Metagenome / Metatranscriptome Family F037873

Basic Information
Family ID	F037873
Family Type	Metagenome / Metatranscriptome
Number of Sequences	167
Average Sequence Length	70 residues
Representative Sequence	MKRLLFQNKIVYRSLTLAFLFLVTLTMSAQWASPPEEGGVPAYNAGPPPKGTKLPPLLTKADLWGADAQ
Number of Associated Samples	142
Number of Associated Scaffolds	167

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.39 %
% of genes near scaffold ends (potentially truncated)	98.80 %
% of genes from short scaffolds (< 2000 bps)	88.02 %
Associated GOLD sequencing projects	135
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (86.228 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.778 % of family members)
Environment Ontology (ENVO)	Unclassified (23.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.898 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118 1JGI12627J18819_103752831 2JGI12627J18819_104317051 3JGIcombinedJ26739_1009371761 4Ga0062385_106838212 5Ga0062387_1005183961 6Ga0063455_1005799412 7Ga0066388_1024965781 8Ga0070713_1013403132 9Ga0070733_100787283 10Ga0070733_104028381 11Ga0070733_108954741 12Ga0070732_101741983 13Ga0066692_106610282 14Ga0070761_102218911 15Ga0070762_110618792 16Ga0070763_101322781 17Ga0070763_103541031 18Ga0070763_104987812 19Ga0070764_104896042 20Ga0070766_102942761 21Ga0080026_100166633 22Ga0070717_108963812 23Ga0070717_116962352 24Ga0075028_1003771752 25Ga0075029_1002668731 26Ga0075029_1004328972 27Ga0075017_1000120311 28Ga0075019_110989991 29Ga0075019_111221632 30Ga0075030_1012730011 31Ga0075014_1002723092 32Ga0075014_1004398131 33Ga0075014_1008197611 34Ga0070712_1001644091 35Ga0097621_1018660911 36Ga0066660_105975751 37Ga0079221_107613531 38Ga0075426_106317491 39Ga0099830_115561732 40Ga0116138_11912732 41Ga0116125_12159931 42Ga0126384_110025691 43Ga0074045_105478272 44Ga0074044_103920242 45Ga0074044_105041222 46Ga0126376_101268311 47Ga0126376_122836262 48Ga0126372_126957261 49Ga0136449_1024389672 50Ga0137393_112497222 51Ga0137380_112485131 52Ga0137381_104517801 53Ga0137387_107404182 54Ga0137395_102117373 55Ga0137395_103182131 56Ga0137359_116844761 57Ga0164303_114934851 58Ga0164307_118099471 59Ga0157369_103957751 60Ga0157372_115623692 61Ga0181527_11056333 62Ga0181531_107511542 63Ga0182018_100313141 64Ga0182024_107299201 65Ga0182024_116547022 66Ga0181516_103237992 67Ga0182005_11622672 68Ga0187818_102902571 69Ga0187820_11475652 70Ga0187801_104795981 71Ga0187817_108758072 72Ga0187781_104074591 73Ga0187782_102948962 74Ga0187816_105472022 75Ga0187805_102324502 76Ga0187874_103590111 77Ga0187864_103942372 78Ga0187875_103035031 79Ga0187858_102131433 80Ga0187766_102741282 81Ga0187765_113537532 82Ga0187784_107632371 83Ga0187772_113649902 84Ga0187769_100277685 85Ga0187769_106170983 86Ga0187769_110833461 87Ga0187771_106362621 88Ga0187770_100203731 89Ga0066667_112065261 90Ga0066662_112989182 91Ga0193728_10227941 92Ga0210399_107446321 93Ga0210401_110616441 94Ga0215015_104995961 95Ga0210406_106962961 96Ga0210396_103719061 97Ga0210388_112910222 98Ga0210389_103305633 99Ga0210387_105769762 100Ga0210383_111472421 101Ga0210394_114495811 102Ga0210384_104604451 103Ga0210384_112087591 104Ga0210390_107183121 105Ga0210402_100830115 106Ga0210402_104847093 107Ga0210409_103918143 108Ga0210409_116379831 109Ga0126371_100116298 110Ga0212123_106904852 111Ga0224564_11344071 112Ga0207930_11500431 113Ga0207685_100307911 114Ga0207699_111944031 115Ga0207695_100161219 116Ga0207693_100998913 117Ga0207652_114707032 118Ga0207700_111544362 119Ga0208777_10146511 120Ga0208778_10076302 121Ga0209890_102344632 122Ga0209059_10399071 123Ga0209161_100679091 124Ga0209219_10860242 125Ga0209115_10556942 126Ga0208827_11121392 127Ga0208991_11917931 128Ga0208989_100150764 129Ga0209656_104970071 130Ga0209274_105302121 131Ga0209169_104670221 132Ga0209275_103379252 133Ga0209380_105892111 134Ga0311339_102804011 135Ga0302306_101198421 136Ga0302181_104672011 137Ga0311357_112718001 138Ga0310039_102046961 139Ga0265740_10165172 140Ga0075395_109823582 141Ga0307499_101548392 142Ga0170824_1061299141 143Ga0302325_1001864214 144Ga0302324_1000146141 145Ga0302324_1017749552 146Ga0302324_1034885331 147Ga0265316_111079161 148Ga0310686_1179203274 149Ga0307476_102196531 150Ga0307476_106711762 151Ga0307474_100183511 152Ga0307469_120352081 153Ga0307478_102942321 154Ga0310910_115061732 155Ga0311301_122273791 156Ga0335085_106949063 157Ga0335079_107322991 158Ga0335078_103462701 159Ga0335078_110711732 160Ga0335081_112871131 161Ga0335071_107012112 162Ga0335072_110223612 163Ga0335073_1000111639 164Ga0335073_110559131 165Ga0335077_104368803 166Ga0335077_112705891 167Ga0370515_0485140_3_221
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118 1JGI12627J18819_103752831 2JGI12627J18819_104317051 3JGIcombinedJ26739_1009371761 4Ga0062385_106838212 5Ga0062387_1005183961 6Ga0063455_1005799412 7Ga0070713_1013403132 8Ga0070733_100787283 9Ga0070733_104028381 10Ga0070733_108954741 11Ga0066692_106610282 12Ga0070761_102218911 13Ga0070762_110618792 14Ga0070763_104987812 15Ga0080026_100166633 16Ga0075028_1003771752 17Ga0075029_1002668731 18Ga0075029_1004328972 19Ga0075019_111221632 20Ga0075030_1012730011 21Ga0075014_1004398131 22Ga0079221_107613531 23Ga0116138_11912732 24Ga0126384_110025691 25Ga0074045_105478272 26Ga0074044_105041222 27Ga0126372_126957261 28Ga0136449_1024389672 29Ga0137393_112497222 30Ga0137395_102117373 31Ga0137395_103182131 32Ga0137359_116844761 33Ga0182018_100313141 34Ga0182024_107299201 35Ga0181516_103237992 36Ga0187820_11475652 37Ga0187817_108758072 38Ga0187781_104074591 39Ga0187782_102948962 40Ga0187816_105472022 41Ga0187766_102741282 42Ga0187765_113537532 43Ga0187784_107632371 44Ga0187772_113649902 45Ga0187769_106170983 46Ga0066667_112065261 47Ga0066662_112989182 48Ga0215015_104995961 49Ga0210388_112910222 50Ga0210389_103305633 51Ga0210383_111472421 52Ga0210394_114495811 53Ga0210384_104604451 54Ga0126371_100116298 55Ga0207700_111544362 56Ga0209059_10399071 57Ga0209219_10860242 58Ga0208991_11917931 59Ga0209656_104970071 60Ga0311339_102804011 61Ga0302181_104672011 62Ga0311357_112718001 63Ga0302324_1017749552 64Ga0302324_1034885331 65Ga0307476_106711762 66Ga0307474_100183511 67Ga0307478_102942321 68Ga0310910_115061732 69Ga0311301_122273791 70Ga0335079_107322991 71Ga0335078_103462701 72Ga0335078_110711732 73Ga0335071_107012112 74Ga0335073_1000111639 75Ga0335077_112705891
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1Ga0137380_112485131 2JGI12627J18819_103752831 3JGI12627J18819_104317051 4JGIcombinedJ26739_1009371761 5Ga0062385_106838212 6Ga0062387_1005183961 7Ga0063455_1005799412 8Ga0066388_1024965781 9Ga0070733_100787283 10Ga0070733_108954741 11Ga0070732_101741983 12Ga0070763_101322781 13Ga0070763_103541031 14Ga0070763_104987812 15Ga0070766_102942761 16Ga0075029_1002668731 17Ga0075029_1004328972 18Ga0075019_110989991 19Ga0075030_1012730011 20Ga0075014_1004398131 21Ga0066660_105975751 22Ga0079221_107613531 23Ga0116125_12159931 24Ga0126384_110025691 25Ga0074045_105478272 26Ga0126376_122836262 27Ga0126372_126957261 28Ga0136449_1024389672 29Ga0137393_112497222 30Ga0137395_102117373 31Ga0137395_103182131 32Ga0137359_116844761 33Ga0164303_114934851 34Ga0164307_118099471 35Ga0157372_115623692 36Ga0181527_11056333 37Ga0181531_107511542 38Ga0182018_100313141 39Ga0182024_107299201 40Ga0187818_102902571 41Ga0187820_11475652 42Ga0187801_104795981 43Ga0187817_108758072 44Ga0187781_104074591 45Ga0187782_102948962 46Ga0187874_103590111 47Ga0187766_102741282 48Ga0187765_113537532 49Ga0187784_107632371 50Ga0187772_113649902 51Ga0187769_100277685 52Ga0187769_106170983 53Ga0187771_106362621 54Ga0187770_100203731 55Ga0066667_112065261 56Ga0066662_112989182 57Ga0210399_107446321 58Ga0210401_110616441 59Ga0215015_104995961 60Ga0210406_106962961 61Ga0210388_112910222 62Ga0210389_103305633 63Ga0210383_111472421 64Ga0210390_107183121 65Ga0210402_100830115 66Ga0210402_104847093 67Ga0126371_100116298 68Ga0212123_106904852 69Ga0224564_11344071 70Ga0207930_11500431 71Ga0207699_111944031 72Ga0207700_111544362 73Ga0209059_10399071 74Ga0209161_100679091 75Ga0209219_10860242 76Ga0208827_11121392 77Ga0208991_11917931 78Ga0209656_104970071 79Ga0209274_105302121 80Ga0209169_104670221 81Ga0311339_102804011 82Ga0302306_101198421 83Ga0302181_104672011 84Ga0311357_112718001 85Ga0265740_10165172 86Ga0310686_1179203274 87Ga0307476_102196531 88Ga0307476_106711762 89Ga0307474_100183511 90Ga0307478_102942321 91Ga0310910_115061732 92Ga0311301_122273791 93Ga0335085_106949063 94Ga0335079_107322991 95Ga0335078_103462701 96Ga0335078_110711732 97Ga0335071_107012112 98Ga0335073_1000111639 99Ga0335077_104368803 100Ga0335077_112705891 101Ga0370515_0485140_3_221
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.24% β-sheet: 0.00% Coil/Unstructured: 58.76%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 167 Family Scaffolds
PF00717	Peptidase_S24	55.69
PF00988	CPSase_sm_chain	5.99
PF02787	CPSase_L_D3	1.20
PF04555	XhoI	1.20
PF00144	Beta-lactamase	1.20
PF03572	Peptidase_S41	0.60
PF02311	AraC_binding	0.60
PF00034	Cytochrom_C	0.60
PF01979	Amidohydro_1	0.60
PF12833	HTH_18	0.60

COG ID	Name	Functional Category	% Frequency in 167 Family Scaffolds
COG0505	Carbamoylphosphate synthase small subunit	Amino acid transport and metabolism [E]	11.98
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.20
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.20
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.20
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.60
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.60

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.23 %
Unclassified	root	N/A	13.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.23 %
Unclassified	root	N/A	13.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.23 %
Unclassified	root	N/A	13.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.15 %
Unclassified	root	N/A	13.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.16 %
Unclassified	root	N/A	13.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.20 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.16 %
Unclassified	root	N/A	13.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.16 %
Unclassified	root	N/A	13.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.20 %
Unclassified	root	N/A	13.77 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.60 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.20 %
Unclassified	root	N/A	13.77 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10375283	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300001867\|JGI12627J18819_10431705	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300002245\|JGIcombinedJ26739_100937176	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300004080\|Ga0062385_10683821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	659	Open in IMG/M
3300004091\|Ga0062387_100518396	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300004153\|Ga0063455_100579941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	723	Open in IMG/M
3300005332\|Ga0066388_102496578	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300005436\|Ga0070713_101340313	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005541\|Ga0070733_10078728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2083	Open in IMG/M
3300005541\|Ga0070733_10402838	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.81%
Host-Associated	Host-Associated	4.19%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	17.37%
Plants	Host-Associated → Plants	4.19%
Terrestrial	Environmental → Terrestrial	78.44%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	10.78%
Peat	Environmental → Terrestrial → Peat	4.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.59%
Roots	Host-Associated → Plants → Roots	0.60%
Sediment	Environmental → Aquatic → Sediment	5.99%
Soil	Environmental → Terrestrial → Soil	73.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.60%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.60%
Loam	Environmental → Terrestrial → Soil → Loam	17.37%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.78%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.59%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.37%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.60%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.99%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.60%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.79%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.20%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.60%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.59%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.99%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M

Showing 1 to 10 of 142 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_103752831	3300001867	Forest Soil	MTRHIFQSKITYRSLTIACLFLVTTLTVSAEWGALPEEGGIPAYNAAPPPKGTKLPPVLTKADLWGADAQAP
JGI12627J18819_104317051	3300001867	Forest Soil	MPGFLRSKIVYRSLTVVFLLLVTLSVSAQWMSPQEEGGVPAYNAAAPPKGHKLPPILGKS
JGIcombinedJ26739_1009371761	3300002245	Forest Soil	MTHLRLMRKHYAYRAFTLIFLFAVTLTMSAEWTAPVEEEAGIPAYNAGPPPKGTKLPATLSKADLWGADAQ
Ga0062385_106838212	3300004080	Bog Forest Soil	MTRRMVQNKFAYRSLTLAFLFIVTLSMSAVWAAPPADENGVPAFNAAPPAKGEKLPPLLTKADLWGGDAQNTFQTHAY
Ga0062387_1005183961	3300004091	Bog Forest Soil	MTGHFYHQFIREKLGYRALTLAFLFLVTLTLSAQWAAPQALAQGAAPVPAYNDGPPPKGTKLTPLLTKADLW
Ga0063455_1005799412	3300004153	Soil	MTRGLFRSQIAYRSLTVVFLFLVTLSVSAQWSSPQEESGTPAYNAAPPPKGTKLPAILAKSDLWGADAQYPYQTHAYELAAK
Ga0066388_1024965781	3300005332	Tropical Forest Soil	MMPDLIRNKIVYRSLTVVFLFLVTLSVSAQWMSPQEEGGVPAYNSAPPPKGHKLPPILGK
Ga0070713_1013403132	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLFRNVIVYRTLTLAFLFLVTLTVSAQWSSPQEEGGVPAFNAAPPPKGTKLPPILTKADLWGADAQNAYQTHAY
Ga0070733_100787283	3300005541	Surface Soil	MTRLLQSKIVYRGLTLAFLFLVALSLSAQWAKPQEGSGVPAYNSGPPLKGTKLPAILTKADLWGADAQYPYQTHAYELAAK
Ga0070733_104028381	3300005541	Surface Soil	MKLVFQNKMVYRSLTLAFLFLVTITMSAQWSSPQEEGGVPAFNAGPPPKGTKLPPILTK
Ga0070733_108954741	3300005541	Surface Soil	MSSSPLPRKYVHRTLTLVFLFAVTLSVSAQWNAQDEAEGGIPAYNAGPPPKGTKLPATLTKADLWGADAQYPYQTHA
Ga0070732_101741983	3300005542	Surface Soil	MTRLLQHKILYRGLTLAFLFLVTLSLSAEWAAPQEEGGVPAYNAGPPPKGTKLPPTLAKSDLWGADAQYPYQTHAYEL
Ga0066692_106610282	3300005555	Soil	MTFLRANKILYRCLTLAALFLVTMTVTAQWTSSQEGGGVPAYNAGPPPKGTKLPPILGKD
Ga0070761_102218911	3300005591	Soil	MTRRLSQNKIVYRCLTLVFLFLVTLTMSAEWAASPQEPSGVPAFNAGPPPKGTTLPP
Ga0070762_110618792	3300005602	Soil	MTSTRLLQNKYAHRALTLIFLLTVTLTVSAQWPAQQDEGGIPAYNAGPPAKGTILPAILTKADLWGADAQ
Ga0070763_101322781	3300005610	Soil	MTPSRLLENKYSHRALSLIFLLTVTLTGSAQWPAQQDEGGIPAYNAGPPPNGTKLPAILTKADLWGADAQYPYQ
Ga0070763_103541031	3300005610	Soil	MTPSNLLHNKYVYRALTLIFLLTVTLTMSAQWIAQEEEGSGIPAYNAGPPPKGTKLPDILTKDQLWGADAQYP*
Ga0070763_104987812	3300005610	Soil	MTRRLLHNKILRRSLTLCFLFMVTLSLSAEWTSPQEEAGVPAYNAGPPPKGTKLPPLLTKADLWDADAQNAYQTHAYELAAKI
Ga0070764_104896042	3300005712	Soil	MKLVFQNKMVYRSLTLAFLFLVTITMSAQWSSPQEEGGVPAFNAGPPPKGTKLPPILTKA
Ga0070766_102942761	3300005921	Soil	MTPSRLLESKYAHRVLTLIFLLTVTLTTSAQWPAQQDEGGIPAYNAGPPPTDAKLPAILTKADLWGADAQYPYQ
Ga0080026_100166633	3300005952	Permafrost Soil	MTRSMLQNKIVYRSLTLAFVFLVTLSVSAEWVAVPDEGGIPAYNAGPPPKGTKLPPLLAKSDLWGADAQNA
Ga0070717_108963812	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLLLQNKIVYRSLTLAFLFLVTLTMSAQWASPPEEGGVPAFNAGPPPKGTKLPPLLTKTDLWGADAQNPYQTHAYE
Ga0070717_116962352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLFRNVIVYRTLTLAFLFLVTLTVSAQWSSPQEEGGVPAFNAAPPPKGTKLPPILTKADLWGADAQNAYQ
Ga0075028_1003771752	3300006050	Watersheds	MRRLLQNQNTIVYRGLTLAFLFLVTLSLSAEWAAPQEETGGVPAFNSGPPPKGTKLPALLTK
Ga0075029_1002668731	3300006052	Watersheds	MTRLMLRNPIVYRSLTLAFVFVVTLCMSAQWAAPQEEEGGVPAFNSAPPPKGTKLPPVLTKGDLWGADAQNTYQ
Ga0075029_1004328972	3300006052	Watersheds	MTVRLQQHKTAYRSLTLAFLFVVTLSMSAQWAAPQKEEGVPAFNSAPPPKGTRLPAILTKAGLWGADAQYPHQAHAYELAAKI
Ga0075017_1000120311	3300006059	Watersheds	MTVRLQQHKTAYRSLTLAFLFVVTLSMSAQWAAPQKEEGVPAFNSAPPPKGTRLPAILTKADLWGADAQYPHQAHAYELAAKI
Ga0075019_110989991	3300006086	Watersheds	MITGFFQNKIVYRSLTLAFLFVITLTMSAQFASPQEEGGGVPAFNAGPPPKGTKLPPLLTKAD
Ga0075019_111221632	3300006086	Watersheds	MTSRFFRNKIVYRSLTLASLFVITLTMSAQWASPQEEGGGVPAYNAGPPPKGTKLPPLLTKAD
Ga0075030_1012730011	3300006162	Watersheds	MKFLMKNKLVYRGLTLAFLFLVTLTMSAQWTTTDDEKGVPAYNAGPPPKGTKLPPILTKADLWGPDAQHDYQ
Ga0075014_1002723092	3300006174	Watersheds	MTVRLQQHKAVYRSLTLAFLFLVTLSMSAQWAAPQKEEGVPAFNSAPPPKGTKLPAILTKADLWGADAQYPHQAHAYELAAKI
Ga0075014_1004398131	3300006174	Watersheds	MISRFFQNKIAYRSLTLASLFVITLAMSAQFAAPQEEGGGVPAYNAAPPPKGTKLPPLLTKADLWGADAQNPYQTHAYE
Ga0075014_1008197611	3300006174	Watersheds	MTSRFFRNKIVYRSLTLASLFVITLTMSAQWASPQEEGGGVPAYNAGPPPKGTKLPPLLTKADLWGADAQNPYQTHAY
Ga0070712_1001644091	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLFRNVVVYRTLTLAFLFVVTLSVSAQWSSPQEESGGVPAFNAAPPPKGTKLPPILTKADLWGADAQNAYQTHAYE
Ga0097621_1018660911	3300006237	Miscanthus Rhizosphere	MNRLLMQNKIVYRSLTLCFLFLVTLTMSAEWASPQEEGGVPAYNAGPPPKGTKLPP
Ga0066660_105975751	3300006800	Soil	MTHRLFRNQLVYRSLTLAFLFLVTLGMSAQWAAPQEQGGVPAYNAGPPPKGTKLPPILTKTDLWGADAQQPYQTHA
Ga0079221_107613531	3300006804	Agricultural Soil	MIVRLARNKIVSRSLALAFLFIVTLSVSAQWTAPQEAGGVPAYNAGPPPKGTKLPPILTK
Ga0075426_106317491	3300006903	Populus Rhizosphere	MTRLFRNVIVYRTLTLAFLFLVTLTVSAQWSSPQEEGGGVPAFNAAPPPKGTKLPPILTKADLWGADAQN
Ga0099830_115561732	3300009088	Vadose Zone Soil	MKRLLFQNKIVYRSLTLAFLFLVTLTMSAQWASPPEEGGVPAYNAGPPPKGTKLPPLLTKADLWGADAQNPYQT
Ga0116138_11912732	3300009552	Peatland	MTRFLQNKILRRALTLCFLFMVTLSLSAQWTSPQEEAGVPAYNAGPPPKGTKLPPLLTKADLWGADA
Ga0116125_12159931	3300009628	Peatland	MKLVFQNKMIYRSLTVAFLFLVTLTMTAQWSSPQEDGEIPAFNAGPPPKGTKLPPILTKADLWGA
Ga0126384_110025691	3300010046	Tropical Forest Soil	MTRLPSQQLVFRSFTLACLFLVTLTVSAQWTSPQEVGGVPAYNAGPPPKGTKLPAILNKADLWGQDAQHAFQTH
Ga0074045_105478272	3300010341	Bog Forest Soil	MISSLRQDKIVYRSLTLAFLFLVTLTMSAEWAAPQDEGSGVPAFNAGPPPKGTRLPPILTKADLWGADAQNPY
Ga0074044_103920242	3300010343	Bog Forest Soil	MTPSRLLESKYAHRTLTLVFLLTVTLTTSAQWPAQQDEGGIPAYNAGPPPKGAKLPAILTKADLWGADAQYPYQTHA
Ga0074044_105041222	3300010343	Bog Forest Soil	MTSLTSLPHKIVYRSLTLAFLFLVTLSVSAQWAAPQEESGVPAYNAAPPPKGTKLPSILTRADLWGAD
Ga0126376_101268311	3300010359	Tropical Forest Soil	MTRLPSQKLVVRSVTLACLFLVTLTVSAQWTSPQEVGGIPAYNAGPPPKGTKLPAILTKADLWG
Ga0126376_122836262	3300010359	Tropical Forest Soil	MIRNVLHSKTAYRGLTVVFLFLVTMSVSAQWASPQEEGGLPAYNAAPPPKGTKLPAILTKADLWGADAQYPYQTHAYE
Ga0126372_126957261	3300010360	Tropical Forest Soil	MPALVQSKTVYRSLTVVFLFLVTLSLSAQWMSPQEQGGPPAFNAAPPPKGHKLPPILGKSELWGAD
Ga0136449_1024389672	3300010379	Peatlands Soil	MGVVGGFRANPVTIATLKAYMTGMLQDKIVFRGFTLAFLFLVTLTLSAQWAAPQLEGSGVPAYNAGPPPKGTKLPPILDKTALWGADSNPYQTHA
Ga0137393_112497222	3300011271	Vadose Zone Soil	MTARRLLQRKMVYRGLTLAFLFLVTLTMSAEWSMSQEESGIPAYNAGAPPKGTKLPPILGKDQLWG
Ga0137380_112485131	3300012206	Vadose Zone Soil	MKRLLFQNKIVYRSLTLAFLFLVTLTMSAQWASPPEEGGVPAYNAGPPPKGTKLPPLLTKADLWGADAQ
Ga0137381_104517801	3300012207	Vadose Zone Soil	MSRLLLQNKIVYRSLTLCFLFLVTLTMSAEWASPQEEGGVPAYNAGPPPKGTKLPPLLTKADL
Ga0137387_107404182	3300012349	Vadose Zone Soil	MSRLLLQNKIVYRSLTLCFLFLVTLTMSAEWASPQEEGGVPAYNAGPPPKGTKLPPLLT
Ga0137395_102117373	3300012917	Vadose Zone Soil	MTARRLLEQRIVYRSLTLAFIFVVTLMTSAGWSTSQEQSGTPAYNAGPPPKGTKLPPILSKDQ
Ga0137395_103182131	3300012917	Vadose Zone Soil	MTSTRLVQSKYAHRVLTLIFLLTVTLTVSAQWTAQHDEGGIPAYNAGPPPKGTKLPAVLPKTDLWGKDAQYPYQTHGYELA
Ga0137359_116844761	3300012923	Vadose Zone Soil	MTPSRLLQNKIAHRALTLIFLFTVTLTMSAQWASHEEAGGIPAYNAGPPPKGTKLPAVLAKDQLWGADAQFPYQTHA
Ga0164303_114934851	3300012957	Soil	MTRSLFRSKIVYRGLTVVFLFLVTLSVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPILGK
Ga0164307_118099471	3300012987	Soil	MTRLFRNVIVYRTLTLAFLFVVTLSVSAQWSSPQEEGGGVPAFNAAPPPKGTKLPPILTKADLWGADAQNAYQTHAYELAAK
Ga0157369_103957751	3300013105	Corn Rhizosphere	MTRLFRNVIVYRTLTLAFLFLVTLTVSAQWSSSQEEGGVPAFNAAPPPKGTKLSAILTKADLWGADAQNAYQTHA
Ga0157372_115623692	3300013307	Corn Rhizosphere	MTRRLYRTPIVYRSLTLAFLFLVTLTVSAQWSSPQEQGGVPAYNAAPPPKGTKLPAVLTKADLWGADAQYPYQTHAYELAA
Ga0181527_11056333	3300014153	Bog	MTSLTSLPHKIVYRSLTLAFLFLVTLSVSAQWAAPQEESGVPAYNAAPPPKGTKLPSILTKADLWGADAQY
Ga0181531_107511542	3300014169	Bog	MTPSRLFQNKYAHRALTLIFLLTVTLTVSAQWPAQQDEGGIPAYNAGPPPKGTILPAVLTKADLWGADAQ
Ga0182018_100313141	3300014489	Palsa	LIEESTMTPSRLLQNKYAKRALALSFLLTVTLTMSAQWTAQEEEGGIPAYNAGPPPKGTKLPPILTKDQLWG
Ga0182024_107299201	3300014501	Permafrost	MNIREEFMTRSLYQDKFVYRSLTVVFLFLVTTLSMSAEWASLPEEGGVPAYNAGPPPKGTKLPPILTKADLWGADAQ
Ga0182024_116547022	3300014501	Permafrost	MNIREEFMTRFLYEDKFVYRSLTVVFLFLVTTLSMSAEWASLPEEGGVPAYNAGPPPKGTKLPPILTKADLWGADAQ
Ga0181516_103237992	3300014655	Bog	MTPSRLLQNLLQNKTAYRALTLIFLLTVTLTMSAQWTAQEQEEEGGIPAYNAGPPPKGTKLPALLTKADLWGA
Ga0182005_11622672	3300015265	Rhizosphere	MTRLFRNVMVYRTLTLAFLFLVTLTVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPILTKADLWGADAQNAYQ
Ga0187818_102902571	3300017823	Freshwater Sediment	MTSRFFRSKIVYRSLTLASLFVITLTMSAQWASPQEEGGGVPAYNAGPPPKGTKLPPLLTKADLWGADAQNPYQTHAYE
Ga0187820_11475652	3300017924	Freshwater Sediment	MTSIRLRRKYVYRALTLVFLFAVTLTVSAQWAAPEDEGGIPAYNAGPPPKGTKLPAILSKSELWGAD
Ga0187801_104795981	3300017933	Freshwater Sediment	MTRRLSRNKIAYRSLTLAFLFFVTLTVSAGWAAPQEGGEVPAYNAGPPPKGTKLPPLLTKADLWGADAQFPYQTHAYELA
Ga0187817_108758072	3300017955	Freshwater Sediment	MMLRLSRNKLVYRCLTLGFLFLVTLSVSAQWSSQEEGGIPAYNAGPPPKGTTLPPLLTK
Ga0187781_104074591	3300017972	Tropical Peatland	MTRLFQNKTARRGLTLAFLFLATLSMSAQWTSPQEEGEVPAYNAAPPPKGTKLPPILT
Ga0187782_102948962	3300017975	Tropical Peatland	MTCPLRHNKALYRSLTFAFLFFVTLSMSAMWAAPQGQGAVPAYNSAPPPKGTTLPPILTKADLWGADAQFSYQTHAY
Ga0187816_105472022	3300017995	Freshwater Sediment	MTRRVLQNKIVYRSLTVAFLFLVTTLSLSAEWGTMPEEGGIPAYNAGPPPKGTK
Ga0187805_102324502	3300018007	Freshwater Sediment	MTSRFFRSKIVYRSLTLASLFVITLTMSAQWASPQEEGGGVPAYNAGPPPKGTKLPPLLTKADLWGAD
Ga0187874_103590111	3300018019	Peatland	MTRRVLQNKIVYRSLTVAFLFLVTTLSLSAEWGTMPEEGGIPAYNAGPPPKGTKLPPLLTKSDLWGA
Ga0187864_103942372	3300018022	Peatland	MTRLTSLPHKIVYRSLTLAFLFLVTLSVSAQWAAPQEESGVPAYNAAPPPKGTKLPSILTKADLWGADAQYAFQTHAYDLAAKIPTVL
Ga0187875_103035031	3300018035	Peatland	MTRFLQNKILRRALTLCFLFMVTLSLSAQWTSPQEEAGVPAYNAGPPPKGTKLPPLLTKADLWGADAQYPYQTHAYELAA
Ga0187858_102131433	3300018057	Peatland	MTRLTSLPHKIVYRSLTLAFLFLVTLSVSAQWAAPQEESGVPAYNAAPPPKGTKLPSILTKADLWGADAQYAFQTHAY
Ga0187766_102741282	3300018058	Tropical Peatland	MTGCSTIKMLYRSLALVVLFFVTLTMTAAWAAPPAEETGVPAYNAGPPPKGMKLPAILDKTALWGADANPYQTHAYELAAKI
Ga0187765_113537532	3300018060	Tropical Peatland	MKERFAHSRFLHRGLTLAFLFLVTLTMSAQWAAQQEQGGIPAYNSAPPPKGTKLPPILTKADLWGADA
Ga0187784_107632371	3300018062	Tropical Peatland	MIRAFRSTVVYRSLTLAFLFLVTLSVSAQFMAPQEQGEIPAYNAGPPPKGTKLPPILTTADLWGADAQNSYQTHAYEL
Ga0187772_113649902	3300018085	Tropical Peatland	MTRLRRNRTLYRSLSFAFLFFVTLSMSAMWAAPQGPGQVPAYNSAPPPKGTKLPPILTKADLWG
Ga0187769_100277685	3300018086	Tropical Peatland	MKPSSLLQNKYAHRALTLIFLLTVTMTMSAQWVAQEEEGGIPAYNAGPPPKGTKLPAILTKADLWGEDAQYPY
Ga0187769_106170983	3300018086	Tropical Peatland	MTHLLQNKIVYRCLALAFIFFVTLSTSAQWVTPQEEGDVPAYNAAPPPKGTTLPPILTKADLWGADAQ
Ga0187769_110833461	3300018086	Tropical Peatland	MKPSSLRQNKYAHRALTLIFLLTVTMTMSAQWIAQEEEGGIPAYNAGPPPKGTKLPAILTKADLWGEDAQYPY
Ga0187771_106362621	3300018088	Tropical Peatland	MRRLLQNRLVSRGLTLAFLFLVALSTSQQWAASQQESGVPAYNAGPPPKGTKLPAILTKADLWGADAQYAFQTHAYELA
Ga0187770_100203731	3300018090	Tropical Peatland	MTPSRLLHRKYAHRALTLIFLLTVTLTMSAQWTAQEEEGGIPAYNAGPPPKGTKLPPILTKADLWGADAQYPYQAHA
Ga0066667_112065261	3300018433	Grasslands Soil	MTRHLTQNKFIHRGLTLAFLFLVTLTMSAQWASQKEEGGVPAYNAAPPPKGTKLPPILTKADLCGADGQSPYHTDAYDLAA
Ga0066662_112989182	3300018468	Grasslands Soil	MTARFLIGNKAIRRALTLAFLFLLTLTMSAQFSAQQEESGIPAYNAAPPPKGTKLPAVLMKDQLWGADAQYPYQTHAYELAS
Ga0193728_10227941	3300019890	Soil	MTSTHLVQSKYAHRVFTLIFLLTVTLTMSAQWTAQQDEGGIPAYNAGPPPKGTKLPAVLPKSDLWGKDAQYTYQ
Ga0210399_107446321	3300020581	Soil	MTHPLLQNKIVHRTLTLAFLFLVTLTMSAQWTSPQEEGGGVPAYNAGPPPKGTKLPRLLTKADLWGADAQN
Ga0210401_110616441	3300020583	Soil	MTPNRLLQSKTAHRTLTLIFLLTVTLTMSAQWTAQEEEGGIPAYNAGPPPKGTKLPAVLTKADLWGADAQHPYQ
Ga0215015_104995961	3300021046	Soil	MTARRLLEHKIVYRGLTLAFIFVVTLTMSAEWSTSQEESGTPAYNAGPPPKGTKLPAILTKDQLWGADAQNPYQTHAYDLAAK
Ga0210406_106962961	3300021168	Soil	MKLGLFRSKIVYRSLTVVFLFLVTLTVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPILAKSELWGA
Ga0210396_103719061	3300021180	Soil	MISRFFQTKIVYRSLTLGSLFLITLSVSAQWASPQEEGGVPAYNAGPPPKGTKLPPLLT
Ga0210388_112910222	3300021181	Soil	MTRHFLHNKIVHRSLILAFLFLTLTMSWASPSPFSGEEGGVPAFNAGPPPKGTKLPPLLTKADLW
Ga0210389_103305633	3300021404	Soil	MRTFLESKSIRRALGVAFVFLLTLSVSAPFTASASSPQAEGAVPAYNAAPPAKGTKLPPILTKADLWGADAQNAYQTHAY
Ga0210387_105769762	3300021405	Soil	MTRRIFQNQFVYRSLTLAFLFIVTLSMSAVWAAPPADENGVPAFHAAPPAKGEKLPPLLTKADLWG
Ga0210383_111472421	3300021407	Soil	MTPSRILQNKYVHRTVTLIFLLTVTLTTSAQWPATQDEGGIPAYNAGPPPAGTKLPAILTRADLWGADAKYPYQTHAYELASK
Ga0210394_114495811	3300021420	Soil	MTRPLLRNKIVHRTLTLAFLFLVTLTMSAQWTSPQEEGGGVPAYNAGPPPTGTKLPRL
Ga0210384_104604451	3300021432	Soil	MKAREEPMTRHLLQNKIVHRSLTLAFLFLVTLSMSAQWTSPQKGEGGIPAYNAAPPPRGTKLPPLLT
Ga0210384_112087591	3300021432	Soil	MTRRILQNQLVYRSLTLAFLFVVTLSLSAQWAAPQEETGGVPAFNSGPPPKGTKLPPLLTKA
Ga0210390_107183121	3300021474	Soil	MISRFFQTKIVYRSLTLASLFLITLSVSAQWASSQEEGGVPAYNAGPPPKGTKLPPLLI
Ga0210402_100830115	3300021478	Soil	MTRRIIQNQLVYRSLTLAFLFVVTLSLSAQWAAPQEEAGGVPAFNAGPPPKGTKLPPLLTKADLWGADAQNPYQTHAYEL
Ga0210402_104847093	3300021478	Soil	MKAREEPMTRHLLQNKIVHRSLTLAFLFLVTLSMSAQWTSPQKGEGGIPAYNAAPPPRGTKLPALLTKADLWGADAQ
Ga0210409_103918143	3300021559	Soil	MTRRSLQSKIVHRTLTLAFLFLVTLTMSAQWTSPQEEGGGVPAYNAGPPPKGTKLPRLLT
Ga0210409_116379831	3300021559	Soil	MTRHLFHNQIVHRSLILAFLFVTLTMSWASPSPFSGEEAGVPAFNAGPPPKGTKLPPL
Ga0126371_100116298	3300021560	Tropical Forest Soil	MTRLLRNTIVHRAFALAFLFVVTLTMSAQWTAPQEEGSVPAYNAAPPPKGTKLPPI
Ga0212123_106904852	3300022557	Iron-Sulfur Acid Spring	MTCSMLQNKIVYRSLTLAFVFLVTLSVSAEWVALPDEGGVPAYNAGPPPKGTKLPPLLAKSDLWGADAQNAYQT
Ga0224564_11344071	3300024271	Soil	MTATRLFRNKYVHRALTLVFLLTVTLTTSAQWSAQQDEGGIPAYNAGPPPKGAKLPAILTKADLWGADAQYPYQTHAYE
Ga0207930_11500431	3300025604	Arctic Peat Soil	MITGFFQNKIVYRSLTLAFLFLVTLSMSAQWTSPQEEGGGVPAYNAGPPPKGTKLPALLTKADLWGADA
Ga0207685_100307911	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MNRLLMQNKIVYRSLTLCFLFLVTLTMSAEWASPQEEGGVPAYNAGPPPKGTKLPPLLTKADLWGADAQNPYQTHAYE
Ga0207699_111944031	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLVQNKIIYRGLTLAFLFLVTLSLSAEWAAPQEEAGGVPAFNSGPPPKGTKLPALLTKADLWGADAQNPYQT
Ga0207695_100161219	3300025913	Corn Rhizosphere	MTRLFRNVIVYRTLTLAFLFLVTLTVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPILTKADLWGAD
Ga0207693_100998913	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKLGLFRSKIVYRSLTVVFLFLVTLTVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPI
Ga0207652_114707032	3300025921	Corn Rhizosphere	MTRLFRNVIVYRTLTLAFLFLVTLTVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPILTKADLWGADAQNAYQT
Ga0207700_111544362	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTHHLQNKFFYRTLTLAFLFAVTLSLVGPVGAAPPQEEGGGVPAYNAGPPPKGTKLPPLLTKA
Ga0208777_10146511	3300025996	Rice Paddy Soil	MTRRLYRSPIVYRSLTLAFLFLVTLTMSAQWSSPQEQGGVPAYNAAPPPKGTKLPPVLTKADL
Ga0208778_10076302	3300026025	Rice Paddy Soil	MTRRLYRSPIVYRSLTLAFLFLVTLTMSAQWSSPQEQGGVPAYNAAPPPKGTKLPPVLTKADLWGAD
Ga0209890_102344632	3300026291	Soil	MTRLLQNKIIYRGLTLAFLFLVTLTLSAEWAAPQEEAGGVPAFNSGPPPKGTKLPALLTKADLWGADAQNAYQTHAYE
Ga0209059_10399071	3300026527	Soil	MTRLAQNKLLYRSLTLFFIFLVTLTMSAQWAAPQQEEGGVPAYNAGSPAKGTKLPALLTKADLWGADAQ
Ga0209161_100679091	3300026548	Soil	MTFLRANKILYRCLTLAALFLVTMTVTAQWTSSQEGGGVPAYNAGPPPKGTKLPPILGKDQLWGADAQYPYQAHAYEL
Ga0209219_10860242	3300027565	Forest Soil	MTRGLPQNKFVYRSLTLAFLFLVTTLSMSAEWASLPLPENGVVPAYNAAPPPKGTKLPPILAKSDLWGADA
Ga0209115_10556942	3300027567	Forest Soil	MRTFLESKRIRRALAVAFVFLLTLSVSAPFTASASSPQAEGAVPAYNAAPPAKGTKLPPILTKADLWGA
Ga0208827_11121392	3300027641	Peatlands Soil	MTRRLLQNQTVYRSLSLAFVFLVTLSMSAQWAAPQEEGGGVPAYNAGPPPKGTRLPPILTKADLWGADAQNAYQTHAYELAA
Ga0208991_11917931	3300027681	Forest Soil	MTARRLFEHKVVYRSLTLAFLFVVTLTMSAEWLTSPEEGGTPAFNAGPPPKGT
Ga0208989_100150764	3300027738	Forest Soil	MTARRLFEHKIVYRSLTLAFVFVVALTMSAEWLTSPEEGGTPAFNAGPPP
Ga0209656_104970071	3300027812	Bog Forest Soil	MTRWMVRPMTRRFLQSQIVYRILALAFLFLTLSLSSQWASPSVFASDDAGVPAYNAGPPPKGTKLPPILTKADLWGADAANPYQTHA
Ga0209274_105302121	3300027853	Soil	MTRRLSQNKIVYRCLTLVFLFLVTLTMSAEWAASPQEPSGVPAFNAGPPPKGTTLPPLLTKAD
Ga0209169_104670221	3300027879	Soil	MKLVFQNKMVYRSLTLAFLFLVTITMSAQWSSPQEEGGVPAFNAGPPPKGTKLPPILTKADLWG
Ga0209275_103379252	3300027884	Soil	MTSTRLLQNKYAHRALTLIFLLTVTLTVSAQWPAQQDEGGIPAYNAGPPAKGTILPAILTKADLWGADAQHPDQTHAYELAAK
Ga0209380_105892111	3300027889	Soil	MTPSRLLESKYAHRVLTLIFLLTVTLTTSAQWPAQQDEGGIPAYNAGPPPTDAKLPAILTKADLWGADAQYPYQTHAYELAA
Ga0311339_102804011	3300029999	Palsa	MTPVRLRQQKFVYRALTLIFLFLVTLTMSAQWADPAQDDVPAFNAGPPPKDAKLPP
Ga0302306_101198421	3300030043	Palsa	MTPSRLLASKFAHRALALVFLFALTLTTSAQWTAQQEEGGIPAYNAGPPPKGTKLPAILGRDELWGADAQNPYQTHA
Ga0302181_104672011	3300030056	Palsa	MMPSRPLRRKFAHRALTLIFLSLVTLATSAQWARSQEEPEGAGIPAYNAGPPLKGTTLPPILTRDQLWGADAQYSYQ
Ga0311357_112718001	3300030524	Palsa	MMPESIMRRLIHHQFLYRGLALAFLFLVTLTMSAQWAAPSGDEPSVPAYNSGPPPKGTKLPPILTKADLWGSDAQNPY
Ga0310039_102046961	3300030706	Peatlands Soil	MTHRLLQNKILYRTLTLAFLFLVTLTMSAQWTSPQEEGDVPAYNAGPPPKGTKLPRLLTKADLWGADA
Ga0265740_10165172	3300030940	Soil	MTPRRPLQNRYIHRAITLVFLLTVTLTMSAQWPAQQDEGGIPAYNAGPPSAGTKLPPLLTKADLWDADAKY
Ga0075395_109823582	3300030973	Soil	MTRLLQNKIVYRSLTLAFLFLITLTMSAQWASPAEEGGVPAFNAGPPPKGTKLPPLLTKTDLWGADAQNPYQT
Ga0307499_101548392	3300031184	Soil	MTRGLFRSKIVHRSLTVVFLFLVTLSVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPILGKSELWG
Ga0170824_1061299141	3300031231	Forest Soil	MTRRLLQNKIVYRSLTLAFLFLVTLSMSAQWASPPEEGAVPAYNAGPPPKGTKLPPLL
Ga0302325_1001864214	3300031234	Palsa	MTPSRLLQNKYAHRALTLIFLLTVTLTMSAQWTAQEDEGGIPAYNAGPPPKGTKLPALLTKADLWGAD
Ga0302324_1000146141	3300031236	Palsa	MTPSRLLASKFAHRALALVFLFALTLTTSAQWTAQQEEGGIPAYNAGPPPKGTKLPAILGRDELWGADAQNPYQTH
Ga0302324_1017749552	3300031236	Palsa	MPSRLLASKFAHRALALVFLFALTLTTSAQWTAQQEEGGIPAYNAGPPPKGTKLPAILGRDELWGADAQNPYQTH
Ga0302324_1034885331	3300031236	Palsa	MQPSSWFRSKFAHRALTLIFLLTVTLTMSAQWIAQEEEGSGIPAYNAGPPPKGTKLPAILTKDQLWGADAQYPY
Ga0265316_111079161	3300031344	Rhizosphere	MISRLFQNKIVYRSLTLAFLFVITLTMSAQFASPQEEGGGVPAYNAGPPPKGTKLPPLLTKADLWGADAQNPYQTHA
Ga0310686_1179203274	3300031708	Soil	MTPSRRLQGKYAHRALTLIFLVTVTLTMSAQWSAQQDEGGIPAYNAGPPPAGTKLPVLLTKADLWGA
Ga0307476_102196531	3300031715	Hardwood Forest Soil	MTPSVLRRKYAYRALTLIFLLTVTLTLSAQWTAQEDEGGVPAYNAGPPPKGAKLPAVLTKDQLWGADAQ
Ga0307476_106711762	3300031715	Hardwood Forest Soil	MTGQILFETKIVYRGLTVALLFALTLTMSAQWSAQQGESGVPAYNAAPPPKGSKLPAILMKDQLWGADAQYPYQIRAYELA
Ga0307474_100183511	3300031718	Hardwood Forest Soil	MTRRLEEHKFAYRSLTLVFLFMVTLTMAAQWAAPQEDKGLPAYNAAPPPKGTKLPAILTKADLWGADAQNAYQTHAYE
Ga0307469_120352081	3300031720	Hardwood Forest Soil	MKLGLFRSKIVYRSLTVVFLFLVTLTVSAQWSSPQEEGGVPAYNAAPPPKGTKLPPILAKSEL
Ga0307478_102942321	3300031823	Hardwood Forest Soil	MTRHLLNSQTLRRGLTLAFLFLVTLSVSAQWTSPQEESGVPAYNAAPPPKGTKLPPILTKAD
Ga0310910_115061732	3300031946	Soil	MFKRGLSLTFVLALTMTMTAQWSSSQDESGGQIPAYNAGPPPKGTTLPPILTKDQLWGDDAQFP
Ga0311301_122273791	3300032160	Peatlands Soil	MAYVTDMLREKTVFRGFTLVFLFLVTLTLSAQWAAPTSEGSGVPAYNAGPPPKGTKLPPILDKTALWGADSNPYQTHA
Ga0335085_106949063	3300032770	Soil	MICRLTRNKLVFRAFALGFLFIVTLSVSAQWSAPQEPNGTPAYNAGPPPKGTKLPPILTKADLW
Ga0335079_107322991	3300032783	Soil	MTRRLRTNPATYRCFTLAFLFVVTLTMSAQWAMPEQEQGVPAYNAAPPPKGT
Ga0335078_103462701	3300032805	Soil	MSLLNNKIVYRSLTLVFLFIVTLTLSAEWVAPQENGSIPAYNAGPPPKGTKLAPFLTKADLWGADAQFP
Ga0335078_110711732	3300032805	Soil	MTHMLKNTIVYRAFTLAFLFLVTASMSAPWASSQGEGPVPAYNAAPPPKGTKLPPILTKADLWGADA
Ga0335081_112871131	3300032892	Soil	MTRLLRHKILYRGLTLAFLFLVTLSLSAEWAAPQEEGGVPAYNAGPPPKGTKLPPILTKA
Ga0335071_107012112	3300032897	Soil	MTQGFVQSKIVYRSLTVVFLFLVTLSVSAQWVSQDAENGVPAYNAAPPPKGTKLPPILTKADLWGADAQNP
Ga0335072_110223612	3300032898	Soil	MTRLLRHKILYRGLTLAFLFLVTLSLSAEWAAPQEEAGVPAYNAGPPPKGTKLPPILTKADLWGDDAQYPYQTHA
Ga0335073_1000111639	3300033134	Soil	MRPYLQSKFVYRSLTVAFVFVLTLSVSAEFTVPQEEGGVPAYNAGPPPKGTKLPPILT
Ga0335073_110559131	3300033134	Soil	MTRLLRHKILYRGLTLAFLFLVTLSLSAEWAAPQEEAGVPAYNAGPPPKGTKLPPILTKA
Ga0335077_104368803	3300033158	Soil	MIHFPQRRIVYRGLTLAFLFLATLTLSAQWAKPQEEGGVPAYNAGPPPRGTKLPPILTKADLWGADAQYPYQTHAY
Ga0335077_112705891	3300033158	Soil	MTRLFQHRILYRGLTFAFLFLVTLSLSAEWVAPQEEGGVPAYNAGPPPKGTKLPPILTKADLWGTDA
Ga0370515_0485140_3_221	3300034163	Untreated Peat Soil	MPPSSLLRSKFAHRALTLIFLLTVTLSMSAQWIAQEEEGSGIPAYNAGPPAKGTKLPAILIKDQLWGADAQYP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037873

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences