Metagenome / Metatranscriptome Family F036844

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036844
Family Type	Metagenome / Metatranscriptome
Number of Sequences	169
Average Sequence Length	84 residues
Representative Sequence	PPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Number of Associated Samples	129
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.80 %
% of genes near scaffold ends (potentially truncated)	63.31 %
% of genes from short scaffolds (< 2000 bps)	60.36 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.213 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.030 % of family members)
Environment Ontology (ENVO)	Unclassified (49.112 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.521 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.71% β-sheet: 8.25% Coil/Unstructured: 68.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF00501	AMP-binding	40.24
PF00248	Aldo_ket_red	11.83
PF00496	SBP_bac_5	6.51
PF13193	AMP-binding_C	6.51
PF10014	2OG-Fe_Oxy_2	6.51
PF13468	Glyoxalase_3	1.78
PF09865	DUF2092	1.18
PF04909	Amidohydro_2	1.18
PF00296	Bac_luciferase	1.18
PF02597	ThiS	1.18
PF00691	OmpA	1.18
PF13532	2OG-FeII_Oxy_2	0.59
PF13561	adh_short_C2	0.59
PF08352	oligo_HPY	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	1.18
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	1.18
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.18

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.21 %
Unclassified	root	N/A	43.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.21 %
Unclassified	root	N/A	43.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.21 %
Unclassified	root	N/A	43.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.95 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.02 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.47 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.47 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.18 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.02 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	9.47 %
Belnapia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	0.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.02 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	3.55 %
Belnapia rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia rosea	0.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.02 %
Granulicella sp. WH15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	2.96 %
Granulicella sp. L60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	0.59 %
Belnapia rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia rosea	0.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10084156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300004082\|Ga0062384_101053824	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300005172\|Ga0066683_10571539	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300005181\|Ga0066678_10305754	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005332\|Ga0066388_104518000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300005434\|Ga0070709_11171475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300005435\|Ga0070714_100419298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1268	Open in IMG/M
3300005556\|Ga0066707_10788244	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005610\|Ga0070763_10080424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1611	Open in IMG/M
3300005764\|Ga0066903_102907921	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005764\|Ga0066903_104150507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300006175\|Ga0070712_100187913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1614	Open in IMG/M
3300010047\|Ga0126382_11258136	Not Available	666	Open in IMG/M
3300010048\|Ga0126373_10494632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300010048\|Ga0126373_11713888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	692	Open in IMG/M
3300010358\|Ga0126370_11538101	Not Available	634	Open in IMG/M
3300010360\|Ga0126372_12182454	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300010362\|Ga0126377_12073618	Not Available	645	Open in IMG/M
3300011120\|Ga0150983_15179274	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300012206\|Ga0137380_10792858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	818	Open in IMG/M
3300012350\|Ga0137372_11225275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300012361\|Ga0137360_11766320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300012917\|Ga0137395_10992456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300012922\|Ga0137394_11127138	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012971\|Ga0126369_12966647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300016270\|Ga0182036_11660481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300016422\|Ga0182039_10078967	All Organisms → cellular organisms → Bacteria → Proteobacteria	2357	Open in IMG/M
3300016422\|Ga0182039_10342314	Not Available	1253	Open in IMG/M
3300016422\|Ga0182039_10584519	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300016422\|Ga0182039_11197037	Not Available	686	Open in IMG/M
3300016445\|Ga0182038_10498223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	1039	Open in IMG/M
3300020581\|Ga0210399_10003622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	12021	Open in IMG/M
3300020581\|Ga0210399_10131829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2057	Open in IMG/M
3300020581\|Ga0210399_11193789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300020582\|Ga0210395_10701829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300021088\|Ga0210404_10682452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300021168\|Ga0210406_10282002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1355	Open in IMG/M
3300021171\|Ga0210405_10522276	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300021171\|Ga0210405_11268676	Not Available	542	Open in IMG/M
3300021180\|Ga0210396_10566420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	990	Open in IMG/M
3300021377\|Ga0213874_10299879	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300021405\|Ga0210387_10013168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia rosea	6371	Open in IMG/M
3300021407\|Ga0210383_10460221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300021407\|Ga0210383_10895473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	756	Open in IMG/M
3300021420\|Ga0210394_10877185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300021432\|Ga0210384_10907958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300021441\|Ga0213871_10050547	Not Available	1138	Open in IMG/M
3300021444\|Ga0213878_10433994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300021478\|Ga0210402_10506980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1120	Open in IMG/M
3300021478\|Ga0210402_11127761	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300021559\|Ga0210409_11634106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300021560\|Ga0126371_10281535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1785	Open in IMG/M
3300021560\|Ga0126371_11432300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	821	Open in IMG/M
3300022528\|Ga0242669_1123295	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300022724\|Ga0242665_10066149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1001	Open in IMG/M
3300025906\|Ga0207699_10385732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	995	Open in IMG/M
3300025915\|Ga0207693_10490535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300025922\|Ga0207646_10570803	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300026557\|Ga0179587_10082023	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300027174\|Ga0207948_1007391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1254	Open in IMG/M
3300027603\|Ga0209331_1122988	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300027701\|Ga0209447_10017177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2046	Open in IMG/M
3300027783\|Ga0209448_10167187	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300027855\|Ga0209693_10074382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1676	Open in IMG/M
3300027903\|Ga0209488_10482870	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300028047\|Ga0209526_10209219	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300031469\|Ga0170819_13865464	Not Available	650	Open in IMG/M
3300031545\|Ga0318541_10046466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2214	Open in IMG/M
3300031549\|Ga0318571_10458569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300031564\|Ga0318573_10272032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	905	Open in IMG/M
3300031679\|Ga0318561_10063529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1877	Open in IMG/M
3300031679\|Ga0318561_10706449	Not Available	554	Open in IMG/M
3300031724\|Ga0318500_10073858	All Organisms → cellular organisms → Bacteria → Proteobacteria	1504	Open in IMG/M
3300031744\|Ga0306918_10467637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300031747\|Ga0318502_10250697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1033	Open in IMG/M
3300031748\|Ga0318492_10722106	Not Available	534	Open in IMG/M
3300031751\|Ga0318494_10502966	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031764\|Ga0318535_10082024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1394	Open in IMG/M
3300031768\|Ga0318509_10117372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1448	Open in IMG/M
3300031770\|Ga0318521_10330373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300031782\|Ga0318552_10381880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	718	Open in IMG/M
3300031782\|Ga0318552_10386962	Not Available	713	Open in IMG/M
3300031819\|Ga0318568_10687869	Not Available	636	Open in IMG/M
3300031823\|Ga0307478_11718204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	517	Open in IMG/M
3300031832\|Ga0318499_10131676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	974	Open in IMG/M
3300031835\|Ga0318517_10095817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1298	Open in IMG/M
3300031846\|Ga0318512_10196483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	985	Open in IMG/M
3300031860\|Ga0318495_10056476	Not Available	1742	Open in IMG/M
3300031860\|Ga0318495_10323282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	685	Open in IMG/M
3300031880\|Ga0318544_10130822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	956	Open in IMG/M
3300031897\|Ga0318520_10111054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1551	Open in IMG/M
3300031897\|Ga0318520_10316732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	942	Open in IMG/M
3300031897\|Ga0318520_10600763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300031897\|Ga0318520_10956176	Not Available	540	Open in IMG/M
3300031912\|Ga0306921_11014945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	935	Open in IMG/M
3300031912\|Ga0306921_12340303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M
3300031942\|Ga0310916_10087066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2482	Open in IMG/M
3300031946\|Ga0310910_10548244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300031946\|Ga0310910_11271158	Not Available	569	Open in IMG/M
3300031947\|Ga0310909_10949858	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031959\|Ga0318530_10031928	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300032001\|Ga0306922_11762808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	611	Open in IMG/M
3300032001\|Ga0306922_12029012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300032010\|Ga0318569_10022027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2572	Open in IMG/M
3300032035\|Ga0310911_10084328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1719	Open in IMG/M
3300032041\|Ga0318549_10475778	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300032054\|Ga0318570_10417647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	612	Open in IMG/M
3300032067\|Ga0318524_10387233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300032089\|Ga0318525_10687614	Not Available	521	Open in IMG/M
3300032091\|Ga0318577_10012011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3434	Open in IMG/M
3300032091\|Ga0318577_10112253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.82%
Host-Associated	Host-Associated	1.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.49%
Aquatic	Environmental → Aquatic	5.33%
Plants	Host-Associated → Plants	1.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.90%
Freshwater	Environmental → Aquatic → Freshwater	5.33%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.59%
Roots	Host-Associated → Plants → Roots	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.25%
Loam	Environmental → Terrestrial → Soil → Loam	10.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.73%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.55%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.18%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.59%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.59%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.59%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100841561	3300003218	Bog Forest Soil	TPGAVAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLHAVPGVRVEPQRVLVPAAAAFNTVLVFSE*
JGI26341J46601_100535201	3300003219	Bog Forest Soil	GLFRDLFGAEAVADRDGRQVIVAGTTQVELAPPNAVAFEFGEAAAEPAGRGEYMAALGIRVRSLPEAAQRLRAVPGIRAEPQRLVVPAGAAFNTAIVFSE*
Ga0062384_1006972942	3300004082	Bog Forest Soil	RDLFGGDAVTDRDGRCVMTAGTAQVEFATPNAVMAEFGEAAAEPAGRAEYMAALGIRARSLPETARRLSSAPGVRVEPRRVLVPASAAFNTAIVFSE*
Ga0062384_1010538241	3300004082	Bog Forest Soil	LALPNMVAAEFGEAAAEPAGRAEYMAVLGIKVRSLRETAQLLRPVSGVRVEVQRLVVPAAAAFNTTLVFSE*
Ga0066683_105715391	3300005172	Soil	GTAQVELATPSIVAAEFGEAAVPAGRAEYMAALGIKVRSLPEAARHLSTVRGIRREPHRLIVPAASAFNTTIVFSE*
Ga0066678_103057542	3300005181	Soil	ELVPPNIVAAEFGGAAAEPVGRAEYMAALEIRVRSLPEAAERLRAVPGVRAEPRRLVVPAAAAFNTTLMLAE*
Ga0066388_1045180001	3300005332	Tropical Forest Soil	GGRVVAAGGVQVELSTPDTIAGEFGEAAAQASGRAEYMAALGIKVRSLPEAERCLRSVPGLRIETDRLIVPADAAFNTAIVFSE*
Ga0070709_111714753	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SQLELSTPDMVAAEFGEAAADPAGRAEYMAALGIGVGSLHEAEQCLRSVRGLRVEPHRLVVPAGAAFNTVIAFSE*
Ga0070714_1004192981	3300005435	Agricultural Soil	MVAAEFGEAAADPVGRAEYMAALGIRVGSLHEAEQCLRSVQALRVEPHRLVVPAGAAFNTAIAFSE*
Ga0066692_105418582	3300005555	Soil	AVAGRDGRQVMAAGTAQIELVPPDIVAAEFGGAAAEPVGRTEYMAALEIRVRSLPEAAERLRAVPGVRAEPRRLVVPAAAAFNTTLMLAE*
Ga0066707_107882441	3300005556	Soil	FGGAAAEPVGRAEYMAALEIRVRSLPEAAERLRAVPGVRAEPRRLVVPAAAAFNTTLMLAE*
Ga0070763_100804242	3300005610	Soil	SAQVELATPEAVQAEFGDAAANPAGRTEYMAALGIRVRSLPAAEQCLRSVPGLRVEPHRLVVPADAAFNTAIAFSE*
Ga0066903_1002591085	3300005764	Tropical Forest Soil	MAAGTARVELASPDVVAEEFAAAAAEPAGRTEYMAVLAIKVLSLADATDRLRVVPGMRAETHRLVVPAHGAFNTTIVFAE*
Ga0066903_1029079211	3300005764	Tropical Forest Soil	LTAGAGRVELVTPQAAAVEFADAAAEPAGRSEYMAALGVRVRSLPEAARHLSPVSGLRIEPHRLIVPAAAAFNTTLVLTE*
Ga0066903_1041505071	3300005764	Tropical Forest Soil	PAAVAAEFGDAASKPAGRAEYMAALGIKVLSLASTTDRLRAVPGLNAEARRLVVPAGIAFNTTVVFAE*
Ga0066903_1050447923	3300005764	Tropical Forest Soil	DPHRTAGLFRDLFGGDAVAEDNGRHTMTAGTAEVELVPPNMLGAEFGEAAAEPAGRAEYMAALGLKVRSLREAEHLLRPISAVRTQPQRLVVPAAAAFNTTIVFSE*
Ga0070712_1001879132	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PDAVAAEFGEAAAEAAGRTEHMAALGIRVRSLHEAGQYLRSVPGLRVERHRLVVPAGAAFNTVIAFSE*
Ga0066709_1000875901	3300009137	Grasslands Soil	TADPQRTAALFRDLFGHDAVAGRDGRQVMAAGTAQIELVPPDIVAAEFGEAAAEPVGRTEYMAALEIRVRSLPEAAERLRAMPGVRTEPRRLVVPAAAAFNTTLMLAE*
Ga0126382_112581362	3300010047	Tropical Forest Soil	ILTAGTARVELCTPDAVATEFGTAAAEPAGRTEYMAVLGIRVQSLHDTGQCLRSVSGLRAEPHRLVVPAKDAFNTTIVFAE*
Ga0126373_104946322	3300010048	Tropical Forest Soil	ALPNMVAAEFGEAAAEPAGRVEYMAVLGIKVWSLRETAQQLRQVSGVRAEPHRLVVPAAAAFNTTIVFSE*
Ga0126373_117138881	3300010048	Tropical Forest Soil	FGEMAAEASGRAEYMAVLGLKVASLGAAAQQLRGVPDVRIEPQRVVVSAAGAFNTTIVFTE*
Ga0127503_106336652	3300010154	Soil	AIARVVVATDDPGRTAALFRDLFGGDAVTERDRRQAMTTGTAQVELAPPNMVAAEFGETAAEPAGRAEYMAALVIRVRSLHETGQQLRQVPGIRVDPRRLLVPAAAAFNTTIVFSE*
Ga0126370_115381012	3300010358	Tropical Forest Soil	MAAGTAQVEFALPNMVAAEFGEAAAEPAGRVEYMAVLGIKVWSLHETAQQLRQVSGVRAEQHRLVVPAAAAFNTTIVLSE*
Ga0126376_129908692	3300010359	Tropical Forest Soil	FRDLFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGISVRSLREAAQRLRAVPGVRIEPQRLVVPAAAAFNTTIVFSE*
Ga0126372_121824541	3300010360	Tropical Forest Soil	EAAAEPAGRAEYMAALGIKVASLPEATRRLSTVPDILTEPHRLIVPARAAFNTTIVFSE*
Ga0126378_127199592	3300010361	Tropical Forest Soil	DLFGGDAVADHAGQWVMAAGTARVELVTPDLVAAEFGEAAAEPAGRAEYMAALGIKVASLSEATRRLSTVPDILTEPHRLIVPASAAFNTTIVFSE*
Ga0126377_120736181	3300010362	Tropical Forest Soil	RHVVNVGTAQVELTQPNIVAAEFGEAAAKPAGRTEYMAALGIKVRALHETEQHLRQVPGIKAEPRRLVVPAAAAFNTTIMFSE*
Ga0126381_1016672641	3300010376	Tropical Forest Soil	ATLFRSLFGGDAVTDREGRHVVHVGTAQVELTQPNIVAAEFGEAAAKPAGRTEYMAALGIKVRSLHETEQQLLQVPSVKAEPRRLVVPAAAAFNTTIMFSE*
Ga0150983_125152311	3300011120	Forest Soil	PLRTAVLFRDLFGGNAVTDQEGRCVMAAGTAQVELAPPNVVSAEFGEAAAQPAGRSEYMAALGIKVRSLPATAQRLRSVQGVHAEPHRLLVPASAAFNTTIVFSE*
Ga0150983_151792742	3300011120	Forest Soil	LSTPDAVVAEFGTAAAQPSGRAEYMAVLGVRVRSLPEAEESLRSVPGLRVDPHRLVVPANAAFNTAIAFSE*
Ga0137363_114567491	3300012202	Vadose Zone Soil	TRVMVASADPPRAAMLFRDLFGGDAVADRDGRQVMTAGTAQVELVAPDVVAAEFGEAAAEPAGRGVYMAALGIKVRSLPAAAQQLRSLQGVHLEPHRLVVPAGMAFNTTIVFSE*
Ga0137362_113743831	3300012205	Vadose Zone Soil	SADPPRTAVLFCDLFGGDAVAGRDGRQVLTAGTAQVELVAPDVVAAEFGEAAAEPVGRAEYMAALGIRVRSLPAAAQQLRSVQGVRVEPHRLVVPAGVAFNTTILFSE*
Ga0137380_107928581	3300012206	Vadose Zone Soil	AEFGEAAAEPAGRAEYMAALGVRVRSLSEAAQSLRAVPGVRVEPQRLVVPATAAFNTTLVFSE*
Ga0137372_112252752	3300012350	Vadose Zone Soil	VAVHDGRQVMVSGTAQVELATPSIVAAEFGEAAVPAGRAEYMAALGIKVRSLPEAARHLSTVRGIRREPHRLIVPAASAFNTTIVFSE*
Ga0137360_117663202	3300012361	Vadose Zone Soil	DRDGRQVMTAGTAQVELVAPDVVAAEFGEAAAEPVGRAEYMAALGIRVRSLPAAAQQLRSVQGVRVQTHRLVVPAGVAFNTTVLFSE*
Ga0137395_109924562	3300012917	Vadose Zone Soil	MAAGTAQVEIVAPDVVAAEFGEAAAEPVGRAEYMAALGIRVRSLPAAEQLLHSVRGVRVEPHRLVVPAAAAFNTTIVFSE*
Ga0137394_111271382	3300012922	Vadose Zone Soil	AQVELVPPNIVAAEFGGAAAEPVGRAEYMAALEIRVRSLPEAAERLRAVPGVRAEPRRLVMSTAAAFNTTLMLSE*
Ga0126369_129666471	3300012971	Tropical Forest Soil	IAESDWRQMLTAGAGRVELITPQAAAVEFADAAAEPAGRSEYMAALGVRVRSLPEAARHLSPVSGLRIEPHRLIVPAAAAFNTTLVFTE*
Ga0182036_100680741	3300016270	Soil	TAVLFRDLFGGASVAEHDGRHVMTAGAAQVELVSPNTIAGEFGEEAAEPAGRAEYMAVLEIRVSSLRDAAQRLRGIAGVRIEPQRLVVPAAAAFNTTIVFSE
Ga0182036_116604812	3300016270	Soil	DGRQVMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0182041_122942012	3300016294	Soil	NGACAITRVVVGTADPQRTAVLFRDLFGADAVTNRDGRQMMTAGTAEVELAPPNMVAAEFAEAAAEPAGRAEYMAALGIRVQSLREATQRLRTVPGVRAEPQQLVVPAAAAFNTTIVFSE
Ga0182033_103942652	3300016319	Soil	ALTRVVVATGDPQATAKLFRDLFGGDAVAERDGRQVMIAGRAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0182033_116417611	3300016319	Soil	DVVAERDGRQVMMAGTAQVELALPNMVAAEFGEVAAEPAGRAEYMAALGIKVRSLREAAQRLGAVPGVRVETRRLVVPAAAAFNTTLVFSE
Ga0182039_100789675	3300016422	Soil	LVSPNTIAGEFGEEAAEPAGRAEYMAVLEIRVSSLRDAAQRLRGIAGVRIEPQRLVVPAAAAFNTTIVFSE
Ga0182039_103423141	3300016422	Soil	TPDMVAAEFGEAGAEAAGHAEYMAALGLKVGSLAAAAQQLRGVPGLRIEPQRLVVPAASAFNATIVFTE
Ga0182039_105845193	3300016422	Soil	AERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRVVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0182039_111970371	3300016422	Soil	AEFAEAAAESSGRAEYMAALGIRVRSLREAVRMLGAIAGVRVEPQRLVVPAAAAFNTTLVFSE
Ga0182039_112277392	3300016422	Soil	FGSDVVAERDGRQVMMAGTAQVELAVPNRVAAEFGEAAAEPAGRAEYMAALEIKVRSLREAAQLLRPISGVRVEAQRLVVPAIAAFNTTIVFSE
Ga0182038_104982231	3300016445	Soil	TAQVELALPNMVAAEFGEVAAEPAGRAEYMAALGIKVRSLREAAQRLGAVPGVRVETRRLVVPAAAAFNTTLVFSE
Ga0210403_115026572	3300020580	Soil	TAVLFRDLFGSDAVADRDGRQLMTAGTAQVELVPPNIVAAEFGETAAEPVGRAEYIAALEIRVRSLPVAAQQLHSVQSVRVEPDRLVVPACVAFNTTIVFSE
Ga0210399_100036221	3300020581	Soil	AGTAQVELAPPNVVSAEFGEAAAQPAGRSEYMAALGIKVRSLPATAQRLRSVQGVHAEPHRLLVPASAAFNTTIVFSE
Ga0210399_101318291	3300020581	Soil	RNWAQIIAAGAAQVELSTPDAVAAEFGETAAEAAGRTEHMAALGIRVRSLHEAGRCLRSVPGLHVERHRLVVPAGAAFNTAIAFSE
Ga0210399_111937891	3300020581	Soil	EIVADRNGAQIIAAGAAQVELSTPDAVAAEFGETAAEAAGRTEHMAALGIRVRSLHEAGQCLRSVPGLHVERHRLVVPAGAAFNTAIAFSE
Ga0210395_107018292	3300020582	Soil	FGAEAIADRDGSQILSAGTAQVELSTPDMIAAEFGETAAQPSGRTDYMAALEIRVRSLPATAQCLRSVPGLRVEPHRLVVPADAAFNTAIAFSE
Ga0210401_105678191	3300020583	Soil	ATADPQRTAVLFRDLFGSDAVADRDGRQLMTAGTAQVELVPPNIVAAEFGETAAEPVGRAEYIAALEIRVRSLPAAAQQLHSVQSVRVEPDRLVVPACVAFNTTIVFSE
Ga0210404_106824522	3300021088	Soil	EAAAEAAGRTEHMAALGIRVRSLHEAGQYLRSVPGLRVERHRLVVPAGAAFNTVIAFSE
Ga0210406_102820021	3300021168	Soil	ETAADAAGRTEHMAALGIRVRSLHEAGQCLRSVPGLHVEPHRLVVPAGAAFNTAIAFSE
Ga0210405_105222761	3300021171	Soil	EFGETAAQPSGRTDYMAALEIRVRSLPATAQCLRSVPGLRVEPHRLVVPADAAFNTAIAFSE
Ga0210405_112686761	3300021171	Soil	EFGEAAAQPLGRTEYMAALEIRVRSLPKAGECLRSVPRLRVEPHRLVVPASAAFNTAIAFSE
Ga0210408_112800111	3300021178	Soil	DLFGGDAVTERDGRQVMTAGTAQVEFALPNMVAAEFGEAAAEPAGRGEYMAALGIKVRSLHKTEQQLSRIPGIKVDPRRLLVPAAGAFNATIVLSE
Ga0210396_105664201	3300021180	Soil	RETIIAAGTAQVELTITDAITAEFGEAAAQPLGRTEYMAALEIRVRSLPKAGECLRSVPRLRVEPHRLVVPASAAFNTAIAFSE
Ga0213874_102998792	3300021377	Plant Roots	AGAAQVELSMPDIVTAEFGEMAAQPAGRAEYMAALEIRVRSLREAEQCLRSVAALRVQPHRLVVPAGAAFNTAIAFSE
Ga0210393_101992653	3300021401	Soil	NPLRTAVLFRDLFGGNAVTDQEGRCVMAAGTAQVELAPPNVVSAEFGEAAAQPAGRSEYMAALGIKVRSLPATAQRLRSVQGVHAEPHRLLVPASAAFNTTIVFSE
Ga0210387_100131681	3300021405	Soil	AAGTAQVELAPPNVVSAEFGEAAAQPAGRSEYMAALGIKVRSLPATAQRLRSVQGVHAEPHRLLVPASAAFNTTIVFSE
Ga0210387_115799081	3300021405	Soil	LFGSDTVTDREGRHVMTAGTAQVELTPPNMVVAEFGEAAAEPGGRAEYMAALGITVRSLHETEQQLRQVPSVKAEPRRLVVPAAVAFNTTIVFSERAVSRTS
Ga0210386_115425821	3300021406	Soil	RVVVATDDPRRTAELFRDLFGGDAVTERDGRQVMTAGTAQVEFALPNMVAAEFGEAAAEPAGRGEYMAALGIKVRSLHKTEQQLSRIPGIKVDPRRLLVPAAGAFNATIVLSE
Ga0210383_104602212	3300021407	Soil	EIVADRNWAQIIAAGAAQVELSTPDAVAAEFGETAAEAAGRTEHMAALGIRVRSLHEAGRCLRSVPGLHVERHRLVVPAGAAFNTAIAFSE
Ga0210383_108954732	3300021407	Soil	TAQVELTITDAITAEFGEAAAQPLGRTEYMAALEIRVRSLPKAGECLRSVPRLRVEPHRLVVPASAAFNTAIAFSE
Ga0210394_108771852	3300021420	Soil	TPDAVAAEFGEAAAEAAGRTEHMAALGIRVRSLHEAGQYLRSVPGLRVERHRLVVPAGAAFNTVIAFSE
Ga0210384_109079582	3300021432	Soil	IADRDGSQILSAGTAQVELSTPDMIAAEFGETAAQPSGRTDYMAALEIRVRSLPATAQCLRSVPGLRVEPHRLVVPADAAFNTAIAFSE
Ga0213871_100505472	3300021441	Rhizosphere	ELSTPGVIAAEFGDTAAEAASRTEYMAVLGIRIRSLPEAERCLRSFRGLRVEPQRLVVPADAAFNTTIVFSE
Ga0213878_104339941	3300021444	Bulk Soil	AVAEHDGRRVMTAGTARVELVQPNMIVAEFGEAAAEPAGRAEYMAALGIKVRSLREAAQMLRAVAGLRVEPQRLIVPAAAAFNTTIVFSE
Ga0210402_105069802	3300021478	Soil	ADRNWAQIIAAGAAQVELSTPDAVAAEFGETAAEAAGRTEHMAALGIRVRSLHEAGRCLRSVPGLHVERHRLVVPAGAAFNTAIAFSE
Ga0210402_111277612	3300021478	Soil	MVAAEFDEAAADPAGRSEYMAALEIRVRSLAEAAGRLSAVRGIRGEPHRLILPAGAAFNTTIVFSE
Ga0210410_100045031	3300021479	Soil	QAIARVVVATNNPLRTAVLFRDLFGGNAVTDQEGRCVMAAGTAQVELAPPNVVSAEFGEAAAQPAGRSEYMAALGIKVRSLPATAQRLRSVQGVHAEPHRLLVPASAAFNTTIVFSE
Ga0210409_116341062	3300021559	Soil	DRNWAQIIAAGAAQVELSTPDAVAAEFGETAAEAAGRTEHMAALGIRVRSLHEAGRCLRSVPGLHVERHRLVVPAGAAFNTAIAFSE
Ga0126371_102815353	3300021560	Tropical Forest Soil	AAGTAQVEFALPNMVAAEFGEAVAEPAGRTEYMAALVIRVRSLHETEQQLSRVPGLKVDPRRLLVPAAAAFNTTIVFSE
Ga0126371_114323001	3300021560	Tropical Forest Soil	GRQVVSAGTAQVELTPPDIIKAEFGKAVAEPAGRTEYTAALEIKVRSLRDVGHLLRAIPGVRAEPERLLVPAAAAFNTTIVFSE
Ga0242669_11232951	3300022528	Soil	ATPEAVQAEFGDAAANPAGRTEYMAALGIRVRSLPAAEQCLRSVPGLRVEPHRLVVPADAAFNTAIAFSE
Ga0242665_100661491	3300022724	Soil	AQVELATPDAVAAEFGETAAEAAGRTEHMAALGIRVRSLHEAGRCLRSVPGLHVERHRLVVPAGAAFNTAIAFSE
Ga0207699_103857322	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	QVELSTPDAVAAEFGEAAAEAAGRTEHMAALGIRVRSLHEAGQCLRSVPGLHVERHRLVVPAGAAFNTAIAFSE
Ga0207693_104905352	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	FGEAAAEAAGRTEHMAALGIRVRSLHEAGQYLRSVPGLRVERHRLVVPAGAAFNTVIAFS
Ga0207646_105708031	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	EGRCVMTAGTAQVELVAPDVVTAEFGEAAAEPAGRGQYMAALEIKVRSLPAAAQQLGSVQGVHAEPHRLVVPASAAFNTTIVFSE
Ga0209648_107780581	3300026551	Grasslands Soil	AALFRDLFGDNAAIDRDGRQLVTAGTAQVELVPPNKIEAEFGEAAAEPAGRAEYMAALGIRVRSLSETAQRLRAVPSVRVEPQRLVVPAKAAFNTTLVFSE
Ga0179587_100820234	3300026557	Vadose Zone Soil	VVSAEFGEAAAEPAGRAEYMAALGIKVRSLPATAQRLRSVQVHAEPHRLVVPASAAFNTTIVFSE
Ga0207948_10073912	3300027174	Forest Soil	DAVAAEFGEAAAEAAGRTEHMAALAIRVRSLHEAGQCLRSVPGLHVERHRLVVPAGAAFNTGIAFSE
Ga0209331_11229882	3300027603	Forest Soil	EVELVAPDVVAAEFGEAVAEPVGRAEYMAALGIRVRSLPAAAQQLRCVQGVHVDADRLVVPAGVAFNTTIVFSE
Ga0209447_100171771	3300027701	Bog Forest Soil	GRIIAAGTAQVELSTPDAVTAEFGETAARPAGRAEYMAALEITVRSLAAAGQCLRSLPGLRVEPHRLVVPADAAFNTTIVFSE
Ga0209038_102431211	3300027737	Bog Forest Soil	LFRDLFGGDAVTDRDGRCVMTAGTAQVEFATPNAVMAEFGEAAAEPAGRAEYMAALGIRARSLPETARRLSSAPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0209448_101671871	3300027783	Bog Forest Soil	TQPNNVAAEFGEAAAEPAGRAEYMAALGIRVQSLREATQRLRAVPGVRDEPQRLVVPAAAAFNTTIVFSE
Ga0209040_103900582	3300027824	Bog Forest Soil	DLFGGDAVAEHGGRLVMTAGTAQVELTPPNMIAAEFGEAAAEPAGRAEFMAGLGIRVRSLRETTQRLRAVPGVRAEPRRLMLPASAAFNTTIVFSE
Ga0209693_100743822	3300027855	Soil	SAQVELATPEAVQAEFGDAAANPAGRTEYMAALGIRVRSLPAAEQCLRSVPGLRVEPHRLVVPADAAFNTAIAFSE
Ga0209488_104828702	3300027903	Vadose Zone Soil	TAEFGEAAAEPAGRAEYMAALGIKVRSLPETAQRLSTVPAARVAPHRLLVPASAAFNTTIVFSE
Ga0209526_102092191	3300028047	Forest Soil	ADRNGRQVMTAGTAEVELVAPDVVAAEFGEAVAEPVGRTEYMAALGIRVRSLPAAAQQLRSVQGVHVDADRLVVPAGVAFNTTIVFSE
Ga0170819_138654641	3300031469	Forest Soil	RHVMTAGTAQVELTPPNMVVAEFGEAAAEPAGRAEYMAALGITVRSLNETEQQLRQVPSVKAEPRRLVVPAATAFNTTIVFSE
Ga0318541_100464663	3300031545	Soil	VAAEFGAAAAEPAGRTEYMAALGIRVRSLAETEQCLRSIAGLRIEPHRLVVPANAAFNTALLFSE
Ga0318538_104214121	3300031546	Soil	AERDGRQVMMAGTAQVELALPNMVAAEFGEVAAEPAGRAEYIAALGIKVRSLREAAQRLGAVPGVRVETRRLVVPAAAAFNTTLVFSE
Ga0318571_104585691	3300031549	Soil	PPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318528_102887543	3300031561	Soil	LFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRVVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318573_102720322	3300031564	Soil	EFGDAAAEAAGRAEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0310915_103467242	3300031573	Soil	AAAKPAGRGEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0318555_104975781	3300031640	Soil	HPNGASAVARVVVATPDPRRTAKLFDDLFGSDVVAERDGRQVMMAGTAQVELALPNMVAAEFGEVAAEPAGRAEYMAALGIKVRSLREAAQRLGAVPGVRVETRRLVVPAAAAFNTTLVFSE
Ga0318561_100635291	3300031679	Soil	FSTPEAVAAEFGAAAAEPAGRTEYMAALGIRVRSLAETEQCLRSIAGLRIEPHRLVVPANAAFNTALLFSE
Ga0318561_107064491	3300031679	Soil	AGTAQVEFALPNMVAAEFGQAASEPAGRVEYMAVLGIRVWSLHETAQQLRQVSGVRAEPHRLIVPAAAAFNTTIVFSE
Ga0318493_108736481	3300031723	Soil	AHPNTASALTRAVVATGDPQRTAKLFRDLFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318500_100738583	3300031724	Soil	ARTAQVELALPNMVAAEFGEAAAEPAGRAEYMAALEIKVRSLREAAQLLRPISGVRVEARRLVVPAAAAFNTTLVFSG
Ga0306918_104676371	3300031744	Soil	LASPNTIAAEFGEAAPEPAGRAEYMAVLGIRVRSQREAAQRLHSIAGARTEPQRLVVPAAAAFNTTIVFSE
Ga0318502_102506972	3300031747	Soil	AAKPAGRAEYMAVLGIRVRSLRDAAQRLSSVPDVRVEPHRVLVPASAAFNTAIVFSE
Ga0318492_104135021	3300031748	Soil	SIARVVVVTADPSRRAKLLRDLFGGDSVSERDGRQVMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0318492_107221061	3300031748	Soil	GRQVMTTGAAQVELAVSNMVAAEFGEAATEPAGRAEYMAALEIKVRSLREVAQLLHPISGVRIEAQRLVVPATAACNTTLVFSE
Ga0318494_102958002	3300031751	Soil	LFDDLFGSDVVAERDGRQVMMAGTAQVELALPNMVAAEFGEVAAEPAGRAEYMAALGIKVRSLREAAQRLGAVPGVRVETRRLVVPAAAAFNTTLVFSE
Ga0318494_105029661	3300031751	Soil	VELTQPDTVAAEFGEAAAKPAGRAEYMAVLGIRVRSLRDAAQRLSSVPDVRVEPHRVLVPASAAFNTAIVFSE
Ga0318535_100820241	3300031764	Soil	PNTVAAEFGEAAAKPAGRAEYMAVLGIRVRSLRDAAQRLSSVPDVRVEPHRVLVPASAAFNTAIVFSE
Ga0318509_101173721	3300031768	Soil	AEHDGRHVMTAGAAQVELVSPNTIAGEFGEEAAEPAGRAEYMAVLEIRVSSLRDAAQRLRGIAGVRIEPQRLVVPAAAAFNTTIVFSE
Ga0318526_103218152	3300031769	Soil	AEFGEAAADPAGRAEYMAALEIKVRSLRDAAELVRAVSGVRVESPRVIAPAAAVFNTTIVFSE
Ga0318521_103303732	3300031770	Soil	VVAAGTAEVELTQPNTVAAEFGEAAAKPAGRAEYMAALGIRVRSLRDATRRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0318521_108539112	3300031770	Soil	KLFRDLFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318566_102486582	3300031779	Soil	VVATADPPRTALLFRDLFDGDSVSERDGRQVVAAGTAEVELTQPNTVAAEFGEAAAKPAGRGEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0318547_105201531	3300031781	Soil	LFGGDSVSERDGRQVVAAGTAEVELTQPNTVAAEFGEAAAKPAGRAEYMAALGIRVRSLRDATQRLSSVPGVRVEPHRVLVPASAAFNTAIVFSE
Ga0318552_103818801	3300031782	Soil	VELALSNMVAAEFGEAATEPAGRAEYMAALEIKVRSLREVAQLLHPISGVRIEAQRLVVPATAACNTTLVFSE
Ga0318552_103869622	3300031782	Soil	IAAEFAEAAAESSGRAEYMAALGIRVRSLREAVRMLGAIAGVRVEPQRLVVPAAAAFNTTIMFSE
Ga0318503_100591471	3300031794	Soil	SSIARVVVVTADPSRRAKLLRDLFGGDSVSERDGRQVMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0318557_105941732	3300031795	Soil	HPNGASAIARVVVATPDPRRTAKLFDDLFGSDVVAERDGRQVMMAGTAQVELALPNMVAAEFGEVAAEPAGRAEYMAALGIKVRSLREAAQRLGAVPGVRVETRRLVVPAAAAFNTTLVFSE
Ga0318523_101444711	3300031798	Soil	PNTASALTRAVVATGDPQRTAKLFRDLFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVLPAAAAFNTTIVFS
Ga0318568_106878691	3300031819	Soil	QVELALPNMVAAEFGEAAAEPAGRTEYMAALVIRVRSLHETKQLSRVPGIKVDPRRLVVPGAAAFNTTIVFSE
Ga0307478_117182041	3300031823	Hardwood Forest Soil	VELATPEAVQAEFGDAAANPAGRTEYMAALGIRVRSLPAAEQCLSSVPGLRVEPHRLVVPADAAFNTAIAFSE
Ga0318499_101316761	3300031832	Soil	VAAEFGEAGAEAAGHAENIAALGLKVGSLAAAAQQLRGVPGLRIEPQRLVVPAASAFNATIVFTE
Ga0310917_100236621	3300031833	Soil	VATVDPQRTAVLFRDLFGGKAIAERNGRHLVTAGTAVVELVPPNMLVTELGEAAAEPAGRAEYMAALGFKVRSLREAAQPLHSIAGMRTEPQRLVVPAAAAFNTTIVISE
Ga0318517_100958171	3300031835	Soil	GEAAAKPAGRGEYMAALGIRVRSLRDATQRLSSVPGVRVEPQRLIVTAAAAFNTTIVFSE
Ga0318512_101964832	3300031846	Soil	AGTAEVQLTQPNTVAAEFGEAAAKPAGRAEYMAVLGIRVRSLRDAAQRLSSVPDVRVEPHRVLVPASAAFNTAIVFSE
Ga0318495_100564761	3300031860	Soil	ELAPPTMVAAEFGEAAAESSGRAEYMAALGIKIRSLREAARMLGAIAGVRVEPQRLVVPAAAAFNTTIVFSE
Ga0318495_102951421	3300031860	Soil	GASSIARVVVVTADPSRRAKLLRDLFGGDSVSERDGRQVMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0318495_103232821	3300031860	Soil	GEAAAKPAGRAEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0318544_101308223	3300031880	Soil	VELVPPNMLVTELGEAAAEPAGRAEYMAALGFKVRSLREAAQPLHSIAGMRTEPQRLVVPAAAAFNTTIVISE
Ga0318544_102936501	3300031880	Soil	SVSERDGRQVMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0318536_1000078413	3300031893	Soil	PSRRAKLLRDLFGGDSVSERDGRQVMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0318536_101960922	3300031893	Soil	NGASAIARVVVATPDPRRTAKLFDDLFGSDVVAERDGRQVMMAGTAQVELALPNMVAAEFGEVAAEPAGRAEYIAALGIKVRSLREAAQRLGAVPGVRVETRRLVVPAAAAFNTTLVFSE
Ga0318536_105935581	3300031893	Soil	AVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAGYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318520_101110542	3300031897	Soil	HIFGAAAAEPAGRTEYMAALGIRVRSLAETEQCLRSIAGLRIEPHRLVVPANAAFNTALLFSE
Ga0318520_103167322	3300031897	Soil	GRHVMAAGAAQVDLVSPNAIAAEFGEEAAEPAGRAEYMAVLEIRVSSLRDAAQRLRGIAGVRIEPQRLVVPAAAAFNTTIVFSE
Ga0318520_106007631	3300031897	Soil	PNMIAAEFGEAAADPAGRAEYMAALEIKVRSLRDAAVLVRAVSGVRVESRRVVVPAAAAFNTTIVFSE
Ga0318520_109561761	3300031897	Soil	SNMVAAEFGEAATEPAGRAEYMAALEIKVRSLREVAQLLHPISGVRIEAQRLVVPATAACNTTLVFSE
Ga0306921_110149451	3300031912	Soil	ELALPNMVAAEFGEAAAEPAGRAEYMAALEIKVRSLREAAQLLRPISGVRVEARRLVVPAAAAFNTTLVFSG
Ga0306921_123403031	3300031912	Soil	SAEVDLAPPKMIAAEFGGAGAQPAGRVEYMAALEIKVRSLRTAAQRLEAVPGVKAEPQRLVVPAAAAFNTTIVLSE
Ga0310912_103115911	3300031941	Soil	PQQSAMLFHDLFGGDAVADRDGRQVMTTGAAQVELALSNMVAAEFGEAATEPAGRAEYMAALEIKVRSLREVAQLLHPISGVRIEAQRLVVPATAACNTTLVFSE
Ga0310916_100870664	3300031942	Soil	RQVMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0310916_104572981	3300031942	Soil	LTRAVVATGDPQRTAKLFRDLFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0310910_105482441	3300031946	Soil	TQPDTVAAEFGEAAAKPAGRAEYMAVLGIRVRSLRDAAQRLSSVPDVRVEPHRVLVPASAAFNTAIVFSE
Ga0310910_112711581	3300031946	Soil	VELTQPNTVAAEFGEAAAKPAGRAEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0310909_109498581	3300031947	Soil	PPTMVAAEFGEAAAESSGRAEYMAALGIKIRSLREAARMLGAIAGVRVEPQRLVVPAAAAFNTTIVFSE
Ga0318530_100319283	3300031959	Soil	PPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRVVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318531_104791241	3300031981	Soil	RDLFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRAVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0306922_117628082	3300032001	Soil	STPDAVAAEFGAAAAKPAGRTEYLAALGIRVRSLAETKQCLRSVEGLRIDPHRLVVPASAAFNTAFVFAE
Ga0306922_120290123	3300032001	Soil	TPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRVVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318569_100220271	3300032010	Soil	GSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0310911_100843282	3300032035	Soil	FGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFS
Ga0310911_108858852	3300032035	Soil	HPNTASALTRVVVATGDPQRTAKLFRDLFGGDAVAERDGRQVMIAGTAQVELTPPNIIAAEFGEAAAEPAGRAEYMAALGIRVRSLREAAQRLRVVPGVRTEPQRLVVPAAAAFNTTIVFSE
Ga0318549_104757782	3300032041	Soil	YSARPDDSAAEFGEAAAESSGRAEYMAALGIKIRSLREAARMLGAIAGVRVEPQRLVVPAAAAFNTTIVFSE
Ga0318556_104813462	3300032043	Soil	RDLFGGDSVSERDGRQVVAAGTAEVELTQPNTVAAEFGEAAAKPAGRAEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0318532_101949261	3300032051	Soil	RDLFGGASVAEHDGRHVMTAGAAQVELVSPNTIAGEFGEEAAEPAGRAEYMAVLEIRVSSLRDAAQRLRGIAGVRIEPQRLVVPAAAAFNTTIVFSE
Ga0318532_103373641	3300032051	Soil	VVATADPPRTALLFRDLFDGDSVSERDGRQVVAAGTAEVELTQPNTVAAEFGEAAAKPAGRAEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0318570_104176471	3300032054	Soil	EAAEPAGRAEYMAVLEIRVSSLRDAAQRLRGIAGVRIEPQRLVVPAAAAFNTTIVFSE
Ga0318570_105016662	3300032054	Soil	AVLFRDLFGGKAIAERNGRHLVTAGTAVVELVPPNMLIAEFGEAAAEPAGRAEYMAALGIKVRSLREAAQPLHSIAGMRTEPQRLVVPAAAAFNTTIVISE
Ga0318524_103872332	3300032067	Soil	VELTQPNTVAAEFGEAAAKPAGRGEYMAALGIRVRSLRDATQRLSSVPGVRVEPRRVLVPASAAFNTAIVFSE
Ga0318525_106876142	3300032089	Soil	RCEIAAGSVQVELTPPTMVAAEFGDAAAEAAGRAEYMAALGIRVRSLRDATQRLSSVPGVRVEPQRLIVTAAAAFNTTIVFSE
Ga0318577_100120111	3300032091	Soil	PNMLVTELGEAAAEPAGRAEYMAALGFKVRSLREAAQPLHSIAGMRTEPQRLVVPAAAAFNTTIVISE
Ga0318577_101122532	3300032091	Soil	VMTAGSAEVEFALPNSVAGEFGEATAEPAGRAEYMAALGIRVPSLPETAQQLRTIQGVRVEPHRLVVPAAAAFNTTIVFSE
Ga0318540_1000068513	3300032094	Soil	PQRTAILFRDLFGGAAVSERDGRQVMAAGTAEVELTQPNTVAAEFGEAAAEPGERAEYMAALGIRVQSLREATQRLRAVPGVRAERTQLVVPAAAAFNTTIVFSE
Ga0348332_139918451	3300032515	Plant Litter	LFRSLFGDDAVADDNERCIMAAGTARVELAMPDALAAEFGEGAPEPAGRGEYMAALGIKVLSLSNATERLRSVQGLYTEPHRLVVPAAAAFNTTIVFSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036844

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences