Metagenome / Metatranscriptome Family F037227

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037227
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	71 residues
Representative Sequence	MANMTVLEGIIEDVSVELYQKLWNAIPVEEQTEDSSKAIGLNSRETTLFVIQSFMNKFNAAAEELKDK
Number of Associated Samples	97
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.33 %
% of genes near scaffold ends (potentially truncated)	18.45 %
% of genes from short scaffolds (< 2000 bps)	58.93 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.452 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (17.857 % of family members)
Environment Ontology (ENVO)	Unclassified (53.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (70.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.38% β-sheet: 0.00% Coil/Unstructured: 40.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
a.128.1.0: automated matches	d3lsna1	3lsn	0.74703
c.124.1.5: IF2B-like	d1t5oa1	1t5o	0.71558
c.124.1.5: IF2B-like	d2a0ua1	2a0u	0.71175
f.21.2.1: Fumarate reductase respiratory complex cytochrome b subunit, FrdC	d2bs2c_	2bs2	0.68397
f.41.1.1: Preprotein translocase SecY subunit	d1rh5a_	1rh5	0.67505

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF00082	Peptidase_S8	35.71
PF00085	Thioredoxin	30.95
PF02467	Whib	2.38
PF00166	Cpn10	2.38
PF05257	CHAP	1.79
PF09834	DUF2061	1.79
PF07691	PA14	1.19
PF00210	Ferritin	1.19
PF00436	SSB	0.60
PF12804	NTP_transf_3	0.60
PF01755	Glyco_transf_25	0.60
PF13884	Peptidase_S74	0.60
PF00565	SNase	0.60
PF00227	Proteasome	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	2.38
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.60
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.60
COG3306	Glycosyltransferase involved in LPS biosynthesis, GR25 family	Cell wall/membrane/envelope biogenesis [M]	0.60
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
All Organisms	root	All Organisms	31.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
cellular organisms	root	All Organisms → cellular organisms	26.79 %
Viruses	superkingdom	All Organisms → Viruses	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.79 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.29 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13.69 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.17 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	13.69 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.17 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	13.69 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.38 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	13.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.38 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.45 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	13.69 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.38 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10000980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	11434	Open in IMG/M
3300000756\|JGI12421J11937_10002811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	7008	Open in IMG/M
3300001274\|B570J13895_1026133	Not Available	562	Open in IMG/M
3300002195\|metazooDRAFT_1227717	Not Available	861	Open in IMG/M
3300002296\|B570J29587_1004734	Not Available	1022	Open in IMG/M
3300002835\|B570J40625_100237918	Not Available	1916	Open in IMG/M
3300003277\|JGI25908J49247_10167914	Not Available	508	Open in IMG/M
3300004096\|Ga0066177_10559168	Not Available	510	Open in IMG/M
3300004112\|Ga0065166_10082240	Not Available	1139	Open in IMG/M
3300004112\|Ga0065166_10136351	Not Available	926	Open in IMG/M
3300004112\|Ga0065166_10260725	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300004240\|Ga0007787_10088558	Not Available	1434	Open in IMG/M
3300004240\|Ga0007787_10168147	Not Available	1059	Open in IMG/M
3300004240\|Ga0007787_10596585	Not Available	553	Open in IMG/M
3300005527\|Ga0068876_10042099	All Organisms → cellular organisms → Bacteria	2812	Open in IMG/M
3300005527\|Ga0068876_10066118	Not Available	2184	Open in IMG/M
3300005527\|Ga0068876_10165514	Not Available	1294	Open in IMG/M
3300005527\|Ga0068876_10256998	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300005528\|Ga0068872_10013038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5799	Open in IMG/M
3300005528\|Ga0068872_10255983	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005528\|Ga0068872_10300220	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005581\|Ga0049081_10051144	Not Available	1564	Open in IMG/M
3300005581\|Ga0049081_10070039	Not Available	1318	Open in IMG/M
3300005584\|Ga0049082_10015907	Not Available	2578	Open in IMG/M
3300005584\|Ga0049082_10037635	Not Available	1695	Open in IMG/M
3300005662\|Ga0078894_10085624	All Organisms → cellular organisms → Bacteria	2753	Open in IMG/M
3300005662\|Ga0078894_10223828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1704	Open in IMG/M
3300005662\|Ga0078894_10405479	Not Available	1232	Open in IMG/M
3300005662\|Ga0078894_10411113	Not Available	1222	Open in IMG/M
3300005662\|Ga0078894_10412830	Not Available	1219	Open in IMG/M
3300005662\|Ga0078894_10549287	Not Available	1033	Open in IMG/M
3300005805\|Ga0079957_1107984	Not Available	1500	Open in IMG/M
3300005940\|Ga0073913_10011483	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300006484\|Ga0070744_10003444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4753	Open in IMG/M
3300007708\|Ga0102859_1173161	Not Available	637	Open in IMG/M
3300007861\|Ga0105736_1155626	Not Available	525	Open in IMG/M
3300008107\|Ga0114340_1003299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	10419	Open in IMG/M
3300008107\|Ga0114340_1003790	Not Available	8348	Open in IMG/M
3300008107\|Ga0114340_1005834	Not Available	8061	Open in IMG/M
3300008107\|Ga0114340_1014574	All Organisms → cellular organisms → Bacteria	3789	Open in IMG/M
3300008107\|Ga0114340_1018541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3308	Open in IMG/M
3300008107\|Ga0114340_1025406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4473	Open in IMG/M
3300008107\|Ga0114340_1031908	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300008107\|Ga0114340_1116124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1845	Open in IMG/M
3300008107\|Ga0114340_1197297	Not Available	680	Open in IMG/M
3300008107\|Ga0114340_1199699	Not Available	673	Open in IMG/M
3300008107\|Ga0114340_1199982	Not Available	672	Open in IMG/M
3300008108\|Ga0114341_10077643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2072	Open in IMG/M
3300008110\|Ga0114343_1001694	Not Available	19960	Open in IMG/M
3300008110\|Ga0114343_1006641	Not Available	10712	Open in IMG/M
3300008110\|Ga0114343_1012962	All Organisms → cellular organisms → Bacteria	7275	Open in IMG/M
3300008110\|Ga0114343_1065566	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300008110\|Ga0114343_1208214	Not Available	557	Open in IMG/M
3300008113\|Ga0114346_1002080	Not Available	19944	Open in IMG/M
3300008114\|Ga0114347_1005781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	6769	Open in IMG/M
3300008114\|Ga0114347_1139147	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300008114\|Ga0114347_1167676	Not Available	768	Open in IMG/M
3300008120\|Ga0114355_1036198	Not Available	2392	Open in IMG/M
3300008120\|Ga0114355_1201285	Not Available	641	Open in IMG/M
3300008258\|Ga0114840_1006377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2066	Open in IMG/M
3300008258\|Ga0114840_1026860	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300008264\|Ga0114353_1115550	Not Available	1409	Open in IMG/M
3300008266\|Ga0114363_1008025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5153	Open in IMG/M
3300008962\|Ga0104242_1076566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	557	Open in IMG/M
3300009056\|Ga0102860_1239474	Not Available	524	Open in IMG/M
3300009059\|Ga0102830_1080303	Not Available	972	Open in IMG/M
3300009158\|Ga0114977_10012876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5289	Open in IMG/M
3300009183\|Ga0114974_10462383	Not Available	717	Open in IMG/M
3300009419\|Ga0114982_1000558	Not Available	19827	Open in IMG/M
3300010970\|Ga0137575_10000433	Not Available	8804	Open in IMG/M
3300013004\|Ga0164293_10040117	Not Available	3836	Open in IMG/M
3300013004\|Ga0164293_10097523	Not Available	2263	Open in IMG/M
3300013004\|Ga0164293_10229982	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1321	Open in IMG/M
3300013004\|Ga0164293_10753187	Not Available	620	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10013475	Not Available	9420	Open in IMG/M
3300013372\|Ga0177922_11228276	Not Available	1252	Open in IMG/M
3300014050\|Ga0119952_1042821	Not Available	1280	Open in IMG/M
3300017766\|Ga0181343_1089630	Not Available	878	Open in IMG/M
3300017774\|Ga0181358_1006200	Not Available	5096	Open in IMG/M
3300020048\|Ga0207193_1106906	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2519	Open in IMG/M
3300020141\|Ga0211732_1472785	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300020151\|Ga0211736_10017456	Not Available	1964	Open in IMG/M
3300020151\|Ga0211736_10329506	Not Available	3797	Open in IMG/M
3300020151\|Ga0211736_10719791	Not Available	1111	Open in IMG/M
3300020151\|Ga0211736_10984492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4393	Open in IMG/M
3300020159\|Ga0211734_10511835	Not Available	2142	Open in IMG/M
3300020159\|Ga0211734_11038523	Not Available	1531	Open in IMG/M
3300020161\|Ga0211726_10708205	All Organisms → cellular organisms → Bacteria	7227	Open in IMG/M
3300020172\|Ga0211729_10741750	All Organisms → cellular organisms → Bacteria	9799	Open in IMG/M
3300020172\|Ga0211729_11423704	Not Available	894	Open in IMG/M
3300020486\|Ga0208698_111484	Not Available	697	Open in IMG/M
3300020506\|Ga0208091_1003012	Not Available	2448	Open in IMG/M
3300020527\|Ga0208232_1029739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	747	Open in IMG/M
3300020572\|Ga0207909_1022768	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300020572\|Ga0207909_1067924	Not Available	526	Open in IMG/M
3300021141\|Ga0214163_1033078	Not Available	1455	Open in IMG/M
3300021438\|Ga0213920_1096220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	566	Open in IMG/M
3300021519\|Ga0194048_10073072	Not Available	1347	Open in IMG/M
3300021602\|Ga0194060_10207010	Not Available	1006	Open in IMG/M
3300021962\|Ga0222713_10005856	All Organisms → cellular organisms → Bacteria	11838	Open in IMG/M
3300021963\|Ga0222712_10149143	Not Available	1580	Open in IMG/M
3300021963\|Ga0222712_10149240	Not Available	1579	Open in IMG/M
3300023174\|Ga0214921_10004895	Not Available	19310	Open in IMG/M
3300023174\|Ga0214921_10005138	Not Available	18694	Open in IMG/M
3300023174\|Ga0214921_10387435	Not Available	721	Open in IMG/M
3300023184\|Ga0214919_10103247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2420	Open in IMG/M
3300024298\|Ga0255178_1093641	Not Available	555	Open in IMG/M
3300027129\|Ga0255067_1001796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3796	Open in IMG/M
3300027337\|Ga0255087_1029161	Not Available	1132	Open in IMG/M
3300027488\|Ga0255084_1026459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1109	Open in IMG/M
3300027586\|Ga0208966_1000739	Not Available	10274	Open in IMG/M
3300027659\|Ga0208975_1042881	Not Available	1409	Open in IMG/M
3300027697\|Ga0209033_1031799	Not Available	2025	Open in IMG/M
3300027697\|Ga0209033_1077071	Not Available	1132	Open in IMG/M
3300027710\|Ga0209599_10000189	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	43138	Open in IMG/M
3300027732\|Ga0209442_1096292	Not Available	1198	Open in IMG/M
3300027733\|Ga0209297_1025567	Not Available	2778	Open in IMG/M
3300027763\|Ga0209088_10418642	Not Available	513	Open in IMG/M
3300027769\|Ga0209770_10042419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1951	Open in IMG/M
3300027769\|Ga0209770_10284779	Not Available	633	Open in IMG/M
3300027797\|Ga0209107_10001826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	11902	Open in IMG/M
3300027797\|Ga0209107_10358040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	673	Open in IMG/M
3300027805\|Ga0209229_10018117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3020	Open in IMG/M
3300027805\|Ga0209229_10199736	Not Available	896	Open in IMG/M
3300027805\|Ga0209229_10388577	Not Available	607	Open in IMG/M
3300028025\|Ga0247723_1000074	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	58778	Open in IMG/M
3300028025\|Ga0247723_1012450	Not Available	3202	Open in IMG/M
3300028113\|Ga0255234_1080977	Not Available	857	Open in IMG/M
3300031758\|Ga0315907_10001059	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	37779	Open in IMG/M
3300031758\|Ga0315907_10128700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2156	Open in IMG/M
3300031758\|Ga0315907_10288040	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300031758\|Ga0315907_10502230	Not Available	959	Open in IMG/M
3300031784\|Ga0315899_10942483	Not Available	774	Open in IMG/M
3300031857\|Ga0315909_10013701	Not Available	8426	Open in IMG/M
3300031857\|Ga0315909_10183387	Not Available	1680	Open in IMG/M
3300031951\|Ga0315904_10142862	Not Available	2436	Open in IMG/M
3300031951\|Ga0315904_10706083	Not Available	847	Open in IMG/M
3300032050\|Ga0315906_10013746	Not Available	9284	Open in IMG/M
3300032050\|Ga0315906_10198836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1888	Open in IMG/M
3300032050\|Ga0315906_10379385	Not Available	1240	Open in IMG/M
3300032050\|Ga0315906_10743341	Not Available	779	Open in IMG/M
3300032050\|Ga0315906_10963596	Not Available	646	Open in IMG/M
3300032092\|Ga0315905_10668487	Not Available	927	Open in IMG/M
3300032093\|Ga0315902_11171204	Not Available	556	Open in IMG/M
3300032093\|Ga0315902_11337477	Not Available	502	Open in IMG/M
3300033557\|Ga0316617_101863102	Not Available	615	Open in IMG/M
3300033995\|Ga0335003_0138693	Not Available	1221	Open in IMG/M
3300034050\|Ga0335023_0222978	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300034064\|Ga0335001_0137912	Not Available	1384	Open in IMG/M
3300034071\|Ga0335028_0002972	Not Available	12165	Open in IMG/M
3300034102\|Ga0335029_0362771	Not Available	889	Open in IMG/M
3300034103\|Ga0335030_0357313	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300034103\|Ga0335030_0425987	Not Available	855	Open in IMG/M
3300034103\|Ga0335030_0823047	Not Available	542	Open in IMG/M
3300034107\|Ga0335037_0670423	Not Available	543	Open in IMG/M
3300034118\|Ga0335053_0291268	Not Available	1029	Open in IMG/M
3300034168\|Ga0335061_0272436	Not Available	888	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.83%
Terrestrial	Environmental → Terrestrial	4.17%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	89.88%
Marine	Environmental → Aquatic → Marine	5.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.98%
Soil	Environmental → Terrestrial → Soil	1.19%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	42.26%
Lentic	Environmental → Aquatic → Freshwater → Lentic	31.55%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	11.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.57%
River	Environmental → Aquatic → Freshwater → River	2.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.79%
Pond	Environmental → Aquatic → Freshwater → Pond	0.60%
Creek	Environmental → Aquatic → Freshwater → Creek	0.60%
Coastal	Environmental → Aquatic → Marine → Coastal	0.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.60%
Sand	Environmental → Terrestrial → Soil → Sand	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	41.67%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	23.81%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	11.90%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.98%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.38%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.60%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.60%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.60%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.60%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	17.86%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	17.26%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.90%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	11.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.76%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.57%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.98%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.98%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.38%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.38%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.79%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.79%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.19%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.19%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.19%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.60%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.60%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.60%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.60%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.60%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.60%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.60%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001274	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300002195	Freshwater microbial communities from San Paulo Zoo lake, Brazil - AUG 2013	Environmental	Open in IMG/M
3300002296	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008264	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTR	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010970	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1, april 2016	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020486	Freshwater microbial communities from Lake Mendota, WI - 20AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020572	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024298	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepC_8d	Environmental	Open in IMG/M
3300027129	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h	Environmental	Open in IMG/M
3300027337	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8d	Environmental	Open in IMG/M
3300027488	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8d	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028113	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_1000098017	3300000756	Freshwater And Sediment	MANMTVLEGIIDDVATELYQKLWNAIPVEEQTEDSSKAIGLNSRETTIFVIQSFMNKFNAAAEDLKDK*
JGI12421J11937_100028116	3300000756	Freshwater And Sediment	LDKQTTILEGIIEEIAVELYQKLWNAIPAEEQTEDSSRAIGLNSRETTIFVIQNFMNKFNAAADELKDQEEVLTPETHIVK*
B570J13895_10261331	3300001274	Freshwater	KMTVLEGIIEDISLELYQKLWNALPQEDQTEESSRAVGINSKETTLFVIQRFMDKFNAAAEALKNDSN*
metazooDRAFT_12277171	3300002195	Lake	MDKQMTVLEGIIEDIAVELYQKLWNAIPVEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKGQEEVLTPEPHIVK*
B570J29587_10047342	3300002296	Freshwater	MANMTVLEGIIEDVAVELYQKLWNAIPAEEQTEEASKAIGLNSRETTLYVIQNFMNKFNAAAEALKDS*
B570J40625_1002379183	3300002835	Freshwater	MADRKMTVLEGIIEDISLELYQKLWNALPQEDQTEESSRAVGINSKETTLFVIQRFMDKFNAAAEALKNDSN*
JGI25908J49247_101679142	3300003277	Freshwater Lake	MPNDKQTVLEGIVEDVGVELYQKVWNAISKEDQTEESSKALAINSRDTAVFVIQRFMDKFNDAAEELKDK*
Ga0066177_105591682	3300004096	Freshwater Lake	MTVLEGIVEEVSQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK*
Ga0065166_100822402	3300004112	Freshwater Lake	MADRKMTVLEGIIEDVSLELYQKLWNAIPSEEQNEDSSKAIGLNSKETTLFVIQRFMDKFNAAAEELKDQPDEQ*
Ga0065166_101363511	3300004112	Freshwater Lake	MGNQQTVLEGIIEDVATELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSV
Ga0065166_102607252	3300004112	Freshwater Lake	MTVLEGIIEDIAVELYQKLWNAIPVEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKSQEEVLTPEPHIVK*
Ga0007787_100885582	3300004240	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNALPVEDQTEESSRAVGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0007787_101681472	3300004240	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNAIPPEDQTEESSRAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0007787_105965851	3300004240	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0068876_100420994	3300005527	Freshwater Lake	MVRQKGKVSMANMTVLEGIIEDVSTELYQKLWNAIPIEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK*
Ga0068876_100661184	3300005527	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNEAAEALKNEPSVD*
Ga0068876_101655142	3300005527	Freshwater Lake	MAEKQMTVLEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAAEELKAQPDEQ*
Ga0068876_102569981	3300005527	Freshwater Lake	LEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAADELKAQPDEQ*
Ga0068872_100130385	3300005528	Freshwater Lake	MANMTVLEGIIEDVSTELYQKLWNAIPIEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK*
Ga0068872_102559831	3300005528	Freshwater Lake	MTVLEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAAEELKAQPDEQ*
Ga0068872_103002202	3300005528	Freshwater Lake	MTKQVTVLEGIIEDVASELYQKLWNAIPADEQTEDSSRAIGLNSKETTLFVIQRFMDKFNAAAEELKDK*
Ga0049081_100511441	3300005581	Freshwater Lentic	LDKQTTILEGIIEDIAVELYQKLWNAIPAEEQTEDSSRAIGLNSRETTIFVIQNFMNKFNAAADELKDQEEVLTPE
Ga0049081_100700391	3300005581	Freshwater Lentic	MSNQQTVLEGIIEDVAVELYQKLWNAIPAKDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0049082_100159072	3300005584	Freshwater Lentic	MPNDKQTVLEGIVEDVGIELYQKVWNAISKEDQTEESSKALAINSRDTAVFVIQRFMDKFNDAAEELKDK*
Ga0049082_100376351	3300005584	Freshwater Lentic	GIVEDVGIELYQKVWNAISKEDQTEESSKALAINSRDTAVFVIQRFMDKFNDAAEELKDK
Ga0078894_100856245	3300005662	Freshwater Lake	MDKQMTVLEGIIEDIAVELYQKLWNAIPVEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKSQEEVLTPEPHIVK*
Ga0078894_102238281	3300005662	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNAIPVEDQTEESSRAIGLNSKETTLFVIQRFMDKFNAAAEELKNEPSVD*
Ga0078894_104054791	3300005662	Freshwater Lake	MAEKQMTVLEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAAEELKAQPNEQ*
Ga0078894_104111132	3300005662	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNALPVEDQTEESSRAVGLNSKETTLFVIQRFMDKFNAAAEALK
Ga0078894_104128301	3300005662	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQRLWNAIPAEDQTEESSKAIGLNSRETTLFVIQRFMDKFNAAAEELKNEPSVD*
Ga0078894_105492872	3300005662	Freshwater Lake	MGNQQTVLEGIIEDVATELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0078894_108319943	3300005662	Freshwater Lake	DVSLELYQKLWNAIPSDEQNEDSSKAIGLNSKETTLFVIQRFMDKFNAAAEELKAQPEEQ
Ga0079957_11079843	3300005805	Lake	MNNQQTVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0073913_100114832	3300005940	Sand	MPNDKQTVLEGIVEDIGIELYQKVWNAIPKEDQTEESSKAIGINSRDTAIFVIQRFMDKFNAAAEELKDK*
Ga0070743_102732482	3300005941	Estuarine	DVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD
Ga0070744_100034444	3300006484	Estuarine	MADRKMTVLEGIIEDVSLELYQKLWNAIPSDEQNEDSSKAIGLNSKETTLFVIQRFMDKFNAAAEELKAQPEEQ*
Ga0102859_11731612	3300007708	Estuarine	MTVLEGIVEEVSQELYQKLWNAIPAEEQTEDSSKAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK*
Ga0105736_11556262	3300007861	Estuary Water	IVEEVSQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK*
Ga0114340_100329913	3300008107	Freshwater, Plankton	MANMTVLEGIIEDVATELYQKWYNAIAIEDRTEEYSKALGLNAHETTFFVIQSFMNKFNEAAEELKDK*
Ga0114340_100379011	3300008107	Freshwater, Plankton	LASEVTVLDGIIEDVSIELYQKLWNAIPVEEQNEESSRAIGLNSKETTLFVIQRFMDKFNAAAEELKDK*
Ga0114340_100583414	3300008107	Freshwater, Plankton	MTKQVTVLEGIIEDIAVELYQKLWNAIPAEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKGQEEVLTPETHIVK*
Ga0114340_10145747	3300008107	Freshwater, Plankton	LAREVTVLDGIIEDVSVELYQKLWNAIPVEEQTEDSSRAIGLNSKETTLFVIQRFMDKFNEAAEELKDK*
Ga0114340_10185418	3300008107	Freshwater, Plankton	MDKQMTVLEGIIEDIAVELYQKLWNAIPAEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAADELKGQEEVLTPEPHIVK*
Ga0114340_10254065	3300008107	Freshwater, Plankton	MGSQQTILESIIEDVAIELYQKLWNAIPAEDQTEESSRAIGLNSKETTLFVIQRFMDKFNAAAEELKNEPSVD*
Ga0114340_10319083	3300008107	Freshwater, Plankton	MANKQLTVLESIIEEVSLELYQKLWNAIPAEDQTEDSSRAVGLNSKETTLFVIQRFMDKFNAAAEELKDQPDEQ*
Ga0114340_11161245	3300008107	Freshwater, Plankton	MAEKQMTVLEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAADELKAQPDEQ*
Ga0114340_11972972	3300008107	Freshwater, Plankton	MDKQMTVLEGIIEDIAVELYQKLWNAIPAEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKSQEEVLTPEPHIVK*
Ga0114340_11996992	3300008107	Freshwater, Plankton	MTVLEGIVEEVAAELYQKLWNAIPAEEQTEESSKAIGLNSKETTLFVIQKFMDKFNAAAEELKDQ
Ga0114340_11999822	3300008107	Freshwater, Plankton	LGKEMTVLEGIIEDVATELYQKLWNAIPVEEQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEELKDK*
Ga0114341_100776435	3300008108	Freshwater, Plankton	MAEKQMTVLEAIIEEVSLELYQKLWNAIPSEDQTEESSRAVGLNSKETTLFVIQRFMDKFNAAAEELKSQPDEQ*
Ga0114341_103265463	3300008108	Freshwater, Plankton	LYQKLWNAIPVEEQTEDSSRAIGLNSKETTLFVIQRFMDKFNEAAEELKDK*
Ga0114343_100169418	3300008110	Freshwater, Plankton	MANMTVLEGIIEDVATELYQKWYNAIAIEDRTEESSKALGLNAHETTFFVIQSFMNKFNEAAEELKDK*
Ga0114343_100664117	3300008110	Freshwater, Plankton	LLXXXXXXQVTVLEGIIEDIAVELYQKLWNAIPAEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKGQEEVLTPETHIVK*
Ga0114343_10129627	3300008110	Freshwater, Plankton	LAREVTVLDGIIEDVSIELYQKLWNAIPVEEQNEESSRAIGLNSKETTLFVIQRFMDKFNAAAEELKDK*
Ga0114343_10655664	3300008110	Freshwater, Plankton	MEKQMTVLEGIIEDIAVELYQKLWNAIPVEEQTEDSSKAIGLNSRETTIFVIQNFMNKFNAAAEELKDK*
Ga0114343_12082142	3300008110	Freshwater, Plankton	MTVLEGIVEEVAAELYQKLWNAIPAEEQTEESSKAIGLNSKETTLFVIQKFMDKFNAAAEELKDQPDEQ*
Ga0114346_100208013	3300008113	Freshwater, Plankton	MEKQMTVLEGIIEDIAVELYQKLWNAIPIEEQTEDSSKAIGLNSRETTIFVIQNFMNKFNAAAEELKDK*
Ga0114347_100578115	3300008114	Freshwater, Plankton	MVRQKGKVSMANMTVLEGIIEDVSTELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK*
Ga0114347_11391473	3300008114	Freshwater, Plankton	QMTVLEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAAEELKAQPDEQ*
Ga0114347_11676762	3300008114	Freshwater, Plankton	MANMTVLEGIIEDVAVELYQKLWNAIPADEQTEEASKAIGLNARETTLYVIQNFMNKFNAAAEALKDS*
Ga0114354_12106051	3300008119	Freshwater, Plankton	KLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAADELKAQPDEQ*
Ga0114355_10361983	3300008120	Freshwater, Plankton	MTNDKQTILEGIVEDIGIELYQKVWNAIPKEDQTEESSKAIGINSRDTAIFVIQRFMDKFNAAADELKDK*
Ga0114355_12012851	3300008120	Freshwater, Plankton	VLEGIIEDVSTELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK*
Ga0114840_10063771	3300008258	Freshwater, Plankton	MGNQQTVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNE
Ga0114840_10268603	3300008258	Freshwater, Plankton	GIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAADELKAQPDEQ*
Ga0114353_11155502	3300008264	Freshwater, Plankton	MAEKQMTVLEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAAEELKSQPDEQ*
Ga0114363_100802510	3300008266	Freshwater, Plankton	MANMTVLEGIIEDVSTELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK*
Ga0104242_10765661	3300008962	Freshwater	MSNQQTVLEGIIEDVAVELYQRLWNAIPAEDQTEESSKAIGLNSRETTLFVIQRFMDKFNAAAEELKNEQK
Ga0102860_12394742	3300009056	Estuarine	MTVLEGIVEEVAAELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK*
Ga0102830_10803031	3300009059	Estuarine	IEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0114977_100128764	3300009158	Freshwater Lake	MDKVTVLEGIIDDVATELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNDAAEDLKDK*
Ga0114975_107177051	3300009164	Freshwater Lake	QKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNDAAEDLKDK*
Ga0114974_104623832	3300009183	Freshwater Lake	MTNDKQTVLEGIVEDIGIELYQKVWNAIPKEDQTEESSKAIGINSRDTAIFVIQRFMDKFNAAADELKDK*
Ga0114983_11118531	3300009194	Deep Subsurface	IELYQKLWNAIPAEEQNEESSKAIGLNSKETTLFIIQRFMDKFNAAAEELKDK*
Ga0114982_100055822	3300009419	Deep Subsurface	MANNQVTVLEGIIEDISIELYQKLWNAIPAEEQNEESSKAIGLNSKETTLFIIQRFMDKFNAAAEELKDK*
Ga0137575_100004334	3300010970	Pond Fresh Water	MANMTVLEGIIEDVSVELYQKLWNAIPVEEQTEDSSKAIGLNSRETTLFVIQSFMNKFNAAAEELKDK*
Ga0164293_100401172	3300013004	Freshwater	LAREVTVLDGIIEDVSIELYQKLWNAIPAEEQNEESSRAIGLNSKETTLFVIQRFMDKFNAAAEELKDK*
Ga0164293_100975233	3300013004	Freshwater	MTVLEGIVEEVSQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPETHIVK*
Ga0164293_102299822	3300013004	Freshwater	MTNKQVTVLEGIIEDISVELYQKLWNAIPAEEQNEESSKAIGLNSKETTLFIIQRFMDKFNAAAEELKDK*
Ga0164293_107531872	3300013004	Freshwater	MANMTVLEGIIEDISVELYQKLWNAIPVEEQTEESSRAIGLNARETTLFVIQNFMTKFNDAAEELKDK*
(restricted) Ga0172373_100134755	3300013131	Freshwater	MANLTILESIVEEVAVELYQKLWNALPADQQNDETSAAVGKNARETTIFVIQNFMNKFNQAAEELKGE*
Ga0177922_112282762	3300013372	Freshwater	MNNQQTVLEGIIEDVAVELYQKLWNAIPAKDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD*
Ga0119952_10428211	3300014050	Freshwater	MGNQQTVLEGIIEDVAVELYQRLWNAIPAEDQTEESSKAIGLNSRETTLFVIQRFMDKFNAAAEELKNEPSID*
Ga0181343_10896302	3300017766	Freshwater Lake	MDKQMTVLEGIIEDIAVELYQKLWNAIPVEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKSQEEVLTPEPHIVK
Ga0181358_100441617	3300017774	Freshwater Lake	ELYQKVWNAISKEDQTEESSKALAINSRDTAVFVIQRFMDKFNDAAEELKDK
Ga0181358_100620011	3300017774	Freshwater Lake	LANMTVLEGIVEEVSQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0207193_11069064	3300020048	Freshwater Lake Sediment	MADRKMTVLEGIIEDVSLELYQKLWNAIPSDEQNEDSSKAIGLNSKETTLFVIQRFMDKFNAAAEELKAQPEEQ
Ga0211732_14727852	3300020141	Freshwater	MASMTVLEEIVEEVSAELYQKLWNAIPVEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDK
Ga0211736_100174564	3300020151	Freshwater	MPNDKQTVLEGIVEDIGIELYQKVWNAIPKEDQTEESSKAIGINSRDTAIFVIQRFMDKFNAAAEELKDK
Ga0211736_103295069	3300020151	Freshwater	MANMTVLEGIVEDISTELYQKLWNAIPVEEQTEESSKAIGLNARETTLFVIQNFMNKFNDAAEELKDK
Ga0211736_107197912	3300020151	Freshwater	MTVLEGIIEDVATELYQKLWNAIPAEEQTEDASKAIGLNSRETTIYVIQNFMNKFNAAAEELKDN
Ga0211736_109844923	3300020151	Freshwater	MTVLEEIVEQVAQELYQKLWNAIPPEEQTEDSSKAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0211734_105118352	3300020159	Freshwater	MTVLEEIVEQVAQELYQKLWNAIPPEEQTEDSSKAIGLNSRETTIFVIQNFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0211734_110385233	3300020159	Freshwater	MANNQVTILEGIIEDIGIELYQKVWNAIPKEDQTEESSKAIGINSRDTAIFVIQRFMDKFNAAAEELKDK
Ga0211726_107082055	3300020161	Freshwater	LANMTVLEEIVEQVAQELYQKLWNAIPPEEQTEDSSKAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPETHIVK
Ga0211729_1074175014	3300020172	Freshwater	MTVLEEIVEQVAQELYQKLWNAIPPEEQTEDSSKAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPETHIVK
Ga0211729_114237041	3300020172	Freshwater	PNDKQTVLEGIVEDIGIELYQKVWNAIPKEDQTEESSKAIGINSRDTAIFVIQRFMDKFNAAAEELKDK
Ga0208698_1114842	3300020486	Freshwater	MTNKQVTVLEGIIEDISVELYQKLWNAIPAEEQNEESSKAIGLNSKETTLFIIQRFMDKFNAAAEELKDK
Ga0208091_10030122	3300020506	Freshwater	MANMTVLEGIIEDVAVELYQKLWNAIPAEEQTEEASKAIGLNSRETTLYVIQNFMNKFNAAAEALKDS
Ga0208232_10297392	3300020527	Freshwater	MADRKMTVLEGIIEDVSLELYQKLWNALPQEDQTEESSRAVGINSKETTLFVIQRFMDKFNAAAEALKNDSN
Ga0207909_10227681	3300020572	Freshwater	LDKQTTILEGIIEEIAVELYQKLWNAIPAEEQTEDSSRAIGLNSRETTIFVIQNFMNKFNAAADELKDQEEVLTPETHIVK
Ga0207909_10679241	3300020572	Freshwater	MTVLEGIVEEVSQELYQKLWNAIPAEEQTEDSSKAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0214163_10330784	3300021141	Freshwater	RKMTVLEGIIEDISLELYQKLWNALPQEDQTEESSRAVGINSKETTLFVIQRFMDKFNAAAEALKNDSN
Ga0213920_10962202	3300021438	Freshwater	MANMTVLEGIIEDVATELYQKWYNAIAIEDRTEESSKALGLNAHETTFFVIQSFMNKFNEAAEELKDK
Ga0194048_100730722	3300021519	Anoxic Zone Freshwater	MANMTVLESIVEEVAQELYQKLWNAIPLEEQTEDSSRAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0194060_102070102	3300021602	Anoxic Zone Freshwater	MANMTVLESIVEEVSQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0222713_1000585615	3300021962	Estuarine Water	MGNQQTVLEGIIEDVAVELYQRLWNAIPAEDQTEESSKAIGLNSRETTLFVIQRFMDKFNAAAEELKNEPSVD
Ga0222712_100500418	3300021963	Estuarine Water	KVWNAIPKEDQTEESSKAIGINSRDTAIFVIQRFMDKFNAAADELKDK
Ga0222712_101491435	3300021963	Estuarine Water	MADMTVLEGIIEDVATELYQKLWNAIPAEEQTEEASKAIGLNARETTLYVIQNFMNKFNAAAEALKDS
Ga0222712_101492404	3300021963	Estuarine Water	MAEKQMTVLEGIIEEVSLELYQKLWNALPLEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAAEELKAQPDEQ
Ga0214921_1000489524	3300023174	Freshwater	MANMTVLESIVEEVAQELYQKLWNAIPSEEQTEDSSKAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0214921_1000513827	3300023174	Freshwater	MANMTVLEEIIEEVSQELYQKLWNAIPVEEQTEDSSKAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPKPHIVK
Ga0214921_103874352	3300023174	Freshwater	MANMTVLESIVEEVAQELYQKLWNAIPSEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0214919_101032475	3300023184	Freshwater	MANMTVLEEIVEEVSQELYQKLWNAIPVEEQTEDSSKAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0255178_10936411	3300024298	Freshwater	EEVAVELYQKLWNALPADQQNDEVSAAVGKNARETTIFVIQNFMNKFNEAAEELKDK
Ga0255067_10017961	3300027129	Freshwater	MGNQQTVLEGIIEDVATELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD
Ga0255087_10291614	3300027337	Freshwater	TVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD
Ga0255084_10264592	3300027488	Freshwater	MGNQQTVLEGIIEDVAIELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAE
Ga0208966_100073918	3300027586	Freshwater Lentic	MPNDKQTVLEGIVEDVGIELYQKVWNAISKEDQTEESSKALAINSRDTAVFVIQRFMDKFNDAAEELKDK
Ga0208975_10428811	3300027659	Freshwater Lentic	MSNQQTVLEGIIEDVAVELYQKLWNAIPAKDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD
Ga0209033_10317992	3300027697	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNALPVEDQTEESSRAVGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD
Ga0209033_10770711	3300027697	Freshwater Lake	MGNQQTVLEGIIEDVAVELYQKLWNAIPPEDQTEESSRAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD
Ga0209599_1000018922	3300027710	Deep Subsurface	MANNQVTVLEGIIEDISIELYQKLWNAIPAEEQNEESSKAIGLNSKETTLFIIQRFMDKFNAAAEELKDK
Ga0209442_10962922	3300027732	Freshwater Lake	MPNDKQTVLEGIVEDVGVELYQKVWNAISKEDQTEESSKALAINSRDTAVFVIQRFMDKFNDAAEELKDK
Ga0209297_10255674	3300027733	Freshwater Lake	MDKVTVLEGIIDDVATELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNDAAEDLKDK
Ga0209088_104186421	3300027763	Freshwater Lake	MTVLEGIVEEVSQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQTFMNKFNAAAEEL
Ga0209770_100424193	3300027769	Freshwater Lake	MTVLEGIIEDVSLELYQKLWNAIPSEEQNEDSSKAIGLNSKETTLFVIQRFMDKFNAAAEELKDQPDEQ
Ga0209770_102847792	3300027769	Freshwater Lake	MADRKMTVLEGIIEDISLELYQKLWNALPQEDQTEESSRAVGINSKETTLFVIQRFMDKFNAAAEALKNDSN
Ga0209107_1000182618	3300027797	Freshwater And Sediment	MANMTVLEGIIDDVATELYQKLWNAIPVEEQTEDSSKAIGLNSRETTIFVIQSFMNKFNAAAEDLKDK
Ga0209107_103580401	3300027797	Freshwater And Sediment	MDKMTVLEGIIDDVATELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNDAAEDLKDK
Ga0209229_100181178	3300027805	Freshwater And Sediment	MAERQMTVLEGIIEDVAMELYQKLWNAIPAEEQTEDSSRAVGINSKETTLFVVQRFMDKFNAAAEELKDK
Ga0209229_101997362	3300027805	Freshwater And Sediment	MTKQVTVLEGIIEDIAVELYQKLWNAIPAEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAAEELKGQEEVLTPETHIVK
Ga0209229_103885771	3300027805	Freshwater And Sediment	MAEKQMTVLEGIIEDVALELYQKLWNAIPAEEQNEDSSRAIGLNSKETTLFVIQRFMDKFNAAAEELK
Ga0247723_100007454	3300028025	Deep Subsurface Sediment	MTVLEGIVEEVAAELYQKLWNAIPAEEQTEESSKAIGLNSKETTLFVIQKFMDKFNAAAEELKDQPDEQ
Ga0247723_10124504	3300028025	Deep Subsurface Sediment	LAREVTVLDGIIEDVSVELYQKLWNAIPVEEQTEDSSRAIGLNSKETTLFVIQRFMDKFNEAAEELKDK
Ga0255234_10809772	3300028113	Freshwater	MGNQQTVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEVLKNEPSVD
Ga0315907_1000105915	3300031758	Freshwater	MTKQVTVLEGIIEDVASELYQKLWNAIPADEQTEDSSRAIGLNSKETTLFVIQRFMDKFNAAAEELKDK
Ga0315907_101287005	3300031758	Freshwater	MAEKQMTVLEAIIEEVSLELYQKLWNAIPSEDQTEESSRAVGLNSKETTLFVIQRFMDKFNAAAEELKSQPDEQ
Ga0315907_102880403	3300031758	Freshwater	MGNQQTVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNEAAEALKNEPSVD
Ga0315907_104515341	3300031758	Freshwater	YQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK
Ga0315907_105022302	3300031758	Freshwater	MVRQKGKVSMANMTVLEGIIEDVSTELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK
Ga0315899_109424833	3300031784	Freshwater	MTVLEGIIEDVATELYQKWYNAIAIEDRTEEYSKALGLNAHETTFFVIQSFMNKFNEAAEELKDK
Ga0315909_1001370118	3300031857	Freshwater	MANMTVLEGIIEDVAVELYQKLWNAIPADEQTEEASKAIGLNARETTLYVIQNFMNKFNAAAEALKDS
Ga0315909_101833875	3300031857	Freshwater	MANMTVLEGIIEDVATELYQKLWNAIPAEEQTEEASKAIGLNARETTLYVVQNFMNKFNAAAEALKDS
Ga0315909_104171451	3300031857	Freshwater	ISIELYQKLWNAIPVEEQTEESSKAIGLNARETTLFVIQNFMNKFNDAAEDLKDK
Ga0315904_101428624	3300031951	Freshwater	MAEKQMTVLEGIIEEVSLELYQKLWNALPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAADELKAQPDEQ
Ga0315904_107060832	3300031951	Freshwater	MTVLEGIIEDVAVELYQKLWNAIPADEQTEEASKAIGLNARETTLYVIQNFMNKFNAAAEALKDS
Ga0315901_106579403	3300031963	Freshwater	VELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEALKNEPSVD
Ga0315906_1001374618	3300032050	Freshwater	MTVLEAIIEEVSLELYQKLWNAIPSEDQTEESSRAVGLNSKETTLFVIQRFMDKFNAAAEELKSQPDEQ
Ga0315906_101988365	3300032050	Freshwater	MTVLEGIIEDVSTELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEEL
Ga0315906_103793851	3300032050	Freshwater	MANMTVLEGIIEDVAVELYQKLWNAIPAEEQTEEASKAIGLNARETTLYVIQNFMNKFNAAAEALKDS
Ga0315906_107433414	3300032050	Freshwater	VLEGIIEDVSTELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK
Ga0315906_109635961	3300032050	Freshwater	TVLEGIIEDVSTELYQKLWNAIPVEEQTEDSSRAIGLNSRETTIFVIQSFMNKFNAAAEELKDK
Ga0315905_106684872	3300032092	Freshwater	MAEKQMTVLEAIIEEVSLELYQKLWNAIPSEDQTEESSKAVGLNSKETTLFVIQRFMDKFNAAAEELKAQPDEQ
Ga0315902_111712042	3300032093	Freshwater	MADRKMTVLEGIIEDVSLELYQKLWNAIPSEEQNEDSSKAIGLNSKETTLFVIQRFMDKFNAAAEELKDQPDEQ
Ga0315902_113374772	3300032093	Freshwater	MTVLEGIIEDIAVELYQKLWNAIPVEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAADELKGQEEVLTPEPHIVK
Ga0316617_1018631021	3300033557	Soil	MDRQVTVLEGIIEDVAVELYQKLWNAIPAEDQTEESSKAIGLNSKETTLFVIQRFMDKFNAAAEELKNEPSVD
Ga0335003_0138693_27_272	3300033995	Freshwater	LDKQTTILEGIIEEIAVELYQKLWNAIPAEEQTEDSSRAIGLNSRETTIFVIQNFMNKFNAAADELKDQEEVLTPEPHIVK
Ga0335023_0222978_826_1047	3300034050	Freshwater	EGIVEEVAQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPEVHIVK
Ga0335001_0137912_591_824	3300034064	Freshwater	MTVLEEIVEEVAQELYQKLWNAIPAEEQTEDSSRAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPEVHIVK
Ga0335028_0002972_3184_3417	3300034071	Freshwater	MTVLESIIEEVAQELYQKLWNAIPPQEQTEDSSRAIGLNSRETTLFVIQNFMNKFNAAAEELKDQEEVLTPEPHIVK
Ga0335029_0362771_74_319	3300034102	Freshwater	LDKQTTILEGIIEEIAVELYQKLWNAIPAEEQTEDSSRAIGLNSRETTIFVIQNFMNKFNAAADELRDQEEVLTPETHIVK
Ga0335030_0357313_2_175	3300034103	Freshwater	EDISIELYQKLWNAIPAEEQNEESSKAIGLNSKETTLFIIQRFMDKFNAAAEELKDK
Ga0335030_0425987_668_853	3300034103	Freshwater	MANNQVTVLEGIIEDISIELYQKLWNAIPAEEQNEESSKAIGLNSKETTLFIIQRFMDKFNA
Ga0335030_0823047_196_402	3300034103	Freshwater	MANMTVLEGIVKEVSSELYQKWYNAIPNEEKNEKSSEALMKNAGETTFFVIQAFMNKFNEAAEELKDK
Ga0335037_0670423_93_338	3300034107	Freshwater	LDKQTTILEGIIEEIAVELYQKLWNAIPAEEQTEDSSRAIGLNSRETTIFVIQNFMNKFNAAADELKDQEGVLTPETHIVK
Ga0335053_0291268_617_862	3300034118	Freshwater	LDKQTTILEGIIEDIAVELYQKLWNAIPVEEQTEDSSRAIGLNARETTIFVIQNFMNKFNAAADELKDQEKVLTPEPHIVK
Ga0335061_0272436_456_689	3300034168	Freshwater	MTVLEGIVEEVSQELYQKLWNAIPAEEQTEDSSKAIGLNSRETTLFVIQTFMNKFNAAAEELKDQEEVLTPETHIVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters