Metagenome Family F036747

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F036747
Family Type	Metagenome
Number of Sequences	169
Average Sequence Length	92 residues
Representative Sequence	MPRLTTLSAMKKVLMRGVFVAALTALIGFGATGLAAQGQRLWSIVIHFQYQDGFEFDYVLERGVSTEDMGAALADCGRSHRTGSVVRYHCYPVPE
Number of Associated Samples	125
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.11 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	82.84 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (56.805 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.752 % of family members)
Environment Ontology (ENVO)	Unclassified (40.828 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.40% β-sheet: 22.76% Coil/Unstructured: 39.84%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF07638	Sigma70_ECF	8.28
PF00486	Trans_reg_C	2.37
PF11954	DUF3471	2.37
PF02687	FtsX	1.78
PF12867	DinB_2	1.18
PF08241	Methyltransf_11	1.18
PF00753	Lactamase_B	1.18
PF13709	DUF4159	1.18
PF00593	TonB_dep_Rec	1.18
PF03405	FA_desaturase_2	1.18
PF03551	PadR	1.18
PF02369	Big_1	0.59
PF13443	HTH_26	0.59
PF00877	NLPC_P60	0.59
PF03600	CitMHS	0.59
PF01594	AI-2E_transport	0.59
PF14588	YjgF_endoribonc	0.59
PF13181	TPR_8	0.59
PF01053	Cys_Met_Meta_PP	0.59
PF00916	Sulfate_transp	0.59
PF07687	M20_dimer	0.59
PF13424	TPR_12	0.59
PF01872	RibD_C	0.59
PF04519	Bactofilin	0.59
PF00069	Pkinase	0.59
PF12704	MacB_PCD	0.59
PF13231	PMT_2	0.59
PF13442	Cytochrome_CBB3	0.59
PF01425	Amidase	0.59
PF14316	DUF4381	0.59
PF12847	Methyltransf_18	0.59
PF14284	PcfJ	0.59
PF07603	DUF1566	0.59
PF00582	Usp	0.59
PF13564	DoxX_2	0.59
PF06224	HTH_42	0.59
PF03319	EutN_CcmL	0.59
PF01401	Peptidase_M2	0.59
PF05977	MFS_3	0.59
PF00005	ABC_tran	0.59
PF01546	Peptidase_M20	0.59
PF01636	APH	0.59
PF13490	zf-HC2	0.59
PF07992	Pyr_redox_2	0.59
PF12796	Ank_2	0.59
PF13518	HTH_28	0.59
PF06057	VirJ	0.59
PF01740	STAS	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	8.28
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.37
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.18
COG4576	Carboxysome shell and ethanolamine utilization microcompartment protein CcmK/EutM	Energy production and conversion [C]	1.18
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.18
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.18
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.59
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.59
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.59
COG3946	Type IV secretory pathway, VirJ component	Intracellular trafficking, secretion, and vesicular transport [U]	0.59
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.59
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.59
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.59
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.59
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.59
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.59
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.59
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.59
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.59
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.59
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.59
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.59
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.59
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.59
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.59
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.59
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.59
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.59
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.80 %
Unclassified	root	N/A	43.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.80 %
Unclassified	root	N/A	43.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.80 %
Unclassified	root	N/A	43.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.73 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.24 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.18 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.18 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.59 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.59 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.24 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.18 %
unclassified Holophagae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae	0.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.59 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.59 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.59 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.59 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.59 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.59 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.24 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.78 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1.18 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.59 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.59 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.24 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.78 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	1.18 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.59 %
Mangrovicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus	0.59 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.24 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	1.18 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.18 %
Mangrovicoccus ximenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus → Mangrovicoccus ximenensis	0.59 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.59 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.59 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.24 %
Syntrophus aciditrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus	1.18 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.18 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.59 %
Mangrovicoccus ximenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus → Mangrovicoccus ximenensis	0.59 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.59 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.24 %
Syntrophus aciditrophicus SB	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus → Syntrophus aciditrophicus SB	1.18 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.18 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.59 %
Mangrovicoccus ximenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus → Mangrovicoccus ximenensis	0.59 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.59 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.59 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_4807_length_1278_cov_5.784038	Not Available	1310	Open in IMG/M
2170459021\|G14TP7Y02GYFOP	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10980391	Not Available	1380	Open in IMG/M
3300000956\|JGI10216J12902_101624866	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300000956\|JGI10216J12902_103100568	Not Available	2462	Open in IMG/M
3300000956\|JGI10216J12902_114892106	Not Available	684	Open in IMG/M
3300004114\|Ga0062593_101873021	Not Available	662	Open in IMG/M
3300004114\|Ga0062593_103487758	Not Available	505	Open in IMG/M
3300004156\|Ga0062589_100146965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300004156\|Ga0062589_101369368	Not Available	688	Open in IMG/M
3300004156\|Ga0062589_102754933	Not Available	512	Open in IMG/M
3300004157\|Ga0062590_100433164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300004463\|Ga0063356_100042183	All Organisms → cellular organisms → Bacteria	4520	Open in IMG/M
3300004463\|Ga0063356_104263348	Not Available	615	Open in IMG/M
3300004480\|Ga0062592_101727350	Not Available	609	Open in IMG/M
3300004480\|Ga0062592_102001976	Not Available	572	Open in IMG/M
3300005093\|Ga0062594_100578738	Not Available	977	Open in IMG/M
3300005290\|Ga0065712_10077925	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300005328\|Ga0070676_10679443	Not Available	750	Open in IMG/M
3300005329\|Ga0070683_102257589	Not Available	522	Open in IMG/M
3300005331\|Ga0070670_100010705	All Organisms → cellular organisms → Bacteria	7838	Open in IMG/M
3300005331\|Ga0070670_100619671	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005331\|Ga0070670_102192516	Not Available	509	Open in IMG/M
3300005333\|Ga0070677_10196174	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005334\|Ga0068869_100040553	All Organisms → cellular organisms → Bacteria	3330	Open in IMG/M
3300005353\|Ga0070669_100697973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300005354\|Ga0070675_100492400	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005356\|Ga0070674_101071952	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005364\|Ga0070673_101793994	Not Available	581	Open in IMG/M
3300005365\|Ga0070688_100673314	Not Available	799	Open in IMG/M
3300005367\|Ga0070667_100070165	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300005367\|Ga0070667_100656990	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005441\|Ga0070700_100320950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300005441\|Ga0070700_101865367	Not Available	519	Open in IMG/M
3300005455\|Ga0070663_100243413	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300005457\|Ga0070662_100643428	Not Available	894	Open in IMG/M
3300005466\|Ga0070685_11342156	Not Available	547	Open in IMG/M
3300005564\|Ga0070664_100732596	Not Available	922	Open in IMG/M
3300005617\|Ga0068859_101388547	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005618\|Ga0068864_100024744	All Organisms → cellular organisms → Bacteria	5051	Open in IMG/M
3300005618\|Ga0068864_100140676	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300005719\|Ga0068861_101730925	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300005764\|Ga0066903_100052324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4992	Open in IMG/M
3300005841\|Ga0068863_100532713	Not Available	1159	Open in IMG/M
3300005844\|Ga0068862_102295346	Not Available	551	Open in IMG/M
3300006237\|Ga0097621_101293176	Not Available	689	Open in IMG/M
3300006358\|Ga0068871_100411403	Not Available	1206	Open in IMG/M
3300006844\|Ga0075428_101436894	Not Available	723	Open in IMG/M
3300006846\|Ga0075430_100931676	Not Available	716	Open in IMG/M
3300006847\|Ga0075431_100730435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus → Syntrophus aciditrophicus SB	966	Open in IMG/M
3300006876\|Ga0079217_10135639	Not Available	1168	Open in IMG/M
3300006894\|Ga0079215_10781917	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300006918\|Ga0079216_10344174	Not Available	907	Open in IMG/M
3300007004\|Ga0079218_10001680	All Organisms → cellular organisms → Bacteria	8282	Open in IMG/M
3300007004\|Ga0079218_11089583	Not Available	813	Open in IMG/M
3300007004\|Ga0079218_13579075	Not Available	527	Open in IMG/M
3300009011\|Ga0105251_10036190	All Organisms → cellular organisms → Bacteria → Acidobacteria	2431	Open in IMG/M
3300009094\|Ga0111539_12381442	Not Available	614	Open in IMG/M
3300009156\|Ga0111538_12309566	Not Available	675	Open in IMG/M
3300009156\|Ga0111538_13045708	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009156\|Ga0111538_13643226	Not Available	534	Open in IMG/M
3300009156\|Ga0111538_13904240	Not Available	516	Open in IMG/M
3300009789\|Ga0126307_10085469	All Organisms → cellular organisms → Bacteria → Proteobacteria	2491	Open in IMG/M
3300009840\|Ga0126313_11431730	Not Available	573	Open in IMG/M
3300010036\|Ga0126305_10315192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300010036\|Ga0126305_10492768	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300010037\|Ga0126304_10027641	All Organisms → cellular organisms → Bacteria	3306	Open in IMG/M
3300010037\|Ga0126304_10343487	Not Available	992	Open in IMG/M
3300010042\|Ga0126314_10880307	Not Available	661	Open in IMG/M
3300010166\|Ga0126306_11860966	Not Available	504	Open in IMG/M
3300010366\|Ga0126379_10225087	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300010403\|Ga0134123_12869221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	551	Open in IMG/M
3300011119\|Ga0105246_10549158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300011119\|Ga0105246_10865617	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300011435\|Ga0137426_1174935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012212\|Ga0150985_118483888	Not Available	670	Open in IMG/M
3300012509\|Ga0157334_1062987	Not Available	540	Open in IMG/M
3300012897\|Ga0157285_10062723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300012901\|Ga0157288_10421089	Not Available	505	Open in IMG/M
3300012903\|Ga0157289_10203330	Not Available	647	Open in IMG/M
3300012911\|Ga0157301_10163802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300012957\|Ga0164303_11116111	Not Available	570	Open in IMG/M
3300012958\|Ga0164299_10523845	Not Available	794	Open in IMG/M
3300012960\|Ga0164301_10574934	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012961\|Ga0164302_11498570	Not Available	556	Open in IMG/M
3300012961\|Ga0164302_11538378	Not Available	550	Open in IMG/M
3300012985\|Ga0164308_10622890	Not Available	921	Open in IMG/M
3300012989\|Ga0164305_10986048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300013306\|Ga0163162_10991657	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300013308\|Ga0157375_13434912	Not Available	527	Open in IMG/M
3300014326\|Ga0157380_10859249	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300014326\|Ga0157380_11866015	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300014326\|Ga0157380_12056088	Not Available	634	Open in IMG/M
3300014745\|Ga0157377_11506429	Not Available	535	Open in IMG/M
3300015371\|Ga0132258_10036101	All Organisms → cellular organisms → Bacteria	11136	Open in IMG/M
3300015371\|Ga0132258_10039427	All Organisms → cellular organisms → Bacteria	10694	Open in IMG/M
3300015371\|Ga0132258_10157611	All Organisms → cellular organisms → Bacteria	5453	Open in IMG/M
3300015371\|Ga0132258_10313571	Not Available	3863	Open in IMG/M
3300015371\|Ga0132258_10795949	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300015371\|Ga0132258_11604225	All Organisms → cellular organisms → Bacteria → Acidobacteria	1642	Open in IMG/M
3300015371\|Ga0132258_11621425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1633	Open in IMG/M
3300015371\|Ga0132258_12810729	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300015374\|Ga0132255_104581017	Not Available	586	Open in IMG/M
3300017965\|Ga0190266_10680443	Not Available	638	Open in IMG/M
3300018073\|Ga0184624_10097728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1253	Open in IMG/M
3300018083\|Ga0184628_10013526	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300018469\|Ga0190270_10258099	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300018476\|Ga0190274_12322257	Not Available	633	Open in IMG/M
3300018476\|Ga0190274_13060315	Not Available	562	Open in IMG/M
3300018476\|Ga0190274_13897895	Not Available	505	Open in IMG/M
3300018481\|Ga0190271_10049685	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300018481\|Ga0190271_11367509	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300019362\|Ga0173479_10116251	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300019362\|Ga0173479_10202697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	838	Open in IMG/M
3300019377\|Ga0190264_11340575	Not Available	608	Open in IMG/M
3300019377\|Ga0190264_12234644	Not Available	511	Open in IMG/M
3300020020\|Ga0193738_1000941	All Organisms → cellular organisms → Bacteria → Acidobacteria	12553	Open in IMG/M
3300025735\|Ga0207713_1250743	Not Available	522	Open in IMG/M
3300025900\|Ga0207710_10016739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3104	Open in IMG/M
3300025900\|Ga0207710_10080894	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300025901\|Ga0207688_10493376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300025907\|Ga0207645_10765333	Not Available	656	Open in IMG/M
3300025920\|Ga0207649_10510757	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300025925\|Ga0207650_10006229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	8129	Open in IMG/M
3300025926\|Ga0207659_10416759	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300025932\|Ga0207690_10073189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	2369	Open in IMG/M
3300025933\|Ga0207706_11543242	Not Available	540	Open in IMG/M
3300025937\|Ga0207669_11496042	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025941\|Ga0207711_11317355	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300025942\|Ga0207689_10128694	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300025945\|Ga0207679_11547645	Not Available	608	Open in IMG/M
3300025986\|Ga0207658_10970709	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300026067\|Ga0207678_10508354	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300026075\|Ga0207708_10374360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus → Mangrovicoccus ximenensis	1173	Open in IMG/M
3300026088\|Ga0207641_10774331	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300026095\|Ga0207676_10061129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2982	Open in IMG/M
3300026116\|Ga0207674_10802419	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300027886\|Ga0209486_10032313	All Organisms → cellular organisms → Bacteria	2530	Open in IMG/M
3300027909\|Ga0209382_10925901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → Syntrophus aciditrophicus → Syntrophus aciditrophicus SB	915	Open in IMG/M
3300028380\|Ga0268265_10328197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1389	Open in IMG/M
3300028380\|Ga0268265_12234914	Not Available	554	Open in IMG/M
3300028592\|Ga0247822_10005040	All Organisms → cellular organisms → Bacteria → Proteobacteria	8740	Open in IMG/M
3300028597\|Ga0247820_11398866	Not Available	510	Open in IMG/M
3300028809\|Ga0247824_10211698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1063	Open in IMG/M
3300031226\|Ga0307497_10666000	Not Available	533	Open in IMG/M
3300031228\|Ga0299914_10256511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1546	Open in IMG/M
3300031228\|Ga0299914_10362457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300031538\|Ga0310888_10924290	Not Available	545	Open in IMG/M
3300031547\|Ga0310887_10046490	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300031548\|Ga0307408_100133465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1939	Open in IMG/M
3300031548\|Ga0307408_100213926	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300031562\|Ga0310886_10382458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300031716\|Ga0310813_10166359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1787	Open in IMG/M
3300031716\|Ga0310813_10333514	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300031854\|Ga0310904_10342597	Not Available	961	Open in IMG/M
3300031854\|Ga0310904_10710489	Not Available	696	Open in IMG/M
3300031854\|Ga0310904_11024897	Not Available	589	Open in IMG/M
3300031858\|Ga0310892_10677784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	705	Open in IMG/M
3300031858\|Ga0310892_10896502	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031910\|Ga0306923_10986176	Not Available	916	Open in IMG/M
3300031995\|Ga0307409_100264770	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300032003\|Ga0310897_10709590	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032004\|Ga0307414_11496940	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300032013\|Ga0310906_10533347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	799	Open in IMG/M
3300032075\|Ga0310890_11278767	Not Available	599	Open in IMG/M
3300032144\|Ga0315910_10443375	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300033412\|Ga0310810_10028852	All Organisms → cellular organisms → Bacteria	6746	Open in IMG/M
3300033412\|Ga0310810_10585837	Not Available	1077	Open in IMG/M
3300034148\|Ga0364927_0054305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1052	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.66%
Host-Associated	Host-Associated	46.75%
Engineered	Engineered	0.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.89%
Plants	Host-Associated → Plants	46.75%
Aquatic	Environmental → Aquatic	1.78%
Solid Waste	Engineered → Solid Waste	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.57%
Sediment	Environmental → Aquatic → Sediment	1.78%
Roots	Host-Associated → Plants → Roots	1.18%
Floodplain	Environmental → Terrestrial → Floodplain	0.59%
Grass	Engineered → Solid Waste → Grass	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.51%
Loam	Environmental → Terrestrial → Soil → Loam	4.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.18%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.59%
Composting	Engineered → Solid Waste → Grass → Composting	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.47%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.18%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.59%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.18%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.18%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.59%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00601960	2140918013	Soil	MTRLTTLRTVKSVLMQGAFVAILAVMVGFHATGVAAQGQRLWSIVAHFQYQDGFEFDYVLERGVATEDVPAALAECGRSHSTGSVVRYHCYPVAE
4NP_00826160	2170459021	Switchgrass, Maize And Mischanthus Litter	QMRRVTVLKAMKRMLMPGVFVAALTALIGFQVTGLAANGQGLWSIVVHFQYQDGFEFDYVLQRGVSTEDVPAALADCGRSHRTGSVVRYHCYPVPE
ICChiseqgaiiFebDRAFT_109803912	3300000363	Soil	MTRLTTLRTVKSVLMQGAFVAILAVMVGFHATGVAAQGQRLWSIVAHFQYQDGFEFDYVLERGVATEDVPAALAECGRSHSTGSVVRYHCYPVAE*
JGI10216J12902_1016248662	3300000956	Soil	MKRLIVAAVIALIGFQTNPVAAQGPSWSIVIHFQYQDGFEFDYVLERGVSTADLGAALAECGRSHRNGAVVQYHCYAVPE*
JGI10216J12902_1031005681	3300000956	Soil	RKILMLGVFVAALTGLMGSQTTDLAAQGRGLWSIVIHFQYQDGFEFDYVLERGVATKDVGAALAECGRSHRTGSVVYYHCYPVPE*
JGI10216J12902_1148921061	3300000956	Soil	MLRLTTLKGRKIVMLGVFVATLTGLIGSQATDLAAQERGLWSIVIHFQYQDGFEFDYVLERGVATKDVGAALAECGRSHRTGSVVYYHCYPIPE*
Ga0062593_1018730212	3300004114	Soil	MPTLTMLRAMKKRVLMPGVFAAALMSMTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0062593_1034877581	3300004114	Soil	MPRVTTLKAVKKVLMAGVFAAALTAVIGSQAAGVAAAGERLWSIVIHFQYQDGFEFDYVLERGIPTKDLSAELADCGRSHSTGAVVHYHCYPVPE*
Ga0062589_1001469653	3300004156	Soil	MPTLTMLRAMKKGVLMRGVFAAALIAMTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0062589_1013693681	3300004156	Soil	MPRQTKLRAMKKVLMQGALVAALTAVIGFGAAGVAAQGQQLWSIVIHFQYNDGFEFDYVLERGVSTADMPAALAECGRSHRTGSVVQYRCYPVAE*
Ga0062589_1027549331	3300004156	Soil	MLRLTTLKARKAVMLGVFVAAVTALIGFQATGVAAQGRGLWSIVIHFQYQDGFEFDYILERGVATKDLGAALAECGRSHRNGSVVYYHCYPVPE*
Ga0062590_1004331641	3300004157	Soil	MPTLTMLRAMKKRVLMPGVFAAALIAMTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0063356_1000421838	3300004463	Arabidopsis Thaliana Rhizosphere	MPGFNVTKRILLKGLFVAATTALIGFQGTGLAAQGQRLWSIVVHFQYPDGFEFDYVIERGVSTRDLSDRLAECGRSHQYGQAIQYHCYPVAE*
Ga0063356_1042633481	3300004463	Arabidopsis Thaliana Rhizosphere	MPTLTMLRAMKKGVLMPGVFAAALMAMTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0062592_1017273501	3300004480	Soil	MPRLTTLRAMKKVLMQGAFAAALTALIGFGATSVAAQGPQLWSIVIHFQYQDGFEFDYVLQRGISTADMAPALAECGRSHWTGSVVRYHCYPVAE*
Ga0062592_1020019762	3300004480	Soil	MLRLTTLKARKAVMLGVFVAAVTALIGFQATGAAAQGRGLWSIVIHFQYQDGFEFDYILERGVATKDLGAALAECGRSHRNGSVVYYHCYPVPE*
Ga0062594_1005787381	3300005093	Soil	VLMQGLFVAAVTALIGFQGTGVAAHGQRLWSIVAHYEYEDGFEFDYVLARGVPTQDLGAALADCGRSHSVGSVVRYHCYPVAE*
Ga0065712_100779253	3300005290	Miscanthus Rhizosphere	MRRVTVLKAMKRMLMPGVFVAALTALIGFQVMGLAANGQGLWSIVVHFQYQDGFEFDYVLQRGVSTEDVPAALADCGRSHRTGSVVRYHCYPVPE*
Ga0070676_106794432	3300005328	Miscanthus Rhizosphere	MSGLTALKTTKRVLMQGVFVAALTALIGFQAAGVAAQGQNLWSIVIHFQYRDGFEFDYVLERGVSTEDLPAALADCGRSHRVGAVVQYHCYPVPE*
Ga0070683_1022575891	3300005329	Corn Rhizosphere	MPGFNATKRMLLKGLFVAATTALIGFQGTGLAAQGQRLWSIVVHFQYPDGFEFDYVIERGVSTRDLSDRLAECGRSHQYGQAIQYHCYPVAE*
Ga0070670_1000107056	3300005331	Switchgrass Rhizosphere	MTRLTTLKAMKKALTMGVFAAALTALIGFQASGVAAQGQPLWSIVVHFQYQDGFEFDYVLEQGVSTAEVGAALAACGRSHWTGSVVRYHCYPVPE*
Ga0070670_1006196712	3300005331	Switchgrass Rhizosphere	MRELTTFKAVKKLLMRGVFAAALTAAIGFQATGLAAQGQQLWSIVIHFQYQDGFEFDYVLERGVSTSDLGAALAECGRSHRVGAVVQYHCFAVPE*
Ga0070670_1021925161	3300005331	Switchgrass Rhizosphere	MTRVIVRRAMQRVLMPGVFVAVLTALVGVQVAGLAAQKQGLWSIVVHFQYPDGFEFDYVLERGVSTEGLPAALADCGRSHRNGSVVQYHCYPVPE*
Ga0070677_101961742	3300005333	Miscanthus Rhizosphere	MPRLTTLQRMKTVLMQGLFVAAVTALIGFQGTGVAAHGQRLWSIVAHYEYEDGFEFDYVLARGVPTQDLGAALADCGRSHSVGSVVRYHCYPVAE*
Ga0068869_1000405534	3300005334	Miscanthus Rhizosphere	MLRVTTSRTMKKVLFQGMCAAALTVLIGFQGTGLAAQAQQLWSIVIHFQYPDGFEFDYVLERGVSTQDLPAALADCGRSHRSGSVVQYHCYPVQE*
Ga0070669_1006979732	3300005353	Switchgrass Rhizosphere	MTRLTGLKAMRKALTIGVFVAAVTALIGFQASGVAAQGQPSWSIVVHFQYQDGFEFDYVLERGVSAADVGAALGECGRSHWTGSVVRYHCYAVPE*
Ga0070675_1004924002	3300005354	Miscanthus Rhizosphere	MPRLTTLRAMKKVLMQGVFVAALTALMGFGATGLAAQGQRLWSIVIHFQYQDGFEFDYVLQRGVSTEDMGAALAECGRSHRTGSVVRYHCYPVAE*
Ga0070674_1010719522	3300005356	Miscanthus Rhizosphere	AAALTAVIGSQAAGVAAAGERLWSIVIHFQYQDGFEFDYVLERGIPTKDLSAELADCGRSHSTGAVVHYHCYPVPE*
Ga0070673_1017939941	3300005364	Switchgrass Rhizosphere	MTRLTLKAIALTALIGFQASGLAAQGQNLWSIVIHFQYQDGFEFDYVLERGVPTPDLPAALAECGRSHRTGSVVRYHCFAVPE*
Ga0070688_1006733141	3300005365	Switchgrass Rhizosphere	LTALVGVQVAGLAAQRQGLWSILIHFQYRDGFEFDYVLERGVSTEGLPAALADCGRSHRNGSVVQYHCYPVPE*
Ga0070667_1000701651	3300005367	Switchgrass Rhizosphere	MLKLNASQVVKKLLVQGALVAALTALVGFQGPGLAAQGQGLWSIVIHFQYQDGFEFDYVLERGVTAQELGAALAECGRSHRNGAVVQYHCYAVPE*
Ga0070667_1006569902	3300005367	Switchgrass Rhizosphere	MRELTTFKAVKKLVMRGVFAAALTAAIGFQATGLAAQGQQLWSIVIHFQYQDGFEFDYVLERGVSTSDLGAALAECGRSHRVGAVVQYHCFAVPE*
Ga0070700_1003209501	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVTTLKAVKKVLMAGVFAAALTAVIGSQAAGVAAAGERLWSIVIHFQYQDGFEFDYVLERGIPTKDLSAELADCGRSHSTGAVVHYHCYPVP
Ga0070700_1018653672	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLTLKAIALTALIGFQASGLAAQGQNLWSIVIHFQYQDGFEFDYVLERGVSTQDMAAALAECGRSHRTGSVVRYHCYPVPE*
Ga0070663_1002434132	3300005455	Corn Rhizosphere	MPRVTTLKAVKKVLMAGVFAAALTAVIGSQAAGVAAAGERLWSIVIHFQYQDGFEFDYVLERGIPTKDLSAELADCGRSHSTGTVVHYHCYPVPE*
Ga0070662_1006434281	3300005457	Corn Rhizosphere	MPGFNATKRMLLKGLFVAATTALIGFQGTGLAAQGQRLWSIVVHFQYPDGFEFDYVIERGVSTRDLSDRLAECGRSH
Ga0070685_113421562	3300005466	Switchgrass Rhizosphere	MTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0070664_1007325962	3300005564	Corn Rhizosphere	MPGVFVAVLTALVGVQVAGLAAQRQGLWSIVIHFQYRDGFEFDYVLERGVSTEDLPAALADCGRSHRNGAVVQYHCYPVPE*
Ga0068859_1013885472	3300005617	Switchgrass Rhizosphere	MRRVTVLKAMKRMLMPGVFVAALTALIGFQVTGLAANGQGLWSIVVHFQYQDGFEFDYVLQRGVSTEDVPAALADCGRSH
Ga0068864_1000247442	3300005618	Switchgrass Rhizosphere	MRRVTVLKAMKRMLMPGVFVAALTALIGFQVTGLAANGQGLWSIVVHFQYQDGFEFDYVLQRGVSTEDVPAALADCGRSHRTGSVVRYHCYPVPE*
Ga0068864_1001406763	3300005618	Switchgrass Rhizosphere	MTKLTTLKAMKKALTMGVFAAALTALIGFQASGVAAQGQPLWSIVVHFQYQDGFEFDYVLEQGVSTAEVGAALAACGRSHWTGSVVRYHCYPVPE*
Ga0068861_1017309251	3300005719	Switchgrass Rhizosphere	MPRLTTSQRMKKVLMQGLFVAAVTALIGFQGTGVAAHGQRLWSIVAHYEYEDGFEFDYVLARGVPTQDLGAALADCGRSHSVGSVVRYHCYPVAE*
Ga0066903_1000523246	3300005764	Tropical Forest Soil	MSRLKMLKVTKKLLLPGVFVAALIALLGYQATGLNARGQGLWTIMIHFRYENGFEFDYTIERGVATEDLGAALAACGQSHSTGSVVRYHCYPVPE*
Ga0068863_1005327132	3300005841	Switchgrass Rhizosphere	MTRLTGLKAMRKALTIGVFVAAVTALIGFQASGVAAQPPLWSIVVHFQYEDGFEFDYVLEQGVSTADLGAALAECGRSHWNGSVVRYHCYAVPE*
Ga0068862_1022953462	3300005844	Switchgrass Rhizosphere	MTRLTTLKALALTALIGFQASGVAAQGQPSWSIVVHFQYQDGFEFDYVLERGVSASDLGAALAECGRSHRNKSVVHYHCSAVPE*
Ga0097621_1012931761	3300006237	Miscanthus Rhizosphere	MPGLTTLQRMKKVLMQGLFVTAATALIGFQGTAMAAHEPRLWSVVIHFEYQDGFEFDYVLERGVPSSELGAALADCGRSHSVGSVVRYHCYPVAE*
Ga0068871_1004114032	3300006358	Miscanthus Rhizosphere	MQKLTKAMKKVLMPGVFVAAVAVLIGFQATGVAAHAERLWSIVAHFQYEDGFEFDYVIERGVPTASVGVALADCGRSHSIGSVVRYHCYPVPE*
Ga0075428_1014368942	3300006844	Populus Rhizosphere	MTRLTALKALALAALIGFQASHVAAQGRPSWSIVIHFQYQDGFEFDYVLERGVSTSELGAALAECGRSHRNGSVVQYHCYALPE*
Ga0075430_1009316762	3300006846	Populus Rhizosphere	MPGLTALKAVKAVLMHGIFVAAVIALIGFQGTGVAAQGKRLWSIVIHFQYQDGFEFDYVLERGVSTADLGDALAECGRSHWVGSVVHYHCYPVPE*
Ga0075431_1007304351	3300006847	Populus Rhizosphere	MPRVMTLKAVRKVLVAGGFVASLLGLVEFQAAGVAAQGQRLWSIVIHFQYQDGFEFDYVLERGVPTQGVAAALADCGRSHRSGSVVRYHCYPVPE*
Ga0079217_101356392	3300006876	Agricultural Soil	MTRLTTFKSMKKALTMGVFVAALTALIGFQARGVAAQGQPSWSIVVHFLYQDGFEFDYVLQRGVSTADVGAALAECGRSHRTGSVVRYHCFAV
Ga0079215_107819171	3300006894	Agricultural Soil	LTALIGFQASGVAAQGQPSWSIVAHFLYQDGFEFDYVLQRGVSTADVGAALAECGRSHRTRQVVHYHCFAVPE*
Ga0079216_103441741	3300006918	Agricultural Soil	MTRLTTVKAMKKALTMGVFVAALTALIGFQARGVAAQGLPSWSIVVHFLYQDGFEFDYVLQRGVSTADVGAALAECGRSHRTGSVVRYHCFAV
Ga0079218_100016809	3300007004	Agricultural Soil	MTRLTTLKSMKKALTMGMFVAALTALIGFRASGVAAQEQPSWSIVAHFLYQDGFEFDYVLQRGVSTADVGAALAECGRSHRTRQVVHYHCFAVPE*
Ga0079218_110895832	3300007004	Agricultural Soil	MTRLTTVKAMKKALTMGVFVAALTALIGFQASGVAAQGQPSWSIVVHFLYQDGFEFDYVLQRGVSTADVGAALAECGRSHRTGSVVRYHCFAVPE*
Ga0079218_135790752	3300007004	Agricultural Soil	MPRLTTLRAMRKLLMQGVFVAALTALIGFAATGVSAQGQRLWSIVIHFQYQDGFEFDYVLERGVSTEDMAAALADCGRSHRTGSVVRYYCYPVPE*
Ga0105251_100361903	3300009011	Switchgrass Rhizosphere	MRRVTVLKAMKRMLIPGVFVAALTALIGFQVTGLAANGQGLWSIVVHFQYQDGFEFDYVLQRGVSTEDVPAALADCGRSHRTGSVVRYHCYPVPE*
Ga0111539_123814422	3300009094	Populus Rhizosphere	MKKVLFQGMCAAALTVLIGFQGTGLAAQAQQLWSIVIHFQYQDGFEFDYVLERGVSTQDMAAALAECGRSHRTGSVVRYHCYPVPE*
Ga0111538_123095661	3300009156	Populus Rhizosphere	DMPRLTTLRAMKKVLMQGVFVAALTALIGFGATGLAAQGQRLWSIVIHFQYQDGFEFDYVLERGVSTQDMAAALAECGRSHRTGSVVRYHCHPVPE*
Ga0111538_130457082	3300009156	Populus Rhizosphere	MTRLTALKAIALTALIGFQASQVAAQGQPSWSVVIHFQYQDGFEFDYVLQRGVSASELGAALAECGRSHRNGSVVQYHCYALPE*
Ga0111538_136432261	3300009156	Populus Rhizosphere	MLRLTTLKARKAVMLGVFVAAVTALIGFQATGAAAQGRGLWSIVIHFQYQDGFEFDYVLERGVATKDLGAALAECGRSHRNGSVVYYHCYPVPE*
Ga0111538_139042401	3300009156	Populus Rhizosphere	MPGLTMVKAVKAVLVQGIFVAALVALIGFQGTGVAAQGQRLWSIVIHFQYQDGFEFDYVLERGVSTADLGAALAECGRSHWVGSVVHYHCYPVPE*
Ga0126307_100854694	3300009789	Serpentine Soil	MPRLTMWRSVKKVVTQGLFVAALTAMMGFGATRLAASGPRLWSIVVHFQYQDGFELDYVLEQGVPTTTMAAALAECGASHWTGSVVRYYCYPVPE*
Ga0126313_114317302	3300009840	Serpentine Soil	MKNVLMQGAFVAAVMAAIGLQATGVAAQGQRLWSIVAHFEYQDGFELDYVIEQGVPAADLGAALAACGRSHRTGTVVRYHCYALPE*
Ga0126305_103151922	3300010036	Serpentine Soil	MTRQTTGQRVKKVLMAGLFVAAMTVLVGFQGAGVAAAGPRVWSIVVHLEYQDGFELDYVVQRGVPTVDIGAVLADCGSSHVVGTVVRYHCYPVAESE*
Ga0126305_104927682	3300010036	Serpentine Soil	MLRLTTLTTKKTLLVGVFIAALTTLIGFQSTGVAAQRAQLWSIVGHYQYEDGFELDYTIERGVPTGELGEALAACGRSHRFGASVVNYHCYPVPE*
Ga0126304_100276413	3300010037	Serpentine Soil	MTRQTTGQRVKKVLMAGLFVAAMTVLVGFQGAGVAAAGPRLWSIVVHLEYQDGFELDYVVQRGVPTVDIGAVLADCGSSHVVGTVVRYHCYPVAESE*
Ga0126304_103434873	3300010037	Serpentine Soil	MLRLTTLKTKKTLLVGVFIAALTTLIGFQSTGVAAQRAQLWSIVGHYQYEDGFEFDYTIEGGVPTSELGAALA
Ga0126314_108803071	3300010042	Serpentine Soil	MLKSVTLKVMKNALVQGVFVAAVTAAIGLQATGVAAQGQRLWSIVAHFEYQDGFELDYVVDRGVATTDMAAALADCGRSHWTGTVVRYHCYPVPE*
Ga0126306_118609662	3300010166	Serpentine Soil	LVQGALIAALVAAIGFQATEVAAQGKRLWSVVVHLEYQDGFELDYVLEQGVPTTTMAAALAECGASHWTGSVVRYYCYPVPE*
Ga0126379_102250872	3300010366	Tropical Forest Soil	MSKLKMLKITKKLLLPGVFVAALIAMAGYQATGLSAQGRGLWTIMIHFRYENGFEFDYTIERGVATQDLGAALAACGQSHNTGSVVRYHCYPVPE*
Ga0134123_128692211	3300010403	Terrestrial Soil	AALTALIGFGATGVAAQSQQLWSIVIHFQYQDGFEFDYVLQRGVTTADLGAALAECGRSHRSGSVVQYHCRAVPE*
Ga0105246_105491582	3300011119	Miscanthus Rhizosphere	MPTLTMLRAMKKRVLMPGGFAAALIAMIGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0105246_108656171	3300011119	Miscanthus Rhizosphere	MVARFRSFMVRRTTMTRLTTLKAMKKALTMGVFAAALTALIGFQASGVAAQGQPLWSIVVHFQYQDGFEFDYVLEQGVSTAEVGAALAACGRSHWTGSVVRYHCYPVPE*
Ga0137426_11749352	3300011435	Soil	MTTLTTLKSMKKALTMGVFIAALTALIGFQASGVAAQGQPSWSIVVHFLYQNGFEFDYVLERGVSTADVGAALAECGRSHRTGSVVRYHCYAVPE*
Ga0150985_1184838881	3300012212	Avena Fatua Rhizosphere	TLRTVKKVVTQGLFAAALAATIGFGATPAAAAGPRLWSIVVHFEYQDGFEFDYVLERGVSAADVGAALADCGRSHQTGSVVRYHCYPVPE*
Ga0157334_10629872	3300012509	Soil	MFGLTTLRRMKKMVMPGLFAAAVAALMGFQATEVSAHGSRLWSIVIHFEYEDGFEFDYVLEQGVSTADLGAALADCGSSHSVGSVVRYHCYPVAE*
Ga0157285_100627232	3300012897	Soil	MPTLTMLRAMKKRVLMPGVFAAALMSMTGLQAAGAAAQGRPTFSIVVHFQYPDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0157288_104210891	3300012901	Soil	MPTLTMLRAMKKRVLMPGVFAAALIAMIGLQAAGAPAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0157289_102033302	3300012903	Soil	MKKVLLQGLFVAAVTAGIGFQSAGVAAHGPRTWSIVVHFAYQNGFEFDYVLKRGVTAEELGAALGECGGSHWVGSVVRYHCYPVAE*
Ga0157301_101638022	3300012911	Soil	MLRAMKKRVLMPGVFAAALMSMTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0164303_111161112	3300012957	Soil	FAAALITLIGFGATGVAAQGQRLWSIVIHFQYEDGFEFDYVLQRGVPTEDKAAALAECGRSHRDGSVVHYHCYPVPE*
Ga0164299_105238452	3300012958	Soil	MSRLMMLKARKKLLMQGVLAAALITLIGFGATGVAAQGQRLWSIVIHFQYEDGFEFDYVLQRGVPTEDKAAALAECGRSHRDGSVVRYHCYPVPE*
Ga0164301_105749341	3300012960	Soil	MMLKARQKLLMQGVFAAALITLIGFGATGVAAQGQRLWSIVIHFQYEDGFEFDYVLQRGVPTEDKAAALAECGRSHRDGSVVHYHCYPVPE*
Ga0164302_114985702	3300012961	Soil	MPGGFAAALIAMIGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0164302_115383781	3300012961	Soil	PFSIDVVRRTAMPTLTTLKRVKRVLMPGVFVAALIAMTALQATGAAAQGRPTWSIVIHFQYQDGFEFDYVLERGVATSEIGAALAECGSSHWIGGNVVHYHCYPVQE*
Ga0164308_106228902	3300012985	Soil	MQKLTKAMKKVLMPGVFVAAVAALIGFQATGVAAHAERLWSIVAHFQYEDGFEFDYVIERGVPTASVGAALADCGRSHSIGSVVRYHCYPVPE*
Ga0164305_109860481	3300012989	Soil	QMPGLTSLIAMKKVLTRGVFVAAVTALIGFHVMGLAARGQELWSIVVHFQYSDGFEFDYVLERGVSTEDLGAALADCGRSHRTGSVVRYHCYPVPE*
Ga0163162_109916571	3300013306	Switchgrass Rhizosphere	MKSVLMPGVFVAALAALIGFQTTGVAAQAQRLWSIVAHFQYEDGFEFDYVIQRGVPTSGLGAALGDCGSSHWIGSVVRYHCYPVPE*
Ga0157375_134349121	3300013308	Miscanthus Rhizosphere	MPRLTTLKAMKKVLMPAVFVAAVAALIGFQGTGVAAHAERLWSIVIHFQYEDGFEFDSVIERGVPTSDLGAALADCGASHSIGSVVRYHCYPVPE*
Ga0157380_108592492	3300014326	Switchgrass Rhizosphere	MLLPGVFAAAVAALIGFHGTGVSAQGPSRLWSIVVHFEYQDGSELDYVLEQGVPTAELGAALAECGRSHSVGSVVRYHCYPVAE*
Ga0157380_118660152	3300014326	Switchgrass Rhizosphere	MTRLTALKAIALTALIGFQASQVAAQGQPSWSIVIHFQYQDGFEFDYVLQRGVSASELGAALAECGRSHRNGSVVQYHCYALPE*
Ga0157380_120560882	3300014326	Switchgrass Rhizosphere	MLRLTTLKTKKTLLVGVFIAALTTLIGFQSTLVAAQRAQLWSIVGHYQYEDGFEFDYTIESGVPTKELGAALAECGRSHRFGASVVNYHCYPVPE*
Ga0157377_115064292	3300014745	Miscanthus Rhizosphere	VLAEMVARFRSVMVRRTTMTKLTTLKAMKKALTMGVFAAALTALIGFQASGVAAQGQPLWSIVIHFQYQDGFEFDYVLEQGVSTAEVGAALAACGRS
Ga0132258_100361014	3300015371	Arabidopsis Rhizosphere	MKKVLMQGLFVGAVTALIGFQGTGVAANGPRLWSIVVHFEYEDGFEFDYVLEQGVSTADLGAALADCGSSHSVGSVVRYHCYPVAE*
Ga0132258_1003942711	3300015371	Arabidopsis Rhizosphere	MLKARKKLLMQGVLAAALITLIGFGATGVAAQGERLWSIVIHFQYEDGFEFDYVLQRGVPTEDKAAALAECGRSHRDGSVVHYHCYPVPE*
Ga0132258_101576114	3300015371	Arabidopsis Rhizosphere	MLKLTSLKAKKNVLLQGAFVAALAAGIASQASGVAAQGQRLWTIVIHFEYQDGFELDYPLQSGITTAELPAALAECGRSHSTGSVVRYHCYPVQE*
Ga0132258_103135712	3300015371	Arabidopsis Rhizosphere	MPTLTMLRAMKKRVLMPGGFAAALIVMIGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE*
Ga0132258_107959492	3300015371	Arabidopsis Rhizosphere	MYMARRTTMPRVTTLKAVKKVLMAGVFAAALTAVIGSQAAGVAAAGERLWSIVIHFQYQDGFEFDYVLERGIPTKDLSAELADCGRSHSTGTVVHYHCYPVPE*
Ga0132258_116042253	3300015371	Arabidopsis Rhizosphere	MLRLTTLKARKVLMLGVFVTALTALIGFGGTEVAAQGRGLWSIVIHFQYHDGFEFDYVLQRGVSAKDLGAALAECGRSHWTGSVVQYHCYPVAE*
Ga0132258_116214253	3300015371	Arabidopsis Rhizosphere	MPRLTTLKAMKKVLIQGGVFVAALAALIGFHAAGVAAQGERLWSIVIHFQYEDGFEFDSVLERGVPTKDLGEALADCGRSHSIGSVVRYHCYPVPE*
Ga0132258_128107292	3300015371	Arabidopsis Rhizosphere	MRRLTTVMARKVLVTGVFVAAVMALIGFQATGAAAQGRGLWSIVIHFQYEDGSELDYVLQQGVASKDLGAALAECGRSHSTGSVVRYHCYPVAE*
Ga0132255_1045810171	3300015374	Arabidopsis Rhizosphere	MPTLTTLKRVKKVLMPGVFVAALVAMTGFEAAGAAAQGRPTWSIVIHFQYQDGFEFDYVLERGVATSEIGAALAECGSSHWIGGNVVHYHCYPVQE*
Ga0190266_106804431	3300017965	Soil	MTRLTTLKAMKKVLTMGVFVAAVTALIGFQASGAAAQGPLWSIVIHFQYQDGFEFDYVLERGVSTADVGAALAECGRSHRTRQVVHYHCYAVPE
Ga0184624_100977282	3300018073	Groundwater Sediment	MLKLTSLKAKKNVLLLGAFVAALAAGIASQASGVAAQGQRLWTIVVHFEYQDGFELDYPLQSGITTAELPAALGECGRSHYTGSVVRYHCYPVQE
Ga0184628_100135262	3300018083	Groundwater Sediment	MLKSTTLKAMKNVLAQGAFIAALVGAIGFQATGVVAQGQRLWSIVVHFEYADGFELDHVLENGIATSDVPDALAACGRSHWTGSVVRYHCYPVPE
Ga0190270_102580992	3300018469	Soil	MTRLTTLKNMKKALTMGVFVAALTALIGFQASGVAAQGQPSWSIVVHFLYQNGFEFDYVLERGVSTADLGAALAECGRSHRTGSVVRYHCYAVPE
Ga0190274_123222572	3300018476	Soil	MTRLTTLKAMKKDLAMGVFVAALTALIGFQASGAAAQELPSWSIVVHFLYQDGFEFDYVLERGVSTADVGAALAECGRSHRTGSVVRYHCSAVPE
Ga0190274_130603152	3300018476	Soil	MLRLTTVNTRKALMLGVLVAALTALIGFQAPGLAAQGRGLWSIVIHFQYQDGFEFDYVLERGVATKDVGAALAECGR
Ga0190274_138978951	3300018476	Soil	KQMTRVIVRRAMQRVLMPGVFVAVLTALVGVQVAGLAAQKQGLWSIVVHFQYPDGFEFDYVLERGVSTEGLPAALADCGRSHRNGSVVQYHCYPVPE
Ga0190271_100496854	3300018481	Soil	MSRLTTVQRMKKVLLQGLFVAAVTAGIGFHGAGVAASGPRLWSIVVHFEYQNGFEFDYVLERGVPTEELGAALGECGGSHWVGSVVRYHCFPVAE
Ga0190271_113675092	3300018481	Soil	MTTLTTLKSMKKALTMGVFIAALTALIGFQASGVAAQGQPSWSIVVHFLYQNGFEFDYVLERGVSTADVGAALAECGRSHRTRQVVHYHCYAVPE
Ga0173479_101162512	3300019362	Soil	MPRLTTLQRMKTVLMQGLFVAAVTALIGFQGTGVAAHGQRLWSIVAHYEYEDGFEFDYVLARGVPTQDLGAALADCGRSHSVGSVVRYHCYPVAE
Ga0173479_102026972	3300019362	Soil	MPRLTTVQRIKKVLLQGLFVAAVTAGIGFQSAGVAAHGPRTWSIVVHFAYQNGFEFDYVLKRGVTAEELGAALGECGGSHWVGSVVRYHCYPVAE
Ga0190264_113405751	3300019377	Soil	MMRLTTLKAMEKVLTMGVFIVALAALIGFQASGAAAHGPLWSIVIHFQYQDGFEFDYVLERGVSTADVGAALAECGRSHRTGS
Ga0190264_122346442	3300019377	Soil	MKRLIVAAVIVLLGFQATGAAAQGRSWSIVIHFQYQDGFEFDYVLERGVAPGDLGAALAECGRSHRNGAVVQYHCYAVPE
Ga0193738_10009413	3300020020	Soil	MLRLTTLPRVKKVLMQGLFVAAVTALIGFKATGVAAQGPRLWSIVVHFEYQNGFEFDYVLERGVPAAELGAALAECGSSHSVGSVVRYHCYPVAE
Ga0207713_12507431	3300025735	Switchgrass Rhizosphere	MRRVTVLKAMKRMLIPGVFVAALTALIGFQVTGLAANGQGLWSIVVHFQYQDGFEFDYVLQRGVSTEDVPAALADCGRSHRTGSVVRYHCYPVPE
Ga0207710_100167394	3300025900	Switchgrass Rhizosphere	MRRVTVLKAMKRMLMPGVFVAALTALIGFQVTGLAANGQGLWSIVVHFQYQDGFEFDYVLQRGVSTEDVPAALADCGRSHRTGSVVRYHCYPVPE
Ga0207710_100808942	3300025900	Switchgrass Rhizosphere	MLKLNASQVVKKLLVQGALVAALTALVGFQGPGLAAQGQGLWSIVIHFQYQDGFEFDYVLERGVTAQELGAALAECGRSHRNGAVVQYHCYAVPE
Ga0207688_104933761	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPGFNATKRMLLKGLFVAATTALIGFQGTGLAAQGQRLWSIVVHFQYPDGFEFDYVIERGVSTRDLSDRLAECGRSHQYGQAIQYHCYPVAE
Ga0207645_107653332	3300025907	Miscanthus Rhizosphere	MSGLTALKTTKRVLMQGVFVAALTALIGFQAAGVAAQGQNLWSIVIHFQYRDGFEFDYVLERGVSTEDLPAALADCGRSHRVGAVVQYH
Ga0207649_105107572	3300025920	Corn Rhizosphere	MTKLTTLKAMKKALTMGVFAAALTALIGFQASGVAAQGQPLWSIVVHFQYQDGFEFDYVLEQGVSTAEVGAALAACGRSHWTGSVVRYHCYPVPE
Ga0207650_100062293	3300025925	Switchgrass Rhizosphere	MTRLTTLKAMKKALTMGVFAAALTALIGFQASGVAAQGQPLWSIVVHFQYQDGFEFDYVLEQGVSTAEVGAALAACGRSHWTGSVVRYHCYPVPE
Ga0207659_104167592	3300025926	Miscanthus Rhizosphere	MPRLTTLRAMKKVLMQGVFVAALTALMGFGATGLAAQGQRLWSIVIHFQYQDGFEFDYVLQRGVSTEDMGAALAECGRSHRTGSVVRYHCYPVAE
Ga0207690_100731893	3300025932	Corn Rhizosphere	MPGFNVTKRILLKGLFVAATTALIGFQGTGLAAQGQRLWSIVVHFQYPDGFEFDYVIERGVSTRDLSDRLAECGRSHPYGQAIQYHCYPVAE
Ga0207706_115432422	3300025933	Corn Rhizosphere	MPGFNATKRMLLKGLFVAATTALIGFQGTGLAAQGQRLWSIVVHFQYPDGFEFDYVIERGVSTRDLSDRLAECGRSHQY
Ga0207669_114960422	3300025937	Miscanthus Rhizosphere	TTLRAMKKVLMQGVFVAALTALIGFGATGLAAHGQRLWSIVIHFQYQDGFEFDYVLQRGVSTEDTGAALAECGRSHRTGSVVRYHCYPVAE
Ga0207711_113173552	3300025941	Switchgrass Rhizosphere	RTMTRLTGLKAMRKALTIGVFVAAVTALIGFQASGVAAQPPLWSIVVHFQYEDGFEFDYVLEQGVSTADLGAALAECGRSHWNGSVVRYHCYAVPE
Ga0207689_101286943	3300025942	Miscanthus Rhizosphere	MLRVTTSRTMKKVLFQGMCAAALTVLIGFQGTGLAAQAQQLWSIVIHFQYPDGFEFDYVLERGVSTQDLPAALADCGRSHRSGSVVQYHCYPVQE
Ga0207679_115476451	3300025945	Corn Rhizosphere	MRRVTVLKAMKRMLMPGVFVIALTGLIGFHVTGLTAQGQGLWSIVVHFQYSDGFEFDYVLERGVSTKDVPAALADCGRSHRTGSVVQYHCYPVPE
Ga0207658_109707092	3300025986	Switchgrass Rhizosphere	LTAAIGFQATGLAAQGQQLWSIVIHFQYQDGFEFDYVLERGVSTSDLGAALAECGRSHRVGAVVQYHCFAVPE
Ga0207678_105083542	3300026067	Corn Rhizosphere	MPRVTTLKAVKKVLMAGVFAAALTAVIGSQAAGVAAAGERLWSIVIHFQYQDGFEFDYVLERGIPTKDLSAELADCGRSHSTGTVVHYHCYPVPE
Ga0207708_103743602	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLTLKAIALTALIGFQASGLAAQGQNLWSIVIHFQYQDGFEFDYVLERGVSTQDMAAALAECGRSHRTGSVVRYHCYPVPE
Ga0207641_107743312	3300026088	Switchgrass Rhizosphere	MTRLTGLKAMRKALTIGVFVAAVTALIGFQASGVAAQPPLWSIVVHFQYEDGFEFDYVLEQGVSTADLGAALAECGRSHWNGSVVRYHCYAVPE
Ga0207676_100611291	3300026095	Switchgrass Rhizosphere	MTRLTTLKAMKKALMMGVFAAALTALIGFQASGVAAQGQPLWSIVVHFQYQDGFEFDYVLEQGVSTAEVGAALAACGRSHWTGSVVRYHCYPVPE
Ga0207674_108024192	3300026116	Corn Rhizosphere	MTRLTTLKAVKKALAMGVFAAALTALIGFQASEVAAQGQPLFSIVIHFTYQNGFEFDYVIERGVSAADVGAALAECGRSHRNPSVVYYHCFAVPE
Ga0209486_100323132	3300027886	Agricultural Soil	MTRLTTLKSMKKALTMGMFVAALTALIGFRASGVAAQEQPSWSIVAHFLYQDGFEFDYVLQRGVSTADVGAALAECGRSHRTRQVVHYHCFAVPE
Ga0209382_109259012	3300027909	Populus Rhizosphere	MPRVMTLKAVRKVLVAGGFVASLLGLVEFQAAGVAAQGQRLWSIVIHFQYQDGFEFDYVLERGVPTQGVAAALADCGRSHRSGSVVRYHCYPVPE
Ga0268265_103281973	3300028380	Switchgrass Rhizosphere	MLRVTTSRTMKKVLFQGMCAAALTVLIGFQGTGLAAQAQQLWSIVIHFQYPDGFEFDYVLERGVSTQDLPAALADCGRS
Ga0268265_122349141	3300028380	Switchgrass Rhizosphere	MSGLTALKTTKRVLMQGVFVAALTALIGFQAAGVAAQGQNLWSIVIHFQYRDGFEFDYVLERGIPTKDLSAELADCGRSHSTGTVVHYHCYPVPE
Ga0247822_100050409	3300028592	Soil	MPRLTTLRAMKKVLMQGAFAAALTALIGFGATSVAAQGPQLWSIVIHFQYQDGFEFDYVLQRGISTADMAPALAECGRSHWTGSVVRYHCYPVAE
Ga0247820_113988661	3300028597	Soil	MPRLTTLRAMKKVLMQGAFAAALTALIGFGATSVAAQGPQLWSIVIHFQYQDGFEFDYVLQRGISTADMAPALAECGRSHWTGSVVRYH
Ga0247824_102116981	3300028809	Soil	MQGAFAAALTALIGFGATSVAAQGPQLWSIVIHFQYQDGFEFDYVLQRGISTADMAPALAECGRSHWTGSVVRYHCYPVAE
Ga0307497_106660001	3300031226	Soil	MPGLFVAALTALIGLQATGVAAQGERLWSIVVHFQYEDGFEFDYVIERGVPTAGLGAALADCGSSHSIGSVVRYHCYPVPE
Ga0299914_102565111	3300031228	Soil	MPTPTTLRRMKRVLMQGVFVAALTALIGFQVTGVAAQGQGLWSIVIHFRYQNGFEFDYVLEREISTANLAAALAECGRSHRIGSVVQYHCYPVPE
Ga0299914_103624572	3300031228	Soil	MPMLTMLRPMKKVLMQGVLVAALTALIGFQVPGVAAQGQGLWSIVIHFQYQNGFEFDYVLERGVSTENLAAALAECGRSHRTGSVVRYHCYPVAE
Ga0310888_109242902	3300031538	Soil	KVLMQGAFAAALAALIGFGATSVAAQGQQLWSIVIHFQYQDGFEFDYVLERGVSTADMPPALAECGRSHWTGSVVRYHCYPVAE
Ga0310887_100464902	3300031547	Soil	MPGLTTLQRMKKVLMQGLFVAAVTALIGFQGTGVAAYGPRLWSIVVHFEYQDGSELDYVLEQGVPTAELGAALAECGRSHSVGSVVRYHCYPVAE
Ga0307408_1001334651	3300031548	Rhizosphere	MLRLTRSRAMKTLTRGVFVAALIALIGFAATELAAQGQRLWSIVIHFQYQDGFEFDYVLQRGVSTSELGAALAECGRSHRTGSVVRYYCYPVAE
Ga0307408_1002139262	3300031548	Rhizosphere	MPGLTTLRAMKKILMQGVFVAALMALIGFGATTVSALGQQLWSIVIHFQYQDGFEFDYVLQRGVSTAEIGAALAECGRSHQTGSVVRYYCFPLPE
Ga0310886_103824582	3300031562	Soil	MPTLTMLRAMKKRVLMPGGFAAALIAMIGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE
Ga0310813_101663592	3300031716	Soil	MPTLTMLRAMKKRVLMPGVFAAALIAMTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE
Ga0310813_103335142	3300031716	Soil	MLKLTTSKGMTTMLMRGVFVAALTAAIGFQATGLAAQGQRLWSIVAHFQYDSGFEFDYVVERGVSTEDLADHLAYCGSSHYIGGSVVRYHCYPVPE
Ga0310904_103425972	3300031854	Soil	MPTLTMLRAMKKRVLMPGVFAAALIAMIGLQAAGAPAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE
Ga0310904_107104891	3300031854	Soil	MPRVTTLKAVKKVLMAGVFAAALTAVIGSQAAGVAAAGERLWSIVIHFQYQDGFEFDYVLERGIPTKDLSAELADCGRSHSTGAVVHYHCYPVPE
Ga0310904_110248972	3300031854	Soil	MPRLTTLSAMKKVLMRGVFVAALTALIGFGATGLAAQGQRLWSIVIHFQYQDGFEFDYVLERGVSTEDMGAALADCGRSHRTGSVVRYHCYPVPE
Ga0310892_106777841	3300031858	Soil	QGLFVAAVTALIGFQGTGVAAYGPRLWSIVVHFEYQDGSELDYVLEQGVPTAELGAALAECGRSHSVGSVVRYHCYPVAE
Ga0310892_108965022	3300031858	Soil	MPGLTTLQRMKKVLMQGLFVAAVTALIGFQGTGVAAHGQRLWSIVAHYEYEDGFEFDYVLARGVPTQDLGAALADCGRSHSVGSVVRYHCYPVAE
Ga0306923_109861762	3300031910	Soil	MSKLKMLHVTKKVLLPGVFVAALIALLGYQATGLNAQGQRLWTIMVHFTYQDGFEFDYVLQRDVPTSDLGAALGACGRSHSSGSVVRYHCYPVPE
Ga0307409_1002647702	3300031995	Rhizosphere	MLRLTTVNTRKALMLGVLVAALTALIGFQAPGLAAQGRGLWSIVIHFQYQDGFEFDYVLERGVATKDVGAALAECGRSHWTGSVVHYHCYPIPE
Ga0310897_107095902	3300032003	Soil	MPSLTTLRATKKVLMQGVFVAALTALIGFQATPVAAQRQPLWSIVIHFLYQDGFEFDYVLERGVSTSELGAALAECGRSHWTGSVVHYHC
Ga0307414_114969401	3300032004	Rhizosphere	MTKLKTLKALALTALIGFQASGVAAQEQLHSIVIHFQYPDGFEFDYVLERGVSTAELGAALAECGRSHRTGSYIHYHCSAVPE
Ga0310906_105333472	3300032013	Soil	MTRLTALKAIALTALIGFQASQVAAQGQPSWSIVIHFQYQDGFEFDYVLQRGVSASELGAALAECGRSHRNGSVVQYHCYALPE
Ga0310890_112787671	3300032075	Soil	MARLTTLRAMKKVLMQGVFVAALAALIGFGATGVAAQGQRLWSIVIHFQYQDGFEFDYVLERGVSTEDMGAALAECGRSHRTGSVVRYHCYPVAE
Ga0315910_104433752	3300032144	Soil	MTRLTALKAIALTALIGFQASQVAAQGQPSWSVVIHFQYQDGFEFDYVLERGVSASELGAALAECGRSHRNGSVVHYHCYALPE
Ga0310810_100288521	3300033412	Soil	MKKRVLMRGVFAAALIAMTGLQAAGAAAQGRPTFSIVVHFQYQDGFEFDYVLERGVPASEIGAALGECGASHWTGGNVVHYHCYPVAE
Ga0310810_105858371	3300033412	Soil	MPGFNVTKRILLKGLFVAATTALIGFQGTGLAAQGQRLWSIVVHFQYPDGFEFDYVIERGVSTRDLSDRLAECGRSHQYGQAIQYHCYPVAE
Ga0364927_0054305_125_385	3300034148	Sediment	MKKVLMQGVLVAALAALIGFHVTGLAAQGQELWSIVVHFQYPDGFEFDYVLERGVSTEDLPAALADCGRSHRTRSVVRYHCYPVAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F036747

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences