Metagenome / Metatranscriptome Family F037370

Basic Information
Family ID	F037370
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	36 residues
Representative Sequence	MWEVLRWFAVFVIALLLIVAGLFWLMGRPLPIPQF
Number of Associated Samples	142
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	129
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.691 % of family members)
Environment Ontology (ENVO)	Unclassified (23.810 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.524 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.68% β-sheet: 0.00% Coil/Unstructured: 60.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF01406	tRNA-synt_1e	58.33
PF10027	DUF2269	11.90
PF07690	MFS_1	4.17
PF05977	MFS_3	3.57
PF02423	OCD_Mu_crystall	2.38
PF07676	PD40	1.79
PF09190	DALR_2	1.79
PF08486	SpoIID	1.19
PF01642	MM_CoA_mutase	0.60
PF13360	PQQ_2	0.60
PF12534	Pannexin_like	0.60
PF14306	PUA_2	0.60
PF04127	DFP	0.60
PF02739	5_3_exonuc_N	0.60
PF08402	TOBE_2	0.60
PF00528	BPD_transp_1	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	60.12
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	58.33
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	58.33
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	3.57
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	2.38
COG2385	Peptidoglycan hydrolase (amidase) enhancer domain SpoIID	Cell wall/membrane/envelope biogenesis [M]	1.19
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.60
COG0452	Phosphopantothenoylcysteine synthetase/decarboxylase CoaBC	Coenzyme transport and metabolism [H]	0.60
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.60

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.29%
Host-Associated	Host-Associated	10.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	22.62%
Plants	Host-Associated → Plants	10.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.10%
Sediment	Environmental → Aquatic → Sediment	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.76%
Freshwater	Environmental → Aquatic → Freshwater	4.17%
Marine	Environmental → Aquatic → Marine	4.17%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.79%
Peat	Environmental → Terrestrial → Peat	1.19%
Floodplain	Environmental → Terrestrial → Floodplain	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	8.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.57%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Lake	Environmental → Aquatic → Freshwater → Lake	1.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.19%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.19%
Sediment	Environmental → Aquatic → Marine → Sediment	0.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.17%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.57%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.19%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.19%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.19%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.60%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.60%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.36%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	3.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.98%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.38%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.79%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.19%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.19%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.19%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.19%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.19%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.19%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.60%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.60%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.60%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.60%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.60%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.60%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.60%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.60%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300007822	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-8-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025001	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 3 (SPAdes)	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026008	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026196	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031256	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032061	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00639030	2088090008	Soil	MESETMWDVLRWFAVFVIAILLIVAGLFWIMGRQLPFPNF
P3_DRAFT_00081850	2088090008	Soil	MWDVLRWFAVFAIAILVIVAGLFLIMGRQLPIPNF
Perma_A_C_04258830	2124908032	Soil	MWDVLRWFAVFVAAILVMVAGLYLVLGKPLPFPHLF
P3_CLC_02884540	2124908041	Soil	MESETMWDVLRWFAVFVIAILLIVAGLFWIMGRQLPIPNF
A5_c1_01208550	2124908044	Soil	MWDVLRWFAVFVAAIMVMVAGLYLVLGRPLPIPHLF
ICCgaii200_08477472	2228664021	Soil	MWDVVRWFAVFVIAVFVIVIGLFWILDKPFPWPQLF
ICChiseqgaiiDRAFT_08030192	3300000033	Soil	MEVLRWFAVFVIAILLMVAGLFWLMGRPLPIPQF*
AL16A1W_101064982	3300000887	Permafrost	MWDVLRWFAVFVIAVLVLVAGVYLVLGKPLPIPSLF*
JGI10216J12902_1096883884	3300000956	Soil	MAWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPSF*
A21PFW6_13358932	3300001333	Permafrost	FYALIESAEMWDVLRWFAVFVIAVLVLVAGVYLVLGKPLPIPSLF*
A2065W1_101696644	3300001537	Permafrost	MEVLRWLAFFVLAILLIVAGLFWLMGRPLPFPSF*
C687J26616_101201022	3300002120	Soil	MWEVLKWFGLFVLAMLTIVAGLFWLMGRPITIPNLF*
C687J26616_101255082	3300002120	Soil	MWDVLRWFSVFVIAVLVMVAGLYWILGKPLPIPSLF*
C687J26631_100611122	3300002124	Soil	MWDVLRWFAVFIAAVLVLVFGLYLILGKPLPLPQIF*
soilL1_100170514	3300003267	Sugarcane Root And Bulk Soil	VEEGTVWEVLKWFAVFVIALLLIVAGLFWLMGRPLPFPQF*
Ga0055440_100202842	3300004020	Natural And Restored Wetlands	MESETMWDVVRWFAVFVIAILVIVAGLFWIMGRSLPIPNF*
Ga0063356_1016128833	3300004463	Arabidopsis Thaliana Rhizosphere	MEPPMWDVLRWFAVFVIAVLLIVAGIFWLFGRDLPIPQF*
Ga0070706_1000286021	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LGSRAMWEVLRWMIVFVLALLLIVAAIYLVTGRALPIPQF*
Ga0070730_100273742	3300005537	Surface Soil	MWEVLRWMIVFVLAVLLIVAAIYLVLGQPLPIPQF*
Ga0066661_101107623	3300005554	Soil	MWEVLRWMIVFVLALLLIVAAIYLVTGRALPIPQF*
Ga0066707_102333822	3300005556	Soil	MWDVLRWFSVFVIAILLIVAGLFWIMGRPLPIPQF*
Ga0066707_107726842	3300005556	Soil	MWEVLRWMIVFVLALLLIVTAIYLVTGRPLPIPQF*
Ga0066699_100058886	3300005561	Soil	MWEVLRWMIVFVLALLLIVAAIYLVTGRTLPIPQF*
Ga0066708_102790711	3300005576	Soil	MWEVLRWMIVFVLALLLIVAAIYLVTGRPLPVPQF*
Ga0068854_1003437823	3300005578	Corn Rhizosphere	MWDVVRWFAVFVIAIIVIVAGLYWILDKPLPIPQF*
Ga0068859_1027140042	3300005617	Switchgrass Rhizosphere	VWEVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0074470_1001022123	3300005836	Sediment (Intertidal)	MWDVVRWFAVFVIAILVIVAGLFWIMGRSLPIPNF*
Ga0075288_10022804	3300005874	Rice Paddy Soil	MWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPNF*
Ga0075293_10196572	3300005875	Rice Paddy Soil	MWDVLRWFAVFVAAILVMVAGLYLLLGKPLPIPHLF*
Ga0075284_10003324	3300005885	Rice Paddy Soil	MWEVLRWMIVFVLALLLIVAGIYLVLGEPLPIPQF*
Ga0081539_100393394	3300005985	Tabebuia Heterophylla Rhizosphere	MWEVLKWFAVFVIALLLIVAGLFWLMGRELPIPQF*
Ga0066696_109669771	3300006032	Soil	MWEVLRWMIVFVLALLLIVAAIYLVTGRPLPIPQF*
Ga0070716_1008932291	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPSF*
Ga0066658_100705802	3300006794	Soil	MWEVLRWMIVFVLALLLIVVAIYLATGRPLPIPSF*
Ga0066660_101984062	3300006800	Soil	MPYLGAEPMWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPQF*
Ga0075428_1004483602	3300006844	Populus Rhizosphere	MWEVLKWMAVFVIALLLIVAGLFWLMGRDLPIPQF*
Ga0075433_113253292	3300006852	Populus Rhizosphere	MWDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF*
Ga0075425_1000139548	3300006854	Populus Rhizosphere	VWDVIRWFAVFVIAVFVLIAGLYLILGKPLPIPHLF*
Ga0075425_1008821172	3300006854	Populus Rhizosphere	MWEVLRWMIVFVLALLLIVAAIYLVTGRSLPIPSF*
Ga0079215_110600872	3300006894	Agricultural Soil	MWEVLRWFAVFVLALLLMVAGLFWLMGRPLPIPDF*
Ga0075436_1004122762	3300006914	Populus Rhizosphere	MWEVLRWMIVFVLALLLIVAAIYIVDGRSLPIPSF*
Ga0097620_1001414943	3300006931	Switchgrass Rhizosphere	MWDVLRWFAVFVIAVLVLIAGVYLVLGKPLPIPSLF*
Ga0079218_134092832	3300007004	Agricultural Soil	MWEVLKWMIVFVLSLLLIVAGLFWLMGRPLPIPEF*
Ga0102953_10216393	3300007775	Soil	MWEVLRWFAVFVLALLLIVAGLFWLMGRPLPIPNF*
Ga0102953_11234641	3300007775	Soil	MWEVLRWMIVFIAALLLIVAGIYWVLGRPLPIPSF*
Ga0104325_1160512	3300007822	Soil	MWDVLRWFAVFVTAILVIVAGLYLVLGRPLPFPHLF*
Ga0066710_1038505582	3300009012	Grasslands Soil	MWDVLRWFAVFVIAVLVLVAGIYLVLGKPLPIPSLF
Ga0105095_102853902	3300009053	Freshwater Sediment	MWEVLRWFAVFVLALLLMVAGLFWLMGRPLPIPEF*
Ga0066709_1016292342	3300009137	Grasslands Soil	MWEVVRWMIVFVLALLLIVAAIYLVTGQPLPIPQF*
Ga0114129_131721792	3300009147	Populus Rhizosphere	VWEVLKWFAVFVIALLLIVAGLFWLMGRDLPIPTF*
Ga0118657_127905951	3300009506	Mangrove Sediment	VWEVLKWFLVFVIALLLLVAGLFWLMGRPLPIPNF*
Ga0126308_109345252	3300010040	Serpentine Soil	MGWEVLRWFAMFVIALLLIVAGLFVLMGQPLPIPQF*
Ga0136847_130915621	3300010391	Freshwater Sediment	MWDVLRWFAVFAAAVLVMVAGLYLILGRPLPIPHLF*
Ga0138514_1000138122	3300011003	Soil	MWDVLRWFAVFVIAVFVIVIGLFWILDKPFPWPQLF*
Ga0138514_1000152982	3300011003	Soil	MWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPQF*
Ga0137458_10515502	3300011436	Soil	MWEVLKWMAVFVAAILVMVAGLYIILGKPLPIPQLF*
Ga0120148_10001102	3300011999	Permafrost	MWDVLRWFFVFVLAVLILVAGLYWILGKSLPIPHLF*
Ga0137364_106927532	3300012198	Vadose Zone Soil	MWEVLRWMIVFVFALLLIVAAIYLVTGRPLPIPQF*
Ga0137383_113018981	3300012199	Vadose Zone Soil	MWEVVRWMIVFVLALLLIVAAIYLVTGQPLSIPQF*
Ga0137374_106031071	3300012204	Vadose Zone Soil	MAWEVLRWFLVFVLALLLIVAGLFWLMGRPLPFPNF*
Ga0137381_103663361	3300012207	Vadose Zone Soil	MWEVVRWMIVFVLALLLIVAAIYLVTGRPLPIPQF*
Ga0137375_103071523	3300012360	Vadose Zone Soil	MGAEAMWDVLRWFAVFVVAVLLIVAGLFLLFGKPLPIPSLF*
Ga0157216_104032522	3300012668	Glacier Forefield Soil	MWEVLRWFSVFVIAVLVMVAGLYWILGKPLPIPSLF*
Ga0157305_100841571	3300012891	Soil	MWEVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0153915_100264565	3300012931	Freshwater Wetlands	MWDVLRWFAVFVIAILLLVAGLFWIMGRPLPIPNF*
Ga0153915_108480492	3300012931	Freshwater Wetlands	MWDVLRWFAVFVVAILLLVAGLFWIMGRPLPIPNF*
Ga0162651_1000969542	3300012938	Soil	MWEVLKWFGVFMLALLLIVAGLFWLMGRPLPIPQF*
Ga0120181_11309542	3300013766	Permafrost	MWDVLRWFFVFVLAVLILVAGRYGILGKPLPIPHLF*
Ga0120158_102329851	3300013772	Permafrost	MWDVLRWFAVFVLAVLVLVAGLYWVLGKPLPIPHSSDSLPGH
Ga0120125_11018882	3300014056	Permafrost	MWDVLRWFSVFVIAILLIVAGLFWIMGRPLPIPSF*
Ga0075320_10543081	3300014255	Natural And Restored Wetlands	VWEVLKWFAVFVIALLLIVAGLFWLMGRPLPLIPSF*
Ga0075316_11595782	3300014314	Natural And Restored Wetlands	MWEVLRWFFVFVLALLLMVAGLFWLMGRPLPIPNF*
Ga0167632_10021244	3300015085	Glacier Forefield Soil	MWDVLRWFAVFVAAILVMVAGLYLILGKPLPVPHLF*
Ga0167629_11966002	3300015209	Glacier Forefield Soil	MWDVLRWFAVFVLAVLALVAGLYWILGKPLPIPNLF*
Ga0132258_110674644	3300015371	Arabidopsis Rhizosphere	MWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0132258_137251832	3300015371	Arabidopsis Rhizosphere	MWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPSF*
Ga0132256_1033508621	3300015372	Arabidopsis Rhizosphere	MWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPTF*
Ga0132255_1003749363	3300015374	Arabidopsis Rhizosphere	VWNVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF*
Ga0184610_10525482	3300017997	Groundwater Sediment	MWDVLRWFAVFVAAVLVIVLGLFWLLDKPFPWPQLF
Ga0184605_103604442	3300018027	Groundwater Sediment	MWDVLRWFAVFVIAIIVIVVGLYWILDKPLPIPQF
Ga0184634_105381762	3300018031	Groundwater Sediment	MWDVLRWFAVFVVAVLVLIWGLYLILGQPFPWPELPF
Ga0184638_10170104	3300018052	Groundwater Sediment	MAWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPSF
Ga0184638_11480152	3300018052	Groundwater Sediment	MWDVLRWFAVFVVAILVIVFGLYLILGKPLPIPPLPWF
Ga0184626_102549942	3300018053	Groundwater Sediment	MWDVLRWFAVFVVAVLVIVVGLFWIFDKPFPWPQLF
Ga0184623_100148512	3300018056	Groundwater Sediment	MTWEVLRWMALFVIALLLIVAGLFWLMGRPLPIPNF
Ga0184623_101472872	3300018056	Groundwater Sediment	MWDVLRWFAVFVVAVLVIVAGLFLLFGKPLPIPSLF
Ga0184623_101738233	3300018056	Groundwater Sediment	MWDVLRWFAVFVAAVLVIVAGLFLLFGKPLPIPSLF
Ga0184637_102212402	3300018063	Groundwater Sediment	MWEVLKWFGMFVVAMLVIVFGLFWLMGRPIPIPNIF
Ga0184617_10196523	3300018066	Groundwater Sediment	MWDVVRWFAVFVIAIIVIVVGLYWILDKPLPIPQF
Ga0184618_100052116	3300018071	Groundwater Sediment	MWDVLRWFAVFVIAILVIVAGLFWILGKPLPIPQLF
Ga0184618_104016161	3300018071	Groundwater Sediment	MWDVLRWFAVFVIAVLVIVMGLFWLFNKPFPWPQLF
Ga0184640_105274901	3300018074	Groundwater Sediment	MWDVLRWFAVFVAAVLVIVAGLYIILGRPLPIPQLF
Ga0184632_103935501	3300018075	Groundwater Sediment	MWDVLRWFAVFVIAILVIVAGLFWIMGRPLPIPSF
Ga0184609_100278704	3300018076	Groundwater Sediment	MWDVLRWFAVFVAAVLVIVLGLFWLFDRPFPWPQLF
Ga0184633_100063205	3300018077	Groundwater Sediment	MWDVVRWFAVFVVAILVIVFGLYLILGKPFPWPQLPF
Ga0184612_101757312	3300018078	Groundwater Sediment	MWDVLRWFAVFVAAILVIVLGLFWLLDKPFPWPQLF
Ga0184612_104522502	3300018078	Groundwater Sediment	MWDVLRWFAVFVVAVLVLVVGLYWILGRPFPWPHLPF
Ga0184625_102593332	3300018081	Groundwater Sediment	MWDVLRWFAVFVVAVLVIVIGLFWLFDKPFPWPQLF
Ga0184629_104496432	3300018084	Groundwater Sediment	MWDVLRWFAVFVIAVLLIVAGLFLVFGKPLPIPQLF
Ga0190272_118529432	3300018429	Soil	MAWEVLRWFAVFVIAMLLIVAGIFWLLDRPLPFPRF
Ga0066667_106406961	3300018433	Grasslands Soil	SRAMWEVLRWMIVFVLALLLIVAAIYLVTGRPLPIPQF
Ga0066662_114457222	3300018468	Grasslands Soil	MWEVVRWMIVFVLALLLIVAAIYLVTGQPLPIPQF
Ga0190270_132169381	3300018469	Soil	MWDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF
Ga0184643_12127212	3300019255	Groundwater Sediment	MWDVLRWFAVFVIAVLLIVAGIYFVLGRPLPLPQLF
Ga0193741_11062201	3300019884	Soil	MWDVLRWFAVFVVAVLVIVAGLFLLFGKPLPIPSF
Ga0193751_100029842	3300019888	Soil	MWDVLRWFSVFVIAILLIVAGLFWIMGRPLPIPQF
Ga0210382_100302093	3300021080	Groundwater Sediment	MGWEVMRWFAMFIIAILLIVAGLFWLMGRPLPFPQF
Ga0193719_100830862	3300021344	Soil	VWDVLKWMLVFVAAVSVLVAGLYLILGKPLPIPHLF
Ga0193719_101248252	3300021344	Soil	MWDVLRWFAVFVIAVLVIVAGLFWIMGRPLPIPQLF
Ga0193695_10397901	3300021418	Soil	MWDVLRWFAVFVIAVLVIVAGIFWIFGKPLPIPQLF
Ga0224500_100465812	3300022213	Sediment	MWDVLRWFAVFVIAVLVMVAGLYWILGKPLPIPNLF
Ga0222623_103741721	3300022694	Groundwater Sediment	ESAMTWEVLRWMALFVIALLLIVAGLFWLMGRPLPIPNF
Ga0209618_10318703	3300025001	Soil	MWDVLRWFSVFVIAVLVMVAGLYWILGKPLPIPSLF
Ga0209109_100296153	3300025160	Soil	MWDVLRWFAVFIAAVLVLVFGLYLILGKPLPLPQIF
Ga0209109_102403662	3300025160	Soil	MWDVLRWFAVFVAAILVIVAGLYIILGKPLPIPQLF
Ga0209108_101482542	3300025165	Soil	MWDVLRWFAVFVAAILVIVAGLYIILGKPLPIPHLF
Ga0209431_101898123	3300025313	Soil	MWEVLKWFGLFVLAMLTIVAGLFWLMGRPITIPNLF
Ga0209431_102197322	3300025313	Soil	MWDVLRWFAVFVVAILVIVFGLYLILGQPLPIPGLPWF
Ga0209431_102903052	3300025313	Soil	MWDVLRWFAVFVAAVLVIVFGLYLILGKPLPIPQIF
Ga0210132_10257601	3300025538	Natural And Restored Wetlands	MWDVVRWFAVFVIAILVIVAGLFWIMGRSLPIPNF
Ga0210076_10152682	3300025567	Natural And Restored Wetlands	VWEVLKWFAVFVIALLLIVAGLFWLMGRPLPFIPSF
Ga0207684_100140581	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LGSRAMWEVLRWMIVFVLALLLIVAAIYLVTGRPLPIPQF
Ga0207684_100515615	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLGSRAMWEVLRWMIVFVLALLLIVAAIYLVTGRALPIPQF
Ga0207646_1000191310	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MWEVLRWMIVFILALLLIVAAIYLVAGRPLPIPQF
Ga0207646_101368742	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MWDVLRWFAVFVIAVLVIVIGLFWLFNKPFPWPQLF
Ga0207646_104566462	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MWDVLRWFAVFVIAILVIVAGLFWIFGKPLPIPQF
Ga0207646_104766132	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MWDVFRWFAVFVIAMLVMVAGLYFVLGKPLPIPSLF
Ga0207644_118310002	3300025931	Switchgrass Rhizosphere	VWEVLKWMAVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0208415_10111612	3300025993	Rice Paddy Soil	MWEVLRWFLVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0208529_10252112	3300026008	Rice Paddy Soil	MWEVLRWMIVFVLALLLIVAGIYLVLGEPLPIPQF
Ga0207708_103670162	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VWEVLKWMAVFVIALLLIVAGLFWLMGRPLPIPQF
Ga0209919_10096622	3300026196	Soil	MWEVLRWFAVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0209919_12306621	3300026196	Soil	MWEVLRWMIVFIAALLLIVAGIYWVLGRPLPIPSF
Ga0209159_10938802	3300026343	Soil	MWEVLRWMIVFVLALLLIVTAIYLVTGRPLPIPQF
Ga0256867_102775612	3300026535	Soil	MWEVLRWFAVFVLALLLMVAGLFWLMGRPLPIPDF
Ga0209805_13438512	3300026542	Soil	MWEVLRWMIVFVLALLLIVAAIYLVTGRTLPIPQF
Ga0209577_100397873	3300026552	Soil	MWEVLRWMIVFVLALLLIVVAIYLVTGRPLPIPQF
Ga0209999_10394103	3300027543	Arabidopsis Thaliana Rhizosphere	WDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF
Ga0214468_10502603	3300027647	Soil	GAQPMWEVLRWFAVFVLALLLIVAGLFWLMGRPLPIPNF
Ga0256866_10029783	3300027650	Soil	MWEVLKWFAVFVIALLLMVAGLFWLMGRPLPIPEF
Ga0209166_100191685	3300027857	Surface Soil	MWEVLRWMIVFVLAVLLIVAAIYLVLGQPLPIPQF
Ga0268264_111087182	3300028381	Switchgrass Rhizosphere	MWDVLRWFAVFVIAVLVLIAGVYLVLGKPLPIPSLF
Ga0307303_100042852	3300028713	Soil	MWEVLKWFAVFVIALLLIVAGLFWLMGRPLPFLPQF
Ga0307320_104566921	3300028771	Soil	AMTWEVLRWMALFVIALLLIVAGLFWLMGRPLPIPNF
Ga0307282_101706102	3300028784	Soil	MWDVLRWFAVFVLAVLLLVAGLYWILGKPLPIPHLF
Ga0307282_101785462	3300028784	Soil	MWDVLRWFAVFVVAVLVIVLGLFWLFDKPFPWPQLF
Ga0307504_100100922	3300028792	Soil	MWDVLRWFAVFIAAILVLVAGLYLILGKPLPIPHLF
Ga0307281_103655342	3300028803	Soil	SIGAEAMWDVLRWFLVFVVAVLVIVTGLFLLFGKPLPIPQLF
Ga0307281_103742431	3300028803	Soil	MWDVLRWFLVFVVAVLVIVTGLFLLFGKPLPIPQLF
Ga0307296_100553353	3300028819	Soil	MWDVLRWFAVFVAAILVIVLGLFWLMDKPFPWPQLF
Ga0307312_100189373	3300028828	Soil	MWDVLRWFAVFVVAVLVIVLGLFWLLDKPFPWPQLF
Ga0299907_100395895	3300030006	Soil	MWEVLKWMIVFVLSLLLIVAGLFWLMGRPLPIPEF
Ga0247826_104700871	3300030336	Soil	NRSAMWDVVRWFAVFVIAVFVLIAGLYWILGKPLPIPSLF
Ga0299914_101724324	3300031228	Soil	MWEVLRWFAVFVFALLLIVAGLFWLMGRPLPIPQF
Ga0299914_104664302	3300031228	Soil	MWEVLRWLGVFAIALLLIVAGLFWLMGRPLPIPQF
Ga0299913_105777562	3300031229	Soil	MWEVLRWFAVFVIALLLIVAGLFWLMGRPLPIPQF
Ga0315556_10731252	3300031256	Salt Marsh Sediment	MWEVLRWMIVFVLAVLLIVMGIYLLLGRPLPIPQF
Ga0310813_101126732	3300031716	Soil	MWDVLRWFAVFVIAVLLIVAGLFLVLGKPLPIPSLF
Ga0310813_111837372	3300031716	Soil	MWEVLKWFAVFVIALLLIVAGLFWLMGRPLPIPQF
Ga0307468_1009602862	3300031740	Hardwood Forest Soil	MWEVLKWFGVFMLALLLIVAGLFWLMGRPLPIPQF
Ga0214473_100601785	3300031949	Soil	MWDVLRWFLVFVVAVLVIVMGLFLLFGKPLPIPSLF
Ga0315540_100220482	3300032061	Salt Marsh Sediment	MWEVLRWMIVFVLALLLIVAGIYLVLGQPLPIPQF
Ga0315281_1000423722	3300032163	Sediment	MWDVLRWFAVFVAAILVIVAILYLIMGRPLPIPNF
Ga0214472_1000430618	3300033407	Soil	MWDVLRWFAVFVIAVLVIVAGLFLVFGKPLPIPQLF
Ga0326726_118790362	3300033433	Peat Soil	MWDVLRWFAVFAAAVLIMIAGLYWVLGKPLPIPHLF
Ga0326731_10753651	3300033502	Peat Soil	MWDVLRWFAVFAAAVLIIIAGLYWVLGKPLPIPHLF
Ga0364930_0065469_777_890	3300033814	Sediment	MWDVLRWFAVFVAAIIMIVFGLYWVMGKPLPIPQLPF
Ga0370484_0014174_938_1048	3300034125	Untreated Peat Soil	MWDVLRWFAVFLAAIMVMVAGLYLVLGRPLPIPHLF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037370

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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