	659	Open in IMG/M
3300032066\|Ga0318514_10607142	Not Available	582	Open in IMG/M
3300032068\|Ga0318553_10304153	Not Available	834	Open in IMG/M
3300032090\|Ga0318518_10359202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300032094\|Ga0318540_10546724	Not Available	558	Open in IMG/M
3300032174\|Ga0307470_10865074	Not Available	707	Open in IMG/M
3300032180\|Ga0307471_102528455	Not Available	650	Open in IMG/M
3300032261\|Ga0306920_100127265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3789	Open in IMG/M
3300033289\|Ga0310914_10198111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1792	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.17%
Host-Associated	Host-Associated	7.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.36%
Plants	Host-Associated → Plants	7.23%
Aquatic	Environmental → Aquatic	1.81%
Fungi	Host-Associated → Fungi	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.02%
Sediment	Environmental → Aquatic → Sediment	1.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.60%
Roots	Host-Associated → Plants → Roots	0.60%
Mycelium	Host-Associated → Fungi → Mycelium	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.33%
Loam	Environmental → Terrestrial → Soil → Loam	9.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.60%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.81%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.60%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.60%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101423651	3300000597	Forest Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWAHTRFCSAHCEGKYELERYNANAKQ
AF_2010_repII_A100DRAFT_10604712	3300000655	Forest Soil	MTGIAMKRCAQCHGKLGLGVRSRILWNGRWWAHTRFCSAHCEGKYELERYNANA
Ga0066396_100122732	3300004267	Tropical Forest Soil	MKMCAWCHGRLGLGVRSRNLWNGRWWVHVRFCSTHCEALYELERYDANAR
Ga0066395_106308621	3300004633	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWAHTRFCSAHCEGKYELERYNAN
Ga0066388_1002096761	3300005332	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRNLWTGRWWVHVRFCSSRCEARYQLEQYDA
Ga0066388_1016007063	3300005332	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWSHVRYCSTHCEARHELERRERQ
Ga0066388_1034215782	3300005332	Tropical Forest Soil	MHGKLGLGVRSRNLWNGRWWAHTRFCSAHCEGKYELERYNA
Ga0070692_100538371	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKMCAQCHGKLGLGVRSRKVWNSRWWVHVRYCSVHCEALHELERYNAR
Ga0070659_1017272791	3300005366	Corn Rhizosphere	MKKKHYCAECGGRLGLGIRFRNLWNGFGWFHLRFCSARCEER
Ga0070714_1024452092	3300005435	Agricultural Soil	MKRCAQCHGKLGLGIRFRNLWNGHWWVHVRFCSAHCEGLYELERYEAD
Ga0070713_1018071152	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKMKRCAQCHERLGLGVRFRNIWNGHWWVHLRFCSTQCEGL
Ga0070701_100384975	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKRCAQCHGPLGLGVRSRNVWNGRWWVHLRYCSTHCEALHELERYNARTN
