Metagenome / Metatranscriptome Family F037343

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037343
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	55 residues
Representative Sequence	LARKGAKSRRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQAATS
Number of Associated Samples	111
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.47 %
% of genes near scaffold ends (potentially truncated)	99.40 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.452 % of family members)
Environment Ontology (ENVO)	Unclassified (59.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.810 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.03% β-sheet: 0.00% Coil/Unstructured: 37.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF04392	ABC_sub_bind	59.52
PF03401	TctC	8.93
PF08031	BBE	2.38
PF00072	Response_reg	1.79
PF00042	Globin	1.19
PF08734	GYD	1.19
PF01979	Amidohydro_1	1.19
PF00589	Phage_integrase	1.19
PF01627	Hpt	1.19
PF13586	DDE_Tnp_1_2	0.60
PF00891	Methyltransf_2	0.60
PF00106	adh_short	0.60
PF13185	GAF_2	0.60
PF03144	GTP_EFTU_D2	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	59.52
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	8.93
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.38
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	1.19
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.19

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.31 %
Unclassified	root	N/A	14.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.60 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	54.76 %
Unclassified	root	N/A	14.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.19 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.79 %
Unclassified	root	N/A	14.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.52 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.19 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	20.24 %
Unclassified	root	N/A	14.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	1.19 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.19 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.60 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	17.86 %
Unclassified	root	N/A	14.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	1.79 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.19 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	1.19 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.98 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.38 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.79 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.19 %
unclassified Brevundimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas	1.19 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.19 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.60 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.60 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2.98 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.38 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.79 %
Brevundimonas sp. P7753	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. P7753	1.19 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.19 %
Bradyrhizobium sp. CCGB12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGB12	0.60 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.60 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.60 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.60 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10102737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300002070\|JGI24750J21931_1085001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	530	Open in IMG/M
3300004156\|Ga0062589_102287489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	555	Open in IMG/M
3300004268\|Ga0066398_10163881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	566	Open in IMG/M
3300005332\|Ga0066388_100966988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1420	Open in IMG/M
3300005332\|Ga0066388_102243296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300005332\|Ga0066388_103239849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGB12	832	Open in IMG/M
3300005332\|Ga0066388_108117852	Not Available	524	Open in IMG/M
3300005363\|Ga0008090_15857326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	680	Open in IMG/M
3300005447\|Ga0066689_10805318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	584	Open in IMG/M
3300005558\|Ga0066698_10471984	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005598\|Ga0066706_10874257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300005713\|Ga0066905_101954485	Not Available	544	Open in IMG/M
3300005764\|Ga0066903_102312568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1038	Open in IMG/M
3300005764\|Ga0066903_104332559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	758	Open in IMG/M
3300005764\|Ga0066903_107438958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300005764\|Ga0066903_108551752	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005764\|Ga0066903_109093201	Not Available	502	Open in IMG/M
3300005764\|Ga0066903_109120926	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006028\|Ga0070717_10142740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2066	Open in IMG/M
3300006175\|Ga0070712_100105811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2090	Open in IMG/M
3300006794\|Ga0066658_10548945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300009792\|Ga0126374_11072780	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300010046\|Ga0126384_10384024	Not Available	1181	Open in IMG/M
3300010358\|Ga0126370_10229507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1425	Open in IMG/M
3300010358\|Ga0126370_11255138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	692	Open in IMG/M
3300010359\|Ga0126376_10719361	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300010359\|Ga0126376_10945457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300010360\|Ga0126372_12810228	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300010361\|Ga0126378_10731055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1101	Open in IMG/M
3300010361\|Ga0126378_11973322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	665	Open in IMG/M
3300010361\|Ga0126378_12267707	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300010362\|Ga0126377_12819695	Not Available	560	Open in IMG/M
3300010366\|Ga0126379_10346822	Not Available	1513	Open in IMG/M
3300010366\|Ga0126379_10514794	Not Available	1270	Open in IMG/M
3300010366\|Ga0126379_11100352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300010366\|Ga0126379_11610610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300010366\|Ga0126379_11674299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300010366\|Ga0126379_12933883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	571	Open in IMG/M
3300010376\|Ga0126381_101105335	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300010398\|Ga0126383_10720957	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300010398\|Ga0126383_10821819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1013	Open in IMG/M
3300010398\|Ga0126383_12316349	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010398\|Ga0126383_13507447	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300010400\|Ga0134122_12113113	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012205\|Ga0137362_10947578	Not Available	734	Open in IMG/M
3300012210\|Ga0137378_11684832	Not Available	541	Open in IMG/M
3300012211\|Ga0137377_10962802	Not Available	784	Open in IMG/M
3300012362\|Ga0137361_11462270	Not Available	606	Open in IMG/M
3300012497\|Ga0157319_1001113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300012948\|Ga0126375_10638208	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300012958\|Ga0164299_10109753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1452	Open in IMG/M
3300012958\|Ga0164299_10738243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	694	Open in IMG/M
3300012971\|Ga0126369_10338017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1523	Open in IMG/M
3300012971\|Ga0126369_12823264	Not Available	569	Open in IMG/M
3300012971\|Ga0126369_13134418	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300012987\|Ga0164307_10287170	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300012988\|Ga0164306_10014420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4184	Open in IMG/M
3300015372\|Ga0132256_102121318	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300015373\|Ga0132257_102611766	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300016270\|Ga0182036_10281753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1257	Open in IMG/M
3300016270\|Ga0182036_10310676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1202	Open in IMG/M
3300016294\|Ga0182041_10282542	Not Available	1367	Open in IMG/M
3300016319\|Ga0182033_10292829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1340	Open in IMG/M
3300016341\|Ga0182035_10063086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2572	Open in IMG/M
3300016341\|Ga0182035_10740062	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300016341\|Ga0182035_10825260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300016357\|Ga0182032_10386333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1129	Open in IMG/M
3300016357\|Ga0182032_10698609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300016357\|Ga0182032_11705033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300016371\|Ga0182034_10572820	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300016371\|Ga0182034_11981879	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300016404\|Ga0182037_10174609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1643	Open in IMG/M
3300016422\|Ga0182039_10376462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1199	Open in IMG/M
3300016445\|Ga0182038_10308176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1297	Open in IMG/M
3300018469\|Ga0190270_10721547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300019890\|Ga0193728_1314327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300021479\|Ga0210410_10438943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1168	Open in IMG/M
3300021560\|Ga0126371_10782121	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300021560\|Ga0126371_12122865	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300028768\|Ga0307280_10007197	All Organisms → cellular organisms → Bacteria → Proteobacteria	2934	Open in IMG/M
3300031543\|Ga0318516_10433306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	756	Open in IMG/M
3300031543\|Ga0318516_10601966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300031543\|Ga0318516_10673211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	588	Open in IMG/M
3300031546\|Ga0318538_10126061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1340	Open in IMG/M
3300031549\|Ga0318571_10103367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300031549\|Ga0318571_10153529	All Organisms → cellular organisms → Bacteria → Proteobacteria	797	Open in IMG/M
3300031572\|Ga0318515_10065553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1857	Open in IMG/M
3300031640\|Ga0318555_10407603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300031668\|Ga0318542_10364952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	743	Open in IMG/M
3300031680\|Ga0318574_10441442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300031681\|Ga0318572_10654340	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031682\|Ga0318560_10768091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031713\|Ga0318496_10013258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	3954	Open in IMG/M
3300031713\|Ga0318496_10345685	Not Available	822	Open in IMG/M
3300031723\|Ga0318493_10763229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300031724\|Ga0318500_10103008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1301	Open in IMG/M
3300031744\|Ga0306918_10933390	Not Available	675	Open in IMG/M
3300031747\|Ga0318502_10171611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1245	Open in IMG/M
3300031747\|Ga0318502_10508373	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031748\|Ga0318492_10097020	Not Available	1445	Open in IMG/M
3300031748\|Ga0318492_10177282	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300031763\|Ga0318537_10004338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4589	Open in IMG/M
3300031764\|Ga0318535_10131889	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300031768\|Ga0318509_10115809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1457	Open in IMG/M
3300031768\|Ga0318509_10137623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1341	Open in IMG/M
3300031768\|Ga0318509_10704688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300031771\|Ga0318546_10231118	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300031771\|Ga0318546_10763773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300031781\|Ga0318547_10122482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1508	Open in IMG/M
3300031782\|Ga0318552_10551865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. P7753	588	Open in IMG/M
3300031793\|Ga0318548_10187299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1014	Open in IMG/M
3300031795\|Ga0318557_10261515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. P7753	793	Open in IMG/M
3300031797\|Ga0318550_10110743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1300	Open in IMG/M
3300031819\|Ga0318568_10345349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M
3300031819\|Ga0318568_10575936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031833\|Ga0310917_10141672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1580	Open in IMG/M
3300031833\|Ga0310917_10352710	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031833\|Ga0310917_11022210	Not Available	553	Open in IMG/M
3300031845\|Ga0318511_10168589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300031879\|Ga0306919_10295915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1227	Open in IMG/M
3300031879\|Ga0306919_11439705	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031879\|Ga0306919_11449431	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300031879\|Ga0306919_11450154	Not Available	517	Open in IMG/M
3300031880\|Ga0318544_10388450	Not Available	542	Open in IMG/M
3300031890\|Ga0306925_10351321	Not Available	1583	Open in IMG/M
3300031893\|Ga0318536_10128690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1281	Open in IMG/M
3300031893\|Ga0318536_10129262	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300031894\|Ga0318522_10047791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300031941\|Ga0310912_10425449	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031941\|Ga0310912_11011831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300031945\|Ga0310913_10185692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1448	Open in IMG/M
3300031945\|Ga0310913_10230233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300031945\|Ga0310913_10472419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	890	Open in IMG/M
3300031946\|Ga0310910_11162512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300031981\|Ga0318531_10488198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300032001\|Ga0306922_10562654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300032001\|Ga0306922_11150724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	792	Open in IMG/M
3300032008\|Ga0318562_10492584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	711	Open in IMG/M
3300032035\|Ga0310911_10292794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	936	Open in IMG/M
3300032035\|Ga0310911_10393634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300032039\|Ga0318559_10411963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300032042\|Ga0318545_10303181	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300032043\|Ga0318556_10389139	Not Available	729	Open in IMG/M
3300032044\|Ga0318558_10449487	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032044\|Ga0318558_10607071	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300032051\|Ga0318532_10075611	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300032051\|Ga0318532_10309372	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032052\|Ga0318506_10137764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1063	Open in IMG/M
3300032054\|Ga0318570_10530171	Not Available	537	Open in IMG/M
3300032055\|Ga0318575_10137470	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300032060\|Ga0318505_10131804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1150	Open in IMG/M
3300032063\|Ga0318504_10094287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1332	Open in IMG/M
3300032063\|Ga0318504_10387555	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300032064\|Ga0318510_10540932	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032066\|Ga0318514_10164925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1153	Open in IMG/M
3300032068\|Ga0318553_10256348	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300032076\|Ga0306924_10415459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1539	Open in IMG/M
3300032090\|Ga0318518_10694353	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300032094\|Ga0318540_10631331	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300032180\|Ga0307471_100639217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1225	Open in IMG/M
3300032261\|Ga0306920_100918954	Not Available	1278	Open in IMG/M
3300032261\|Ga0306920_101428840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	990	Open in IMG/M
3300032261\|Ga0306920_103068454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300032261\|Ga0306920_103729838	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300033289\|Ga0310914_10541191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300033290\|Ga0318519_10968803	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.02%
Host-Associated	Host-Associated	2.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.02%
Plants	Host-Associated → Plants	2.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.19%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.69%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.60%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.60%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101027372	3300000597	Forest Soil	LARKGAKSRKCITGLRSKTTKASTHVDRLRAANADLKKKLVEALEQQA
JGI24750J21931_10850011	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	VTLSRKGAKSQPRVRGLRSTGTKAIERLRAANADLKKKLDEALEQQTATSDVLRVIS
Ga0062589_1022874891	3300004156	Soil	LSRKGAKSQPRVRGLRSTGTKAIERLRAANADLKKKLDEALEQQTAT
Ga0066398_101638812	3300004268	Tropical Forest Soil	LARKGAKSRIRITGLRSKKTKAGTDVDRLRADNTNLKKKLVEALEQQAATSEVLQVISGSPGEL
Ga0066388_1009669881	3300005332	Tropical Forest Soil	LARKGAKSRRRITGLRSKTTKARTHVDRLRTANADLKKKLAEALEQQ
Ga0066388_1022432962	3300005332	Tropical Forest Soil	AKSRRRITGLRSKTTKARTHVARLRAANADLKRKLAEALQQQAATSEVLRVISSSPVI*
Ga0066388_1032398491	3300005332	Tropical Forest Soil	LARKEAKRRRRITGLRSNTTKATTDVARLRTINADLKKKLAKALEQQTATSEV
Ga0066388_1081178522	3300005332	Tropical Forest Soil	LARKGAKSRTRITGLRSKTTKARTPVDRLRAANAHLKKKLAEALEQQTATSDVL
Ga0008090_158573262	3300005363	Tropical Rainforest Soil	LSRKGAKSRARITGLRSKTTKARSHVDRLRAANTDLKKKLAEALEQEAATSEILRVISAS
Ga0066689_108053181	3300005447	Soil	LSRKGAKSRTRITGLRSKTTKARTPVDSLRAANADLKKRLAEALEQQSATSEVLRVISS
Ga0066698_104719841	3300005558	Soil	LARKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKRLAEALEQQTATS
Ga0066706_108742572	3300005598	Soil	MGAIQVTLSRKGAKSRKRITGLRSKTTKARTPVDRLRAANTDLKKKLAEALEQQT
Ga0066905_1019544851	3300005713	Tropical Forest Soil	LSRKGAKSRRRITGLRSKTTKARTDVDRLRAANADLKKKLAEALEQQTATSE
Ga0066903_1023125682	3300005764	Tropical Forest Soil	LARKGAKSRRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQAATS
Ga0066903_1043325591	3300005764	Tropical Forest Soil	LAHKGAKSRTRITGLRSKTTKARTHADRLRAANADLKKKLAEALEQQ
Ga0066903_1074389581	3300005764	Tropical Forest Soil	LARKAAKTRRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQA
Ga0066903_1085517521	3300005764	Tropical Forest Soil	LARKGAKTRTRITGLRSKTTKARTHIGRIREPSAELENKLAEALEQQVATA
Ga0066903_1090932012	3300005764	Tropical Forest Soil	LARKGAKSRRRITGLRSKTTKARTHVDRGAANADLKKKLAEALDQQAATSEV
Ga0066903_1091209262	3300005764	Tropical Forest Soil	LSRKGGKSRRRTTGLRLKTTKARTHVDRLRAANADLKKKLAEALEQQTA
Ga0070717_101427401	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LARKGAKSRRPATSLRSKATKAGTQVDSLRAANAELKKKLAEALEQQIATSE
Ga0070712_1001058113	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LARKGAKSRRPATSLRSKATKAGTQVDSLRAANAELKKKLAEALEQQIATSEVLQVISTSSG
Ga0066658_105489451	3300006794	Soil	LSRKGAKSRTRITGLRSKTTKARTHVDRLSPANADLKKKLAQALEQQAATAEMLRVISTSPG
Ga0075424_1006927971	3300006904	Populus Rhizosphere	LSRKEAKSRTRVRGLRSTGTKARTDVDRLRASNAELEKKLAEALEQQ
Ga0126374_110727801	3300009792	Tropical Forest Soil	VILARTGEKSRRRITGLRSKAAKARTRVDCLRAANTDLKKKLAEAQEQQAATSEVLKVISRS
Ga0126384_103840241	3300010046	Tropical Forest Soil	LSHKGAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALE
Ga0126370_102295073	3300010358	Tropical Forest Soil	VIVARKRAKSRRRITGLRSNKTKARTNVDRLRAANADLKKKLAEALEQQT
Ga0126370_112551382	3300010358	Tropical Forest Soil	VSNADEVTLSHKGAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQTATS
Ga0126376_107193612	3300010359	Tropical Forest Soil	VNRRPTADEVILARKGAKSRRRITSLRSKTTKARTHVDRLRAANADLKKKLA
Ga0126376_109454571	3300010359	Tropical Forest Soil	VILSRKGAKSRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALDQQTATSEVLGVISN
Ga0126372_128102282	3300010360	Tropical Forest Soil	VKRRPTADEVILARKGAKSRRRITSLRSKTTKARTHVDRPRAANADLKKKLAEALEQQAA
Ga0126378_107310552	3300010361	Tropical Forest Soil	LAKSRRSITGLRSKTTEARTHVDRLRAANADLKKKLAEALEQ
Ga0126378_119733221	3300010361	Tropical Forest Soil	VTLSHKGAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQTATSEVLE
Ga0126378_122677072	3300010361	Tropical Forest Soil	VILARKGAKSRRRITGLRSKTTKARTHVDRGAANADLKKKLAEALDQQAAT
Ga0126377_128196953	3300010362	Tropical Forest Soil	VTLSRKEAKSRRRITGLRSKTTKARTYVDRLRAANADLTKKLAEAREQQTAIS
Ga0126379_103468223	3300010366	Tropical Forest Soil	VILARKGTKSRRRIAGLRSKTTKARTHVDRLRAAKADLKKKLAEALEQQTA
Ga0126379_105147942	3300010366	Tropical Forest Soil	LARKGAKSRTQVTGLRSKTTKATTDVDRLRAANTDLKKKLAEALEQQTATSEVLRVIS
Ga0126379_111003521	3300010366	Tropical Forest Soil	VILARTGEKSRRRITGLRSKAAKARTRVDCLRAANTDLKKKLAEAQEQQAATSEVLKVISRSA
Ga0126379_116106102	3300010366	Tropical Forest Soil	VILARKRAKTRRHTGLRSKTTKSRTHFDRLRAANADLKKKLAEALEQQSATAEVLRLIS
Ga0126379_116742991	3300010366	Tropical Forest Soil	VILARKGAKSQRRVTGLRSKTTKARTRVDRVRAANAGLKEKLAEALEQQAATS
Ga0126379_129338833	3300010366	Tropical Forest Soil	VDCADEVILARKGAKSRRRITGLRSKTTKASTHIDRIRKANADLKKKLAE
Ga0126381_1011053352	3300010376	Tropical Forest Soil	LARKGAESRRRITGLRSKTTKATTDVARLRAANADLKKKLAEALEQQTATSEVLRVIA
Ga0126383_107209572	3300010398	Tropical Forest Soil	VILARKGAKSQRSVTGLRSKTTKARTHVGRLRAANADLKKKLAEALEQQTATSEVLR
Ga0126383_108218193	3300010398	Tropical Forest Soil	LSRKGPKSRRRITGLRSKTTKARTHVNRLRAANADLKKKLAEALEQQTAT
Ga0126383_123163492	3300010398	Tropical Forest Soil	VILARKGAKSRRRITGLRSKTTKARTHVDRLPAANADLKKKLAEALEQQSATAEVLRLIS
Ga0126383_135074471	3300010398	Tropical Forest Soil	LSRKGTKSRRQVTGLRSKTTKARTDVDSLGAANADLKKKLAEALEQQTAT
Ga0134122_121131131	3300010400	Terrestrial Soil	VILSRKGAKSRTRGGGLRSKKTKAGAQLDRLRASNADLKKKLAEALEQQTATSEVLQVISRSPG
Ga0137362_109475781	3300012205	Vadose Zone Soil	LILGMGRFQVTSSRKGAKSRKRITGLRSKTTKARTPVDRLRAANTDLKKKLAEALEQ
Ga0137378_116848322	3300012210	Vadose Zone Soil	MGAIQVTLSRKGAKSRKRITGLRSKTTKARTHVDRLRAANADLKKRLGQALEQQTATSEVLRVISSSP
Ga0137377_109628022	3300012211	Vadose Zone Soil	MGAIQVTLSRKGAKSRKRITGLRSKTTKARTPVDRLRAANTDLKK
Ga0137361_114622702	3300012362	Vadose Zone Soil	LARKGAKSRTRISGLRSKTTKAKTPVDRLRAANADLNNADLKKRL
Ga0157319_10011134	3300012497	Arabidopsis Rhizosphere	LSRKGAKSQTRVRGLRSSGTKTSTLVERLRTSNAELEKKLAE
Ga0126375_106382081	3300012948	Tropical Forest Soil	LSRKGAKSRRRITGLRSKTTKARTDVDRLRAANADLKKKLAEALEQQTATSEVLQVIG
Ga0164299_101097531	3300012958	Soil	VTLSRKGAKSQPRVRGLRSTGTKAIERLRAANADLKKKLDEALEQQT
Ga0164299_107382432	3300012958	Soil	VILSRKGAKSRRRTTSLRSTRTKATAYDARIDDLEKKLAEALEQQTATSAVLQVISSSPGEL
Ga0126369_103380171	3300012971	Tropical Forest Soil	LSRKGPKSRRRITGLRSKTTKARTHVNRLRAANADLKKKLAEALEQ
Ga0126369_128232642	3300012971	Tropical Forest Soil	VTLSHKGAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQ
Ga0126369_131344181	3300012971	Tropical Forest Soil	VILSRKEAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQTATSEVLE
Ga0164307_102871701	3300012987	Soil	VTLSRKGAKSQFRVRGLRSTGAKATHVERLRAANADLKKKLAEALEQQAATSEVLGVISSSPG
Ga0164306_100144205	3300012988	Soil	LSRKGAKSQPRVRGLRSTGTKAIERLRAANADLNKHLEGALVQQTA
Ga0132256_1021213181	3300015372	Arabidopsis Rhizosphere	VTLSHKGAKSRTRIPGLRSTGTKATAYDARIDDLEKKLAEALEQQIATSEVLGVISSSRGELK
Ga0132257_1026117662	3300015373	Arabidopsis Rhizosphere	VTLARKGAKSQRPATSLRSKATKATTDVERLRAANADLKKQLADALEQQTATSEVLRVISGSRVE
Ga0182036_102817531	3300016270	Soil	LARKGAKSRTRITGLRSKTTKAGTHVDGLRAANADLKKKLAEALEQQTATSEVLRVISSS
Ga0182036_103106761	3300016270	Soil	LSRKEAKSRRRITGLRSKTTKARTHVDRLRAANADLKKKLAEAREQQTATSD
Ga0182041_102825421	3300016294	Soil	VTLSRKGAKSRRSITGLRSKTTEARTHVDRLRAANADLKKKLAEALEQQ
Ga0182033_102928293	3300016319	Soil	LSRKGAKSRTRITGLRSKTTKAGTHVDGLRAANADLKKKLAEALEQQ
Ga0182035_100630861	3300016341	Soil	VTLAHKGAKSRTRISGLRSKTTKAKTHVDRLRAANADLKKKLAE
Ga0182035_107400622	3300016341	Soil	VTLSRKGAKSRRSITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQ
Ga0182035_108252601	3300016341	Soil	LSRKEAKSRRRITGLRSKTTKASTHVDRLRAANADLTKKLAEAREQQTATSDVLKV
Ga0182032_103863331	3300016357	Soil	VILARKRAKTRRHTGLRSKTTKSRTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISISPGK
Ga0182032_106986091	3300016357	Soil	LARKGAKSRRCITGLRSKATKARTHVDRLRAANADLKKKLAEA
Ga0182032_117050332	3300016357	Soil	LARKGAKSRRSITGLRSKTTEARTHVDRLRAANADLKKKLAEALEQQTATSEVLKVISSSLG
Ga0182034_105728202	3300016371	Soil	LARKGAKSGRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTA
Ga0182034_119818791	3300016371	Soil	VILAGKGAKSRRRITGLRSKTTKARTHVDSLRAANADLKKKLAEALEQQAATSEV
Ga0182037_101746091	3300016404	Soil	VILARKGTKSRRRIAGLRSKTTKARTHVDRLRAAKADLKKKLAGALEQQTATSDVLGIISSSPGE
Ga0182039_103764622	3300016422	Soil	LARKGVKSRRHITGLRSNETKARTHVDSLRAANADLKKKLAEALEQ
Ga0182038_103081764	3300016445	Soil	LTRKGVKSRRRITGLRSNKTKARTNVDRLRAANADLKKKL
Ga0190270_107215471	3300018469	Soil	LSRKGAKSQPRVRGLRSTGTKAIERLRATNADLKKKLDEALEQQTATSDVLRV
Ga0193728_13143271	3300019890	Soil	VTLARKGAKSRTPARKPRSTRTKASAGVDRLRAANADLKKQLAEALEQQTAA
Ga0210410_104389433	3300021479	Soil	VTLARKGAKSRTPARNLRSRRTKATAGVDRLRAANADLKKQLAEALEQQTATSEVL
Ga0126371_107821212	3300021560	Tropical Forest Soil	VILARKGAKSRRRITGLRSKTTKARTHVDRLRAANADLKKKLTESLEQQAA
Ga0126371_121228652	3300021560	Tropical Forest Soil	LARKGAKSRTHITGLRSKTTKARTHVDRLRAANADLKKKLAE
Ga0307280_100071973	3300028768	Soil	LSRKGAKSRRGTTALRLKTTKGKTHVDRIRAANADLKKRLAEAL
Ga0318516_104333062	3300031543	Soil	LARKGVKSRRHITGLRSNETKARTHVDSLRAANADLKKKLAEALEQQAATSEVLGVI
Ga0318516_106019662	3300031543	Soil	LTRKGAKSRTRITGLRSKTTKARTHVDRFRATNADLKKKLAEALEQQAATSEVLRTISN
Ga0318516_106732111	3300031543	Soil	LTRKGAKSRRRTTGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEV
Ga0318538_101260612	3300031546	Soil	LARKGAKSRTRITGLRSKTTKAGTHVDGLRAANADLKKKLAEALEQQTATSEVLR
Ga0318571_101033673	3300031549	Soil	VTLAHKGAKSRTRIGGLRSKTTKAKTHVDRLRAANADLKKKLAESLEQQMATAEVLQVISSSPGE
Ga0318571_101535292	3300031549	Soil	VTLSRKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATAE
Ga0318515_100655534	3300031572	Soil	VPTRGSWLAKGRRAEDSLPGLRSKTTKARTHVDRLRAANAGLKKKLAEALEQQTATSEVLGVI
Ga0318555_104076031	3300031640	Soil	LSRKEAKSRRRITGLRSKTTKASTHVDRLRAANADLTKKLAEAREQQTATSDVLKVISRS
Ga0318542_103649521	3300031668	Soil	VTLSRKGAKSRRSITGLRSKTTKARTHVDRVRAANADLKMKLAEALEQ
Ga0318574_104414421	3300031680	Soil	LARKGAKSRTHITGLRSKTTRARTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISISPGKLEPVF
Ga0318572_106543402	3300031681	Soil	LSRKGAKSRTGITSLRSKTTKARTHVDRLREANADLKKKLAEALEQQTAA
Ga0318560_107680911	3300031682	Soil	LSLKGAKSRTRITDLRSKTTKARTHVDRLRAANADLKKKLVEARQQQAATSEVLGVISHSPGELARVFQV
Ga0318496_100132583	3300031713	Soil	VILSRKQTKNRTRITRLRSKATKARPHIDRLGAANADLKKKPAEALELDIN
Ga0318496_103456851	3300031713	Soil	MTLARKGAKSRRSITGLRSKTTEARTHVDRLRAANADLKKKLA
Ga0318493_107632292	3300031723	Soil	LAGKGAKSRRRITNLRSKTTKARTHVDSLRAANADLKKKLAEAIEQQTATSQ
Ga0318500_101030081	3300031724	Soil	LARKGAKSRRRITGLRSKTTEARTHVDRLRAANADLKKKLAEALEQQTATSEVLQVISSSSGELE
Ga0306918_109333902	3300031744	Soil	LSRKGAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQTATSEVLEVIS
Ga0318502_101716111	3300031747	Soil	VILARKRAKTRRHTGLRSKTTKSRTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISISPGKLAPVFQA
Ga0318502_105083732	3300031747	Soil	LARKEAKSRRRITGLRSKTTEARTHVDRLRAANAHLKKKLAEALEQEAATSEILRVISAALGDIQSV
Ga0318492_100970203	3300031748	Soil	VILARKGTKSRRRIAGLRSKTTKARTHVDRLRAAKADLKKKLAEALEQQTAAS
Ga0318492_101772821	3300031748	Soil	LARKGAKSRTHITGLRSKTTRARTHVDRLRAANADLKKKLAEALEQRSATAEVLRLISIS
Ga0318537_100043386	3300031763	Soil	LARKGVKSRRHITGLRSNETKARTHVDSLRAANADLKKKLAEALEQQAATSEVLGVISSS
Ga0318535_101318891	3300031764	Soil	VTLSLKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEVLQVIGSSPG
Ga0318509_101158093	3300031768	Soil	LTRKGAKSRTRITGLRSKTTKARTHVDRFRATNADLKKKLAEALEQQAATSEVLRTISNSPGEL
Ga0318509_101376231	3300031768	Soil	VTLSRKEAKSRRRITGLRSKTTKARTHVDRLRAANADLTKKLAEAREQQTATSD
Ga0318509_107046881	3300031768	Soil	VILARRGAKSGRRITSLRSKTTKARTHVDRLRAANADLKKKLADALEQQAATSEVLRVI
Ga0318546_102311181	3300031771	Soil	VILARKGVKSRRRITSLRSKTTKARTRVDRLRAANADLKKKLAEALEQQTATSE
Ga0318546_107637731	3300031771	Soil	VTLSRKGAKSRRSITGLRSKTTEARTHVDRLRAANADLKKKLAEALQQQT
Ga0318547_101224823	3300031781	Soil	VILARKGVKSRRRITSLRSKTTKARTRVDRLRAANADLKKKLAEALEQQTATNEILGVIAASP
Ga0318552_105518651	3300031782	Soil	LARKRAKTRRHTGLRSKTTKSRTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISISPGKLE
Ga0318548_101872991	3300031793	Soil	LARKRAKTRRHTGLRSKTTKSRTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISISPGKLAPVFQA
Ga0318557_102615151	3300031795	Soil	LARKRAKTRRHTGLRSKTTKSRTHVDRLRAANADLKKKLAEALEQQSATAEVLRLIS
Ga0318550_101107432	3300031797	Soil	VILARKGAKSRTRITGLRSKTTKAGTHVDGLRAANADLKKKLAEALEQQ
Ga0318568_103453491	3300031819	Soil	VTLSLKGAKSRTRITDLRSKTTKARTHVDRLRAANADLKKKLVEARQQQAATSEVLGVISHSPGELARVFQVMLE
Ga0318568_105759362	3300031819	Soil	VTLAHKGAKSRTRISGLRSKTTKAKTHVDRLRAANADLKKKLAESLEQQRATAEVL
Ga0310917_101416723	3300031833	Soil	VDEMTLSRKGAKSRRRITGLRSKTTKARTHVDRLRAADADLKKKLAEALEQQTGTSEVLGVISNSTAEL
Ga0310917_103527101	3300031833	Soil	LARKGAKSGRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEVLSVISSSPGQL
Ga0310917_110222101	3300031833	Soil	LSRKRAKSRRRITGLRSKTTKARTHVDRLRAANADLKTKLTEALEQQAATSEVLQVISRSPGELK
Ga0318511_101685891	3300031845	Soil	LASKGAKSRTRITGLRSKTTKAGTHVDRLRAANADLKKKLAEALEQQAATSEVLSVISRS
Ga0306919_102959151	3300031879	Soil	VTLSRKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKKLAEAL
Ga0306919_114397051	3300031879	Soil	LARKEAKSRRRITGLRSKTTEARTHVDRLRAANAHLKKKLAEALEQEAATSEILRVI
Ga0306919_114494311	3300031879	Soil	LARKGAKSRRRITGLRSKTTKARTYVDRLRAANADLKKKLAEA
Ga0306919_114501541	3300031879	Soil	LSRKGAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQTATSEVLEVISVSAGN
Ga0318544_103884501	3300031880	Soil	LARKRAKTRRHTGLRSKTTKSRTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISISP
Ga0306925_103513211	3300031890	Soil	LSRKGAKSRRRITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQTATSEVL
Ga0318536_101286902	3300031893	Soil	VTLSRKGAKSRRSITGLRSKTTKARTHVDRVRAANADLKKKLAEALEQQTA
Ga0318536_101292621	3300031893	Soil	LARKGAKSRTHITGLRSKTTRARTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISIS
Ga0318522_100477913	3300031894	Soil	VILARKGAKSRTRITGLRSKTTKAGTHVDGLRAANADLKKKLAEAL
Ga0310912_104254491	3300031941	Soil	LARKGVKSRRRITSLRSKTTKARTRVDRLRAANADLKKKLAEALEQQTATS
Ga0310912_110118311	3300031941	Soil	LARKGAKSRRCITGLRSKATKARTHVDRLRAANADLKKKLAEALE
Ga0310913_101856923	3300031945	Soil	LARKGVKSRRHITGLRSNETKARTHVDSLRAANADLKKKLAEALEQQTATSEVLGVISSS
Ga0310913_102302332	3300031945	Soil	VTLSRKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEVLS
Ga0310913_104724191	3300031945	Soil	LTRKGVKSRRRITGLRSNKTKARTNVDRLRAANADLKKKLAEALEQQTAT
Ga0310910_111625121	3300031946	Soil	LARKGAKSRRRITGLRSKTTKARTHVDRLRAANADLEKKLAEALEQQAATSEVL
Ga0318531_104881982	3300031981	Soil	LARKGAKSRTRISGLRSKTTKAKTPVDRLRAANADLNNADLKKRLAEALEQQTA
Ga0306922_105626541	3300032001	Soil	VTLARKGAKSRRSITGLRSKTTEARTDVDHLRAANADLKKKLAEALEQQTAASE
Ga0306922_111507241	3300032001	Soil	VILTRKGAKSRRRTTGLRSKTTKARTHVDRLRAANADLKKKLAEALELEAATSEILRVISAS
Ga0318562_104925841	3300032008	Soil	VILTRKGAKSRRRTTGLRSKTTKARTHVDRLRAANADLKKKLAEALELEAATSEILRVISASLADIQSVLD
Ga0310911_102927941	3300032035	Soil	LARKGVKSRRRITGLRSETTKARTHVDRANADLKKKLAEALEQQAATADLLKVISRSTFD
Ga0310911_103936341	3300032035	Soil	VDEMTLSRKGAKSRRRITGLRSKTTKARTHVDRLRAADADLKKKLAEALEQQTGTSEVLGLISNSP
Ga0318559_104119632	3300032039	Soil	LAGKGAKSRRRITNLRSKTTKARTHVDSLRAANADLKKKLAEAI
Ga0318545_103031811	3300032042	Soil	LARKGAKSGRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEVLSVISSSPG
Ga0318556_103891392	3300032043	Soil	LARKGAKSRTRITGLRSKATEARTHVDRLRAANADLKKKLAEALEQQAATSEVLGVISSSPGVRNTN
Ga0318558_104494871	3300032044	Soil	LARKGAKSRRSITGLRSKTTEARTHVDRLRAANADLKKKLAEALAQQ
Ga0318558_106070712	3300032044	Soil	LARKGAKSRRRITGLRSKTTEARTEVARLRAANADLKKKLAEALEQQTA
Ga0318532_100756111	3300032051	Soil	LSRKGAKSRTGITSLRSKTTKARTHVDRLREANADLKKKLAEALEQQTA
Ga0318532_103093721	3300032051	Soil	LDRKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEVLGVSQLPPHSKNE
Ga0318506_101377642	3300032052	Soil	VTLARKGAKSRRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATAEVLE
Ga0318570_105301711	3300032054	Soil	LARKRAKTRRHTGLRSKTTKSRTHVDRLRAANADLKKKLAEALEQQSATAEVLRLISISPGKLA
Ga0318575_101374702	3300032055	Soil	VTLSLKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEVL
Ga0318505_101318041	3300032060	Soil	VILARKGAKSRTRITGLRSKTTKAGTHVDGLRAANADLKKKLAEALEQQT
Ga0318504_100942872	3300032063	Soil	VTLARKGAKSRTRITSLRSKTTKARTHVDRLRAANADLKKKLAEALEQQAATSEVLSVIGSSPGQLE
Ga0318504_103875552	3300032063	Soil	VIVARKGAKSRRRITGLRSKTTKARTHVNRLRAANADLKKKLAEALEQQTATSEVLQVISSSPLPAPSTQKARITN
Ga0318510_105409322	3300032064	Soil	LARKGVKSRRRITSLRSKTTKARTRVDRLRAANADLKKKLAEALEQQTA
Ga0318514_101649253	3300032066	Soil	LTRKGVKSRRRITGLRSNKTKARTNVDRLRAANADLKKKLAEALEQQTA
Ga0318553_102563482	3300032068	Soil	LARKGAKSGRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATSEVL
Ga0306924_104154593	3300032076	Soil	VTLARKGAKSRRRITGLRSKTTKARTHVDRLRAANADLKKKLAEALEQQTATAE
Ga0318518_106943531	3300032090	Soil	LSRKGAKSRTRITGLRPKTTKARTHVDRLRAANADLKKKLAEALEQQTATAEVLEVIS
Ga0318540_106313311	3300032094	Soil	VILARKGVKSRRRITSLRSKTTKARTRVDRLRAANADLKKKLAEALEQQTATNEIL
Ga0307471_1006392171	3300032180	Hardwood Forest Soil	LARKGAKSRTPARKPRSTRTKASAGVDRLRAANADLKKQLAEALEQQTAASEVLRVISGARGEL
Ga0306920_1009189542	3300032261	Soil	VKSRRRITGLRSKTTEARTHVDSLRAANADLKKKLAEALEQQTATSEV
Ga0306920_1014288401	3300032261	Soil	VILARKGAKSRRPITSLRSKATKGRTHVDRLRAANVDLKKKLAEALEQQTAAADVLKVIS
Ga0306920_1030684542	3300032261	Soil	LARKGAKSRGCITGLRSKATKARTHVDRLRAANADLKKKLAEALEQQTASAEVLQVISSSPGE
Ga0306920_1037298382	3300032261	Soil	VKRRPTADEGILSRKGAKSRTRITGLRSKTTKARTHVDRLRAANADLKKKLAE
Ga0310914_105411911	3300033289	Soil	LAHKGAKSRRRITGLRSNTTKARTHVDSLRAANADLKKKLDEALEQQTATAEVLQVISSS
Ga0318519_109688032	3300033290	Soil	LARKGVKSRRRITGLRSKTTKARTHVDSLRAANADLKKKLAEALEQQTATSDVLRVIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037343

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences