NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F037392

Metagenome / Metatranscriptome Family F037392

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F037392
Family Type Metagenome / Metatranscriptome
Number of Sequences 168
Average Sequence Length 65 residues
Representative Sequence MNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRRRPPE
Number of Associated Samples 137
Number of Associated Scaffolds 168

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.51 %
% of genes near scaffold ends (potentially truncated) 24.40 %
% of genes from short scaffolds (< 2000 bps) 90.48 %
Associated GOLD sequencing projects 131
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.929 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.881 % of family members)
Environment Ontology (ENVO) Unclassified
(36.310 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 42.55%    β-sheet: 0.00%    Coil/Unstructured: 57.45%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 168 Family Scaffolds
PF02738MoCoBD_1 5.36
PF08241Methyltransf_11 1.19
PF16868NMT1_3 0.60
PF00188CAP 0.60
PF13505OMP_b-brl 0.60
PF13641Glyco_tranf_2_3 0.60
PF00296Bac_luciferase 0.60
PF09335SNARE_assoc 0.60
PF01702TGT 0.60
PF14681UPRTase 0.60
PF02515CoA_transf_3 0.60
PF01546Peptidase_M20 0.60
PF03734YkuD 0.60
PF16576HlyD_D23 0.60

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 168 Family Scaffolds
COG0343Queuine/archaeosine tRNA-ribosyltransferaseTranslation, ribosomal structure and biogenesis [J] 0.60
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.60
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.60
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.60
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.60
COG1549Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domainsTranslation, ribosomal structure and biogenesis [J] 0.60
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.60
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.60
COG2340Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domainCell cycle control, cell division, chromosome partitioning [D] 0.60
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.60


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.93 %
All OrganismsrootAll Organisms41.07 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105617317All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860991Open in IMG/M
3300000891|JGI10214J12806_11732616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860812Open in IMG/M
3300001686|C688J18823_10688766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860650Open in IMG/M
3300004114|Ga0062593_100157596All Organisms → cellular organisms → Bacteria1735Open in IMG/M
3300004114|Ga0062593_100169479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601689Open in IMG/M
3300004114|Ga0062593_101844178Not Available666Open in IMG/M
3300004156|Ga0062589_100459788All Organisms → cellular organisms → Bacteria → Proteobacteria1057Open in IMG/M
3300004157|Ga0062590_100647023All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860940Open in IMG/M
3300004157|Ga0062590_101474103Not Available681Open in IMG/M
3300004463|Ga0063356_100407695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1752Open in IMG/M
3300004479|Ga0062595_102584707Not Available508Open in IMG/M
3300004480|Ga0062592_101192044Not Available711Open in IMG/M
3300005093|Ga0062594_100043465All Organisms → cellular organisms → Bacteria2221Open in IMG/M
3300005093|Ga0062594_100273024Not Available1259Open in IMG/M
3300005328|Ga0070676_10354824All Organisms → cellular organisms → Bacteria → Proteobacteria1009Open in IMG/M
3300005328|Ga0070676_10484515Not Available875Open in IMG/M
3300005330|Ga0070690_101158706Not Available615Open in IMG/M
3300005336|Ga0070680_101606395Not Available563Open in IMG/M
3300005337|Ga0070682_100455431All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860981Open in IMG/M
3300005338|Ga0068868_100610734Not Available967Open in IMG/M
3300005340|Ga0070689_100328536Not Available1279Open in IMG/M
3300005347|Ga0070668_100785567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860845Open in IMG/M
3300005354|Ga0070675_100072161All Organisms → cellular organisms → Bacteria → Proteobacteria2866Open in IMG/M
3300005438|Ga0070701_11202233Not Available538Open in IMG/M
3300005526|Ga0073909_10272760Not Available759Open in IMG/M
3300005529|Ga0070741_11347628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp. CPCC 100927595Open in IMG/M
3300005535|Ga0070684_101740061Not Available588Open in IMG/M
3300005539|Ga0068853_100373773All Organisms → cellular organisms → Bacteria → Proteobacteria1330Open in IMG/M
3300005543|Ga0070672_100057712All Organisms → cellular organisms → Bacteria3048Open in IMG/M
3300005548|Ga0070665_101969344Not Available590Open in IMG/M
3300005576|Ga0066708_10666764All Organisms → cellular organisms → Bacteria → Proteobacteria661Open in IMG/M
3300005618|Ga0068864_101810112Not Available616Open in IMG/M
3300005718|Ga0068866_10924466All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860615Open in IMG/M
3300005719|Ga0068861_100654805All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860971Open in IMG/M
3300005840|Ga0068870_10575989Not Available762Open in IMG/M
3300005842|Ga0068858_100193514Not Available1922Open in IMG/M
3300005842|Ga0068858_101929739Not Available584Open in IMG/M
3300006028|Ga0070717_10714872Not Available910Open in IMG/M
3300006038|Ga0075365_10419322All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860945Open in IMG/M
3300006041|Ga0075023_100377154Not Available607Open in IMG/M
3300006042|Ga0075368_10347632Not Available645Open in IMG/M
3300006050|Ga0075028_100789739Not Available578Open in IMG/M
3300006057|Ga0075026_100060181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1810Open in IMG/M
3300006172|Ga0075018_10461615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales656Open in IMG/M
3300006178|Ga0075367_10551697Not Available732Open in IMG/M
3300006237|Ga0097621_101595967Not Available620Open in IMG/M
3300006358|Ga0068871_102376934Not Available505Open in IMG/M
3300006606|Ga0074062_12644670Not Available561Open in IMG/M
3300006606|Ga0074062_12697903Not Available647Open in IMG/M
3300006794|Ga0066658_10392667All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860751Open in IMG/M
3300006797|Ga0066659_11801226Not Available518Open in IMG/M
3300006865|Ga0073934_10001190All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales65341Open in IMG/M
3300006871|Ga0075434_101789541Not Available621Open in IMG/M
3300006881|Ga0068865_101459960Not Available612Open in IMG/M
3300006903|Ga0075426_10681754Not Available770Open in IMG/M
3300006953|Ga0074063_13424425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860751Open in IMG/M
3300006954|Ga0079219_10470708All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860866Open in IMG/M
3300007788|Ga0099795_10437804Not Available600Open in IMG/M
3300009098|Ga0105245_10589171All Organisms → cellular organisms → Bacteria → Proteobacteria1137Open in IMG/M
3300009101|Ga0105247_10799806Not Available719Open in IMG/M
3300009148|Ga0105243_11657803Not Available667Open in IMG/M
3300009551|Ga0105238_10524350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601187Open in IMG/M
3300009553|Ga0105249_12925687Not Available548Open in IMG/M
3300009650|Ga0105857_1071635Not Available916Open in IMG/M
3300009789|Ga0126307_10692245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860822Open in IMG/M
3300010036|Ga0126305_10192263Not Available1290Open in IMG/M
3300010036|Ga0126305_10962893Not Available584Open in IMG/M
3300010040|Ga0126308_10583009Not Available761Open in IMG/M
3300010044|Ga0126310_10169113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601410Open in IMG/M
3300010045|Ga0126311_10267302Not Available1275Open in IMG/M
3300010159|Ga0099796_10355825Not Available632Open in IMG/M
3300010371|Ga0134125_12292404Not Available587Open in IMG/M
3300010400|Ga0134122_10529305All Organisms → cellular organisms → Bacteria → Proteobacteria1073Open in IMG/M
3300010403|Ga0134123_10438111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601211Open in IMG/M
3300011423|Ga0137436_1139505Not Available649Open in IMG/M
3300012200|Ga0137382_10480186Not Available881Open in IMG/M
3300012203|Ga0137399_10300705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601325Open in IMG/M
3300012208|Ga0137376_11265469Not Available628Open in IMG/M
3300012212|Ga0150985_103187493Not Available709Open in IMG/M
3300012212|Ga0150985_106114427Not Available1253Open in IMG/M
3300012212|Ga0150985_108478074Not Available529Open in IMG/M
3300012212|Ga0150985_109100123Not Available567Open in IMG/M
3300012212|Ga0150985_111295916Not Available716Open in IMG/M
3300012212|Ga0150985_112521056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601020Open in IMG/M
3300012212|Ga0150985_117800066Not Available649Open in IMG/M
3300012212|Ga0150985_119122116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860751Open in IMG/M
3300012349|Ga0137387_10320212All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601122Open in IMG/M
3300012469|Ga0150984_100760515Not Available579Open in IMG/M
3300012469|Ga0150984_108359545Not Available701Open in IMG/M
3300012469|Ga0150984_115209344Not Available505Open in IMG/M
3300012469|Ga0150984_118174234Not Available509Open in IMG/M
3300012898|Ga0157293_10013210All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.1395Open in IMG/M
3300012902|Ga0157291_10026415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601211Open in IMG/M
3300012911|Ga0157301_10265524All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria611Open in IMG/M
3300012913|Ga0157298_10284420Not Available578Open in IMG/M
3300012923|Ga0137359_10622698Not Available945Open in IMG/M
3300012929|Ga0137404_10007526All Organisms → cellular organisms → Bacteria7411Open in IMG/M
3300012930|Ga0137407_12067512Not Available544Open in IMG/M
3300012944|Ga0137410_10377176Not Available1139Open in IMG/M
3300012951|Ga0164300_10493241Not Available698Open in IMG/M
3300012960|Ga0164301_10449608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860916Open in IMG/M
3300012960|Ga0164301_10481094All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860891Open in IMG/M
3300012960|Ga0164301_11125156Not Available626Open in IMG/M
3300012961|Ga0164302_10491523Not Available864Open in IMG/M
3300012985|Ga0164308_11784838Not Available573Open in IMG/M
3300013296|Ga0157374_11813239Not Available635Open in IMG/M
3300013297|Ga0157378_10530528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601180Open in IMG/M
3300013308|Ga0157375_11219791Not Available883Open in IMG/M
3300014166|Ga0134079_10629611Not Available537Open in IMG/M
3300014326|Ga0157380_11078694Not Available841Open in IMG/M
3300014326|Ga0157380_11508716Not Available725Open in IMG/M
3300014968|Ga0157379_11410884Not Available675Open in IMG/M
3300014969|Ga0157376_10287209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601552Open in IMG/M
3300015201|Ga0173478_10374605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860673Open in IMG/M
3300015201|Ga0173478_10856353Not Available505Open in IMG/M
3300015245|Ga0137409_10097185All Organisms → cellular organisms → Bacteria → Proteobacteria2736Open in IMG/M
3300015373|Ga0132257_101781415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860791Open in IMG/M
3300017792|Ga0163161_11504376Not Available591Open in IMG/M
3300018060|Ga0187765_10283285Not Available988Open in IMG/M
3300018067|Ga0184611_1002402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae4334Open in IMG/M
3300018083|Ga0184628_10333894All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860796Open in IMG/M
3300018469|Ga0190270_10246287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601551Open in IMG/M
3300018476|Ga0190274_10032699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68603574Open in IMG/M
3300018476|Ga0190274_12315115Not Available634Open in IMG/M
3300018476|Ga0190274_13153204Not Available555Open in IMG/M
3300018482|Ga0066669_10993743Not Available757Open in IMG/M
3300019356|Ga0173481_10419705Not Available660Open in IMG/M
3300019356|Ga0173481_10734183Not Available538Open in IMG/M
3300019999|Ga0193718_1061119Not Available812Open in IMG/M
3300020084|Ga0194110_10896709Not Available528Open in IMG/M
3300020193|Ga0194131_10000517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC686065295Open in IMG/M
3300021082|Ga0210380_10033419All Organisms → cellular organisms → Bacteria → Proteobacteria2204Open in IMG/M
3300023066|Ga0247793_1091528Not Available526Open in IMG/M
3300025310|Ga0209172_10002840All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC686028809Open in IMG/M
3300025903|Ga0207680_10124109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601693Open in IMG/M
3300025903|Ga0207680_10697140All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300025918|Ga0207662_10174330All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium1381Open in IMG/M
3300025923|Ga0207681_10452919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1044Open in IMG/M
3300025925|Ga0207650_10456610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601064Open in IMG/M
3300025937|Ga0207669_10428427Not Available1043Open in IMG/M
3300025940|Ga0207691_11219796Not Available623Open in IMG/M
3300025949|Ga0207667_10668873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601043Open in IMG/M
3300025960|Ga0207651_11054523Not Available728Open in IMG/M
3300026023|Ga0207677_11438790Not Available635Open in IMG/M
3300026142|Ga0207698_10690627Not Available1015Open in IMG/M
3300027903|Ga0209488_10073102All Organisms → cellular organisms → Bacteria → Proteobacteria2543Open in IMG/M
3300027915|Ga0209069_10047388All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2018Open in IMG/M
3300028799|Ga0307284_10258045Not Available695Open in IMG/M
3300028885|Ga0307304_10288241Not Available723Open in IMG/M
3300031022|Ga0138301_1838698Not Available514Open in IMG/M
3300031170|Ga0307498_10028775Not Available1348Open in IMG/M
3300031231|Ga0170824_113979142Not Available748Open in IMG/M
3300031241|Ga0265325_10032863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2768Open in IMG/M
3300031241|Ga0265325_10113264All Organisms → cellular organisms → Bacteria → Proteobacteria1316Open in IMG/M
3300031241|Ga0265325_10132674Not Available1191Open in IMG/M
3300031446|Ga0170820_17845326Not Available767Open in IMG/M
3300031562|Ga0310886_10431599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860783Open in IMG/M
3300031716|Ga0310813_10313038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601328Open in IMG/M
3300031716|Ga0310813_12087160Not Available535Open in IMG/M
3300031740|Ga0307468_101998993Not Available555Open in IMG/M
3300031854|Ga0310904_10179489All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601258Open in IMG/M
3300031908|Ga0310900_10697639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860812Open in IMG/M
3300032013|Ga0310906_10327875All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860988Open in IMG/M
3300032157|Ga0315912_10293584Not Available1281Open in IMG/M
3300033433|Ga0326726_11282908Not Available713Open in IMG/M
3300034149|Ga0364929_0099909Not Available914Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.95%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere4.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.17%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.57%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.38%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.38%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.79%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.79%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.19%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.19%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.19%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.19%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.19%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.19%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.19%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.19%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.60%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.60%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.60%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.60%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.60%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.60%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.60%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.60%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009650Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020193Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120mEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10561731713300000364SoilMNTRMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPVLRRRTRD
JGI10214J12806_1173261613300000891SoilMTNRTIVFFAVLTALWLFGLIGQFHSGEAAMRYLALSMAILAVGVWRWQPRPALR
C688J18823_1068876613300001686SoilMSTRMIVLLAFFAALWIFGLIGQFHSTEAGMRYLALSMAILAVGVWRWQPRPALRRRYRDRSRPPE*
Ga0062593_10015759613300004114SoilMTNRTIVFFAVLTALWLFGLIGQFHSGEAAMRYLALSMAILAVGVWRWQPRPALRRRHRDRRPPDQSGPAL*
Ga0062593_10016947933300004114SoilMSARMIALLAGLTAFWIFGLLGQLHSGEATMRYLALSLALIAIGVWRWRPRPALRRRFRDRRRPPE*
Ga0062593_10184417813300004114SoilMSTRMMVMTAFLAALWLFGLVGQFHSAEAVMRYLALSTAILAVSVWRWQPRPALRQRTRDQRPPRSE*
Ga0062589_10045978833300004156SoilMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0062590_10064702323300004157SoilMNARMVVLLAIFSALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWRWQPRPALRGRSRERRPPAE*
Ga0062590_10147410323300004157SoilMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPALRRRSHDGRPPAE*
Ga0063356_10040769543300004463Arabidopsis Thaliana RhizosphereMRVRTVALLAVMSALWIYGLLGQLHSAEAAMRYLALSAAIVAVGVWRWKPRPALRRRLRDKRRPPPE*
Ga0062595_10258470713300004479SoilMSMRMIVLLAFFTALWLFGLIGQFHSGDAAMRYLALSMVILAVGVWRWQPRPAMRGRSRNRGYPRDEL*
Ga0062592_10119204413300004480SoilMSMRMIVLLAFFTALWLFGLIGQFHSGDAAMRYLALSMVILAVGVWRWQPRPAMRRRSRDRGYPRDEF*
Ga0062594_10004346523300005093SoilMTNRTIVFFAVLTALWLFGLIGQFHSGEAAMRYLALSMAILAVGVWRWQPRPALRRRHRDRRPPDRSGPAL*
Ga0062594_10027302413300005093SoilAFLAALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWRWQPRAALRQRYRDRRPPAE*
Ga0070676_1035482433300005328Miscanthus RhizosphereMSVRMVVMLAFLAALWLFGLIGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRY
Ga0070676_1048451523300005328Miscanthus RhizosphereMSPRMIVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAIGVWRWQPRPALRRRYRDRPRPPE*
Ga0070690_10115870623300005330Switchgrass RhizosphereMIVLLAFFTALWLFGLIGQFHSGEAAMRYLALSMVILAVGVWRWQPRPAMRGRSRNRGYPRDEL*
Ga0070680_10160639513300005336Corn RhizosphereMTNRTIVFFAVLTALWLFGLIGQFHSGEAAMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0070682_10045543123300005337Corn RhizosphereMSTRMMVMTAFLAALWLFGLVGQFHSAEAVMRYLALSTGMLAFSVWRWQPRPARQRTRDQHPPRE*
Ga0068868_10061073413300005338Miscanthus RhizosphereMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPVWRWQTRPALRRRSHDGRPPAE*
Ga0070689_10032853613300005340Switchgrass RhizosphereGFLSALWIIGLIGQLHSAESAMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0070668_10078556713300005347Switchgrass RhizosphereMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQGPPE*
Ga0070675_10007216133300005354Miscanthus RhizosphereMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRRRPPE*
Ga0070701_1120223323300005438Corn, Switchgrass And Miscanthus RhizosphereAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQGPPE*
Ga0073909_1027276023300005526Surface SoilMNIRVIVLSAFLAALWTFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYRDRQHPRE*
Ga0070741_1025723533300005529Surface SoilMSVRTIVLSAFLAALWLFGLIGQVYSVEAAMRYLVLSMALVAVALWRMEPRPALLRRRTNDQRPPE*
Ga0070741_1134762813300005529Surface SoilIAVLSAFWLGGLIGQLHSGEATMRYLALSTAILAFGVWRWQPKPAMRRRYRDRRPPQD*
Ga0070684_10174006113300005535Corn RhizosphereMSTRMIVLLAFLAALWIFGLVGQFHSAETGMRYLALSLAIVAVGVWRWQPRPALRRRYRDRSRPPGSGPPG*
Ga0068853_10037377313300005539Corn RhizosphereMRVRIVVLVAVLSAFWLGGLIGQLHSGEAAMRYLALSTAILAFGVWRWQPKPAMRRRYRDRRPPQD*
Ga0070672_10005771223300005543Miscanthus RhizosphereMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQNRPALRRRSHDGRPPAE*
Ga0070665_10196934413300005548Switchgrass RhizosphereMSSRMIVLLAFLSALWILGLVGQFHSAEAAMRYLALSMVILAIGAWRWQPRPALRRRYRDRQRPPE*
Ga0066708_1066676423300005576SoilMSIRMIVLLAFLAALWIFGLIGQFHSAEAGMRYLALSMVILAVGIWRWQPRPALRRRFRDRRRPPG*
Ga0068864_10181011213300005618Switchgrass RhizosphereMSPRMIVLLAFLAALWIFGLVGKFHSAEAGMRYLALSMVILAIGVWRWQPRPALRRRYRDRPRPPE*
Ga0068866_1092446613300005718Miscanthus RhizosphereMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPALRRR
Ga0068861_10065480533300005719Switchgrass RhizosphereMNVRMIVLLAIFSALWLLGLIGQFYSGEAAMRYLVLSMAILAVGVWRWQTRPALRRRSHDGRPPAE*
Ga0068870_1057598923300005840Miscanthus RhizosphereMNTRMIVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQGPPE*
Ga0068858_10019351453300005842Switchgrass RhizosphereMNIRMVVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0068858_10192973923300005842Switchgrass RhizosphereMNIRVIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYRDRQHPRE*
Ga0070717_1071487223300006028Corn, Switchgrass And Miscanthus RhizosphereMNTRMIVLLGFLAALWIFGLIGQLHSAETGMRYLALSMAILAVGVWRWQPRPVLRRRNRDRRRPPE*
Ga0075365_1041932223300006038Populus EndosphereMNARMVVLLAIFSALWLFGLIGQVYSGEATMRYLALSMAILAVGVWRWQPRPALRGRSRERRPPAE*
Ga0075023_10037715423300006041WatershedsMSARMVVLLAFLAALWIFGLVGQLHSAEAAMRYLALSTAVLAVGVWRWQPRPELRRRLRDRRRPPE*
Ga0075368_1034763223300006042Populus EndosphereMSPRMIVLLAFLAALWIFGLIGQFHSAEAGMRYLALSMVILAIGVWRWQPRPALRRRFRDRRRPPQ*
Ga0075028_10078973923300006050WatershedsMNTRMIVLLGFLSALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRHRDRRRPPR*
Ga0075026_10006018123300006057WatershedsMSARMVVLLAFLAALWIFGLVGQLHSAEAAMRYLALSTAVLAVGVWRWQPRPELRRRSRDRRRPPE*
Ga0075018_1046161513300006172WatershedsCEMSARMVVLLAFLAALWIFGLVGQLHSAEAAMRYLALSTAVLAVGVWRWQPRPELRRRLRDRRRPPE*
Ga0075367_1055169733300006178Populus EndosphereMSARMIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSLAIVAVGVWRWQPRPALRRRYRD
Ga0097621_10159596713300006237Miscanthus RhizosphereMSTRMIVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAIGVWRWQPRPALRRRYRDRPRPPE*
Ga0068871_10237693423300006358Miscanthus RhizosphereMSPRMVVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAIGVWRWQPRPALRRRYRDRPRPPE*
Ga0074062_1264467023300006606SoilLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRYRDRRHPPE*
Ga0074062_1269790323300006606SoilMNVQMIVLLAILSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPALRRRSHDGRPPAE*
Ga0066658_1039266713300006794SoilMNIRVIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRYRDRRHPPE*
Ga0066659_1180122623300006797SoilMNTRMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPVLRRRTRDRRRPPG*
Ga0073934_10001190343300006865Hot Spring SedimentMRLVMIALVALLTALWVQGLIGQLHSAEAAMRYLALSLAVVAVGVWRWRPGPPRRRRFRDRRRPPPP*
Ga0075434_10178954123300006871Populus RhizosphereMRMRTVALLAVMSALWIYGLLGQIHSAEAGMRYLALSAAIVAVGVLRWKPRPPLRRRWRDRRRPPPE*
Ga0068865_10145996013300006881Miscanthus RhizosphereMSARMVVMLAFLAALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWRWQPRAALRQRYRDRRPPAE*
Ga0075426_1068175443300006903Populus RhizosphereMNTRMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRTRDRRRPPG*
Ga0074063_1342442523300006953SoilMNVQMIVLLAIFSALWLFGLIGQAYSGEAAMRYLALSMAILAVGVWRWHTRPALRRRSHDGRPPAE*
Ga0079219_1047070823300006954Agricultural SoilMNIRVIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRSRDRRRPPGQT*
Ga0099795_1043780423300007788Vadose Zone SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYHDRRRPPE*
Ga0105245_1058917133300009098Miscanthus RhizosphereMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRR
Ga0105247_1079980623300009101Switchgrass RhizosphereMVVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0105243_1165780313300009148Miscanthus RhizosphereMLAFLAALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWRWQPRPALRRRHRDRRPPDQSGPAL*
Ga0105238_1052435023300009551Corn RhizosphereMNIRVIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALQRRYRDRRHPRE*
Ga0105249_1089227543300009553Switchgrass RhizosphereMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPAFGG
Ga0105249_1292568713300009553Switchgrass RhizosphereMIVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQGPPE*
Ga0105857_107163523300009650Permafrost SoilMNVRMIVLLGFFSALWIFGLLGQLHSAESVMRYLALSMVILAIGVWRWQPRPALRRRYRDRRPPPG*
Ga0126307_1069224523300009789Serpentine SoilMVVLLALFSALWLFGLLGQVYSGEAAMRYLALSMAILAVAVWRWQPRPVLRRRSHDARPPVE*
Ga0126305_1019226323300010036Serpentine SoilMRMIVLLAFFTALWLFGLIGQFHSGEAAMRYLALSMVILAVGVWRWQPRPAMRRRSRDRGYPRDEL*
Ga0126305_1096289313300010036Serpentine SoilMVVLLALFSALWLFGLLGQVYSGEAAMRYLALSMAILAVGVWRWQPRPALRRSRDRRPPA
Ga0126308_1058300923300010040Serpentine SoilMVVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRHTRDRQRPPE*
Ga0126310_1016911323300010044Serpentine SoilMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0126311_1026730243300010045Serpentine SoilFVENWSDAMNIRMVVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRHTRDRQRPPE*
Ga0099796_1035582513300010159Vadose Zone SoilMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRY
Ga0134125_1229240413300010371Terrestrial SoilMRVRMVVLVAVLSAFWLGGLIGQLHSGEAAMRYLALSTAILAFGVWRWQPKPAMRRRYRDRRPPQD*
Ga0134122_1052930513300010400Terrestrial SoilMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0134123_1043811123300010403Terrestrial SoilMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQHPRE*
Ga0137436_113950523300011423SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0137382_1048018623300012200Vadose Zone SoilMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRTRDHRRPPG*
Ga0137399_1030070543300012203Vadose Zone SoilMNTRMIILLAFLAALWIFGLVGQLHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRRRPPGQP*
Ga0137376_1126546913300012208Vadose Zone SoilMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRTRDHRRPPG
Ga0150985_10318749313300012212Avena Fatua RhizosphereMMVMTAFLAALWLFGLAGQFHSAEAVMRYLALSTAILAVSVWRWQPRPALRQRTRNQRPPRSE*
Ga0150985_10611442713300012212Avena Fatua RhizosphereMMVMSARMVVLLAFLAALWVFGLIGQSYSGEATMRYLALSLALVAVAVWRLKPRPAALKQRSADRKLPRND*
Ga0150985_10847807413300012212Avena Fatua RhizosphereMNARTVVLLAVFSALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWRWQPRPALRRSRDRRPPAE*
Ga0150985_10910012323300012212Avena Fatua RhizosphereMVVILAFLAALWLFGLIGQFHSAEAAMRYLALSMAILAVGVWRWQPRPALRRRYRDRQPPRE*
Ga0150985_11129591623300012212Avena Fatua RhizosphereMILLLAFLTALWIFGLVGQFHSAEAGMRYLALSMVIVAIGVWRCQPRPALRRRYRDRQRPPQ*
Ga0150985_11252105623300012212Avena Fatua RhizosphereMSVRMVVMLAFFAALWLFGLIGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRYRDRQPPQK*
Ga0150985_11780006613300012212Avena Fatua RhizosphereMNVRMIILLGFFSALWIFGLLGQLHSAESAMRYLALSMVILAIGVWRWQQRPALRRRYRDRGRPPG*
Ga0150985_11912211613300012212Avena Fatua RhizosphereMIVLLAFFAALWIFGLIGQFHSTEAGMRYLALSMAILAVGVWRWQPRPALRRRYHDRSRPPE*
Ga0137387_1032021233300012349Vadose Zone SoilMNTRMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRYRDRRRPPGQT*
Ga0150984_10076051523300012469Avena Fatua RhizosphereMNARMVVLLAIFSALWLFGLIGQAYSGEAAMRYLAFSMAILAVGVWRWQPRPALRGRSRERRPPAE*
Ga0150984_10835954523300012469Avena Fatua RhizosphereMNVRMIILLGFFSALWIFGLLGQLHSAESAMRYLALSMVILAIGVWRWQPRPALRRRYRDRGRPPG*
Ga0150984_11520934423300012469Avena Fatua RhizosphereVVLLAFLAALWIFGLVGQLHSAETAMRYLALSLAILAVGVWRWQPRPALRRRYRDRHPPG
Ga0150984_11817423423300012469Avena Fatua RhizosphereMRMVVMLAFFAALWLFGLIGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRYRDRQPPQK*
Ga0157293_1001321033300012898SoilMNARMVVLLAIFSALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWRWQPRPALRRSRDRRPP
Ga0157291_1002641523300012902SoilMRMIVLLALFTALWLFGLIGQFHSGDAAMRYLALSMVILAVGVWRWQPRPAMRRRSRDRGYPRDEL*
Ga0157301_1026552413300012911SoilMNARMVVLLAIFSALWLFELIGQVYSGEAAMRYLALSMAILSVGVWRWQPRPALRGRSRERRPPAE*
Ga0157298_1028442013300012913SoilMVVILAFLAALWLFGLIGQFHSAEAAMRYLALSMAILAVGVWRLQPRPALRRRHRDRRPPDQSGPAL*
Ga0137359_1062269823300012923Vadose Zone SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYRDRRRPPGQS*
Ga0137404_1000752673300012929Vadose Zone SoilMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPQPALRRRYRDRRRPPE*
Ga0137407_1206751213300012930Vadose Zone SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPQPALRRRYRDRRRPPE*
Ga0137410_1037717623300012944Vadose Zone SoilMIILLAFLAALWIFGLVGQLHSAEAGMRYLALSLAIVAVGVWRWQPRSALRRRYRDRRRPPGQS*
Ga0164300_1049324123300012951SoilMNIRVIVLSAFLAALWIFGLVGQFHSAEVGMRYLALSMVILAVGVWRWQPRPALRRRYRDRRHPRE*
Ga0164301_1044960813300012960SoilMMVMTAFLAALWLFGLAGQFHSAEAVMRYLALSTAILAVSVWRWQPRPALRQRTRDQRPPRSE*
Ga0164301_1048109413300012960SoilMNIRVIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYRDRQHPRQ*
Ga0164301_1112515623300012960SoilMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYRDRRHPPE*
Ga0164302_1049152313300012961SoilRSSEIGAWPMSARTVVLLAVFSALWLFGLFGQVYSVEATMRYLALSMAILAVGVWRWQPRPALRRRSHDRRPPAE*
Ga0164308_1178483823300012985SoilAVFSALWLFGLIGQVYSGEATMRYLALSMAILAVGVWRWQTRPALRRRSHDGRPPAE*
Ga0157374_1181323913300013296Miscanthus RhizosphereMMVMTAFLAALWLFGLVGQFHSAEAVMRYLALSTAILAVSVWRWQPRPARQRTRDQHPPRE*
Ga0157378_1053052823300013297Miscanthus RhizosphereMNIRMVVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRYRDRQHPRE*
Ga0157375_1121979123300013308Miscanthus RhizosphereMRMIVLLAFFTALWLFGLIGQFHSGEAAMRYLALSMVILAVGVWRWQPRPAMRGRSRDRGYPRDEL*
Ga0134079_1062961113300014166Grasslands SoilSATCSLDDYSSAIGVRPMSARMVILLAFLTALWVFGLVGQLHSAEAGMRYLVLSMAILAVAVWRWQPRPALRRRYRDDRRPPQ*
Ga0157380_1107869423300014326Switchgrass RhizosphereMRMIVLLAFFTALWLFGLIGQFHSGEAAMRYLALSMVILAVGVWRWQPRPAMRGRSRD
Ga0157380_1150871623300014326Switchgrass RhizosphereMNIRLVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0157379_1141088423300014968Switchgrass RhizosphereMIVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE*
Ga0157376_1028720923300014969Miscanthus RhizosphereMMVMTAFLAALWLFGLVGQFHSAEAVMRYLALSTAILAVSVWRWQPRPALRQRTPDQRPPRSE*
Ga0173478_1037460513300015201SoilMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPALRRRSHDGR
Ga0173478_1085635323300015201SoilMRMIVLLAFFTALWLFGLIGQFHSGDAAMRYLALSMVILAVGVWRWQPRPAMRGRSRNRGYPRDEL*
Ga0137409_1009718553300015245Vadose Zone SoilMIILLAFLVALWIFGLVGQFHSAESGMRYLALSLAIVAVGVWRWQPRSALRRRYRDRRRPPGQS*
Ga0132257_10178141523300015373Arabidopsis RhizosphereMNIRVIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYR
Ga0163161_1150437613300017792Switchgrass RhizosphereNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPALRRRSHDGRPPAE
Ga0187765_1028328533300018060Tropical PeatlandMMVLTAVLAAFWLQGLVSQLYSAEAAMRYLVLSLALVAVGVWRWRPSPVLRRRIRDRRRPPPD
Ga0184611_100240223300018067Groundwater SedimentMNARMIGLLAIFSALWLFGLIGQANSGEAAMRYLALSMAILAVGVWRWQTRPALRRRSHDGRPPAE
Ga0184628_1033389413300018083Groundwater SedimentMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAIVAVGVWRWQTRPALR
Ga0190270_1024628743300018469SoilMSMRMIVLLAFFTALWLFGLIGQFHSGEAAMRYLALSMVILAVGVWRWQPRPAMRRRSRDRGYPRDEL
Ga0190274_1003269943300018476SoilMSMRMIVLLAFFTALWLFGLIGQFHSGDAAMRYLALSMVILAVGVWRWQPRPAMRGRSRDRGYPRDEL
Ga0190274_1231511523300018476SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYRDRRRPPG
Ga0190274_1315320423300018476SoilMNARMVVLLAIFSALWLFELIGQVYSGEAAMRYLALSMAILSVGVWRWQPRPALRGRSRERR
Ga0066669_1099374323300018482Grasslands SoilMNTRMIILLAFLAALWIFGLIGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRTRDRRHPPG
Ga0173481_1041970513300019356SoilMTNRTIVFFAVLTALWLFGLIGQFHSGEAAMRYLALSMAILAVGVWRWQPRPALRRRHRDRRPPDQSGPAL
Ga0173481_1073418313300019356SoilMNARMVVLLAIFSALWLFELIGQVYSGEAAMRYLALSMAILSVGVWRWQPRPALRGR
Ga0193718_106111933300019999SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAIGVWRWQPRPALRRRTRDRQRPPE
Ga0194110_1089670913300020084Freshwater LakeMHLGTVALLALLAALWLYGLVGQLHSGEAAMRYLTLSLAIVAVAVWRWQPRAA
Ga0194131_1000051773300020193Freshwater LakeMHLGTVALLALLAALWLYGLVGQLHSGEAAMRYLTLSLAIVAVAVWRWQPRAARRRFRDRRRPPPD
Ga0210380_1003341943300021082Groundwater SedimentMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQTRPALRRRSHDGRPPAE
Ga0247793_109152823300023066SoilMRMIVLLAFFTALWLFGLIGQFHSGDAAMRYLALSMVILAVGVWRWQPRPAMRRRSRDRGYPRDEL
Ga0209172_10002840123300025310Hot Spring SedimentMRLVMIALVALLTALWVQGLIGQLHSAEAAMRYLALSLAVVAVGVWRWRPGPPRRRRFRDRRRPPPP
Ga0207680_1012410923300025903Switchgrass RhizosphereMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE
Ga0207680_1069714023300025903Switchgrass RhizosphereMTNRTIVFFAVLTALWLFGLIGQFHSGEAAMRYLALSMAILAVGVWRWQPRPALRRRHR
Ga0207662_1017433043300025918Switchgrass RhizosphereTALWLFGLIGQFHSGEAAMRYLSLSMAILAVGVWRWQPRPALRRRHRDRRPPDQSGPAL
Ga0207681_1045291913300025923Switchgrass RhizosphereLWLFGLIGQFHSGEAAMRYLALSMAILAVGVWRWQPRPALRRRHRDRRPPDQSGPAL
Ga0207650_1045661023300025925Switchgrass RhizosphereMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQRPPE
Ga0207669_1042842713300025937Miscanthus RhizosphereMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE
Ga0207691_1121979623300025940Miscanthus RhizosphereMNVRMIVLLAIFSALWLFGLIGQSYSGEAAMRYLVLSMAILAVGVWRWQNRPALRRRSHDGRPPAE
Ga0207667_1066887333300025949Corn RhizosphereMRVRMVVLVAVLSAFWLGGLIGQLHSGEAAMRYLALSTAILAFGVWRWQPKPALRRRYRDRRPPQD
Ga0207651_1105452323300025960Switchgrass RhizosphereMSTRMMVMTAFLAALWLFGLAGQFHSAEAVMRYLTLSTAILAVSVWRWQPRPALRQRTRDQRPPRSE
Ga0207677_1143879023300026023Miscanthus RhizosphereMNIRMVVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE
Ga0207698_1069062723300026142Corn RhizosphereMNIRVIVLSAFLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRQRPPE
Ga0209488_1007310243300027903Vadose Zone SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYHDRRRPPE
Ga0209069_1004738823300027915WatershedsMSARMVVLLAFLAALWIFGLVGQLHSAEAAMRYLALSTAVLAVGVWRWQPRPELRRRLRDRRRPPE
Ga0307284_1025804523300028799SoilMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRHRTRDRRRPPG
Ga0307304_1028824123300028885SoilMNTRMIILLAFLAALWIFGLIGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQRPPG
Ga0138301_183869813300031022SoilDSMSVRMIVLLGFFSALWIFGLLGQLHSAESAMRYLALSMAILAVGVWRWQPRPALRRRYRDRRRPPGQN
Ga0307498_1002877523300031170SoilMSMRMIVLLAFFTALWLFGLIGQFHSGEAAMRYLALSMVILAVGVWRWQPRPAMRGRSRDRGYPRDEL
Ga0170824_11397914223300031231Forest SoilMSTRMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRTRDRRRPPG
Ga0265325_1003286353300031241RhizosphereMRVKMVALLAVMSALWIYGLLGQFYSGEALMRYLALSMALVAIGAWRWQPRKLRVRSRDRRKPFD
Ga0265325_1011326423300031241RhizosphereMNTRTVVLFGFFAALWIFGLVGQLHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRFRDRQRPPE
Ga0265325_1013267433300031241RhizosphereMSVRMVVMVAVLSALWLVGLVGQFHSGEAAMRYLALSTAILAFGVWRWQPAPALRRRLRDRKRPRD
Ga0170820_1784532623300031446Forest SoilMNTRMIILLAFLAALWIFGLVGQFHSAESGMRYLALSMVILAVGVWRWQPRPALRRRTRDRRRPPG
Ga0310886_1043159913300031562SoilMNARMVVLLAIFSALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWRWQPRPALRGRSRERRPPAE
Ga0310813_1031303813300031716SoilMNIRMIVLLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRYRDRRRPPE
Ga0310813_1208716013300031716SoilSDAMNVRMIVLLGFLAALWIFGLVGQFHTAEAGMRYLTLSMVILAIGVWRWQPRPALRRRYRDRRGPPE
Ga0307468_10199899313300031740Hardwood Forest SoilFLAALWIFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRTRDRRRPPE
Ga0310904_1017948933300031854SoilMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPALRRRT
Ga0310900_1069763913300031908SoilMNIRMVVLLAFLAALWLFGLVGQFHSAEAGMRYLALSMAILAVGVWRWQPRPAL
Ga0310906_1032787523300032013SoilMNARMVVLLAIFSALWLFGLIGQVYSGEAAMRYLALSMAILAVGVWHWQPRPALRSRSRERRPPAE
Ga0315912_1029358413300032157SoilMSVRMIVLVAFLSALWLYGLAGQFHTAESGMRYLALSMAILAFGVWRWQPKPALRRRIRDRRPPQD
Ga0326726_1128290813300033433Peat SoilMSTRMIVLLAFLSVFWIVGLVGQFYSAEATMRYLAFSLALVAVMVWRLPARAALRRRWRDRRRPPQ
Ga0364929_0099909_258_4583300034149SedimentMNTRMIILLAFLAALWIFGLVGQFHSAEAGMRYLALSMVILAVGVWRWQPRPALRRRTRDRQRPPE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.