Metagenome / Metatranscriptome Family F036618

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036618
Family Type	Metagenome / Metatranscriptome
Number of Sequences	169
Average Sequence Length	39 residues
Representative Sequence	GPGDKVPNVNGTPIHGPVRLNDGDLIEVSGVRLNFIFRE
Number of Associated Samples	137
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.82 %
% of genes from short scaffolds (< 2000 bps)	82.84 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.083 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.527 % of family members)
Environment Ontology (ENVO)	Unclassified (27.811 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.621 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.91% Coil/Unstructured: 82.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF05226	CHASE2	59.76
PF00873	ACR_tran	19.53
PF03150	CCP_MauG	1.18
PF12700	HlyD_2	0.59
PF00498	FHA	0.59
PF13533	Biotin_lipoyl_2	0.59
PF05036	SPOR	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	59.76
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	1.18

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.08 %
Unclassified	root	N/A	5.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.08 %
Unclassified	root	N/A	5.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.08 %
Unclassified	root	N/A	5.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.06 %
Unclassified	root	N/A	5.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.02 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.92 %
Unclassified	root	N/A	5.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.33 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.59 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	13.02 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.92 %
Unclassified	root	N/A	5.92 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.37 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	13.02 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	5.92 %
Unclassified	root	N/A	5.92 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.37 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.59 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	13.02 %
Unclassified	root	N/A	5.92 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	2.96 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.37 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	13.02 %
Unclassified	root	N/A	5.92 %
Paraburkholderia bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	2.96 %
Acidobacteria bacterium 13_1_40CM_4_61_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.37 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101304099	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300000955\|JGI1027J12803_106353367	All Organisms → cellular organisms → Bacteria	3546	Open in IMG/M
3300001089\|JGI12683J13190_1001834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2994	Open in IMG/M
3300001565\|A35518A_1025586	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300002910\|JGI25615J43890_1000623	All Organisms → cellular organisms → Bacteria	4336	Open in IMG/M
3300005178\|Ga0066688_10617794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	696	Open in IMG/M
3300005184\|Ga0066671_10321770	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005332\|Ga0066388_106043680	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005450\|Ga0066682_10801829	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300005561\|Ga0066699_10187127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1435	Open in IMG/M
3300005569\|Ga0066705_10339093	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300005764\|Ga0066903_102981347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	917	Open in IMG/M
3300005764\|Ga0066903_104487875	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005921\|Ga0070766_10567792	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300006102\|Ga0075015_100059404	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300006102\|Ga0075015_100421797	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300006796\|Ga0066665_10175352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	1646	Open in IMG/M
3300006797\|Ga0066659_10430493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300006806\|Ga0079220_10032722	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300006854\|Ga0075425_100656249	All Organisms → cellular organisms → Bacteria → Proteobacteria	1206	Open in IMG/M
3300007255\|Ga0099791_10110348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1271	Open in IMG/M
3300007265\|Ga0099794_10019117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	3081	Open in IMG/M
3300007265\|Ga0099794_10390378	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300009038\|Ga0099829_11119135	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300009038\|Ga0099829_11688003	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300009088\|Ga0099830_10442168	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300009088\|Ga0099830_11530581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	555	Open in IMG/M
3300009088\|Ga0099830_11563879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	549	Open in IMG/M
3300009089\|Ga0099828_10188833	All Organisms → cellular organisms → Bacteria → Acidobacteria	1835	Open in IMG/M
3300009092\|Ga0105250_10307328	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300009137\|Ga0066709_101993645	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300009615\|Ga0116103_1085822	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300010046\|Ga0126384_11135551	Not Available	718	Open in IMG/M
3300010048\|Ga0126373_10049227	All Organisms → cellular organisms → Bacteria → Proteobacteria	3739	Open in IMG/M
3300010321\|Ga0134067_10018090	All Organisms → cellular organisms → Bacteria → Acidobacteria	2092	Open in IMG/M
3300010325\|Ga0134064_10218860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	691	Open in IMG/M
3300010335\|Ga0134063_10186556	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300010339\|Ga0074046_10307447	All Organisms → cellular organisms → Bacteria → Acidobacteria	973	Open in IMG/M
3300010360\|Ga0126372_13149883	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300010366\|Ga0126379_12235379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	648	Open in IMG/M
3300010376\|Ga0126381_100106369	All Organisms → cellular organisms → Bacteria → Acidobacteria	3596	Open in IMG/M
3300010398\|Ga0126383_11238796	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300011271\|Ga0137393_10188478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	1737	Open in IMG/M
3300011271\|Ga0137393_11331251	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300012189\|Ga0137388_11136651	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300012201\|Ga0137365_11215997	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300012205\|Ga0137362_10230764	All Organisms → cellular organisms → Bacteria → Acidobacteria	1597	Open in IMG/M
3300012205\|Ga0137362_11546346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	550	Open in IMG/M
3300012209\|Ga0137379_10104463	All Organisms → cellular organisms → Bacteria → Acidobacteria	2726	Open in IMG/M
3300012211\|Ga0137377_11010075	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300012362\|Ga0137361_10105513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2459	Open in IMG/M
3300012362\|Ga0137361_11958297	Not Available	502	Open in IMG/M
3300012683\|Ga0137398_10573647	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300012923\|Ga0137359_10130459	All Organisms → cellular organisms → Bacteria → Acidobacteria	2234	Open in IMG/M
3300012927\|Ga0137416_11018967	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012931\|Ga0153915_10630046	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300012931\|Ga0153915_10866478	All Organisms → cellular organisms → Bacteria → Acidobacteria	1049	Open in IMG/M
3300012944\|Ga0137410_10004665	All Organisms → cellular organisms → Bacteria → Proteobacteria	9329	Open in IMG/M
3300012971\|Ga0126369_10614035	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300012971\|Ga0126369_12755214	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300015054\|Ga0137420_1494005	All Organisms → cellular organisms → Bacteria → Acidobacteria	2523	Open in IMG/M
3300015264\|Ga0137403_11151358	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300016270\|Ga0182036_10874764	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300016319\|Ga0182033_12092725	Not Available	516	Open in IMG/M
3300016341\|Ga0182035_10664360	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300017659\|Ga0134083_10461461	Not Available	563	Open in IMG/M
3300017822\|Ga0187802_10413722	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300017823\|Ga0187818_10232153	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300017930\|Ga0187825_10386821	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300017933\|Ga0187801_10415368	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300017944\|Ga0187786_10141813	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300017959\|Ga0187779_11271426	Not Available	520	Open in IMG/M
3300017973\|Ga0187780_10738015	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300017975\|Ga0187782_11066150	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300018015\|Ga0187866_1042613	All Organisms → cellular organisms → Bacteria → Acidobacteria	2108	Open in IMG/M
3300018088\|Ga0187771_11076144	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300018088\|Ga0187771_11910510	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300018090\|Ga0187770_10034794	All Organisms → cellular organisms → Bacteria	3550	Open in IMG/M
3300018090\|Ga0187770_11790827	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300018433\|Ga0066667_10273344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1296	Open in IMG/M
3300018468\|Ga0066662_10300159	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300018468\|Ga0066662_11181240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	773	Open in IMG/M
3300018482\|Ga0066669_11660334	Not Available	585	Open in IMG/M
3300019789\|Ga0137408_1410658	All Organisms → cellular organisms → Bacteria → Acidobacteria	2127	Open in IMG/M
3300020580\|Ga0210403_11345641	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300020581\|Ga0210399_10274554	All Organisms → cellular organisms → Bacteria → Acidobacteria	1407	Open in IMG/M
3300020583\|Ga0210401_10043389	All Organisms → cellular organisms → Bacteria	4257	Open in IMG/M
3300021168\|Ga0210406_10308971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300021180\|Ga0210396_10905833	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300021180\|Ga0210396_10988627	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300021402\|Ga0210385_10856710	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300021404\|Ga0210389_10038722	All Organisms → cellular organisms → Bacteria	3658	Open in IMG/M
3300021404\|Ga0210389_10128770	All Organisms → cellular organisms → Bacteria → Acidobacteria	1958	Open in IMG/M
3300021405\|Ga0210387_10494667	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300021407\|Ga0210383_10444543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1119	Open in IMG/M
3300021433\|Ga0210391_11407256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	536	Open in IMG/M
3300021479\|Ga0210410_10632825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300021559\|Ga0210409_10117498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2447	Open in IMG/M
3300021559\|Ga0210409_10142572	All Organisms → cellular organisms → Bacteria → Acidobacteria	2197	Open in IMG/M
3300021559\|Ga0210409_10561079	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300024227\|Ga0228598_1098987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	588	Open in IMG/M
3300024323\|Ga0247666_1038152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	990	Open in IMG/M
3300025905\|Ga0207685_10252214	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300025916\|Ga0207663_10181405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1504	Open in IMG/M
3300026318\|Ga0209471_1025603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_61_5	2931	Open in IMG/M
3300026320\|Ga0209131_1142935	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300026335\|Ga0209804_1114041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1231	Open in IMG/M
3300026342\|Ga0209057_1212985	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300026490\|Ga0257153_1111914	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300026514\|Ga0257168_1082056	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300026523\|Ga0209808_1237293	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300026557\|Ga0179587_10003491	All Organisms → cellular organisms → Bacteria	7610	Open in IMG/M
3300026557\|Ga0179587_10896786	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300026557\|Ga0179587_11106449	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300026868\|Ga0207818_1024925	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300026880\|Ga0209623_1016387	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300026942\|Ga0207783_1005722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	1303	Open in IMG/M
3300027074\|Ga0208092_108484	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300027587\|Ga0209220_1020365	All Organisms → cellular organisms → Bacteria → Acidobacteria	1772	Open in IMG/M
3300027643\|Ga0209076_1041440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1297	Open in IMG/M
3300027671\|Ga0209588_1276954	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300027681\|Ga0208991_1146224	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300027738\|Ga0208989_10084430	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300027765\|Ga0209073_10013689	All Organisms → cellular organisms → Bacteria → Acidobacteria	2262	Open in IMG/M
3300027821\|Ga0209811_10163389	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300027846\|Ga0209180_10271688	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300027855\|Ga0209693_10291919	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300027879\|Ga0209169_10563661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	597	Open in IMG/M
3300027882\|Ga0209590_10883692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	564	Open in IMG/M
3300027889\|Ga0209380_10482519	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300027895\|Ga0209624_10108896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1813	Open in IMG/M
3300027898\|Ga0209067_10439228	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300028781\|Ga0302223_10160675	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300030524\|Ga0311357_10619055	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300030879\|Ga0265765_1013941	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	923	Open in IMG/M
3300030945\|Ga0075373_11565971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300030991\|Ga0073994_10010994	All Organisms → cellular organisms → Bacteria → Acidobacteria	2260	Open in IMG/M
3300031231\|Ga0170824_107731045	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300031231\|Ga0170824_125336626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1825	Open in IMG/M
3300031231\|Ga0170824_125357194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	515	Open in IMG/M
3300031715\|Ga0307476_10924044	Not Available	644	Open in IMG/M
3300031718\|Ga0307474_11587093	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300031720\|Ga0307469_10868527	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300031736\|Ga0318501_10315680	Not Available	836	Open in IMG/M
3300031744\|Ga0306918_10226382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	1419	Open in IMG/M
3300031753\|Ga0307477_10983522	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031765\|Ga0318554_10310234	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300031879\|Ga0306919_10025547	All Organisms → cellular organisms → Bacteria → Proteobacteria	3647	Open in IMG/M
3300031879\|Ga0306919_10504037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	933	Open in IMG/M
3300031879\|Ga0306919_11290370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	553	Open in IMG/M
3300031879\|Ga0306919_11528807	Not Available	502	Open in IMG/M
3300031941\|Ga0310912_11134869	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300031942\|Ga0310916_10131116	All Organisms → cellular organisms → Bacteria → Acidobacteria	2050	Open in IMG/M
3300031942\|Ga0310916_10278274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	1414	Open in IMG/M
3300031962\|Ga0307479_10066979	All Organisms → cellular organisms → Bacteria	3463	Open in IMG/M
3300031962\|Ga0307479_10526557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1165	Open in IMG/M
3300031962\|Ga0307479_10829693	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300031962\|Ga0307479_11007905	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300031962\|Ga0307479_11023355	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300032001\|Ga0306922_10409236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300032001\|Ga0306922_10538987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1241	Open in IMG/M
3300032052\|Ga0318506_10393728	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032091\|Ga0318577_10006931	All Organisms → cellular organisms → Bacteria → Proteobacteria	4275	Open in IMG/M
3300032174\|Ga0307470_10283120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1114	Open in IMG/M
3300032180\|Ga0307471_100325448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1636	Open in IMG/M
3300032180\|Ga0307471_102862773	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300032261\|Ga0306920_103366080	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300032898\|Ga0335072_11452839	Not Available	589	Open in IMG/M
3300033004\|Ga0335084_10030606	All Organisms → cellular organisms → Bacteria	5506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.22%
Host-Associated	Host-Associated	1.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.72%
Aquatic	Environmental → Aquatic	6.51%
Plants	Host-Associated → Plants	1.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.53%
Freshwater	Environmental → Aquatic → Freshwater	4.73%
Sediment	Environmental → Aquatic → Sediment	1.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.78%
Peat	Environmental → Terrestrial → Peat	1.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.37%
Loam	Environmental → Terrestrial → Soil → Loam	10.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.18%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.37%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.59%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.37%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.37%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.18%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.18%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.59%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001565	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026880	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300027074	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1013040992	3300000364	Soil	GSGDKIPVVNGVAIPGPTRLNDGDLVELSGVRLNFIVRE*
JGI1027J12803_1063533676	3300000955	Soil	PGDKVPTVNGAPIQGPVRLNDGDLIEVSGVRLNFIFRE*
JGI12683J13190_10018341	3300001089	Forest Soil	GYYIGPGDKTPLVNSKPIQGPVRLNDGDVIEICGLRLSFVFRE*
A35518A_10255861	3300001565	Permafrost	KVPSVNGAPITGQVLLKDGDKIAVSGVRLHFIFRD*
JGI25615J43890_10006233	3300002910	Grasslands Soil	GYYIGPGDKTPLVNSKPIQGPARLNDGDVIEICGLRLSFSFRE*
Ga0066688_106177942	3300005178	Soil	GPGDKVPSVNGRFIGGPTRLNDGDLIEVSGVKLNFIFRE*
Ga0066671_103217703	3300005184	Soil	LGPGDKVPSVNGRPIGGPTRLNDGDLIDVSGVKLNFIFRE*
Ga0066388_1060436802	3300005332	Tropical Forest Soil	GYYLGTGTKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE*
Ga0066682_108018291	3300005450	Soil	GPGDKTPNINGTPIAGPVRLNDGDLVEVSGVRLNFVFRG*
Ga0066699_101871272	3300005561	Soil	VPSVNGRPIGGPTRLNDGDVIEVSGVRLNFIFRE*
Ga0066705_103390932	3300005569	Soil	GDKVPSINGKPITGPVRLNDGDLVEVSGVRLNFVFRE*
Ga0066903_1029813471	3300005764	Tropical Forest Soil	KIPVVNGSPIPGPVRLNDGDTIEICGVRMNFVIRE*
Ga0066903_1044878752	3300005764	Tropical Forest Soil	FLGPGDKVPSVNGRLIGGPTRLNTGDVIEVSGVKLNFIFRE*
Ga0070766_105677922	3300005921	Soil	GPGDKVPNVNGTPIHGPVRLNDGDLIEVSGVRLNFIFRE*
Ga0075015_1000594044	3300006102	Watersheds	VGPGDKTPAVNGTPIPGPTKLNSGDVIEVSGVRLNFVIRE*
Ga0075015_1004217972	3300006102	Watersheds	GDKVPVVNGNPISGTVRLNDGDLIEVCGVRMNFIFRE*
Ga0066665_101753522	3300006796	Soil	YYLGPGDKVPKINGAPVSGPVRLNDGDLVEVSGVRLNFIFRE*
Ga0066659_104304933	3300006797	Soil	YYIGPGDKVPKVNGTPVSGPVRLNDGDLVEVSGVRLNFIFRE*
Ga0079220_100327221	3300006806	Agricultural Soil	GPGDKVPTVNGRLIGGPTRLNDGDLIEVSGVKLNFIFRE*
Ga0075425_1006562492	3300006854	Populus Rhizosphere	GYYVGSGAKVPAVNGVAISGPTKLNDGDLIEVAGIRLNFIVRE*
Ga0099791_101103482	3300007255	Vadose Zone Soil	LGPGDKVPNVNGTPISGPVRLNDGDLVEVSGVRLNFIFRE*
Ga0099794_100191171	3300007265	Vadose Zone Soil	KVPNINGTPISGPVRLNDGDLLEVSGVRLNFIFRE*
Ga0099794_103903782	3300007265	Vadose Zone Soil	YLGPGDKVPRINGNPISGPVRLNDGDLVEVSGVRLNFLFRE*
Ga0099829_111191352	3300009038	Vadose Zone Soil	DGYYLGPGDKMPSINGTPISGPVRLSDGDIVEVSGVRLNFIFRE*
Ga0099829_116880032	3300009038	Vadose Zone Soil	KVPRVNGTPITGTVRLNDGDLIEICGVRMNFIFRE*
Ga0099830_104421681	3300009088	Vadose Zone Soil	KVPKVNGTPVSGPVRLNDGDLVEVSGVRLNFIFRE*
Ga0099830_115305811	3300009088	Vadose Zone Soil	TPSVNGVRLRGTLRLTDGDVIEVCGVRMNFLFRK*
Ga0099830_115638793	3300009088	Vadose Zone Soil	GPGDKVPSVNGRPIRGPVRLNDGDLIEVSGVRLNFIFRE*
Ga0099828_101888332	3300009089	Vadose Zone Soil	LGPGDKVPIVNGTPIPGPVRLSDGDVIQVSGVRLSFVFRE*
Ga0105250_103073282	3300009092	Switchgrass Rhizosphere	GSGARVPAVNGVAIPGPTRLNDGDLIEVAGIRLNFIVRE*
Ga0066709_1019936452	3300009137	Grasslands Soil	SGDKVPSINGKPITGPVRLNDGDLVEVSGVRLNFVFRE*
Ga0116103_10858221	3300009615	Peatland	TGDKVPTVNSTPIPGPTRLNDGDLIEICGVRLNFIFRE*
Ga0126384_111355511	3300010046	Tropical Forest Soil	GPGDKVPKVNGAPITGPKKLNDGDVIEVSGLRMNFIFRE*
Ga0126373_100492273	3300010048	Tropical Forest Soil	KIPSVNGNPIPGPTKLNDGDLIEVAGVRLNFIVRE*
Ga0134067_100180902	3300010321	Grasslands Soil	YLGAGDKVPKINGAPISGQVRLNDGDLVEVCGVRLNFVFRE*
Ga0134064_102188602	3300010325	Grasslands Soil	DKVPSINGKPITGPVRLNDGDLVEVSGVRLNFVFRE*
Ga0134063_101865562	3300010335	Grasslands Soil	GSGDKVPSINGKPITGPVRLNDGDLVEVSGVRLNFVFRE*
Ga0074046_103074472	3300010339	Bog Forest Soil	GYYLVAGDKIPSVNAAPISGPVRLNDGDLIEICGVRVNFIFRE*
Ga0126372_131498831	3300010360	Tropical Forest Soil	VPTVNGTPIPGPVRLNDGDVIEVAGMRLNFIFRD*
Ga0126379_122353791	3300010366	Tropical Forest Soil	DKVPLVNGRLIGGPTRLNTGDVIEVSGVKLNFIFRE*
Ga0126381_1001063691	3300010376	Tropical Forest Soil	VPSVNGSPIHGPIRLNDGDVIEVCGVGLNFIFRE*
Ga0126383_112387962	3300010398	Tropical Forest Soil	TGDTVPMVNGTPIPGTVRLNDGDLIEVCGVRMNFIFRE*
Ga0137393_101884781	3300011271	Vadose Zone Soil	KVPSVNGRPIRGPVRLNDGDLIEVSGVRLNFIFRE*
Ga0137393_113312511	3300011271	Vadose Zone Soil	DDGYYLGPGDKVPKVNGTPVSGPVRLNDGDLVEVSGVRLNFIFRE*
Ga0137388_111366511	3300012189	Vadose Zone Soil	YYIGPGDKTPLVNSKPIQGPVRLNDGDVIEVCGLRLSFAFRE*
Ga0137365_112159972	3300012201	Vadose Zone Soil	GDKTPNINGTPIAGPVRLNDGDLVEVSGVRLNFVFRG*
Ga0137362_102307642	3300012205	Vadose Zone Soil	DGYYLGPGDKAPKINGKSISGPVRLNDGDLIEVSGVRLNFIFRE*
Ga0137362_115463462	3300012205	Vadose Zone Soil	DKVPSVNGRPIRGPVRLNDGDLIEVSGVRLNFIFRE*
Ga0137379_101044633	3300012209	Vadose Zone Soil	DGYFLGPGDKVPSVNGRPIGGPTRLNDGDLIEVSGVKLNFIYRE*
Ga0137377_110100752	3300012211	Vadose Zone Soil	GYYLGPGDKVPSVNGRPIRGPVRLNDGDLIEVSGVRLNFIFRE*
Ga0137361_101055131	3300012362	Vadose Zone Soil	GDKTPLVNSKPIQGPARLNDGDVIEVCGLRLSFVFRE*
Ga0137361_119582971	3300012362	Vadose Zone Soil	DKTPRVNSKPIHGPVRLNDGDVIEICGLRLSFVFRE*
Ga0137398_105736471	3300012683	Vadose Zone Soil	GYYLGPGDKVPNVNGAPIAGPVRLNDGDLVEVSGVRLSFIFRE*
Ga0137359_101304591	3300012923	Vadose Zone Soil	GYYIGPGDKIPTLNGAPIPGPTRLNDGDIVEVCGIRMNFIFRE*
Ga0137416_110189671	3300012927	Vadose Zone Soil	IGPADKTPLVNDKPIQGPVRLNDGDVIEVCGLRLNFLFRE*
Ga0153915_106300462	3300012931	Freshwater Wetlands	GPGDKIPTVNGMPIHGPTRLNDGDLIEVCGVRLNFFFRE*
Ga0153915_108664781	3300012931	Freshwater Wetlands	GDKIPTVNGMPIHGPTRLNDGDLIEVCGVRLNFFFRE*
Ga0137410_100046656	3300012944	Vadose Zone Soil	PGDKLPNINGTPISGQVRLNDGDLVEISGVRLNFIFRE*
Ga0126369_106140351	3300012971	Tropical Forest Soil	RDDGYFLGPGDKVPSVNGRLIGGPTRLNTGDVIEVSGVKLNFIFRE*
Ga0126369_127552142	3300012971	Tropical Forest Soil	LGPGDKVPSVNGRAIAGPTRLNDGDLIEVSGVKLNFIFRE*
Ga0137420_14940054	3300015054	Vadose Zone Soil	VPNINGTPISGPVRLNDGDLVEVSGVRLNFIFRE*
Ga0137403_111513581	3300015264	Vadose Zone Soil	YYLGPGDKVPTINGSPIQGPVRLNDGDLIEVSGVRLNFIFRE*
Ga0182036_108747641	3300016270	Soil	YYLGTGTKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0182033_120927252	3300016319	Soil	YYLGTGSKIPSVNGAPIQGPVRLNDGDLIEISGIRMNFVFRE
Ga0182035_106643602	3300016341	Soil	QIPAVNGVAIGGPTKLNDGDLIEVAGIRVNFIVRE
Ga0134083_104614611	3300017659	Grasslands Soil	DKVPSINGKPITGPVRLSDGDLVEVSGVRLNFVFRE
Ga0187802_104137221	3300017822	Freshwater Sediment	GDKMPLVNGKPIPGPSRLNDGDLTEVCRVRMNFVYRE
Ga0187818_102321531	3300017823	Freshwater Sediment	LGPGDKTPTVNGTLIPGPVRLNDGDLIEVSGVRLNFIFRE
Ga0187825_103868212	3300017930	Freshwater Sediment	FYIGPGDKVPSVNGSPIHGPLRLSDGDVIEVSGVRLNFIFRE
Ga0187801_104153682	3300017933	Freshwater Sediment	GDKVPTVNGTPIPGTVRLNDGDLIEVCGVRLNFIFRE
Ga0187786_101418131	3300017944	Tropical Peatland	GDKVPSVNGTPIPGTVRLNDGDLIEVCGVRMNFIFRE
Ga0187779_112714261	3300017959	Tropical Peatland	KIPSVNGKPITSPVRLNDGDVIEVCGVKLNFIVRE
Ga0187780_107380151	3300017973	Tropical Peatland	DGYYLGTGDKVPTINGTPIQGSTRLNDGDLIEVCGVRLNFIFRE
Ga0187782_110661501	3300017975	Tropical Peatland	YLGPGDKVPSVNGTPIPGPVRLNDGDLIEVSGIKLNFIFRE
Ga0187866_10426131	3300018015	Peatland	GAGERTPTLNYMPIHGPTRLNDGDMIEVCGVRMSFLIRE
Ga0187771_110761442	3300018088	Tropical Peatland	GTGAKIPMVNGSPIQGPVRLNDGDLIEVCGIRMNFVFRE
Ga0187771_119105101	3300018088	Tropical Peatland	TGDKVPTINGTPIQGSTRLNDGDLIEVCGVRLNFIFRE
Ga0187770_100347941	3300018090	Tropical Peatland	LGTGDKVPTINGTPIQGSTRLNDGDLIEVCGVRLNFIFRE
Ga0187770_117908272	3300018090	Tropical Peatland	DKVPSVNGTPIPGPVRLNDGDLIEVSGIKLNFIFRE
Ga0066667_102733443	3300018433	Grasslands Soil	RYGGYFLGPGDKVPSVNGRPIGGPTRLNDGDLIEVSGVKLNFIFRE
Ga0066662_103001591	3300018468	Grasslands Soil	YYLGPGDKVPKVNDTPVSGPVRLNDGDLIEVSAVRLSFIFRE
Ga0066662_111812402	3300018468	Grasslands Soil	GDKVPSVNGRLIGGPTRLNDGDLIEVSGVKLNFIFRE
Ga0066669_116603341	3300018482	Grasslands Soil	KVPSINGKPITGPVRLNDGDLVEVSGVRLNFVFRE
Ga0137408_14106582	3300019789	Vadose Zone Soil	PGAKTPAVNGTPIAGPVRLNDGDLIEVSGVRMNFIFRE
Ga0210403_113456411	3300020580	Soil	SGDKIPTVNGTPISGTVRLNDGDLIDVCGVRLNFIFRE
Ga0210399_102745541	3300020581	Soil	KMPTVNGAPITGPVRLNDGDVIEISGVRMNFIFRE
Ga0210401_100433891	3300020583	Soil	KTPLVNDKPIHGPARLNDGDVIEICGLRLNFLFRE
Ga0210406_103089712	3300021168	Soil	PGDKMPTVNGVPITGPARLSDGDVIEVSGVRMNFIFRE
Ga0210396_109058331	3300021180	Soil	SKIPTVNGAPIQGAVRLNDGDLIEVCGIRMNFIVRE
Ga0210396_109886272	3300021180	Soil	GDKVPTVNGTPITGTVRLNDGDLIEICGVRMNFIFRE
Ga0210385_108567102	3300021402	Soil	GDKVPNVNGTPIPGPVRLSDGDLIEVSGVRLNFIFRE
Ga0210389_100387223	3300021404	Soil	KMPTVNGTAITGPVRLNDGDVIEVCGVRMNFIFRE
Ga0210389_101287701	3300021404	Soil	DGYYIGPGDKMPTVNGTPITGPVRLNDGDLIEVSGVRMNFIYRE
Ga0210387_104946672	3300021405	Soil	GDKVPKVNGASITGPMRLNDGDVIEVTGLRMNFIFRE
Ga0210383_104445431	3300021407	Soil	KMPTVNGTSITGPVRLNDGDLIEICGVRMNFVFRE
Ga0210391_114072561	3300021433	Soil	FYLGPGDKVPNVNGTPIPGPVRLNDGDLIEVSGVRLNFIFRE
Ga0210410_106328251	3300021479	Soil	DDGYYIGPGDKMPIVNGTPITGPVRLNDGDVIEVSGVRMNFIFRE
Ga0210409_101174982	3300021559	Soil	LGPGDKTPLVNDKPIHGPARLNDGDVIEICGLRLNFLFRE
Ga0210409_101425722	3300021559	Soil	GYYLGPGDKVPNINGAPISGPVRLNDGDLVEVSGVRLSFIFRE
Ga0210409_105610791	3300021559	Soil	GDKVPTVNGMAISGPVRLNDGDLIEICGLRMNFVFRD
Ga0228598_10989871	3300024227	Rhizosphere	GDKMPTVNGAPITGPVRLNDGDLIEVSGVRMNFVFRE
Ga0247666_10381522	3300024323	Soil	YYIGPGDKMPLVNGKPITGPVRLNDGDVIEVGGARMNFVYRE
Ga0207685_102522142	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	YYLGPAAKTPLVNDKPIQGPVRLNNGDVIEVCGLRLNFLFRE
Ga0207663_101814051	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DGYYIGSGDKIPVVNGVAIPGPTRLDDGDLVEVSGVRLNFIVRE
Ga0209471_10256032	3300026318	Soil	GSGDKVPSINGKPITGPVRLNDGDLVEVSGVRLNFVFRE
Ga0209131_11429352	3300026320	Grasslands Soil	GPGDKIPTVNGAPIHGPKRLNDGDIVEVCGVRMNFIFRE
Ga0209804_11140412	3300026335	Soil	DKVPSINGKPITGPVRLNDGDLVEVSGVRLNFVFRE
Ga0209057_12129852	3300026342	Soil	DGYYIGSGDKIPVVNGVAIPGPTRLNDGDVVELSGVRLNFIVRE
Ga0257153_11119141	3300026490	Soil	RDDGYYIGSGDKVPVVNGVSIPGPTKLDDGDLVEVSGVRLNFIVRE
Ga0257168_10820562	3300026514	Soil	YIGPGDKTPLVNSKPIHGPVRLNDGDVIEVCGLRLNFMFRE
Ga0209808_12372931	3300026523	Soil	LGAGDKVPKINGAPISGQVRLNDGDLVEVCGVRLNFVFRE
Ga0179587_100034915	3300026557	Vadose Zone Soil	LGPGDKVPRINGNPISGPVRLNDGDLVEVSGVRLNFIFRE
Ga0179587_108967862	3300026557	Vadose Zone Soil	YYLGTGDKVPRVNGTPITGTVRLNDGDLIEICGVRMNFIFRE
Ga0179587_111064491	3300026557	Vadose Zone Soil	KVPNINGTPISGPVRLNDGDLVEVSGVRLNFIFRE
Ga0207818_10249252	3300026868	Tropical Forest Soil	KIPLVNGAPIQGPVRLNDGDLIEVSGIRMNFIFRE
Ga0209623_10163872	3300026880	Forest Soil	LGAGDKVPSVNGSPIQGPVQLKDGDQVEVCGVRLNFIFRE
Ga0207783_10057222	3300026942	Tropical Forest Soil	YYLGTGAKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0208092_1084842	3300027074	Forest Soil	GPGDKVPAVNGAPIHGPVRLNDGDVIEVGGVRLNFIFRE
Ga0209220_10203651	3300027587	Forest Soil	GPGDKVPNVNGTPISGPVRLKDGDLVEVSGVRLNFIFRE
Ga0209076_10414401	3300027643	Vadose Zone Soil	GYYLGPGDKVPHVNGAPIQGPVRLNDGDLIEVSGVRLNFIFRG
Ga0209588_12769541	3300027671	Vadose Zone Soil	GYYLGPGDKVPKINGNPISGPVRLNDGDLVEVSGVRLNFLFRE
Ga0208991_11462241	3300027681	Forest Soil	GPGEKVPSVNGSPVTGQVLLKDGDLIDVCGVRLKFIFRD
Ga0208989_100844301	3300027738	Forest Soil	IGPGEKVPSVNGSPVTGQVLLKDGDLIDVCGVRLKFIFRD
Ga0209073_100136891	3300027765	Agricultural Soil	DKVPTVNGRLIGGPTRLNDGDLIEVSGVKLNFIFRE
Ga0209811_101633891	3300027821	Surface Soil	YYIGSGDKIPVVNGNPIPGPTHLNDGDLIEVSGIRLNFIVRE
Ga0209180_102716881	3300027846	Vadose Zone Soil	GPGDKVPSVNGRPIRGPVRLNDGDLIEVSGVRLNFIFRE
Ga0209693_102919192	3300027855	Soil	PGDKMPLVNGAAITGPVRLNDGDVIEISGVRMNFVYRE
Ga0209169_105636612	3300027879	Soil	GYYIGPGDKMPLVNGAPITGPVRLNDGDLIEVSGVRMNFVFRE
Ga0209590_108836921	3300027882	Vadose Zone Soil	YLGPGDKVPSVNGRPIRGPVRLNDGDLIEVSGVRLNFIFRE
Ga0209380_104825191	3300027889	Soil	GPGDKVPNVNGTPIHGPVRLNDGDLIEVSGVRLNFIFRE
Ga0209624_101088961	3300027895	Forest Soil	VGPGDKVPVVNGAPITGPLRLNDGDVVEVCGLRMNFIFRD
Ga0209067_104392282	3300027898	Watersheds	YLGTGDKVPVVNGNPISGTVRLNDGDLIEVCGVRMNFIFRE
Ga0302223_101606751	3300028781	Palsa	GYYVVAGDKIPTVNGSPINGPVRLNDGDLIEISGVRLNFIFRE
Ga0311357_106190552	3300030524	Palsa	GYYIVAGDKIPTVNSAPISGPVRLNDGDLIEICGVRLNFIFRE
Ga0265765_10139411	3300030879	Soil	GPGDKMPTVNGTPITGPVRLSDGDLIEICGVRMNFVFRE
Ga0075373_115659711	3300030945	Soil	DRVPAVNGTPISGAVRLNDGDLIEVCGVRLNFIIRE
Ga0073994_100109942	3300030991	Soil	DDGYYLGPGDKVPNINGTPISGPVRLNDGDLVEVSGVRLNFIFRG
Ga0170824_1077310452	3300031231	Forest Soil	AGSKVPTVNGIPVTGQVQLKDGDVVAVCGVRLNFIFRD
Ga0170824_1253366262	3300031231	Forest Soil	DKMPTVNGAAITGPVRLNDGDVIEISGVRMNFVFRE
Ga0170824_1253571942	3300031231	Forest Soil	DKVPHVNGAPIQGPVRLNDGDLIEVSGVRLNFIFRE
Ga0307476_109240441	3300031715	Hardwood Forest Soil	GPGDKIPKVNGAPITGPKKLNDGDVIEVSGLRMNFIFRE
Ga0307474_115870931	3300031718	Hardwood Forest Soil	GTGDKVPTVNGTPITGTVRLNDGDLIEVCGVRMNFIFRE
Ga0307469_108685271	3300031720	Hardwood Forest Soil	GYYIGPGDKMPLVNGKPITGPVRLNDGDVIEVGGARMSFVYRE
Ga0318501_103156801	3300031736	Soil	GYYLGTGAKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0306918_102263822	3300031744	Soil	TGAKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0307477_109835222	3300031753	Hardwood Forest Soil	YIGPGDKTPLVNSKPIQGPVRLNNGDTIEVCGLKLNFVFRE
Ga0318554_103102342	3300031765	Soil	VGSGAQIPAVNGVAIGGPTKLNDGDLIEVAGIRVNFIVRE
Ga0306919_100255471	3300031879	Soil	DKVPSVNGRLIGGPTRLNDGDVIEVSGVKLNFIFRE
Ga0306919_105040371	3300031879	Soil	AKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0306919_112903702	3300031879	Soil	DGYYLGPGDKVPTINGRPISGPTRLNDGDLIEVSGVKLNFIFRE
Ga0306919_115288071	3300031879	Soil	LGTGAKIPSVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0310912_111348691	3300031941	Soil	KIPTVNGSPIQGPVRLNDGDLIEVCGIRMNFVFRE
Ga0310916_101311162	3300031942	Soil	TGAKIPTVNGSPIQGPVRLNDGDLIEVCGIRMNFVFRE
Ga0310916_102782741	3300031942	Soil	GAKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0307479_100669792	3300031962	Hardwood Forest Soil	GPGDKVPNVNGKPISGPVRLSDGDLVEVSGVRLNFIFRE
Ga0307479_105265571	3300031962	Hardwood Forest Soil	GDKVPTVNGAPIPGPVRLNDGDLIEVSGVRLNFIFRE
Ga0307479_108296932	3300031962	Hardwood Forest Soil	YIGSGDKVPVVNGVSIPGPTRLDDGDLVEVSGVRLNFIVRE
Ga0307479_110079052	3300031962	Hardwood Forest Soil	YIGPGDKTPLVNSKPIQGPVRLNDGDVIEVCGLRLSFMFRE
Ga0307479_110233551	3300031962	Hardwood Forest Soil	YIGPGDKTPVVNSKAIQGPVRLNDGDVIEICGLRLSFAFRE
Ga0306922_104092361	3300032001	Soil	DDGYYIGSGDKVPIVNGVTIPGPTKLDDGDLVEVCGVRLNFIVRE
Ga0306922_105389872	3300032001	Soil	FLGPGDKVPSVNGRLIGGPTRLNDGDVIEVSGVKLNFIFRE
Ga0318506_103937282	3300032052	Soil	GTGAKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0318577_100069313	3300032091	Soil	LGPGDKVPSVNGRLIGGPTRLNDGDVIEVSGVKLNFIFRE
Ga0307470_102831201	3300032174	Hardwood Forest Soil	DKTPLVNDRPIQGPVRLNHGDVIEVCGLRLNFLFRE
Ga0307471_1003254482	3300032180	Hardwood Forest Soil	IGPGDKTPVVNSKPIQGPVRLNDGDVIEICGLRLSFAFRE
Ga0307471_1028627731	3300032180	Hardwood Forest Soil	DKVPNVNGAPIQGPVRLNDGDLIEVSGVRLNFIFRE
Ga0306920_1033660801	3300032261	Soil	GTKIPVVNGSPIPGPVRLNDGDLIEICGVRMNFVIRE
Ga0335072_114528391	3300032898	Soil	GDKVPSVNGTRIPGPVRLNDGDVIDVAGVRMNFLFRD
Ga0335084_100306064	3300033004	Soil	KVPSVNGNPIAGTVRLNDGDLIEVCGVRMNFIFRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036618

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences