Metagenome / Metatranscriptome Family F036884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036884
Family Type	Metagenome / Metatranscriptome
Number of Sequences	169
Average Sequence Length	49 residues
Representative Sequence	MASVTKILPPYALTYDPTTIPAGKVNQALGLTSAGGGYYNPADPEQP
Number of Associated Samples	136
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.59 %
% of genes near scaffold ends (potentially truncated)	98.22 %
% of genes from short scaffolds (< 2000 bps)	91.72 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.249 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.544 % of family members)
Environment Ontology (ENVO)	Unclassified (29.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.438 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.67% β-sheet: 0.00% Coil/Unstructured: 85.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF00115	COX1	42.60
PF09678	Caa3_CtaG	0.59
PF01040	UbiA	0.59
PF02790	COX2_TM	0.59
PF13759	2OG-FeII_Oxy_5	0.59
PF12704	MacB_PCD	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.25 %
Unclassified	root	N/A	17.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.25 %
Unclassified	root	N/A	17.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.25 %
Unclassified	root	N/A	17.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.66 %
Unclassified	root	N/A	17.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.07 %
Unclassified	root	N/A	17.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.37 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.78 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.75 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.78 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.18 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.59 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.59 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.75 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.78 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.18 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.59 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.59 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.75 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.78 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.18 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.59 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.75 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples	1.18 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.59 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.75 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.78 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1.18 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.59 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10567301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300002245\|JGIcombinedJ26739_100940374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300004091\|Ga0062387_101399586	Not Available	557	Open in IMG/M
3300004121\|Ga0058882_1013926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300004635\|Ga0062388_102259072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005436\|Ga0070713_101472340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300005436\|Ga0070713_102325279	Not Available	519	Open in IMG/M
3300005437\|Ga0070710_11115806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300005439\|Ga0070711_101335840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300005537\|Ga0070730_10091633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2114	Open in IMG/M
3300005564\|Ga0070664_101284596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300005602\|Ga0070762_10059045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2132	Open in IMG/M
3300005610\|Ga0070763_10106591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300005610\|Ga0070763_10365326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300005712\|Ga0070764_10843368	Not Available	572	Open in IMG/M
3300006162\|Ga0075030_101381257	Not Available	552	Open in IMG/M
3300006173\|Ga0070716_100295924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300006176\|Ga0070765_101408147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300006755\|Ga0079222_11855000	Not Available	586	Open in IMG/M
3300006871\|Ga0075434_101929812	Not Available	596	Open in IMG/M
3300007076\|Ga0075435_100741996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300009624\|Ga0116105_1144151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300009839\|Ga0116223_10457085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300010048\|Ga0126373_12538458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300010366\|Ga0126379_11625837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300010371\|Ga0134125_10146895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2627	Open in IMG/M
3300010867\|Ga0126347_1435825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300010876\|Ga0126361_11237745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300010880\|Ga0126350_11651309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300011269\|Ga0137392_11378724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300011270\|Ga0137391_10282243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1435	Open in IMG/M
3300012201\|Ga0137365_10004644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11017	Open in IMG/M
3300012357\|Ga0137384_10531577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300012924\|Ga0137413_10279258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300014657\|Ga0181522_10217676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1125	Open in IMG/M
3300014838\|Ga0182030_10357765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300017821\|Ga0187812_1286232	Not Available	524	Open in IMG/M
3300017823\|Ga0187818_10233459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300017926\|Ga0187807_1050676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1288	Open in IMG/M
3300017932\|Ga0187814_10192092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300017932\|Ga0187814_10233123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300017940\|Ga0187853_10050318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2139	Open in IMG/M
3300017955\|Ga0187817_10848466	Not Available	584	Open in IMG/M
3300017970\|Ga0187783_10756042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300018006\|Ga0187804_10091340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1241	Open in IMG/M
3300018008\|Ga0187888_1057591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1763	Open in IMG/M
3300018022\|Ga0187864_10004745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10491	Open in IMG/M
3300018034\|Ga0187863_10295170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	901	Open in IMG/M
3300018035\|Ga0187875_10779078	Not Available	500	Open in IMG/M
3300018047\|Ga0187859_10656148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300018086\|Ga0187769_10596762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300019179\|Ga0184593_101126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300019192\|Ga0184603_138292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300019258\|Ga0181504_1445632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300019260\|Ga0181506_1178385	Not Available	547	Open in IMG/M
3300019268\|Ga0181514_1412498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300020077\|Ga0206351_10423922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	991	Open in IMG/M
3300020579\|Ga0210407_11236915	Not Available	560	Open in IMG/M
3300020581\|Ga0210399_10586229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300020582\|Ga0210395_10410200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1019	Open in IMG/M
3300020582\|Ga0210395_10847969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300020582\|Ga0210395_11413648	Not Available	507	Open in IMG/M
3300021086\|Ga0179596_10402630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300021088\|Ga0210404_10717299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300021170\|Ga0210400_11386901	Not Available	561	Open in IMG/M
3300021180\|Ga0210396_11010280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300021401\|Ga0210393_10744345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300021401\|Ga0210393_11196989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300021401\|Ga0210393_11468241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300021402\|Ga0210385_10021463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4095	Open in IMG/M
3300021402\|Ga0210385_10260252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1277	Open in IMG/M
3300021402\|Ga0210385_11267962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300021403\|Ga0210397_11489509	Not Available	525	Open in IMG/M
3300021404\|Ga0210389_10457948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300021404\|Ga0210389_10844382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300021405\|Ga0210387_11263000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300021406\|Ga0210386_10484607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1068	Open in IMG/M
3300021406\|Ga0210386_10910738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300021406\|Ga0210386_11318488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300021420\|Ga0210394_10234313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1606	Open in IMG/M
3300021432\|Ga0210384_11836251	Not Available	512	Open in IMG/M
3300021433\|Ga0210391_10657709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300021474\|Ga0210390_10563416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300021474\|Ga0210390_11071561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300021477\|Ga0210398_10701855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	818	Open in IMG/M
3300021477\|Ga0210398_11004521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300021560\|Ga0126371_10755938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300021560\|Ga0126371_12885995	Not Available	582	Open in IMG/M
3300022513\|Ga0242667_1011135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300022522\|Ga0242659_1053556	Not Available	718	Open in IMG/M
3300022523\|Ga0242663_1013749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1131	Open in IMG/M
3300022527\|Ga0242664_1004831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1661	Open in IMG/M
3300022528\|Ga0242669_1028491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300022528\|Ga0242669_1060490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300022530\|Ga0242658_1061081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300022532\|Ga0242655_10142537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300022711\|Ga0242674_1000686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2371	Open in IMG/M
3300022714\|Ga0242671_1039419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300022714\|Ga0242671_1058723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300022718\|Ga0242675_1075528	Not Available	610	Open in IMG/M
3300022721\|Ga0242666_1078859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	736	Open in IMG/M
3300022721\|Ga0242666_1165892	Not Available	548	Open in IMG/M
3300022722\|Ga0242657_1085943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	754	Open in IMG/M
3300022726\|Ga0242654_10137843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300025434\|Ga0208690_1054234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300025634\|Ga0208589_1025435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1650	Open in IMG/M
3300025906\|Ga0207699_10195131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300025906\|Ga0207699_10470200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300025914\|Ga0207671_11179853	Not Available	599	Open in IMG/M
3300025928\|Ga0207700_10039529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3435	Open in IMG/M
3300025929\|Ga0207664_10816835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300026095\|Ga0207676_11685769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300027030\|Ga0208240_1013547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300027158\|Ga0208725_1048705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300027297\|Ga0208241_1005351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1674	Open in IMG/M
3300027619\|Ga0209330_1008355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2311	Open in IMG/M
3300027652\|Ga0209007_1039536	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300027652\|Ga0209007_1060138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300027725\|Ga0209178_1281242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300027855\|Ga0209693_10049658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2063	Open in IMG/M
3300027855\|Ga0209693_10103845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300027855\|Ga0209693_10178565	Not Available	1047	Open in IMG/M
3300027884\|Ga0209275_10373640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300027895\|Ga0209624_10785485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300028789\|Ga0302232_10468331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300029636\|Ga0222749_10602045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300029882\|Ga0311368_10012417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8545	Open in IMG/M
3300029999\|Ga0311339_10510222	Not Available	1220	Open in IMG/M
3300030053\|Ga0302177_10642831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300030053\|Ga0302177_10696547	Not Available	514	Open in IMG/M
3300030509\|Ga0302183_10091455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1200	Open in IMG/M
3300030520\|Ga0311372_11009336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300030520\|Ga0311372_12005807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300030520\|Ga0311372_12710274	Not Available	548	Open in IMG/M
3300030545\|Ga0210271_11042193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300030548\|Ga0210252_10487709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300030580\|Ga0311355_10950519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300030598\|Ga0210287_1077505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300030629\|Ga0210268_1013376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300030730\|Ga0307482_1141588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300030741\|Ga0265459_10486669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300030906\|Ga0302314_11594336	Not Available	583	Open in IMG/M
3300031231\|Ga0170824_104065122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300031231\|Ga0170824_112114195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300031236\|Ga0302324_101090150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300031236\|Ga0302324_103385098	Not Available	520	Open in IMG/M
3300031249\|Ga0265339_10013794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4891	Open in IMG/M
3300031708\|Ga0310686_111101252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300031708\|Ga0310686_112274505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300031708\|Ga0310686_115670484	Not Available	528	Open in IMG/M
3300031715\|Ga0307476_10500118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300031780\|Ga0318508_1046341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300031897\|Ga0318520_10090027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1703	Open in IMG/M
3300032042\|Ga0318545_10135406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300032063\|Ga0318504_10027910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2213	Open in IMG/M
3300032068\|Ga0318553_10630748	Not Available	561	Open in IMG/M
3300032072\|Ga0326631_113636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300032515\|Ga0348332_12080187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300032805\|Ga0335078_11610211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300032895\|Ga0335074_11035695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300032895\|Ga0335074_11250867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	619	Open in IMG/M
3300032895\|Ga0335074_11430215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300032895\|Ga0335074_11539989	Not Available	525	Open in IMG/M
3300032898\|Ga0335072_11025339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300032898\|Ga0335072_11616738	Not Available	546	Open in IMG/M
3300032954\|Ga0335083_10332241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1323	Open in IMG/M
3300033134\|Ga0335073_11306394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300033158\|Ga0335077_10536566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1231	Open in IMG/M
3300033475\|Ga0310811_10865972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.45%
Host-Associated	Host-Associated	3.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.43%
Aquatic	Environmental → Aquatic	13.02%
Plants	Host-Associated → Plants	3.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.15%
Freshwater	Environmental → Aquatic → Freshwater	12.43%
Peat	Environmental → Terrestrial → Peat	7.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.96%
Sediment	Environmental → Aquatic → Sediment	0.59%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.89%
Loam	Environmental → Terrestrial → Soil → Loam	16.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.59%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.54%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.37%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.18%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.18%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.59%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.59%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019179	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019192	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030548	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR016SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030598	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_105673011	3300001593	Forest Soil	PPYALTYDPTVIPNIGKVLVQLGITSAGGGYYNPNDPEQP*
JGIcombinedJ26739_1009403742	3300002245	Forest Soil	LAAVTKILPPYALTYDPTNIPAGKINQALGLTSAGGGYYNPADPEQP*
Ga0062387_1013995862	3300004091	Bog Forest Soil	NYGRVVPVSVFMTWAHATAIQLASLTKILPPYALTYDPTAINLGKVNQQLGLTGAGGGFYNPADPEQP*
Ga0058882_10139261	3300004121	Forest Soil	VTGEVLSDANFMAWTKSEAVKLASVTKMLPPYALTYDPTVLANVGAVNTALGLTSAGGGYYNPADPEQP*
Ga0062388_1022590722	3300004635	Bog Forest Soil	QLASLTKILPPYALTYDPTVIPNIGKVLVQLGITSAGGGYYNPNDPEQP*
Ga0070713_1014723402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GFQAWTKATAVKMASLTKILPPYALTYDPTIIPAGKINEELGLTSAGGGYYNPADPEQP*
Ga0070713_1023252791	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QVMSDADFLAWTKSTQVKMASVTKILPPYALTYDPTTIPAGKINVELGLTSAGGGFYNPADPEQP*
Ga0070710_111158061	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAWTQATKTKLADVTKILPPYALTYDPTIIPAGKINVALGLTSAGGGFYNPADPEQP*
Ga0070711_1013358401	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTKILPPYALTYDPTNIPAGKINQELGLTSAGGGYYNPADPEQP*
Ga0070730_100916331	3300005537	Surface Soil	TYDPTNLSVLGTVNVKLGLVGAGGGFYNPADPEQP*
Ga0070664_1012845961	3300005564	Corn Rhizosphere	TKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP*
Ga0070762_100590451	3300005602	Soil	GDVMSVSDFLKWTQTSKVQLAAVTKILPPYALTYDPTNIPAGKINTALGLTSAGGGYYNPADPEQP*
Ga0070763_101065911	3300005610	Soil	ALTYDPTVIPNIGKVLVQLGITSAGGGYYNPSDPEQP*
Ga0070763_103653262	3300005610	Soil	TYDPTGIANLGKVLVQLGIGGAGGGYYPPNDPEQP*
Ga0070764_108433682	3300005712	Soil	SVSDFLKWTQTSKVQLAAVTKILPPYALTYDPTNIPAGKINQALGLTSAGGGYYNPADPEQP*
Ga0075030_1013812571	3300006162	Watersheds	TEATKLASVTKLLPPYALTYDPTNLNLGKVNAALGLTGAGGGFYNPADPEQP*
Ga0070716_1002959241	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTKILPPYALTYDPTIIPAGKINVALGLTSAGGGFYNPADPEQP*
Ga0070765_1014081471	3300006176	Soil	TESVKLASVTKLLPPYALTYDPTVVNNMGKVNAALGLTGSGGGFYNPADPEQP*
Ga0079222_118550001	3300006755	Agricultural Soil	INLAAVTKLLPPYALTYDPTVLAKVGKVNEQLGLTSAGGGYYNPADPVQP*
Ga0075434_1019298121	3300006871	Populus Rhizosphere	QATAVKMASVTKILPSYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP*
Ga0075435_1007419961	3300007076	Populus Rhizosphere	KMASVTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP*
Ga0116105_11441511	3300009624	Peatland	KMLPPYAMTYDPTDIASLGKVLVQLGIGGAGGGYYPPNDPEQP*
Ga0116223_104570852	3300009839	Peatlands Soil	LAWAAGTRVQLASVTKILPPYATTYDPTEIATLGKVNVKLGLTGAGGGYYPPQDPSQP*
Ga0126373_125384582	3300010048	Tropical Forest Soil	LPPYALTYDPTSLNMGKVNAALGLTGAGGGFYNPADPEQP*
Ga0126379_116258371	3300010366	Tropical Forest Soil	LTYDPTVVPILGKVLVQLGLNGAGGGYYSPNDPEQP*
Ga0134125_101468953	3300010371	Terrestrial Soil	FMAWTQATAVKMASVTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP*
Ga0126347_14358251	3300010867	Boreal Forest Soil	VADFLKWTQTSKVQLAAVTKILPPYALTYDPTTIPAGKVNTALGLTSAGGGYYNPADPEQP*
Ga0126361_112377451	3300010876	Boreal Forest Soil	YDPTVVPNLGKVLGQLGLTGAGGGYYSPNDPEQP*
Ga0126350_116513091	3300010880	Boreal Forest Soil	AFLTWTQTTRARLAAVTTLLPPYALTYDPTKITNLGPVNVMLGLTGAGGGYYNPADPEQP
Ga0137392_113787241	3300011269	Vadose Zone Soil	LTYDPTNIPAGKVNQALGLTSAGGGYYNPADPEQP*
Ga0137391_102822431	3300011270	Vadose Zone Soil	TSTSLANVSSLLPPYNTTYDPTAVAKLGTVLTKLGLTGAGGGYYNSADPAQP*
Ga0137365_100046441	3300012201	Vadose Zone Soil	EPQLADVTKLLPPYATIYDPAVIPKIGQVLVKLGITGAGGGYYPPQDPGNGP*
Ga0137384_105315772	3300012357	Vadose Zone Soil	PYATIYDPAVIPKIGQVLVKLGITGAGGGYYPPQDPGNGP*
Ga0137413_102792581	3300012924	Vadose Zone Soil	VKMASVTKILPPYALTYDPTNIPAGKINVALGLTSAGGGYYNPADPEQP*
Ga0181522_102176761	3300014657	Bog	TKTKLAGLTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP*
Ga0182030_103577652	3300014838	Bog	MLPPYAATYDPTDIASLGKVLVQLGIGGAGGGYYNPNDPEQP*
Ga0187812_12862321	3300017821	Freshwater Sediment	TANFEAWAQATKTKMADVTKLLPPYALTYDPTVVATMGKVNAALGLTGAGGGFYNPADPEQP
Ga0187818_102334592	3300017823	Freshwater Sediment	PPYALTYDPTTLTNLGKVNQQLGLTGAGGGYYNPADPEQP
Ga0187807_10506761	3300017926	Freshwater Sediment	TETAMAKITAALPPYALTYDLTVVPVLGKVLVQLGLTGAGGGFYNPNDPEQP
Ga0187814_101920922	3300017932	Freshwater Sediment	MFTTGQVMSDADFMAWTKTTATQLAAVTKLLPPYATTYDPTVVATMGKVNQQLGLTGGGGGYYSPGDPVQP
Ga0187814_102331232	3300017932	Freshwater Sediment	WAHSSETQLASVTKLLPPYALTYDPTVVASMGKVNSQLGLTGAGGGFYNPADPEQP
Ga0187853_100503182	3300017940	Peatland	LAWAAGTRVQLASVTKILPPYATTYDPTEIATLGKVNVKLGLTGAGGGYYPPQDPSQP
Ga0187817_108484662	3300017955	Freshwater Sediment	LPPYALTYDPTVIKTLGLVLTKLGLTGAGGGWFGPQVPVQP
Ga0187783_107560422	3300017970	Tropical Peatland	WADHTEIQLAALTKLLPPFSLTYDPTEISTLGPVLVKLGLTGAGGGYYNPADPEQP
Ga0187804_100913401	3300018006	Freshwater Sediment	LTYDPTVVPVLGKVLVQLGLTGAGGGFYNPNDPEQP
Ga0187888_10575911	3300018008	Peatland	LPPYATTYDPTEIATLGKVNVKLGLTGAGGGYYPPQDPSQP
Ga0187864_100047451	3300018022	Peatland	KILPPYATTYDPTEIATLGKVNVKLGLTGAGGGYYPPQDPSQP
Ga0187863_102951702	3300018034	Peatland	LPAYADSYDPTDISTLGAVNVKLGLTGAGGGFYNPVDPEQP
Ga0187875_107790781	3300018035	Peatland	QTWAQQTETQLASVTKMLPPYAMTYDPTDVANLGKVLVQLGIGGAGGGYYNPNDPEQP
Ga0187859_106561482	3300018047	Peatland	WAQQTETRLASLTKQLPPYAMTYDPTDIANLGKVLGQLGIGGAGGGYYSPNDPEQP
Ga0187769_105967622	3300018086	Tropical Peatland	PYSLTYDPTVVPVLGKVLVQLGLTGAGGGYYNPADPEQP
Ga0184593_1011261	3300019179	Soil	KLLPPYALTYDPTVVASMGKVNAALGLTGAGGGYYNPADPEQP
Ga0184603_1382922	3300019192	Soil	VTKILPPYALTYDPTNIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0181504_14456321	3300019258	Peatland	ATYDPTTISNMGEVNTKLGLVGAGGGYYNPADPEQP
Ga0181506_11783852	3300019260	Peatland	SVAAFLKWTQTTKVQLAALTKILPPYALTYDPTTIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0181514_14124981	3300019268	Peatland	VSVPAFLQWTQTTKVSLAALTKILPPYALTYDPTTIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0206351_104239222	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	WTQATAVKMASVTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0210407_112369151	3300020579	Soil	STFMTWAHATEIQLASLTKLLPPYALTYDPTSINLGKINQQLGLTGAGGGFYNPADPEQP
Ga0210399_105862291	3300020581	Soil	YALTYDPTAINLGKVNQALGLTGAGGGFYNPADPEQP
Ga0210395_104102002	3300020582	Soil	VTKLLPPYALTYDPTVVATMGKVNQQLGLTGAGGGYYNPADPEQP
Ga0210395_108479692	3300020582	Soil	KATQIRLASVTRLLPPYALTYDPTTIKTLGPVFVKLGLTGAGGGYYGPQYVAGP
Ga0210395_114136481	3300020582	Soil	ESVKLASVTKMLPPYALTYDPTVLSNVGAVNTALGLTSAGGGYYNPADPEQP
Ga0179596_104026302	3300021086	Vadose Zone Soil	SDFLAWTKATAVKMASVTKILPPYALTYDPTNIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0210404_107172992	3300021088	Soil	LPPYALTYDPTSLNMGKVNAALGLTGAGGGFYNPADPEQP
Ga0210400_113869011	3300021170	Soil	VSAFMTWAHATEIQLAALTKILPPYALTYDPTVIANVGKVNEELGLTSAGGGYYNPADPEQP
Ga0210396_110102802	3300021180	Soil	DVTQLLPPYAASYDPSTINNLGAVNVKLGLVGAGGGYYNPADPEQP
Ga0210393_107443451	3300021401	Soil	QTTRVQLADVTKLLPPYAETYDPTVVNSMGAVNTKLGLTGAGGGFYNPADPEQP
Ga0210393_111969892	3300021401	Soil	ATKLASVTKLLPPYALTYDPTSLNLGKVNTALGLTGAGGGFYNPADPEQP
Ga0210393_114682412	3300021401	Soil	LPPYALTYDPTNIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0210385_100214631	3300021402	Soil	TTEVQLASVTKILPPFALTYDPTAIKTLGPVLVKLGLTGAGGGFYGPQVPVQP
Ga0210385_102602521	3300021402	Soil	QLAAVTKLLPPYAVTYDPTVVATMGKVNQQLGLTGAGGGYYNPADPEQP
Ga0210385_112679622	3300021402	Soil	SVTKLLPPYALTYDPTTLNLGPVNVALGLTGAGGGYYNPADPEQP
Ga0210397_114895092	3300021403	Soil	YALTYDPTNIPAGAVNQALGLTSAGGGYYNPADPEQP
Ga0210389_104579481	3300021404	Soil	KILPPYALTYDPTVIANVGKVNEELGLTSAGGGYYNPADPEQP
Ga0210389_108443821	3300021404	Soil	DSDFMAWTQTEATKLASVTKILPPYALTYDPTNIPAGKINVALGLTSAGGGYYNPADPEQ
Ga0210387_112630002	3300021405	Soil	KLLPPYALTYDPTSINLVKINQQLGLTGAGGGFYNPADPEQP
Ga0210386_104846072	3300021406	Soil	VSVSDFMSWTHSTAIQLAAVTKLLPPYALTYDPTVVASMGKVNTQLGLTGAGGGFYNPADPEQP
Ga0210386_109107382	3300021406	Soil	QSQATKLASVTKLLPPYALTYDPTNLNLGKVNTALGLTGAGGGFYNPADPEQP
Ga0210386_113184882	3300021406	Soil	TKLLPPYALTYDPTTLNLGPVNVALGLTGAGGGYYNPADPEQP
Ga0210394_102343132	3300021420	Soil	FDTGEVLTDSSFMAWTQTESVKLASVTKLLPPYALTYDPTNLNLGKVNAALGLTGAGGGFYNPADPEQP
Ga0210384_118362511	3300021432	Soil	ALTYDPTTLNLGKVNAALGLTGSGGGFYNPADPEQP
Ga0210391_106577091	3300021433	Soil	PPYALTYDPTVIANVGKVNEELGLTSAGGGYYNPADPEQP
Ga0210390_105634162	3300021474	Soil	TKILPPYAMTYGPTDVAALGKVLVQLGIGGAGGGYYSPNDPEQP
Ga0210390_110715611	3300021474	Soil	YALTYDPTGIANLGKVLVQLGIGGAGGGYYPPNDPEQP
Ga0210398_107018551	3300021477	Soil	YDTGDVMSVAAFLKWTQTTRVQLADVTKLLPPYADSYDPTTISTLGKVNVKLGLVGAGGGYYNPADPEQP
Ga0210398_110045212	3300021477	Soil	LPPYAMTYDPTDVAALGKVLVQLGIGGAGGGYYSPNDPEQP
Ga0126371_107559381	3300021560	Tropical Forest Soil	TYDPTVLAKVGKVNEQLGLTSAGGGFYNPADPEQP
Ga0126371_128859952	3300021560	Tropical Forest Soil	WAQQTRVQLASVTRMLPPYSLTYDPTVVPILGKVLVQLGLNGAGGGYYSPNDPEQP
Ga0242667_10111352	3300022513	Soil	LAALTKILPPYALTYDPTNIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0242659_10535561	3300022522	Soil	TKLASVTKALPPYALTYDPTVVNSMGAVNTALGLTGAGGGYYNPADPEQP
Ga0242663_10137493	3300022523	Soil	MYDTGEVMPVAAFLKWTQTTRVQLADVTKLLPPYADSYDPTTISTLGKVNVKLGLVGAGGGYYNPADPEQP
Ga0242664_10048311	3300022527	Soil	TGEVLTDSSFMAWTQTESVKLASVTKLLPPYALTYDPTNLNLGKVNAALGLTGAGGGFYNPADPEQP
Ga0242669_10284911	3300022528	Soil	MSWTHSSEIQLAAVTKMLPPYALTYDPTVLANVGKVNQQLGLTSAGGGYYNPADPEQP
Ga0242669_10604901	3300022528	Soil	TKILPPYALTYDPTVLANVGKVNEELGLTSAGGGYYNPADPEQP
Ga0242658_10610811	3300022530	Soil	TAVQLASVTKILPPYALTYDPTTIPAGAINQALGLTSAGGGYYNPADPEQP
Ga0242655_101425371	3300022532	Soil	LTYDPTVVPVLGKVLVQLGLTGAGGGYYNPNDPEQP
Ga0242674_10006861	3300022711	Soil	PVSTFMTWAHATQIQLASLTKLLPPYALTYDPTTIANLGKVNQQLGLTGAGGGFYNPADPEQP
Ga0242671_10394191	3300022714	Soil	KILPPYALTYDPTVIPVIGKVLVQLGITSAGGGYYNPNDPEQP
Ga0242671_10587231	3300022714	Soil	QLASLTKQLPPYALTYDPTDIPTIGKVLLQLGVTGAGGGYYNPNDPEQP
Ga0242675_10755281	3300022718	Soil	EIQLASLTKLLPPYALTYDPTSINLGKVNQQLGLTGAGGGFYNPADPEQP
Ga0242666_10788591	3300022721	Soil	LTYDPTVIPVVGKVLLQLGITSAGGGYYNPNDPEQP
Ga0242666_11658921	3300022721	Soil	PYAVTYDPTVVATMGKVNQQLGLTGAGGGYYNPADPEQP
Ga0242657_10859433	3300022722	Soil	TKILPPYALTYDPTNIPAGAINQALGLTSAGGGYYNPDDPEQP
Ga0242654_101378432	3300022726	Soil	DVLSVSAFLQWTQTTKVQLADVTKLLPPYAASYDPTSVSNMGEVNTKLGLTGAGGGFYNPADPEQP
Ga0208690_10542342	3300025434	Peatland	LASLTKTLPPYALTYDPTDIANLGKVLGQLGIGGAGGGYYNPNDPEQP
Ga0208589_10254351	3300025634	Arctic Peat Soil	LPPYAASYDPTTLNNLGAVNVKLGLVGSGGGYYNPADPEQP
Ga0207699_101951312	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DVTKILPPYALTYDPTIIPVGKVNEELGLTSAGGGYYNPADPEQP
Ga0207699_104702002	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PPYALTYDPTNIPAGKINQELGLTSAGGGYYNPADPEQP
Ga0207671_111798532	3300025914	Corn Rhizosphere	DFQAWTQATAVKMASVTKILPPYALTYDPTTIPAGKVNQALGLTSAGGGYYNPADPEQP
Ga0207700_100395295	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YALTYDPTVLANVGKVNEELGLTSAGGGYYNPADPVQP
Ga0207664_108168351	3300025929	Agricultural Soil	SLTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPVQP
Ga0207676_116857691	3300026095	Switchgrass Rhizosphere	SGFMAWTQATAVKMASVTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0208240_10135472	3300027030	Forest Soil	KLLPPYALTYDPTTIANLGKVNQQLGLTGAGGGFYNPADPEQP
Ga0208725_10487052	3300027158	Forest Soil	AKTTEVQLASVTKILPPFALTYDPTAIKTLGPVLVKLGLTGAGGGFYGPQVPVQP
Ga0208241_10053511	3300027297	Forest Soil	ASVTKLLPPYALTYDPTTIAILGKVNTALGLTGAGGGFYNPADPEQP
Ga0209330_10083551	3300027619	Forest Soil	PPYALTYDPTNIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0209007_10395363	3300027652	Forest Soil	WAHQTETQLASLTKILPPYALTYDPTVIPNIGKVLVQLGITSAGGGYYNPNDPEQP
Ga0209007_10601382	3300027652	Forest Soil	PAFLQWTQTTKVSLAALTKILPPYALTYDPTTIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0209178_12812422	3300027725	Agricultural Soil	MASVTKILPPYALTYDPTTIPAGKVNQALGLTSAGGGYYNPADPEQP
Ga0209693_100496582	3300027855	Soil	PYALTYDPTGIANLGKVLVQLGIGGAGGGYYPPNDPEQP
Ga0209693_101038451	3300027855	Soil	LPPYALTYDPTVIPNIGKVLVQLGITSAGGGYYNPSDPEQP
Ga0209693_101785651	3300027855	Soil	MTPPPGTEVDETRQTANVTGEVLSDANFMAWTKSEAVKLASVTKMLPPYALTYDPTVLANVGAVNTALGLTSAGGGYYNPADPEQP
Ga0209275_103736402	3300027884	Soil	LTYDPTVIPVIGKVLVQLGITSAGGGYYSPNDPEQP
Ga0209624_107854852	3300027895	Forest Soil	QETKVSLAALTKILPPYALTYDPTNIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0302232_104683312	3300028789	Palsa	KILPPYALTYDPTNIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0222749_106020451	3300029636	Soil	EIQLASLTKLLPPYALTYDPTSINLGKINQQLGLTGAGGGFYNPADPEQP
Ga0311368_100124171	3300029882	Palsa	PPYALTYDPTDIANLGKVLVQLGIGGAGGGYYPPNDPEQP
Ga0311339_105102222	3300029999	Palsa	VTKMLPPYAATYDPTDIASLGKVLVQLGIGGAGGGYYNPNDPEQP
Ga0302177_106428312	3300030053	Palsa	TWTQTTKVQLAALTKILPPYALTYDPTTIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0302177_106965471	3300030053	Palsa	AFLKWTQTTKVQLAAVTKILPPYALTYDPTNIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0302183_100914552	3300030509	Palsa	TYDPTDIATLGKVLVQLGIGGAGGGYYNPNDPEQP
Ga0311372_110093362	3300030520	Palsa	ILPPYALTYDPTNIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0311372_120058071	3300030520	Palsa	FQTWAQQTETQLASVTKMLPPYAATYDPTDIANLGKVLVQLGIGGAGGGYYNPLDPEQP
Ga0311372_127102741	3300030520	Palsa	PAFLAWAQSTRVQLADVTKLLPPYAATYDPTTISTLGAVNTKLGLVGAGGGYYNPADPEQ
Ga0210271_110421931	3300030545	Soil	PPYAPTYDPTVISDLGKVNTELGLTGAGGGYYNPADPVQP
Ga0210252_104877092	3300030548	Soil	YAMTYDPTVIPAIGKVLVQLGITGAGGGYYNPNDPEQP
Ga0311355_109505191	3300030580	Palsa	VQLAAVTKILPPYALTYDPTNIPAGKINTALGLTSAGGGYYNPADPEQP
Ga0210287_10775051	3300030598	Soil	TGQVMTDSNFLAWTRATAVKLADVTKLLPPYADSYDPTTVSTLGKVNVKLGLVGAGGGYYNPADPEQP
Ga0210268_10133761	3300030629	Soil	LTKILPPYAMTYDPTVIPAIGKVLVQLGITGAGGGYYNPNDPEQP
Ga0307482_11415881	3300030730	Hardwood Forest Soil	ATKLAGVTKLLPPYALTYDPTTLNLGKVNTALGLTGAGGGFYNPADPEQP
Ga0265459_104866691	3300030741	Soil	AHQTEIKLASLTKILPPYAMTYDPTVIPAIGKVLVQLGITGAGGGYYSPNDPEQP
Ga0302314_115943362	3300030906	Palsa	TDSNFLAWTKASAVKLAAVTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0170824_1040651221	3300031231	Forest Soil	ILPPYAATYDPTNIPAGKINQALGLTSAGGGFYNPADPEQP
Ga0170824_1121141951	3300031231	Forest Soil	PYALTYDPTSLNLGKVNAALGLTGSGGGFYNPADPEQP
Ga0302324_1010901502	3300031236	Palsa	PPYAMTYDPSDIASLGKVLVQLGIGGAGGGYYPPNDPEQP
Ga0302324_1033850981	3300031236	Palsa	ATSFVAWAQQTKTQLAAVTKLLPPYAPTYDPTMISDLGKVNTELGLTGAGGGYYNPADPVQP
Ga0265339_100137945	3300031249	Rhizosphere	TKTKLAGLTKILPPYALTYDPTTIPAGKINEELGLTSAGGGFYNPADPEQP
Ga0310686_1111012522	3300031708	Soil	PAFLNWTQATKVQLAAVTKILPPYALTYDPTNIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0310686_1122745051	3300031708	Soil	LASVTKMLPPYALTYDPTDIASLGKIFSQLGIGGAGGGYYSPNDPEQP
Ga0310686_1156704841	3300031708	Soil	PAAFQAWAQQTRTQLASVTKMLPAYAMTYDPTDVATLGKVLVQLGIGGAGGGYYSPNDPEQP
Ga0307476_105001182	3300031715	Hardwood Forest Soil	VLTDSNFMAWTQTESAKLASVTKLLPPYALTYDPTTIAILGKVNTALGLTGAGGGFYNPADPEQP
Ga0318508_10463411	3300031780	Soil	QLAAVTKLLPPYALTYDPTSLNLGKINQQLGLTGAGGGYYNPADPEQP
Ga0318520_100900271	3300031897	Soil	ALTYDPTALSNMGKVNQQLGLTGAGGGYYNPADPEQP
Ga0318545_101354062	3300032042	Soil	LADVTKLLPPYALTYDPTALANMGKVNQQLGLTGAGGGYYNPADPEQP
Ga0318504_100279102	3300032063	Soil	LAAVTRLLPPYALTYDPTSLSNMGKVNQQLGLTGAGGGYYNPADPEQP
Ga0318553_106307482	3300032068	Soil	AHATAIQLADVTKLLPPYALTYDPTALANMGKVNQQLGLTGAGGGYYNPADPEQP
Ga0326631_1136362	3300032072	Soil	KLLPPYAVTYDPTVVNSMGAVNTKLGLTGAGGGYYNPADPEQP
Ga0348332_120801872	3300032515	Plant Litter	KTQLADVTKLLPPYALTYDPTVVNSMGKVNAALGLTGAGGGFYNPADPEQP
Ga0335078_116102111	3300032805	Soil	LPPYALTYDPTTIPAGKINEELGLTSAGGGFYNPADPEQP
Ga0335074_110356951	3300032895	Soil	KLLPPYALTYDPTTLTNVGKVNQQLGLTSAGGGYYNPADPEQP
Ga0335074_112508672	3300032895	Soil	NYGRVVTPAQFMAWARATRIRLASVTRLLPPYATTYDPTTIKTLGPVLTKLGLTGAGGGFYASPPDPSAP
Ga0335074_114302151	3300032895	Soil	FMTWARSTEIQLAAVTKLLPPYALTYDPTVISNLGKVNQQLGLTGAGGGYYNPADPEQP
Ga0335074_115399892	3300032895	Soil	FMAWTKATAIKMASVTKLLPPYALTYDPTTIPAGAVNQALGLTSAGGGYYNPADPEQP
Ga0335072_110253391	3300032898	Soil	YALTYDPTSIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0335072_116167382	3300032898	Soil	KATAIKMASVTKLLPPYALTYDPTTIPAGPINQALGLTSAGGGYYNPADPEQP
Ga0335083_103322412	3300032954	Soil	LTYDPTVLANVGKVNQELGLTSAGGGYYNPADPEQP
Ga0335073_113063941	3300033134	Soil	SVADFMKWTQTSKVQLAALTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP
Ga0335077_105365662	3300033158	Soil	TKMLPPYALTYDPTVLANVGKVNQELGLTSAGGGYYNPADPEQP
Ga0310811_108659722	3300033475	Soil	KMASVTKILPPYALTYDPTTIPAGKINQALGLTSAGGGYYNPADPEQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences