NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F036949

Metagenome / Metatranscriptome Family F036949

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F036949
Family Type Metagenome / Metatranscriptome
Number of Sequences 169
Average Sequence Length 84 residues
Representative Sequence VVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Number of Associated Samples 149
Number of Associated Scaffolds 169

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.31 %
% of genes near scaffold ends (potentially truncated) 47.34 %
% of genes from short scaffolds (< 2000 bps) 57.40 %
Associated GOLD sequencing projects 136
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (56.213 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.976 % of family members)
Environment Ontology (ENVO) Unclassified
(27.219 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.645 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.14%    β-sheet: 0.00%    Coil/Unstructured: 56.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 169 Family Scaffolds
PF03631Virul_fac_BrkB 53.85
PF06925MGDG_synth 1.78
PF01510Amidase_2 1.78
PF01979Amidohydro_1 0.59

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 169 Family Scaffolds
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 53.85
COG0707UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferaseCell wall/membrane/envelope biogenesis [M] 1.78


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.21 %
UnclassifiedrootN/A43.79 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001904|JGI24736J21556_1034183All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium785Open in IMG/M
3300002568|C688J35102_119690426All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300004479|Ga0062595_101841622Not Available577Open in IMG/M
3300004643|Ga0062591_100540347All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1013Open in IMG/M
3300005162|Ga0066814_10028931All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005293|Ga0065715_11179459Not Available502Open in IMG/M
3300005295|Ga0065707_10167545All Organisms → cellular organisms → Bacteria1510Open in IMG/M
3300005332|Ga0066388_106215506All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium603Open in IMG/M
3300005341|Ga0070691_10925898All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium539Open in IMG/M
3300005356|Ga0070674_100573871All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium949Open in IMG/M
3300005364|Ga0070673_101904718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UNC280MFTsu5.1564Open in IMG/M
3300005444|Ga0070694_100034813All Organisms → cellular organisms → Bacteria3324Open in IMG/M
3300005454|Ga0066687_10158776All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300005457|Ga0070662_100526783All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium988Open in IMG/M
3300005543|Ga0070672_102153020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300005556|Ga0066707_10149824All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300005564|Ga0070664_101981658All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium553Open in IMG/M
3300005618|Ga0068864_101382858All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium705Open in IMG/M
3300005764|Ga0066903_106776585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. X1(2014)595Open in IMG/M
3300005842|Ga0068858_100794959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium923Open in IMG/M
3300006175|Ga0070712_101911282All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300006573|Ga0074055_11840142Not Available594Open in IMG/M
3300006575|Ga0074053_11904816All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300006791|Ga0066653_10514617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium606Open in IMG/M
3300006806|Ga0079220_10281470All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1016Open in IMG/M
3300006847|Ga0075431_101847701All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium560Open in IMG/M
3300009092|Ga0105250_10174097All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium902Open in IMG/M
3300009094|Ga0111539_10230036All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2159Open in IMG/M
3300009147|Ga0114129_11775471All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium751Open in IMG/M
3300009177|Ga0105248_10429383All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300010043|Ga0126380_11383748All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300010358|Ga0126370_11049247Not Available748Open in IMG/M
3300010360|Ga0126372_10210814All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300010361|Ga0126378_11235512All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium844Open in IMG/M
3300010361|Ga0126378_11914437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium675Open in IMG/M
3300010371|Ga0134125_12667585All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium543Open in IMG/M
3300010373|Ga0134128_10873304All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium996Open in IMG/M
3300010376|Ga0126381_104507312Not Available538Open in IMG/M
3300012895|Ga0157309_10280403Not Available555Open in IMG/M
3300012951|Ga0164300_10186183All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1005Open in IMG/M
3300012988|Ga0164306_11117025All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium656Open in IMG/M
3300012989|Ga0164305_10420408All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1029Open in IMG/M
3300014325|Ga0163163_10862170All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium969Open in IMG/M
3300014969|Ga0157376_10922476All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium892Open in IMG/M
3300015261|Ga0182006_1161558All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300015371|Ga0132258_12021744All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1449Open in IMG/M
3300015373|Ga0132257_100446138All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1580Open in IMG/M
3300015373|Ga0132257_101484886All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium865Open in IMG/M
3300015373|Ga0132257_102494856All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300015373|Ga0132257_103304134All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium587Open in IMG/M
3300015373|Ga0132257_103585405All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium565Open in IMG/M
3300015374|Ga0132255_100368790All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2083Open in IMG/M
3300015374|Ga0132255_103093552All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium710Open in IMG/M
3300016270|Ga0182036_11293410All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium608Open in IMG/M
3300016319|Ga0182033_11248083All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium667Open in IMG/M
3300016357|Ga0182032_10304545All Organisms → cellular organisms → Bacteria1260Open in IMG/M
3300018073|Ga0184624_10115553All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1159Open in IMG/M
3300018078|Ga0184612_10111012All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300018081|Ga0184625_10445628All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium664Open in IMG/M
3300019789|Ga0137408_1157106All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1815Open in IMG/M
3300019877|Ga0193722_1002083All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus4791Open in IMG/M
3300019883|Ga0193725_1122140All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium592Open in IMG/M
3300019886|Ga0193727_1024823All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2103Open in IMG/M
3300020006|Ga0193735_1029529All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1678Open in IMG/M
3300020059|Ga0193745_1070394All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium763Open in IMG/M
3300021073|Ga0210378_10066870All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300022756|Ga0222622_10965929All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium625Open in IMG/M
3300024181|Ga0247693_1066558All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium535Open in IMG/M
3300025910|Ga0207684_10577959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium960Open in IMG/M
3300025915|Ga0207693_10682251All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300025922|Ga0207646_11490715All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium586Open in IMG/M
3300025926|Ga0207659_10333533All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1255Open in IMG/M
3300025930|Ga0207701_11236046All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium614Open in IMG/M
3300025935|Ga0207709_10703581All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium809Open in IMG/M
3300025937|Ga0207669_11016284All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium697Open in IMG/M
3300026035|Ga0207703_10491737All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1151Open in IMG/M
3300026305|Ga0209688_1011693All Organisms → cellular organisms → Bacteria1661Open in IMG/M
3300026555|Ga0179593_1058139All Organisms → cellular organisms → Bacteria3006Open in IMG/M
3300028717|Ga0307298_10081687All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium907Open in IMG/M
3300028718|Ga0307307_10180767All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium665Open in IMG/M
3300028768|Ga0307280_10223343All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium671Open in IMG/M
3300028771|Ga0307320_10121089All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1003Open in IMG/M
3300028784|Ga0307282_10299045All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium776Open in IMG/M
3300028787|Ga0307323_10117113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium958Open in IMG/M
3300028811|Ga0307292_10247914All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium739Open in IMG/M
3300028875|Ga0307289_10018343All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2693Open in IMG/M
3300030844|Ga0075377_10001591All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium635Open in IMG/M
3300030916|Ga0075386_10041862All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1017Open in IMG/M
3300031057|Ga0170834_104893223Not Available538Open in IMG/M
3300031184|Ga0307499_10309959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium523Open in IMG/M
3300031231|Ga0170824_110951052All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium786Open in IMG/M
3300031446|Ga0170820_14132316Not Available548Open in IMG/M
3300031446|Ga0170820_17842018All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1021Open in IMG/M
3300031469|Ga0170819_16801075All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1116Open in IMG/M
3300031890|Ga0306925_10422918All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300031908|Ga0310900_11352521All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium597Open in IMG/M
3300031945|Ga0310913_11080507All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium561Open in IMG/M
3300031945|Ga0310913_11175123All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium534Open in IMG/M
3300031947|Ga0310909_10885483All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium734Open in IMG/M
3300031947|Ga0310909_11367096All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300032012|Ga0310902_11183182All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium538Open in IMG/M
3300032017|Ga0310899_10036706All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1714Open in IMG/M
3300032075|Ga0310890_11618995Not Available536Open in IMG/M
3300034354|Ga0364943_0241558All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium673Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.73%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.55%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.37%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.37%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.78%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.78%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.78%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.18%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.18%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.18%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.59%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.59%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.59%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.59%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.59%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.59%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.59%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.59%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.59%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000651Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10EnvironmentalOpen in IMG/M
3300001904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2Host-AssociatedOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005266Switchgrass rhizosphere microbial communities from Rose Lake, Michigan, USA - BV2.2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024181Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030844Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AP72_2010_repI_A10DRAFT_100263213300000651Forest SoilGLGVSTFCADFDFELFFVLSTVLFALDVFFALFGFGVGVLRRFVFGVGDLFGCGLDAARDLVSLA*
JGI24736J21556_103418313300001904Corn RhizosphereTAIARGGDGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
JGI24036J26619_1005534713300002128Corn, Switchgrass And Miscanthus RhizosphereALASSTCGAGVFRGLGVSTFDADFDLELFFVLSTVFFAPDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARVSVSPA*
C688J35102_11969042613300002568SoilTASARSGDAVGSGAARSSSACGVGVLRGLGVSSFCAAFDFAFLFAPDFFFAAFGFGVGVWCRLAFGDGDFFSFGVDAERVSLSSD*
Ga0062595_10184162213300004479SoilTAIARGGGGVVSDAARASSTWDAGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAARVSDSSD*
Ga0062591_10054034723300004643SoilVRAGLVCGEGAGVGTAIARAGGATVSDAARASSTCGDGVFRGLGVSSFRADFEFELFFVSSDVFFAADFLFVVFGFGVGVWRRFVFGVGDFFGFGVDAALVWVSSD*
Ga0062591_10098579823300004643SoilVFRGLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASSD*
Ga0066814_1002893113300005162SoilETVRAGFGCGEGAGVATAIARGSGAAGSDAASSTCGVGVFRGLGVSLFWADFDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAERASVSSDWS*
Ga0066823_1008808713300005163SoilTCGVGVFRGLGVSSFRADFDFALDFVFAFFGFGVGVWCRFAFGVGDFFGFGVGAECASVSSD*
Ga0065702_10075713300005266Switchgrass RhizosphereGLGVSSFRADFDFFFAVFGFGVGVWRRFAFGAGDFFGFGVDAECAPVSSD*
Ga0065712_1028087323300005290Miscanthus RhizosphereAGSGAARASSTSVVGVFRGFGVSSFRADFDSALFFAPDFFFDVFGFGVGVRCRFDFGVGDFFGFGVDAERPSVSSD*
Ga0065715_1117945913300005293Miscanthus RhizosphereAGGAEVSDAACAFSTSGPGVFRGLGVSSSRADFDFSLFVVLPDFFLGVFGFGVGVWRRFAFGVGDFFGLGVDAECVSVSSD*
Ga0065707_1016754523300005295Switchgrass RhizosphereGTAIARGGVAAGSDAARSSFTCGAGVFRGLGVSSFRADFDFAPDFFFAVFGFGVGVWCRFVFGVGDFFGFGVDAARVSVSSD*
Ga0070670_10161647113300005331Switchgrass RhizosphereSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0066388_10621550613300005332Tropical Forest SoilPAAATVRAGFGCGEGVGVATAIARGSGGVVSDAVRSSSTCDAGVFRGLGVSSFCADFDFAFFFAPDFFVSGFGVGVWRRFVFGVGDFRGFGVDASRVSVSSD*
Ga0066388_10867786513300005332Tropical Forest SoilGAGVFRGLGVSSFCADFDFELFFVPDFVVFGFGVGVWRRFVFGVGDFFGFEVGAACVSVSSD*
Ga0068869_10190529813300005334Miscanthus RhizosphereGVSSFCADFDFALFFAPDFFFAAFGFGVGVWRRFVFGVGDFFGFGVAAARVSVSSD*
Ga0070660_10088908213300005339Corn RhizosphereSTCGAGVFRGLGVSTFDADFDLELFFVLSTVFFAPDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARVSVSPA*
Ga0070691_1092589823300005341Corn, Switchgrass And Miscanthus RhizosphereIARGGDGVVSDAARASSTCGAGVFRGLGVSSFRAEFDFAPDFFFVVFGFGVGVWRRFGFGVGDFFGFGVGAERASD*
Ga0070669_10096337123300005353Switchgrass RhizosphereSSTCGAGVFRGLGVSSFRADFDSALLFALSDVFSTPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDGARVSVSSD*
Ga0070674_10057387113300005356Miscanthus RhizosphereARGSGAAGSDAARTSSTCGVGVFRGLGVSSFRAEFDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDGARVSVSSD*
Ga0070673_10190471813300005364Switchgrass RhizosphereGCPLAGTARTGFGCGEGVGVATAIARGGDGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0070705_10016010613300005440Corn, Switchgrass And Miscanthus RhizosphereGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAARVSDSSD
Ga0070694_10003481343300005444Corn, Switchgrass And Miscanthus RhizosphereGTARTGFGCGEGVGVATAIARGGDGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0066687_1015877623300005454SoilCGEGAGVGTAIARGGGDEVSDAARAFSTCGAGVFRGLGVSSFRTDLDFALLFVLSDVFFAPDFFFGVFGFGVGLWRRFVFGVGDFFGFGVDAVRVSVSSD*
Ga0070662_10052678323300005457Corn RhizosphereGVGTAIARAGGAEVSDTACAFSTSGTGVFRGLGVSSSRADFDFSLFVVLPDFFLGVFGFGVGVWRRFAFGVGDFFGLGVDAECVSVSSV*
Ga0070672_10215302023300005543Miscanthus RhizosphereVGSDAARSSSACGVGVFRGLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASSD*
Ga0066707_1014982423300005556SoilRAGLGCGEGAGVGTAIARGCGAAVSDAARVSSTCGAGVFRGLGVSSFRADFGFALFFALSDVFFPPEFFFAGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0070664_10092546123300005564Corn RhizosphereVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0070664_10198165823300005564Corn RhizosphereVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFFFAVFGFGVGVWRRFVFGAGDFFGFGVDAARVSVSSD*
Ga0066705_1016830723300005569SoilGAGVFRGLGVSSVRADFDFALFFASSDVFFAGDFFFPVFGLGVGVWRRFVFGVGDFSGFGVDAARVSVSSD*
Ga0066691_1080531113300005586SoilICGAGVFRGLGVSSFSADFDFSLFVVLSDAFFAPVFFFAGFGVGVWRRFVFGVGDFFGFGVDAVRVSVSSD*
Ga0068852_10051771523300005616Corn RhizosphereAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0068864_10138285823300005618Switchgrass RhizosphereGVAVGSDAARSSSACGVGVFRGLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASSD*
Ga0066903_10677658513300005764Tropical Forest SoilMPDFSITTCACPRAALGCGEGVGVGTAIARGGSAGVSEAALASSTCGAGVFRGLGVSSSCADFDFELFFVLSTVLFALDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARVSVSPA*
Ga0068858_10079495913300005842Switchgrass RhizosphereGAARTGFSCGEGVGVGTAIARGGGGVVSDAARASSTWDAGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAARVSDSSD*
Ga0070717_1172803913300006028Corn, Switchgrass And Miscanthus RhizosphereVVSDAARASSTWDAGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAARVSDSSD*
Ga0070715_1042696413300006163Corn, Switchgrass And Miscanthus RhizosphereVVSDAARASSTWGAGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAARVSDSSD*
Ga0070712_10191128213300006175Corn, Switchgrass And Miscanthus RhizosphereLSCGEGAGVGTAIARGAGDEVSDAARAFSTCGAGVFRGLGVSSFRADLDFALLFVLSDVFFAPDFFFGVFGFGVGVWRRFVFGVGDFFGFGVDAVRVSVSSD*
Ga0074055_1184014213300006573SoilACPPAETVRAGFGCGEGAGVATAIARGSGAAGSDAASSTCGVGVFRGLGVSLFWADFDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAERASVSSDWS*
Ga0074053_1190481623300006575SoilGGGDGGGSNPWSSSMPDFSITTWACPPAETVRAGFGCGEGAGVATAIARGSGAAGSDAASSTCGVGVFRGPGVSLFWADFDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAERASVSSDWS*
Ga0066653_1051461713300006791SoilGLGCGEGAGVGSAIACGGGAAVSDAARASSTCGAGVFRGLGVSSFRADVDFALFFASSDVFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0079220_1028147023300006806Agricultural SoilACGEGVGVGAAIACGGGAEVSDAVLPSSACGAGVFRGLGVSSCCADFDFELFVVLSNAFFALDFCFALFGFGVGVSRRFVFVVGDFFRRGVDAARVSVCPA*
Ga0075431_10184770123300006847Populus RhizosphereAGVSEAALASSTCGAGVFRGLGVSTFDADFDLELFFVLSTVFFAPDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARVSVSPA*
Ga0068865_10082070223300006881Miscanthus RhizosphereGLGVSSFRAEFDFAPDFFFVIFGFGVGVWRRFAFGVGDFFGFGVDAECASLSSD*
Ga0068865_10116924413300006881Miscanthus RhizosphereVGSDAARSSSACGVGVFRGLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECA
Ga0075435_10124000613300007076Populus RhizosphereLGVSSFRADFDSLLLAVLSLGFFAPDFFFGVFGFGVGVWRRFVFGVGDFFGFGVDAVRVAVSSD*
Ga0105250_1017409723300009092Switchgrass RhizosphereGCPLAGTARTGFGCGEGVGVGVATAIARGGDGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0111539_1023003633300009094Populus RhizosphereLPAGPARAGLGCGEAAGVGTISARGGGAGVSDTARSSSACGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFCFAVCGFGVGVCRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0114129_1177547113300009147Populus RhizosphereMPDFSITTWACPPGVTARAGFGCDEGDGVGTAIARGGGAAVSDAARASSICGAGVFRGLGVSSFCADFDFALFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAGR
Ga0111538_1175618723300009156Populus RhizosphereDVARSSSTCVAGVFRGLGVSSFSADFDFALVFAADFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAERASVSSD*
Ga0105248_1042938313300009177Switchgrass RhizospherePAGAARTGFSCGEGVGVGTAIARGGGGVVSDAARASSTWDAGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRCFVFGVGDFLGFGVEAARVSDSSD*
Ga0126380_1138374813300010043Tropical Forest SoilTARGGGGVVSDAARSSTCDAGVLRGLGVSSFFADFDFAFFFAPDFFVSGFGVGVWRRFVFGVGDFRGFGVAASRVSVSSD*
Ga0127503_1004114723300010154SoilVSSFCADFDSALFFAPDFFFDVFGFGVGVWRRFAFGVGDFFGFGVDAERASVSSD*
Ga0126370_1104924713300010358Tropical Forest SoilDDTARAVLGCGEGTGVGTATARGGGAGVSDAARASFTSGVGVFRGFGVSSSCAELDFPVFVVLSDVFLAPDLFFAVFGFGVGVRWRFAFGVGDFFGFGVDAECASVSSD*
Ga0126372_1021081413300010360Tropical Forest SoilAGVGTAIARGGGAGVSDAARGSSTCGAGVFRGLGVSTFCVDFDFELFFVLSNVLFALDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARVSVSPA*
Ga0126378_1123551223300010361Tropical Forest SoilRAALGCGEGVGVGTAIARGGSAGVSEAALASSTCGAGVFRGLGVSSFCADFDFELLSVLSTVLFALDLFFALFGFGVGVWRRFVFGVGDPFGCGVDAARVSVSPA*
Ga0126378_1191443713300010361Tropical Forest SoilLPAETARAGLGCGERAGVGTAIARGGGATLSDAASRSCSCGTGVFRGLGVSSFREVDFVFFVSSDVFFVPDFFFAVFGFGVGVWRRFVFGVGDFFGLGVDAARVSISSD*
Ga0126378_1223470113300010361Tropical Forest SoilSSTCGAGVFRGLGVSSFCADFDFELFFVLSNVLLGLDSFFALFGFGVGVWRRFVFGVGDLFGRGVDAARVSVCPA*
Ga0126377_1217508923300010362Tropical Forest SoilLGVSTFCVDFDFELFFVLSNVLFALDLFFALFGFGVGAWCRFVFGVGDLFGFGAAAARASVSPA*
Ga0126379_1271276923300010366Tropical Forest SoilLGVSTFCADFDSELFFVLSTVLFALDLFFALFGFGVGAWRRFVFGVGDLFGCGVDAVRVSGSPA*
Ga0134125_1266758513300010371Terrestrial SoilVRAGFGCGEGAGVATAIARGSGAADSVAARSSSTCGAGVFRGLGVSSFRAEFDFAPDFFFVVFGFGVGVWRRFGFGVGDFFGFGVGAERASD*
Ga0134128_1058605423300010373Terrestrial SoilSSTWDAGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAARVSDSSD*
Ga0134128_1087330413300010373Terrestrial SoilGFGCGEGVGVATAIARGGDGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0126381_10450731213300010376Tropical Forest SoilVGVGTAIARGGSAGVSEAALASSACDAGVFRGLGVSTFCADLDFELFSVLSTVVFALDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARVSVSPA*
Ga0134122_1120292823300010400Terrestrial SoilLGVSSFRADFDFSLFFVLSDAFRAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0137399_1175503623300012203Vadose Zone SoilTCVVGVFRGLGVSSFRADFDSALFFAPDFFFDVFGFGVGVWCRFDFGVGDFFGFGVDAECTSVSSD*
Ga0157309_1028040313300012895SoilGCGEGVGVGTAIARGGSAGVSEAALASSTCGAGVFRGLGVSTFCADFDFELFFVFSTVLFALDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARASVSPA*
Ga0164300_1018618313300012951SoilTAIARCGGAAGSDAASSTCGVGVFRGLGVSSFRADFDSALFFAPDFFFDVFGFGVGVWCGFDFGVGDFFGFGVDAECPSDSSD*
Ga0164307_1183556513300012987SoilVFRGLGVSSFRVDFDFAPDFFFVVFGFGVGVWRRFAFGVGDFFGFGVDAERPSVSSD*
Ga0164306_1111702513300012988SoilVRAGFGCGEGTGVATAIARCGGAAGSDAASSTCGVGVFRGLGVSSFRADFDFALDFVFAFFGFGVGVWCRFVFGVGDFFGFGVDAECAPVSSD*
Ga0164305_1042040813300012989SoilGAGVGTASARGGDAAGSGAARASSTCVVGVFRGLGVSSFRADFDSALFFAPDFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAERASVSSD*
Ga0164305_1169150023300012989SoilSSSTCGVGVFRGLGVSSFRVDFDFAPDFFFVVFGFGVGVWRRFAFGVGDFLGFGVDAERASVSSD*
Ga0163163_1086217013300014325Switchgrass RhizosphereLPAGPARAGLGCGEGASVGTAIARGGGAGVSDTPRSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0157376_1092247623300014969Miscanthus RhizospherePAGPARAGLGCGEGASVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0157376_1202480123300014969Miscanthus RhizosphereSICGVDVFRGLGVSSFRADFDFALDLLFAFFGFGVGVWCRFAFGVGDFFGFGVDAECASLSSD*
Ga0182006_116155823300015261RhizosphereATASARSGDAAGSAAARSSSTCGVGVFRGLGVSSFCADSDFALFFAADFFFAAFGFGVGVWCRLGFAVGDFFGFGLDADRVSLSSD*
Ga0132258_1202174413300015371Arabidopsis RhizosphereVRAGFGCGEGAGVATAIARGSGAAGSDVARASSTCGVGVFRGLGVSSFRADFDFALDFVLAFFGFGVGVWCRFAFGVGDFLGFGVDAECAEVSSD*
Ga0132257_10044613823300015373Arabidopsis RhizosphereLPAGPARAGLGCGEGASVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLALDFFFAVFGFGVGVWGRFVFGAGDFFGFGVDAARVSVSSD*
Ga0132257_10148488613300015373Arabidopsis RhizosphereMPDFSITTWACPPAETVRAGFGCGEGAGVATAIARGSGAAGSDAASSTCGVGVFRGLGVSLFWADFDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAERASVSSDWS*
Ga0132257_10249485613300015373Arabidopsis RhizosphereMAIARGGGGVVSDAARSSSTCGAGVFRGLGVSSFCTDFDFALFFSPDFLVFGFGVGVWRRFVFGVGDFLGFGVDAARVSVSSD*
Ga0132257_10330413413300015373Arabidopsis RhizosphereIARCGGAAGSDAASSTCGVGVFRGFGVSSFRADFDFALDFVFAFFGFGVGVWCRFAFGVGDFFGFEVDAEGASVSPD*
Ga0132257_10358540513300015373Arabidopsis RhizosphereGEGAGVATAIARGSGAAGSDAARTSSTCGVGVFRGLGVSSFRANFDFAPDFFFVVFGFGVGVWRRFAFGVGDFFGFGVDAERASVSSD*
Ga0132257_10436216123300015373Arabidopsis RhizosphereCGVGVFRGLGVSSFRVDFDFAPDFFFVVFGFGVGVWRRFAFGVGDFLGFGVDAERASVSSD*
Ga0132255_10036879023300015374Arabidopsis RhizosphereLPAGPARAGLGCGEGADVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLALDFFFAVFGFGVGVCRRFVFGVGDFFGFGVDAARVSVSSD*
Ga0132255_10309355213300015374Arabidopsis RhizosphereTAIARGSGAAGSDAACASSTCGAGVFRGLGVSSFSADFDFALFFVLDFFVAVFGFGVGVWCRFVFGVDAARVSVSSD*
Ga0132255_10348092613300015374Arabidopsis RhizosphereSSTCGAGVFRGLGVSSFCADFDLELFSVLSTVVFALDLFFAPFGFGVGVWRRFVFGVGDLFGCGLDAARDSISPA*
Ga0182036_1129341013300016270SoilRGGGAGVSDAARASSTCGAGVFRGLGVSSFCADFDFELFFVLSNVLFALDSFFALFGFGVGVWRRFVFGVGDLFGFGVAAARASDSPA
Ga0182033_1124808323300016319SoilARGGGAGVSDAACASATCGAGVFRGLGVSSFRADFDFALFFVSSDVFVASDFFFTVFGFGVGVWRRFVFGVGDFFGFGVDAERVSASSD
Ga0182032_1030454533300016357SoilVSDAACASATCGAGVFRGLGVSSFRADFDFALFFVSSDVFVASDFFFTVFGFGVGVWRRFVFGVGDFFGFGVDAERVSASSD
Ga0182034_1023174233300016371SoilLGVSSFRADFDFALFFVSSDVFVASDFFFTVFGFGVGVWRRFVFGVGDFFGFGVDAERVSASSD
Ga0182040_1076917013300016387SoilVSSFRADFDFALFFVSSDVFVASDFFFTVFGFGVGVWRRFVFGVGDFFGFGVDAERVSASSD
Ga0182040_1150816323300016387SoilSTCDAGVFRGLGVSSFCAGFDFTFFFAPDFFVSGFGVGVWRRFVFGVGDFRGFGVDASRVSVSSD
Ga0184618_1047695513300018071Groundwater SedimentAVRASSTWGAGVFRGLGVSSFLADFDFALFFAPDFFFAVFGLGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0184624_1011555313300018073Groundwater SedimentRAGLGCGEGVGVGTAIARGCGAAVSDPARVPSTCGSGVFRGLGVSSFRADFDSALFFAPDFFFAVFGIGVGLWRRFVFGVGDFFGFGVGAARISVSSD
Ga0184612_1011101213300018078Groundwater SedimentSGAAVSDAARASSTCGADVFRGLGVSSADFDFALFFALSDVFSAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0184625_1044562823300018081Groundwater SedimentGVGTAIARGCGAVVSDAAPVSSICGAGVFRGLGVSSFRADFDSALFFAPDFFFAVFGIGVGLWRRFVFGVGDFFGFGVGAARISVSSD
Ga0173479_1043607613300019362SoilVGSAARSSSACGVGVFRGLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASSD
Ga0137408_115710633300019789Vadose Zone SoilEGAGVGTAIVRGCGVAVSDAVRVSSTCGAGVFRGLGVSSFRADFDSALLFALSDVFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGLAAARVSVSSD
Ga0193722_100208313300019877SoilVGTVRTGFGCGEGAGVATAIARGSGAVDSDAARSSSTCGVGVFRGLGVSSFRADFDFAPDFFFVVFGFGVGVWRRFAFGVGDFFGFGVDAERASVSSD
Ga0193725_112214023300019883SoilGAAVSDPVRVSSTCGAGVFRGLGVSSFRADFHSALFFALSDVFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0193727_102482313300019886SoilTAIARGCGAAVSDPARVSSTCGAGVFRGLGVSSFRADFDFALFSALSDVFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0193735_102952933300020006SoilARGCGAAVSDAARVSSTCGAGVFRGLGVSSFRADFDSALLFALSDVFFAPAFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0193745_107039423300020059SoilVRAGLGCGEGVGVATAIARGSGAAGSDAARASSTCVVGVFRGLGVSSFRPDFDSALFFAPDFFFDVFGFGVGVWCRFDFGVGDFFGFGVDAERPSVSSD
Ga0179592_1002976633300020199Vadose Zone SoilGVSSFRADFDSALFFAPDFFFDVFGFGVGVWCRFDFGVGDFFGFGVDAECTSVSSD
Ga0210378_1006687023300021073Groundwater SedimentGTAIARGGGAAGSDAARSSSTCGAGVFRGLGVSSFRADFDFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0193750_109941823300021413SoilSSTCGVGVFRGLGVSSFRADFDFAPDFFFVVFGFGVGVWRRFAFGVGDFFGFGVDAERASVSSD
Ga0210392_1107854523300021475SoilVVFRGLGVSSFRADFDSALFFAPDFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAERASLSSA
Ga0222622_1096592923300022756Groundwater SedimentRAGLVCGEGAGVGTAIARGCGAAVSDPVRVSSTCGAGVFRGLGVSSFRADFHSALFFALSDVFFAPDFFFAVFGFGVGVWRRVVFGVGDFFGFGVAAARVSVSSD
Ga0247693_106655813300024181SoilGVGTAIARGGGGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALSFAPDFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAGCVSVSWE
Ga0207697_1000626063300025315Corn, Switchgrass And Miscanthus RhizosphereVGSDAARSSSACGVGVFRGLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASSD
Ga0207685_1036252813300025905Corn, Switchgrass And Miscanthus RhizosphereVVSDAARASSTWGAGVFRGLGVSSFCTDFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAACVSDSSD
Ga0207684_1057795913300025910Corn, Switchgrass And Miscanthus RhizosphereLSCGEGAGVGTAIARGAGDEVSDAARAFSTCGAGVFRGLGVSSFRADLDFALLFVLSDVFFAPDFFFGVFGFGVGVWRRFVFGVGDFFGFGVDAPSVSVSSD
Ga0207693_1068225123300025915Corn, Switchgrass And Miscanthus RhizosphereVRAGFGCGEGAGVATAIARGSAAAGSDATSSTCGVGVFRGLGVSSFPADFDFFFALFGFGVGVWRRFAFGAGDFFGFGVDAECAPVSSD
Ga0207657_1040587923300025919Corn RhizosphereLASSTCGAGVFRGLGVSTFDADFDLELFFVLSTVFFAPDLFFALFGFGVGVWRRFVFGVGDLFGCGVDAARVSVSPA
Ga0207649_1118890513300025920Corn RhizosphereVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0207646_1149071513300025922Corn, Switchgrass And Miscanthus RhizosphereLSCGEGAGVGTAIARGAGDEVSDAARAFSTCGAGVFRGLGVSSFRADLDFALLFVLSDVFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAVRVSVSSD
Ga0207650_1096489713300025925Switchgrass RhizosphereGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0207659_1033353313300025926Miscanthus RhizosphereLPAGPARAGLGCGEGVSVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFFFAVFGFGVGVWRRFVFGAGDFFGFGVDAARVSVSSD
Ga0207701_1123604613300025930Corn, Switchgrass And Miscanthus RhizosphereGGGATGSDAARSSSTCGAGVFRGLGVSSSRADFDSALFFVLSEVFFVLDFFFAVFGFGVGVWRRFVFGVGDFFGLGVDAARVSAFSD
Ga0207709_1070358113300025935Miscanthus RhizosphereEGVGVATAIARGGDGVVSDAARASSTCGAGVFRGLGVSSFCADFDFALFFAPDFFVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0207669_1101628413300025937Miscanthus RhizosphereAEGDGVATAIARGSGAAGSDVVRASSTCGVDVFRGLGVSSFRADFDFFFALFGFGVGVWCRFAFGVGDFFGFGVDAECASLSSD
Ga0207651_1210156213300025960Switchgrass RhizosphereVFRDLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASS
Ga0207640_1216373523300025981Corn RhizosphereVGSDAARSSSACGVGVFRGLGVSSFCADFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASS
Ga0207703_1049173723300026035Switchgrass RhizosphereGAARTGFSCGEGVGVGTAIARGGGGVVSDAARASSTWDAGVFRGLGVSSFCADFDLELFFAPDFFVFGFGVGVWRRFVFGVGDFLGFGVEAARVSDSSD
Ga0209688_101169313300026305SoilAIARGGGDAFSDAARGSSICGAGVFGGLGVSSFSADFDFSLFVVLSDAFFAPVFFFAGFGVGVWRRFVFGVGDFFGFGVDASRMSVSSD
Ga0179593_105813953300026555Vadose Zone SoilVGTAIARGCGAAVSDAARVSFYLRRRRFRGLGVSSFRADFDSALLFALSDVFFAPDFFFAVFGFGVGVWRRFVFGGGEFLWFSEWTRRASAASSD
Ga0307298_1008168733300028717SoilVRADFGCGEGAGVATASARGSGAGDSDPASSTCGAGVFRGLGVSSFRADFDSALFFAPDFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAERASVSSD
Ga0307307_1018076723300028718SoilVGTAIARGCGAAVSDAARVSSTCGAGVFRGLGVSSFRADFDSALLFALSDVFFAPAFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSASSD
Ga0307280_1022334313300028768SoilVRAGFGCGEGAGVATAIARGSGAVDSDAARSSSTCGVGVFRGLGVSSFRADFDFAPDFFFVVFGFGVGVWRRFAFGVGDFFGFGVDAERASVSSD
Ga0307320_1012108913300028771SoilAGLGCGEGAGVGTAIARGSGAAVSDAARASSTCGAGVFRGLGVSSADFDFALFFALSDVFFAPDFFFAVFGFGVGVWRRVVFGVGDFFGFGVDAARVSVSSD
Ga0307282_1029904523300028784SoilVRADFGCGEGAGVATASARGSGAVDSDLASSTCGAGVFRGLGVSSFRADFDSALFFAPDFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAERASVSSD
Ga0307323_1011711313300028787SoilVRADFGCGEGAGVATASARGSGAADSDPASSTCGAGVFRGLGVSSFRADFHSALFFALSDVFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0307281_1025444513300028803SoilLGVSSFCADFDFALFFALSDVFVVPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0307292_1024791413300028811SoilGAGVGTAIARGCGAAVSDPVRVSSTCGAGVFRGLGVSSFRADFHSALFFALSDVFFAPDFFFAVFGFGVGVWRRVVFGVGDFFGFGVAAARVSVSSD
Ga0307296_1021529523300028819SoilAARASSTCGAGVFRGLGVSSFRADFDSALFFALSDVFFAPDFFFAVFGFGVGVWRRVVFGVGDFFGFGVAAARVSVSSD
Ga0307310_1009949013300028824SoilDPVRVSSTCGAGVFRGLGVSSFRADFHSALFFALSDVFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0307289_1001834343300028875SoilAIARGCGAAVSDAARASSTCGAGVFRGLGVSSFRADFDSALFFALSDVFFAPDFFFAVFGFGVGVWRRVVFGVGDFFGFGVAAARVSVSSD
Ga0307300_1019825923300028880SoilRGLGVSSFRAEFDFALFFLLSDVFFAPNFFVAVFGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0307304_1009897923300028885SoilVSSTCGAGVFRGLGVSSFRADFHSALFFALSDVFFAPDFFFAVFGFGVGVWRRVVFGVGDFFGFGVAAARVSVSSD
Ga0075377_1000159123300030844SoilESARGVDAAGSGAARASSTCVVGVFRGLGVSSFCADFDSALFFAPDLFFDVFGFGVGVWCRFDFGVGDFFGFGVDAERPSVSSD
Ga0075386_1004186223300030916SoilMAIARGSGAAGSAAARASSTCVVGVFRGLGVSSFCADFDSALFFAPDFFFDVFGFGVGVWCRFDFGVGDFFGFGVDAERPSVSSD
Ga0170834_10489322313300031057Forest SoilARAGGAALSDAARSSSTCGAGVFRGLGVSSIRADFDFAAFFISSDVFFVPDFFFAVFGFGVGVWRRLVFGVGDFFDFGVDSARVSVSSD
Ga0170823_1294851413300031128Forest SoilRSSSTCGAGVFRGLGVSSIRADFDFAAFFISSDVFFVPDFFFAVFGFGVGVWRRLVFGVGDFFDFGVDSARVSVSSD
Ga0307499_1030995913300031184SoilRAGLVCGEAAGVGTAIARGCGAAASDPVRVSSTCGAGVFRGSGVSSLGADFDSALFSALSDVFFAPDFFFAVFGFGVGMWRRFVFGVGDFFGFGVAAARVSVSSD
Ga0170824_11095105213300031231Forest SoilARAGGAALSDAARSSSTCGAGVFRGLGVSSIRADFDFAAFFISSDVFFVPDFFFAVFGFGVGVWRRLVFGVGDFFDFAVDSARVSVSSD
Ga0170820_1413231613300031446Forest SoilGFGCSVGAGVGTAIARGGVAAGSDAARSSFTCGAGVFRGLGVSSFRADFDFAPDFLFAVFGFGVGVWCRFVFGVGDFFGFGVDAARVSVSSD
Ga0170820_1784201823300031446Forest SoilEGAGVGTAIARGSGAGVSDAARVSSTCGAGVLRGSGVSSFRADFDSAFLLAPDFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAACVSVSSD
Ga0170819_1680107513300031469Forest SoilTASARGGDAAGSGAARASSTCVVGVFRGLGVSSFCADFDSALFFAPDFFFDVFGFGVGVWCRFDFGVGDFFGFGVDAERPSVSSD
Ga0307468_10110647633300031740Hardwood Forest SoilGSDAARSSSTCGVGVFRGLGVSSFRADFDFAPDFFLVVFGFGVGVWCRFVFGVGDFFGFGVDGARVSVSSD
Ga0310907_1061149723300031847SoilGAGVFRGLGVSSFSAAFDFALSFVLDFFFAVFGFGVGVWRRFVFGVGDFFGFGVEVARVSVSSD
Ga0310892_1058216313300031858SoilSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFFFAVFGFGVGVWRRFVFGAGDFFGFGVDAARVSVSSD
Ga0306925_1042291823300031890SoilAATVRAGFGCGEGVGVATAIARGSGGVVSDAARSSSTCDAGVFRGLGVSSFCAGFDFTFFFAPDFFVSGFGVGVWRRFVFGVGDFRGFGVDASRVSVSSD
Ga0310900_1135252123300031908SoilDVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLALDFFFAVFGFGVGVWRRFVFGAGDFFGFGVDAARVSVSSD
Ga0310884_1105161813300031944SoilGVSSFSADFDFALVFAADFFFAVFGFGVGVWCRFAFGVGDFFGFGVDAACVSVSSD
Ga0310913_1108050713300031945SoilDGVGTAIARGGGGVACASSTCGVGVFRGLGVSSFRIDFDVPLSVSLTDVFFSPDFFFGVFGFGVGVWRRFVFGVGDFFGFGVDVERASVSSD
Ga0310913_1117512313300031945SoilGAGVATAIARGGGAGVSDAACASATCGAGVFRGLGVSSFRADFDFALFFVSSDVFVASDFFFTVFGFGVGVWRRFVFGVGDFFGFGVDAERVSASSD
Ga0310909_1088548323300031947SoilAALGCGEDAGVGTAIARGGGAGVSDAARASSTCGAGVFRGLGVSSFCADFDFELFFVLSNVLFALDSFFALFGFGVGVWRRFVFGVGDLFGFGVAAARASDSPA
Ga0310909_1136709613300031947SoilTAIARGGGAGVSDAACASATCGAGVFRGLGVSSFRADFDFALFFVSSDVFVASDFFFTVFGFGVGVWRRFVFGVGDFFGFGVDAERVSASSD
Ga0310902_1118318213300032012SoilLPAGPARAGLGCGEGVGVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSAAFLAPDFFFAVFGFGVGVWGRFVFGAGDFFGFGVDAARVSVSSD
Ga0310906_1062090923300032013SoilGVGVFRGLGVSSFRAEFDFAPDFFFVVFGFGVGVWRRFAFGVGDFFGFGVDAERASVSSD
Ga0310899_1003670633300032017SoilGGGAGVSDTPRSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFFFAVFGFGVGVWRRFVFGAGDFFGFGVDAARVSVSSD
Ga0318532_1035932513300032051SoilARASSTCGAGVFRGLGVSSFCADFDFELFFVLSNVLFALDSFFALFGFGVGVWRRFVFGVGDLFGFGVAAARASDSPA
Ga0308173_1032875323300032074SoilVGSDAARSSSACGVGVFRGLGVSSFCVDFDFALFFAPDFLFAVFGLGVGVWCRFAFGVGDFFGFGVDAECASASSD
Ga0310890_1161899513300032075SoilLPAGPARAGLGCGEGVSVGTAIARGGGAGVSDTARSSSTCGDGVFRGLGVSSFRADFDFSLFFVLSDAFLAPDFFFAVFGFGVGVWRRFVFGAGDFFGFGVDAARDSISSD
Ga0307470_1133811613300032174Hardwood Forest SoilLGVSSFRADFGFALFFALSDVFFSPEFFFAGFGVGVWRRFVFGVGDFFGFGVDAARVSVSSD
Ga0307471_10002828013300032180Hardwood Forest SoilFRGLGVSSFRAEFDFALFFAPDFFFAVFGFGVGVWRRFVFGVGDFFGFGVDAALFSVSSD
Ga0306920_10216706923300032261SoilSFRIDFDVPLSVSLTDVFFSPDFFFGVFGFGVGVWRRFVFGVGDFFGFGVDVERASVSSD
Ga0364943_0241558_1_2793300034354SedimentGEGVGVGTAIARGCGAAVSDPARVPSTCGSGVFRGLGVSSFRADFDSALFFAPDFFFAVFGIGVGVWRRFVFGVGDFLGFGVDAARVSVSSD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.