Ga0070707_1012051552	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSQCLRSLVLGVRSRNMWNGRWWVRVRYCSTHCEALHELERYDSKAKRREGQEQRC*
Ga0070672_1012073372	3300005543	Miscanthus Rhizosphere	MKRCAQCHGKLGLGVRSRNVWNGCWWAHVRYCSAHCEALHELERYNAR
Ga0070696_1016213311	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNGYSDEKMAQCHGKLSLGVRSRKVWNRRWWVQVRYCSAHCEALHELERYNAR
Ga0066905_1016703881	3300005713	Tropical Forest Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHCEGL
Ga0066903_1011603405	3300005764	Tropical Forest Soil	MKRCALCHGRMGLGARFRNIWNGRWWVHVRFCSARCEGIYEVRRNEAAKR
Ga0066903_1067135961	3300005764	Tropical Forest Soil	HGKLGLGLRARNLWNGRWWIHVRYCSTRCEALHLERRQRR*
Ga0068871_1008661961	3300006358	Miscanthus Rhizosphere	MKRCAQCQGKLGLGFRSRTVWNGRWRVLVHYCSIHCEALDEPERYKARGHR
Ga0074056_110862352	3300006574	Soil	MKKCAQCHGKLGLGVRFRNVWNGRWWVHVRYCSAHCEALHELERYNARANR
Ga0066665_115372702	3300006796	Soil	MKFKCSHCRGKLGLGVRFRRLWMGSWWQHLRFCSKRCEESYETEAR
Ga0066659_109026323	3300006797	Soil	MKRCAQCHRRLGLGVRFRRFWNGRWWVNTRFCSAQCELIYEQERNAATK
Ga0075428_1006778924	3300006844	Populus Rhizosphere	MKRCAQCHGKLGLGVRSRKVWIGRWWVHVRYCSAHCEAVHKLERHNARANRG
Ga0075428_1021047442	3300006844	Populus Rhizosphere	MKRCAKCHGKLGLGVRSRNVWTGRWWVHVLYCSNDCEALHELERYNARAKRG
Ga0075430_1012141421	3300006846	Populus Rhizosphere	MKRCAQCHGKLGLGVRARNVWNGRWWLRIRFCSTYCEALYELERYDGN
Ga0075433_116281132	3300006852	Populus Rhizosphere	MKRCAQCQGKLGLGVRSRNLWNGRWWVHVRFCSTHCEALYELERYDATARR
Ga0075429_1005059191	3300006880	Populus Rhizosphere	MKRCAQCEGRLGLGVRARNLWNGLWWVPAHFCSTHCEARYELERYDAN
Ga0075418_117322383	3300009100	Populus Rhizosphere	MKRCAQCEGKLGLGVRARNLWNGLWWVHVHFCSTHCEARYELERYDTNA
Ga0075418_131385571	3300009100	Populus Rhizosphere	MKRCAQCHGKLGLGVRSRKVWNGRWWVLVRYCSAHCEAVH
Ga0126384_116538951	3300010046	Tropical Forest Soil	MKRCAQCHGRLGLGVRSRNLWNGRWWAHARFCSAHCEGKYELERYN
Ga0126373_105119132	3300010048	Tropical Forest Soil	MKRCALCHGRLGLGTRFRNLWNGRWWVHVRFCSVRCEGIYEVRRNEA
Ga0126370_111928801	3300010358	Tropical Forest Soil	MKTCAQCHGKLGLGVRARSLRIGFWRVTVRFCSVHCEARYERERQRTLLP
Ga0126370_126643091	3300010358	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRIFWNGRWWAHTRFCSAHCEGNYELERYNANA
Ga0126376_124355061	3300010359	Tropical Forest Soil	MKSRAQCHGKLGLGVRARDVWNGRWWIHIRFSSARCEAFYQLER
Ga0126372_108137801	3300010360	Tropical Forest Soil	MKRCALCHGKLGLGARFRNIWNGRWWVHVRFCSIRCEGIYRVK
Ga0126378_110256882	3300010361	Tropical Forest Soil	MKTCAQCHGKLGLGVRSRNLWNGLWWVHVLFCSTHCETLY
Ga0126378_121665211	3300010361	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHEVERRQR
Ga0126378_128531962	3300010361	Tropical Forest Soil	MERCALCRGKLGLGTRFRNIWNGRWWVHVRFCSVRCEGIYEVKRN
Ga0126379_118245562	3300010366	Tropical Forest Soil	MKRYAQCHGKLGLGVRARNLWNGRWWIRVRYCSTRCEALHLER
Ga0126381_1008351631	3300010376	Tropical Forest Soil	MTRCARCRGKLGLGVRSRNVWNGRWWVHVRYCSTHCEALHELERYDAR
Ga0126381_1032664722	3300010376	Tropical Forest Soil	MKRCALCHGKLGLGARFRNIWNGRWWVHVRFCSVRCEV
Ga0126383_107195953	3300010398	Tropical Forest Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHCE
Ga0126383_118068872	3300010398	Tropical Forest Soil	MERCALCRGKLGLGTRFRNMWNGRWWVHARFCSIRCEGIYEI
Ga0126383_120779891	3300010398	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRNLWNGLWWVHVRFCSIHCEALYEL
Ga0126383_127449532	3300010398	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRNLWSGLWWVHVRFCSIHCEALY
Ga0124844_12918881	3300010868	Tropical Forest Soil	MKTCAQCYGKLGLGIRSRNVWNGRWCAHTRFCSARCEDKYELQRYNA
Ga0120191_100994882	3300012022	Terrestrial	MKRCAQCHGKLGLGVRSRNLWNGRWWVHVRYCSIHCEARHELERRERQI
Ga0153974_11776541	3300012180	Attine Ant Fungus Gardens	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHCEGLYELERYEAN
Ga0137364_111406811	3300012198	Vadose Zone Soil	MKRCALCHGKLGLGIRSRNLWNGRWWAHTRFCSARCEDKYEL
Ga0137383_110382181	3300012199	Vadose Zone Soil	MERCAQCQGKLGLGVRSRKVWNSRWGVHVRYCSAHCEALHDDARAEGG
Ga0137365_105158891	3300012201	Vadose Zone Soil	MKKCAQCHGKLGLGVRSRNLWNGRWWVLVRFCSTLCEARHELERR
Ga0137394_106985321	3300012922	Vadose Zone Soil	VATPRCAQCHGKLGLGVKFRNLWNGDWWEHFRFCSNCCQE
Ga0126375_104834501	3300012948	Tropical Forest Soil	MKRCALCHGKLGLGARFRNIWNGRWWVHVRFCSVRCEAI
Ga0126375_112951803	3300012948	Tropical Forest Soil	MKRCAQCHGKLGLGVRSRKVWIGRWWVHVRYCSAHCEAVHKLERH
Ga0164302_114858072	3300012961	Soil	MKRCALCHGKLGLGARFRNIWNGRWWVHIRFCSVRCEAIYEVKRNDAAKQ
Ga0126369_101182725	3300012971	Tropical Forest Soil	MGTAMKRCAQRHGKLGLGARSRNVWNGRWWVHVVYCSTHCEALHELERYDA
Ga0134087_100436863	3300012977	Grasslands Soil	MKRCAQCHRKLGLGVRSRNLWNGHWWVHTRFCSTHCELIYEQERK
Ga0164308_115494612	3300012985	Soil	MKRCAQCHGKLGLGVRSRNLWNGHWWVHIRFCSTHCEALHELE
Ga0132258_125618091	3300015371	Arabidopsis Rhizosphere	MKRCAQCHGKLGLGVRSRNVWKGRWWVHVRFCSAHCEGLHERERYNARVN
Ga0182036_105797373	3300016270	Soil	MKTCAQCHGKLGLGVRSRNLWNGLWWVHVLFCSTHCETLYVLE
Ga0182033_116982751	3300016319	Soil	MGIAMKRCAQRHGKLGLGARSRNVWNGRWWVHVVYCSTHCEALHELERYDA
Ga0182035_102136251	3300016341	Soil	MKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALYELERYDARAKPG
Ga0182032_106717012	3300016357	Soil	MESCALCHGKLGLGTRFRNIWNGRWWVHVRFCSVRCEGIYEV
Ga0182034_115658752	3300016371	Soil	MKRCAQCHGKLGLGVRSRNFWNGRWWAHTRFCSAHCEGKYELERYNAN
Ga0182040_105311681	3300016387	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHEVE
Ga0182040_109437821	3300016387	Soil	MKRCALCHGKLGLGARFRNIWNGRWWVHVRFCSVRCEAIYEV
Ga0182037_105367331	3300016404	Soil	AMKTCAQCHGKLGLGVRARNVWNGRWWVHIRFCSARCEALYQLERRDAMNEKRAPRD
Ga0182037_109817192	3300016404	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHELERRQR
Ga0182037_111382151	3300016404	Soil	MKRCARCHGKLGLGVRSRNVWNGRWWVRVLYCSTHCEALHELERYDARAKLRDGKQQRCS
Ga0182037_116942271	3300016404	Soil	MIMKRGIAMKRCAQCHGKLGLGARSRNVWNGRWWVHVVYC
Ga0182039_118408852	3300016422	Soil	MAMKRCARCHGKLGLGVRSRNVWNGRWWVHVLYCSAHCEALHELERYDASA
Ga0182038_109602221	3300016445	Soil	MKRCAHCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEARHELER
Ga0184608_104016431	3300018028	Groundwater Sediment	MKRCAQCHGKLGLGLHSRKVWNGRWWVHVRYCSAHCEAHHEL
Ga0184635_100408705	3300018072	Groundwater Sediment	MKNCAQCHGKLGLGVRARNLWDGRWWVHVRFCSTHCE
Ga0184632_103143701	3300018075	Groundwater Sediment	MQECAQCHGRLGLGVRSRNLWNGRWWIHIRFCSVHCEALYELARYDANGPAR
Ga0190270_116668372	3300018469	Soil	MKKRRCTECGGKLGLGVRFRNLWDGFSWVHLRYCSAS
Ga0190270_124720222	3300018469	Soil	MKKHCCAECGGKLGLGLRFRNLWDGFSWFHLRFCSA
Ga0193729_12212111	3300019887	Soil	MKRCAQCHGKLGLGLHSRKVWNGRWWVQVRYCSAHCE
Ga0210399_101288871	3300020581	Soil	MERCALCRGKLGLGTRFRNIWNGRWWVHVRFCSVRCEGIYE
Ga0213879_100080225	3300021439	Bulk Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHEVERRQRPKRRW
Ga0213878_101505261	3300021444	Bulk Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHC
Ga0126371_103937272	3300021560	Tropical Forest Soil	MKKRCAQCGGKLGLGVRFRNLWNGHGWVHLRFCSGLC
Ga0209647_11222322	3300026319	Grasslands Soil	MKRCAQCHGKLGLGVRFRNLWNGRWWVHLRFCSTHCEGLYELERYEANAR
Ga0209689_10935161	3300027748	Soil	MKRCAQCHGKLGLGVRSRNLWSGRWWIHVRYCSTHCEARHELERRERQISL
Ga0268266_113658651	3300028379	Switchgrass Rhizosphere	MRRCAQCHGRLGLGVRFRNLWSGHGWVHLRFCSTRCEGIFKQDRE
Ga0307297_101994452	3300028754	Soil	MKRCAQCHGKLGLGLHSRKVWNGRWWVHVRYCSAHCEAHH
Ga0307280_103406151	3300028768	Soil	MKRCAQCHGKLGLGVRFRNFWNGDGWHHLRFCSSYCETLYELVRRGQK
Ga0307288_102500501	3300028778	Soil	MKRCAQCQGKLGLGLHSRKVWNGRWWVHVRYCSAHCEAH
Ga0247824_108933081	3300028809	Soil	MKGCAQCHGKLGLGVRFRNVWNGYWWVHLRFCSTQCEGLYEWYRSEASAR
Ga0307312_109734191	3300028828	Soil	MKRCAQCQGKLGLGVRSRNLWKRGWWVHVRFCSTHCEALYE
Ga0307278_105101341	3300028878	Soil	MKKCAQCHGKLGLGVRSRNLWNGHWWVHVRFCSTH
Ga0307497_104154361	3300031226	Soil	MKRCAQCHGKLGLGVRFRNVWNGRWWVHVRYCSAHCEALHEL
Ga0318538_102549491	3300031546	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHEVER
Ga0318528_103167443	3300031561	Soil	MKRCAQCHGKLGLGVRSRNEWNGRWWVHVLYCSTHCEALYELERYDARAKRG
Ga0318573_102913391	3300031564	Soil	MTGIAMKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELERYD
Ga0318573_103429141	3300031564	Soil	MKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALYE
Ga0318515_101856832	3300031572	Soil	MRRCAQCHGKLGLGVRFRNLWNGRWWVHLRFCSTHCEGLYELERYESNA
Ga0310915_111347171	3300031573	Soil	MERCALCHGKLGLGTRFRNIWNGRWWVHVRFCSVRCEDIYEVK
Ga0318542_104341821	3300031668	Soil	MKRCAQCHGKLGLGARSRNVWNGRWWVHVVYCSTHCEALHELERYDARVK
Ga0318560_100364981	3300031682	Soil	MKRCAQCHGKLGLGVRARNLWNGRWWIHVRYCSTRCEALHLERH
Ga0318560_105233341	3300031682	Soil	MTGIAMKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELERY
Ga0318493_105226031	3300031723	Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHCEGLYEL
Ga0318500_102217861	3300031724	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTH
Ga0306918_109360331	3300031744	Soil	MKRCSQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHELE
Ga0318494_100092651	3300031751	Soil	MKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALYELERY
Ga0318537_101977191	3300031763	Soil	MKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELQRYDARAKLGRH
Ga0318537_102755501	3300031763	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWAHTRFCSAHCEG
Ga0318554_101273181	3300031765	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHE
Ga0318509_100766883	3300031768	Soil	MKRCALCHGKLGLGARFRNIWNGRWWVHVRFCSVRCEVIYEVE
Ga0318521_104720844	3300031770	Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLPFCSAHCEGLYEL
Ga0318546_105000261	3300031771	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWVHTRFWAHCEGKYELERYNANAK
Ga0318508_12143502	3300031780	Soil	MTGIAMKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELERYDARAK
Ga0318547_105259582	3300031781	Soil	MKRCAQCHEKLGLGMRFRNLWNGRWWVHLRFCSAHCEGLY
Ga0318548_100069981	3300031793	Soil	MKRCAQCHGKLGLGVRARNLWNGRWWIRVRYCSTRCEALHL
Ga0318548_101304381	3300031793	Soil	MKRCAQCHGKLGLGVRFRNLWNGRWWVHLRFCSTHCEGLYE
Ga0318503_100633501	3300031794	Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHCEGLYELERYE
Ga0318576_101461783	3300031796	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHELE
Ga0318568_101527281	3300031819	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCE
Ga0318568_102396442	3300031819	Soil	MKRCARCHGKLGLGVRSRNVWNGRWWVHVLYCSAHCEALHELEGYDASAKRKS
Ga0318568_102547543	3300031819	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEAL
Ga0318568_106575221	3300031819	Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHCEGLYELERYEANA
Ga0318568_109895281	3300031819	Soil	MNGFAMKRCARCHGKLGLGVRSRNLWNGRWWVRVRYCSTHCEALHE
Ga0318567_104623972	3300031821	Soil	MERCALCHGKLGLGTRFRNIWNGRWWVHVRFCSVRCEGIYEVKRNNA
Ga0310917_104629861	3300031833	Soil	MKRCAQCHGKLGLGVRSRKVWNGRWWVQVRYCSAHCEALHELERYNARAN
Ga0310917_107891221	3300031833	Soil	MKTCAQCHGKLGLGVRSRNLWNGLWWVHVLFCSTHCETLYVLEHAN
Ga0310917_111431441	3300031833	Soil	MSIAMKRCAHCRGKLGLGVRSRNVWNGRWWVRVRYCSTHCEALHELERYDAK
Ga0306919_100115586	3300031879	Soil	MKRCAQCHGKLGLGVRFRNLWNGRWWVHLRFCSTHCEGLYEL
Ga0306919_105759633	3300031879	Soil	MTGIAMKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELERYDARAKP
Ga0318544_100533191	3300031880	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHEVERHQRQ
Ga0318520_104388792	3300031897	Soil	MTGIAMKRCAQYHGKLGLGVRSRNVWNGRWWVHVRY
Ga0306923_101898081	3300031910	Soil	MKRCAECHGKLGLGVRFRNLWNGRWWWVHLRFCSTHC
Ga0306921_112254462	3300031912	Soil	MESCALCHGKLGLGTRFRNIWNGRWWVHVRFYSVRCE
Ga0306921_112633331	3300031912	Soil	MKTCAQCHGKLGLGVRARNVWNGRWWVHIRFCSARCEALYQLERRDAMN
Ga0306921_119712011	3300031912	Soil	MKRCAQCREKLGLGVRFRNLWNGRWWVHLRFCSAHCEGLYELERYEA
Ga0310912_105698353	3300031941	Soil	MTGIAMKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEAFHELERYDARAK
Ga0310912_110933242	3300031941	Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHC
Ga0310913_102993271	3300031945	Soil	MKRCAQCHGKLGLGVRARNLWNGRWWIRVRYCSTRCEA
Ga0310913_110523863	3300031945	Soil	MKRCAPCLRRLGLGARFRNMWSGRWWVHVRFCSARC
Ga0310910_115557333	3300031946	Soil	MKRCAQCRGKLGLGVRSRNVWNGRWWVRVRYCSTHCEALHELERYDAKRGR
Ga0310909_112799981	3300031947	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALHELERR
Ga0306926_103961683	3300031954	Soil	MESCALCHGKLGLGTRFRNIWNGRWWVHVRFYSVRCEGIYEVKRN
Ga0306926_104533623	3300031954	Soil	MKRCVQCRGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELERYDASARRRGRGFPAAR
Ga0306926_112047122	3300031954	Soil	MKRCAQFHGKLGLGVRSRNLWNRRWWIHVRYCSTHCEALHEVERRQRQT
Ga0318530_105000661	3300031959	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWVRVCYCSAH
Ga0318531_100109061	3300031981	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWAHTRFCSARCEGKYELERYN
Ga0306922_103436614	3300032001	Soil	MCAERKAAMKRCALCHGRLGLGARFRNIWIGRWWVHVRFCSV
Ga0306922_116232831	3300032001	Soil	MKRCAQCHEKLGLGVRFRNLWNGRWWVHLRFCSAHCEG
Ga0310911_100157075	3300032035	Soil	MKRCAQCHGKLGLGVRFRNLWNGRWWVHLRFCSTHCEGL
Ga0310911_100452784	3300032035	Soil	MKTCAQCHGKLGLGVRFRNLWNGRRWVHLRFCSAYCEGLYELA
Ga0318559_101261852	3300032039	Soil	MKRCARCHRKLGLGVRSRNFWDGRWWVHTRFCSAHCELVYEHERNDAAKQ
Ga0318545_103360361	3300032042	Soil	MKRCAQCHGKLGLGVRARNLWYGRWWIRVRYCSTRCE
Ga0318556_107396771	3300032043	Soil	MKRCALCHGKLGLGVRSRNEWNGRWWVHVLYCSTHCEALYELERYDARAKRG
Ga0318558_101095204	3300032044	Soil	MNGFAMKRCARCHGKLGLGVRSRNLWNGRWWVRVRYCSTHCEALHELERYDSKAKRREG
Ga0318532_103311992	3300032051	Soil	MKRCAQYHGKLGLGARPRNVWSGRWWVHVLYCSTHCEALHE
Ga0318506_100353324	3300032052	Soil	MKRCAQCHGKLGLGVRARNLWNGRWWIRVRYCSTRCE
Ga0318570_100333621	3300032054	Soil	MKRCALCHGRLGLGTRFRNIWNGRWWVHVRFCSARCEGIYEVRQNEAAK
Ga0318504_101691411	3300032063	Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWIHVRYCSTHCEALH
Ga0318513_104125232	3300032065	Soil	MKRCAQYHGKLGLGARPRNVWNGRWWVHVLYCSTHCEALHELERYDA
Ga0318514_106071421	3300032066	Soil	MKRCAQCHGKLGLGARSRNVWNGRWWVHVVYCSTHCEALHELER
Ga0318553_103041531	3300032068	Soil	MKRCAQCHGKLGLGVRFRNLWNGRWWVHLRFCSTHCEGLY
Ga0318518_103592021	3300032090	Soil	MKRCAQCHGKLGLGVRSRNLWSGRWWIHVRYCSTHCEARHELE
Ga0318540_105467241	3300032094	Soil	MKRCAQCHEKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELQRYDARAK
Ga0307470_108650741	3300032174	Hardwood Forest Soil	MKGCAQCHGKLGLGVRFRNVWNGYWWVHLRFCSTQCEG
Ga0307471_1025284551	3300032180	Hardwood Forest Soil	MKRCAQCHGKLGLGVRSRNLWNGRWWVRVRYCSAHCDALHELERYNA
Ga0306920_1001272651	3300032261	Soil	MTGIAMKRCAQCHGKLGLGVRSRNVWNGRWWVHVLYCSTHCEALHELERYDA
Ga0310914_101981113	3300033289	Soil	MKRCALCHGKLGLGIRSRNLWNGRWWTHTRFCSARCEGNYELERYN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038256

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences