NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F036485

Metagenome / Metatranscriptome Family F036485

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F036485
Family Type Metagenome / Metatranscriptome
Number of Sequences 170
Average Sequence Length 80 residues
Representative Sequence MDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSKRR
Number of Associated Samples 153
Number of Associated Scaffolds 170

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.04 %
% of genes near scaffold ends (potentially truncated) 24.71 %
% of genes from short scaffolds (< 2000 bps) 75.29 %
Associated GOLD sequencing projects 142
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (61.176 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.177 % of family members)
Environment Ontology (ENVO) Unclassified
(27.647 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(34.706 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 72.07%    β-sheet: 0.00%    Coil/Unstructured: 27.93%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 170 Family Scaffolds
PF03030H_PPase 56.47
PF00462Glutaredoxin 1.76
PF02781G6PD_C 1.76
PF04392ABC_sub_bind 1.18
PF14305ATPgrasp_TupA 1.18
PF11380Stealth_CR2 1.18
PF02776TPP_enzyme_N 1.18
PF00857Isochorismatase 1.18
PF00216Bac_DNA_binding 1.18
PF00561Abhydrolase_1 0.59
PF03033Glyco_transf_28 0.59
PF01476LysM 0.59
PF00487FA_desaturase 0.59
PF01119DNA_mis_repair 0.59
PF02190LON_substr_bdg 0.59
PF03241HpaB 0.59
PF13522GATase_6 0.59
PF00589Phage_integrase 0.59
PF03992ABM 0.59
PF03814KdpA 0.59
PF00479G6PD_N 0.59
PF02954HTH_8 0.59
PF09990DUF2231 0.59
PF02201SWIB 0.59
PF11382MctB 0.59
PF00496SBP_bac_5 0.59
PF01321Creatinase_N 0.59
PF02585PIG-L 0.59

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 170 Family Scaffolds
COG3808Na+ or H+-translocating membrane pyrophosphataseEnergy production and conversion [C] 56.47
COG0364Glucose-6-phosphate 1-dehydrogenaseCarbohydrate transport and metabolism [G] 2.35
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 1.18
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 1.18
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.18
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 1.18
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 0.59
COG0323DNA mismatch repair ATPase MutLReplication, recombination and repair [L] 0.59
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.59
COG2060K+-transporting ATPase, KdpA subunitInorganic ion transport and metabolism [P] 0.59
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 0.59
COG2368Aromatic ring hydroxylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.59
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.59
COG5531DNA-binding SWIB/MDM2 domainChromatin structure and dynamics [B] 0.59


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.18 %
All OrganismsrootAll Organisms38.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_8822566All Organisms → cellular organisms → Bacteria4339Open in IMG/M
3300000559|F14TC_100820694Not Available1824Open in IMG/M
3300000956|JGI10216J12902_121257569All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria658Open in IMG/M
3300001431|F14TB_100029518Not Available1517Open in IMG/M
3300002245|JGIcombinedJ26739_100111611Not Available2568Open in IMG/M
3300003324|soilH2_10041090All Organisms → cellular organisms → Bacteria → Proteobacteria5676Open in IMG/M
3300003347|JGI26128J50194_1004744All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300004463|Ga0063356_100877926All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300004479|Ga0062595_100030574All Organisms → cellular organisms → Bacteria2208Open in IMG/M
3300004479|Ga0062595_100463375Not Available936Open in IMG/M
3300005093|Ga0062594_100923497All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005174|Ga0066680_10579926Not Available704Open in IMG/M
3300005176|Ga0066679_10739467All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005294|Ga0065705_10207875All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300005332|Ga0066388_100468675All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300005338|Ga0068868_100033169All Organisms → cellular organisms → Bacteria3978Open in IMG/M
3300005354|Ga0070675_100632497Not Available972Open in IMG/M
3300005406|Ga0070703_10012050Not Available2448Open in IMG/M
3300005434|Ga0070709_10735688All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300005436|Ga0070713_102241803Not Available529Open in IMG/M
3300005440|Ga0070705_100251059Not Available1242Open in IMG/M
3300005444|Ga0070694_100001943All Organisms → cellular organisms → Bacteria12251Open in IMG/M
3300005459|Ga0068867_100915352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales790Open in IMG/M
3300005467|Ga0070706_100116055All Organisms → cellular organisms → Bacteria → Proteobacteria2493Open in IMG/M
3300005468|Ga0070707_100112456All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2641Open in IMG/M
3300005529|Ga0070741_10003263All Organisms → cellular organisms → Bacteria40800Open in IMG/M
3300005713|Ga0066905_100014556All Organisms → cellular organisms → Bacteria3935Open in IMG/M
3300005873|Ga0075287_1046862Not Available588Open in IMG/M
3300005875|Ga0075293_1008686Not Available1126Open in IMG/M
3300005876|Ga0075300_1029939All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300005876|Ga0075300_1070345Not Available527Open in IMG/M
3300005886|Ga0075286_1038783Not Available646Open in IMG/M
3300005921|Ga0070766_10489446All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300005937|Ga0081455_10000830All Organisms → cellular organisms → Bacteria39759Open in IMG/M
3300006050|Ga0075028_100265022Not Available947Open in IMG/M
3300006755|Ga0079222_10182720All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300006755|Ga0079222_10931988Not Available734Open in IMG/M
3300006806|Ga0079220_10155991Not Available1266Open in IMG/M
3300006806|Ga0079220_11563491Not Available569Open in IMG/M
3300006845|Ga0075421_100947260Not Available979Open in IMG/M
3300006852|Ga0075433_10009816All Organisms → cellular organisms → Bacteria → Proteobacteria7672Open in IMG/M
3300006854|Ga0075425_101448246Not Available776Open in IMG/M
3300006871|Ga0075434_101567198Not Available667Open in IMG/M
3300006881|Ga0068865_100907196Not Available767Open in IMG/M
3300006881|Ga0068865_101362945All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300006914|Ga0075436_100041528All Organisms → cellular organisms → Bacteria3174Open in IMG/M
3300007255|Ga0099791_10005617All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium5167Open in IMG/M
3300009053|Ga0105095_10219725Not Available1041Open in IMG/M
3300009087|Ga0105107_10190271Not Available1439Open in IMG/M
3300009088|Ga0099830_10197206Not Available1574Open in IMG/M
3300009088|Ga0099830_10301374Not Available1279Open in IMG/M
3300009098|Ga0105245_11218475Not Available801Open in IMG/M
3300009143|Ga0099792_10116556All Organisms → cellular organisms → Bacteria1428Open in IMG/M
3300009147|Ga0114129_10042071All Organisms → cellular organisms → Bacteria → Proteobacteria6434Open in IMG/M
3300009806|Ga0105081_1044139All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300009814|Ga0105082_1107872Not Available531Open in IMG/M
3300010362|Ga0126377_10501975Not Available1245Open in IMG/M
3300010362|Ga0126377_11203566Not Available828Open in IMG/M
3300010371|Ga0134125_11732853Not Available680Open in IMG/M
3300010396|Ga0134126_10067262All Organisms → cellular organisms → Bacteria4454Open in IMG/M
3300010399|Ga0134127_10068925All Organisms → cellular organisms → Bacteria2997Open in IMG/M
3300010400|Ga0134122_11349978Not Available724Open in IMG/M
3300011119|Ga0105246_10197811Not Available1560Open in IMG/M
3300012164|Ga0137352_1088731Not Available615Open in IMG/M
3300012203|Ga0137399_11100854Not Available669Open in IMG/M
3300012205|Ga0137362_10048363All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3455Open in IMG/M
3300012225|Ga0137434_1030346Not Available759Open in IMG/M
3300012357|Ga0137384_11084647Not Available642Open in IMG/M
3300012685|Ga0137397_10206468All Organisms → cellular organisms → Bacteria → Proteobacteria1462Open in IMG/M
3300012907|Ga0157283_10221326Not Available610Open in IMG/M
3300012918|Ga0137396_10121766All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1881Open in IMG/M
3300012927|Ga0137416_11536389Not Available605Open in IMG/M
3300012930|Ga0137407_11183855Not Available725Open in IMG/M
3300012931|Ga0153915_10086331All Organisms → cellular organisms → Bacteria3300Open in IMG/M
3300012931|Ga0153915_12698346Not Available581Open in IMG/M
3300012951|Ga0164300_10285323Not Available856Open in IMG/M
3300012955|Ga0164298_10027445Not Available2516Open in IMG/M
3300012960|Ga0164301_11047090Not Available645Open in IMG/M
3300013102|Ga0157371_10041313All Organisms → cellular organisms → Bacteria3292Open in IMG/M
3300015252|Ga0180075_1028672Not Available839Open in IMG/M
3300015371|Ga0132258_10351926All Organisms → cellular organisms → Bacteria3642Open in IMG/M
3300015371|Ga0132258_11355783All Organisms → cellular organisms → Bacteria1797Open in IMG/M
3300015374|Ga0132255_104869923Not Available569Open in IMG/M
3300017927|Ga0187824_10015310Not Available2235Open in IMG/M
3300017936|Ga0187821_10050660All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1489Open in IMG/M
3300017939|Ga0187775_10094887All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300017961|Ga0187778_10114688All Organisms → cellular organisms → Bacteria1681Open in IMG/M
3300017999|Ga0187767_10209056Not Available621Open in IMG/M
3300018031|Ga0184634_10514481Not Available533Open in IMG/M
3300018054|Ga0184621_10306657Not Available560Open in IMG/M
3300018060|Ga0187765_10707684Not Available662Open in IMG/M
3300018063|Ga0184637_10188359Not Available1267Open in IMG/M
3300018422|Ga0190265_11098413All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria916Open in IMG/M
3300018469|Ga0190270_11703711Not Available684Open in IMG/M
3300019377|Ga0190264_12289364Not Available507Open in IMG/M
3300019458|Ga0187892_10004664All Organisms → cellular organisms → Bacteria22691Open in IMG/M
3300019879|Ga0193723_1082602Not Available920Open in IMG/M
3300019885|Ga0193747_1033661Not Available1274Open in IMG/M
3300019997|Ga0193711_1016199Not Available941Open in IMG/M
3300020060|Ga0193717_1132160Not Available754Open in IMG/M
3300020579|Ga0210407_10252434All Organisms → cellular organisms → Bacteria1374Open in IMG/M
3300020580|Ga0210403_10545271All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300021086|Ga0179596_10118277Not Available1227Open in IMG/M
3300021086|Ga0179596_10654480Not Available532Open in IMG/M
3300022726|Ga0242654_10172969Not Available735Open in IMG/M
3300023072|Ga0247799_1007507All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300025160|Ga0209109_10420406All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22620Open in IMG/M
3300025885|Ga0207653_10037301All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300025907|Ga0207645_10039350All Organisms → cellular organisms → Bacteria3030Open in IMG/M
3300025910|Ga0207684_10000400All Organisms → cellular organisms → Bacteria57952Open in IMG/M
3300025910|Ga0207684_10366732Not Available1239Open in IMG/M
3300025917|Ga0207660_10833694Not Available752Open in IMG/M
3300025922|Ga0207646_10351386Not Available1332Open in IMG/M
3300025981|Ga0207640_10004523All Organisms → cellular organisms → Bacteria → Proteobacteria7547Open in IMG/M
3300026005|Ga0208285_1005581All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella feeleii870Open in IMG/M
3300026023|Ga0207677_10073550All Organisms → cellular organisms → Bacteria2421Open in IMG/M
3300026118|Ga0207675_101201237Not Available779Open in IMG/M
3300026285|Ga0209438_1000397All Organisms → cellular organisms → Bacteria13098Open in IMG/M
3300026285|Ga0209438_1003007All Organisms → cellular organisms → Bacteria → Proteobacteria5669Open in IMG/M
3300026340|Ga0257162_1000022All Organisms → cellular organisms → Bacteria8735Open in IMG/M
3300026340|Ga0257162_1040149Not Available585Open in IMG/M
3300026355|Ga0257149_1006642Not Available1436Open in IMG/M
3300026359|Ga0257163_1048344Not Available677Open in IMG/M
3300026481|Ga0257155_1016484Not Available1033Open in IMG/M
3300026482|Ga0257172_1110623Not Available505Open in IMG/M
3300026515|Ga0257158_1012581All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300026535|Ga0256867_10024473Not Available2562Open in IMG/M
3300027273|Ga0209886_1046898Not Available675Open in IMG/M
3300027332|Ga0209861_1066826Not Available529Open in IMG/M
3300027526|Ga0209968_1034401Not Available854Open in IMG/M
3300027725|Ga0209178_1199827Not Available707Open in IMG/M
3300027765|Ga0209073_10166048Not Available823Open in IMG/M
3300027787|Ga0209074_10257251Not Available681Open in IMG/M
3300027862|Ga0209701_10036482Not Available3181Open in IMG/M
3300027862|Ga0209701_10173493Not Available1302Open in IMG/M
3300027875|Ga0209283_10661278Not Available656Open in IMG/M
3300027909|Ga0209382_10812643Not Available994Open in IMG/M
3300027915|Ga0209069_10324505Not Available824Open in IMG/M
3300027952|Ga0209889_1105086Not Available563Open in IMG/M
3300027954|Ga0209859_1065664Not Available580Open in IMG/M
3300028047|Ga0209526_10089748All Organisms → cellular organisms → Bacteria2163Open in IMG/M
3300028587|Ga0247828_10677118Not Available639Open in IMG/M
3300028792|Ga0307504_10283196Not Available618Open in IMG/M
3300030006|Ga0299907_10347030Not Available1202Open in IMG/M
3300030619|Ga0268386_10096124Not Available2295Open in IMG/M
3300030620|Ga0302046_10724121Not Available804Open in IMG/M
3300031114|Ga0308187_10150720Not Available775Open in IMG/M
(restricted) 3300031150|Ga0255311_1078747Not Available704Open in IMG/M
(restricted) 3300031197|Ga0255310_10029096All Organisms → cellular organisms → Bacteria1428Open in IMG/M
3300031229|Ga0299913_10327667Not Available1519Open in IMG/M
3300031547|Ga0310887_11069226Not Available517Open in IMG/M
3300031720|Ga0307469_10973320Not Available790Open in IMG/M
3300031740|Ga0307468_101053567Not Available720Open in IMG/M
3300031820|Ga0307473_10247187All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300031858|Ga0310892_10680239Not Available704Open in IMG/M
3300031949|Ga0214473_10003326All Organisms → cellular organisms → Bacteria19513Open in IMG/M
3300031949|Ga0214473_10553959All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1275Open in IMG/M
3300032180|Ga0307471_102391717Not Available667Open in IMG/M
3300032770|Ga0335085_10001202All Organisms → cellular organisms → Bacteria58696Open in IMG/M
3300033412|Ga0310810_10960173Not Available739Open in IMG/M
3300033432|Ga0326729_1019079Not Available1135Open in IMG/M
3300033433|Ga0326726_10019942All Organisms → cellular organisms → Bacteria5828Open in IMG/M
3300033433|Ga0326726_10281299All Organisms → cellular organisms → Bacteria1556Open in IMG/M
3300033480|Ga0316620_12074032Not Available565Open in IMG/M
3300033486|Ga0316624_11997911Not Available538Open in IMG/M
3300034155|Ga0370498_065753All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella818Open in IMG/M
3300034257|Ga0370495_0238984Not Available592Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.18%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.88%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.12%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil4.12%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.12%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand3.53%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.35%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.35%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.35%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.76%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.76%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.76%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.76%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.76%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.18%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.18%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.18%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.18%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.18%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.18%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.18%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.18%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.18%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.18%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.18%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.18%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.18%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.59%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.59%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.59%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.59%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.59%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.59%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.59%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003347Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PMHost-AssociatedOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300005875Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101EnvironmentalOpen in IMG/M
3300005876Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401EnvironmentalOpen in IMG/M
3300005878Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104EnvironmentalOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009806Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012164Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026005Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026359Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-AEnvironmentalOpen in IMG/M
3300026481Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-AEnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026515Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-AEnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300027273Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027332Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027526Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027954Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPICI_021205602088090015SoilMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAERQRREALEQVVEQQKSRRR
F14TC_10082069423300000559SoilMGRSGVAVSLLALLVGVILGAAALSWWEGGRQSAEIETLKVRLADERGQVQAKIKQLTDELSVEKQRREALEQVQSPGRR*
JGI10216J12902_12125756923300000956SoilSLLALLIGVIIGAAALSWWEGGRQSADIETLKVRLADDRGQVQEKIKQLTDELNAEKQRSEALERVLSTTKQR*
F14TB_10002951823300001431SoilMGRSGVVVSLLALLVGVILGAAALSWWEGGRQSAEIETLKVRLADERGQVQAKIKQLTDELSVEKQRREALEQVQSPGRR*
JGIcombinedJ26739_10011161123300002245Forest SoilMDRPSVLGSLVALLIGLALGAAALSWWEGGRQSTEIESLKVRLADERGVVQAKVKQLSDELSAEKQRREALEQVVEQQKSGKRR*
soilH2_1004109083300003324Sugarcane Root And Bulk SoilMDRSSLIGSLLALLVGLAVGAAALSWWEGGRQSEDIETLKVQLADERGAVQAKVKQLTDELSAEKQRREALEQVIEQQKSNRR*
JGI26128J50194_100474413300003347Arabidopsis Thaliana RhizosphereMGRSGVVVSLLALLVGVILGAAALSWWEGGRQSADIEALKVRLADERGQVEAKIKQLTDELNVEKQRREALEQVQGAGRR*
Ga0063356_10087792623300004463Arabidopsis Thaliana RhizosphereMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAERQRREALEQVVEQQKSRRR*
Ga0062595_10003057423300004479SoilMDRSSLIGSLVALLIGLIVGAAALSWWEGGRQSAEIEGLKVRLADERGVVQAKVKQLTDELNAERQRREALEQVVEQQKSRRR*
Ga0062595_10046337533300004479SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVVEQQKSGKRR*
Ga0062594_10092349723300005093SoilMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK*
Ga0066680_1057992613300005174SoilMDRSSVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGIVQSKVKQLTDELNAEKQRREALEQVQQQSGKRR*
Ga0066679_1073946713300005176SoilMDRSSLIGSLVALLIGLIVGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGK
Ga0065705_1020787523300005294Switchgrass RhizosphereMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSAEIETLKVRLADDRGQVQARIKQLTDELNSEKQRREALEQVVQQAQSKRK*
Ga0066388_10046867533300005332Tropical Forest SoilMDRSSVIGSIVTLLIGLIIGAAALSWWEGGRQSADIEALKVRLADERGQVQTKVKQLTDELASEKQRREALEQIQQKSKSR*
Ga0068868_10003316923300005338Miscanthus RhizosphereMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSRRR*
Ga0070675_10063249723300005354Miscanthus RhizosphereMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAERQRREAL
Ga0070703_1001205023300005406Corn, Switchgrass And Miscanthus RhizosphereMDRSSVIGSLVALLIGLALGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR*
Ga0070709_1073568823300005434Corn, Switchgrass And Miscanthus RhizosphereMDRSSVIGSLVALLIGLALGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR*
Ga0070713_10224180313300005436Corn, Switchgrass And Miscanthus RhizosphereMDRSSLIGSLVALLIGLIVGAAALSWWEGGRQSAEIEGLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR*
Ga0070705_10025105923300005440Corn, Switchgrass And Miscanthus RhizosphereMDRSSVLGSLVALLIGLVLGAATLSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR*
Ga0070694_10000194393300005444Corn, Switchgrass And Miscanthus RhizosphereMDRSSVIGSLVALLIGLAAGAAALSWWEGGRQSAEIETLKVRLADERGAVQTKVKQLTDELGAEKQRREALEQIVEQEKSKRR*
Ga0068867_10091535223300005459Miscanthus RhizosphereSVFGSLLALLIGLAIGAAALSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK*
Ga0070706_10011605553300005467Corn, Switchgrass And Miscanthus RhizosphereMNRATVLGSLVALLLGLAVGAAALSWWEGGRQSAEIENLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVQNTKRR*
Ga0070707_10011245623300005468Corn, Switchgrass And Miscanthus RhizosphereMDRSSVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGVVQSKVKQLTDELNAEKQRREALEQVQQQSGKRR*
Ga0070741_10003263393300005529Surface SoilMDRSSLITSLVALLVGLAVGAAALSWWEGGRQSADIEALKLRLADERGAVLAKVKQLTDELNAEKQRREALEQVVEQQKSPRR*
Ga0066905_10001455633300005713Tropical Forest SoilMGRSGVVVSLLALLVGVILGAAALSWWEGGRQSAEIETLKVRLADERGQVQAKIKQLTDELSVEKQRREALEQVQSSGRR*
Ga0075287_104686223300005873Rice Paddy SoilMLGAVLAVLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGAVETKVKQLTDELGAEKQRREALEQIVEQQKSKRR*
Ga0075293_100868613300005875Rice Paddy SoilMLGAVLAVLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGAVQAKVKQLTDELSAEKQRREALEQIVEQEKQKSGKRR*
Ga0075300_102993913300005876Rice Paddy SoilMDRSSVIGSLVALLIGVILGAAALSWWEGGRQSADIETLKVRLADERGQVQTKVKQLTDELNSETQRREALEQVVKSKRR*
Ga0075300_107034513300005876Rice Paddy SoilMDRSSVIGSLVALLIGLAAGAAALSWWEGGRQSAEIETLKVRLADERGAVQTKVKQLTDELGAEKQRREALEQIVEQQKSKRR*
Ga0075297_100112213300005878Rice Paddy SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGAVETKAKQLTDELGAEKQ
Ga0075286_103878323300005886Rice Paddy SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGAVETKAKQLTDELGAEKQRREALEQIVEQQKSKRR*
Ga0070766_1048944623300005921SoilMNRSSVLVSLLALLVGVMLGAAALSWWEGGRQSADIEALKVRLADERGQVQSKIKELGDELSSEKQRREALEQVQGTKRR*
Ga0081455_10000830223300005937Tabebuia Heterophylla RhizosphereMERSSLLVSLLALLVGAILGATALSWWEGGRQSADIEDLKVKLADERGQVQSKIKQLGDELAVEKQRREALERVQRTGRQ*
Ga0075028_10026502223300006050WatershedsMDRSSVIGSLVALLIGLAIGAAALSWWEGGRQSAEIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVQQQSGKRR*
Ga0079222_1018272023300006755Agricultural SoilMDRSSLIGSLLALLVGLAVGAAALSWWEGGRQSEDIETLKVQLADERGAVQAKVKQLTDELSAEKQRREALEQVIEQQKSKRR*
Ga0079222_1093198823300006755Agricultural SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGAVQSKVKELTDELNAEKQRREALEQVVEQQKSKRR*
Ga0079220_1015599123300006806Agricultural SoilMDRSSVIGSIVALVVGLIIGAAALSWWEGGRQSADIEALKVRLADERGQVQTKVKQLTDELASEKQRREALEQIQQKSKSR*
Ga0079220_1156349123300006806Agricultural SoilMDRSSLIGSVGALLIGLIVGAAALSWWEGGRQSAEIEGLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR*
Ga0075421_10094726023300006845Populus RhizosphereMDRASLIGSLLALLIGLVVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSRRR*
Ga0075433_1000981623300006852Populus RhizosphereMDRSSLIGSVVALLIGLIVGAAALSWWEGGRQSAEIEGLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR*
Ga0075425_10144824613300006854Populus RhizosphereMDRSSLIGSVVALLIGLIVGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR*
Ga0075434_10156719823300006871Populus RhizosphereMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVE
Ga0068865_10090719623300006881Miscanthus RhizosphereMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAERQRREALEQVVEQQKSRR
Ga0068865_10136294523300006881Miscanthus RhizosphereLLALLIGLAIGAAALSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK*
Ga0075436_10004152813300006914Populus RhizosphereSAMDRSSLIGSVVALLIGLIVGAAALSWWEGGRQSAEIEGLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR*
Ga0099791_1000561753300007255Vadose Zone SoilMDRSSVLGSLVALLIGLVLGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR*
Ga0105095_1021972523300009053Freshwater SedimentMDRSSVLGSLVALLIGLAIGAAALSWWEGGRQSAEIEALKVRQADERGQVQAKIKQFTDELASEKQRRAALE
Ga0105107_1019027113300009087Freshwater SedimentMSRSGVFGSLLALLIGLAIGAAALSWWEGGRQSAEIETLKVRLADERGQVQAKIKQLTDELASEKQRREALEQVVQQAREKAQSGKRR*
Ga0099830_1019720623300009088Vadose Zone SoilMNRASVLGSLVALLIGLAAGAAALSWWEGGRQSAEIESLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVQSTKRR*
Ga0099830_1030137413300009088Vadose Zone SoilMDRSSVLGSLVALLIGLILGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR*
Ga0105245_1121847513300009098Miscanthus RhizosphereMAMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK*
Ga0099792_1011655623300009143Vadose Zone SoilMDRSSVLGSLVALLIGLVLGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQV
Ga0114129_1004207113300009147Populus RhizosphereRSSLIGSVGALLIGLIVGAAALSWWEGGRQSAEIEGLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR*
Ga0105081_104413923300009806Groundwater SandMDRASVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGQVQVKVKQLTDELNSEKQRREALEQVQSTKRR*
Ga0105082_110787223300009814Groundwater SandMDRASVLGSLVALLIGLAVGAAALSWWEGGRQSTEIESLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVVQQAQTGKRR*
Ga0126377_1050197533300010362Tropical Forest SoilMDRSSLIGSLLALLVGLVIGAAALSWWEGGRQSADIEALKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVIEQQKSKRR*
Ga0126377_1120356613300010362Tropical Forest SoilMERSSLLVSLLALLVGVIIGAAGLSWWEGGRQSTDIETLKVRLADERGRVQEKIKQITDELNAEKQRSEALERVLSTTKQR*
Ga0134125_1173285313300010371Terrestrial SoilMDRSSLVGSLVALLVGLAIGAAALSWWEGGRQNVEIEALKVRQADERGQVQGKIKQLSDELSSEKQRREALEQVVEQAKSGKKR*
Ga0134126_1006726223300010396Terrestrial SoilMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSTDIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSRRR*
Ga0134127_1006892533300010399Terrestrial SoilMAMDRSSVFGSLLALLIGLAIGAAVLSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK*
Ga0134122_1134997823300010400Terrestrial SoilVLGSLVALLIGLALGAAALSWWEGGRQSTEIEGLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR*
Ga0105246_1019781113300011119Miscanthus RhizosphereMDRASLIGSLLALLIGLVVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAERQRR
Ga0137352_108873113300012164SoilMGRSSVLGSLLALIVGLAIGAAALTWWEGGRQSVEIEALKVRQADERGQVQTKIKQFTDEINSEKQRREALEQVVQQAQS
Ga0137399_1110085413300012203Vadose Zone SoilMDRSSVLGSLVALLVGLVIGAAALSWWEGGRQSAEIEALKVRQADERGQVQAKVKQLTDELSSEKQRREAL
Ga0137362_1004836383300012205Vadose Zone SoilMDRSSVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGVVQSKVKQLTEELNAEKQRREALEQVQQQSGKRR*
Ga0137434_103034613300012225SoilMGRSSVLGSLVALLIGLAVGAAALSWWEGGRQSMEIEVLKVRLADERGPVQAKIKQLTDELNSEKQRREALEQVVQQAQSGKRR*
Ga0137384_1108464723300012357Vadose Zone SoilLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGIVQSKVKQLTDELNAEKQRREALEQVQQQSGKRR*
Ga0137397_1020646823300012685Vadose Zone SoilMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSAEIETVKVRLADERGQVQARIKQLTDELNSEKQRREALEQVVQQAQSKRK*
Ga0157283_1022132613300012907SoilMGRSGVVVSLLALLVGVILGAAALSWWEGGRQSADIETLKVRLADERGQVEAKIKQLTDELNVEKQRREALEQVQGAGRR*
Ga0157308_1031191113300012910SoilLVGVILGAAALSWWEGGRQSADIEALKVRLADERGQVEAKIKQLTDELNVEKQRREALEQVQGAGRR*
Ga0137396_1012176633300012918Vadose Zone SoilMDRSSVLGSLVALLIGLVLGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVQQQSGKRR*
Ga0137416_1153638923300012927Vadose Zone SoilMDRSSVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR*
Ga0137407_1118385523300012930Vadose Zone SoilMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSAEIETVKVRLADERGQVQARIKQLTDELNSEKQSREALEQVVQQAQSGKRR*
Ga0153915_1008633143300012931Freshwater WetlandsMDRSSVIGSLVALLIGLAAGAAALSWWEGGRQSAEIETLKVRLADERGAVQAKVKQLTDELDAEKQRREALEQVVEQQKSGKRR*
Ga0153915_1269834613300012931Freshwater WetlandsMLGAVVALVIGLAVGGAALSWWEGGRQSAEIESLKVRLADERGAVEAKVKQLTDELNAEKQRREALEQVVEQQKSGKRR*
Ga0164300_1028532323300012951SoilMDRASLIGSLLALLIGLVVGAAALSWWEGGRQSADIETLKVRLADERGVVQANVKQLTDELNAEKQRRQALEQVVEQQKSRRR*
Ga0164298_1002744523300012955SoilMDRASLIGSLLALLIGLAAGAAALSWREGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSRRR*
Ga0164301_1104709023300012960SoilLLIGLVVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSRRR*
Ga0157371_1004131323300013102Corn RhizosphereMDRASLIGSLLALLIGLAVGAAALSWCECGSQTADIETLKVRLADERGVVQAKVKQLTDELNAERQRREALEQVVEQQKSRRR*
Ga0180075_102867213300015252SoilMGRSSVLGSLLALLVGLAIGAAALSWWEGGRQSTEIEALKVRLADERGQVQAKIKQLTDELNSEKQRREALEQVVQQAQSGKRR*
Ga0132258_1035192623300015371Arabidopsis RhizosphereMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGVVQAKVKQITDELAAEKQRREALEQVMEQQKSKRR*
Ga0132258_1135578323300015371Arabidopsis RhizosphereMDRASLIGSLLALLIGLVVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAERQRREALEQVVEQQKSRRR*
Ga0132255_10486992313300015374Arabidopsis RhizosphereMGRSGLAVSLLALLVGVIVGAAALSWWEGGRQSADIETLKVRLADERGQGEAKIKQLTDELNVEKQRGEALERVQGSGRR*
Ga0187824_1001531023300017927Freshwater SedimentMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAQIETLKVRLADERGAVQSKVKELTDELNAEKQRREALEQVVEQQKSKRR
Ga0187821_1005066043300017936Freshwater SedimentMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGAVQSKVKELTDELNAEKQRREALEQVVEQQKSKRR
Ga0187775_1009488723300017939Tropical PeatlandMSRSSVLVSLLALLVGIVLGAAALSWWEGGRQSAEIENLKIKLADERGQVQAKVKQLTDELASETQRREALEQVVNSKRR
Ga0187778_1011468823300017961Tropical PeatlandMERSNVLVSLLALLVGLLLGAAALSWWEGGRQSADIEALKVRLADERGQVQAKIKQASDELASEKQRREALEQVQSGTKRR
Ga0187767_1020905613300017999Tropical PeatlandMERSNVLVSLLALLVGLVLGAAALSWWEGGRQSADIEALKVRLADERGQVQAKIKQASDELATEKQRREALEQVQSSSKRR
Ga0184634_1051448113300018031Groundwater SedimentMNRASVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVQKTKSR
Ga0184621_1030665713300018054Groundwater SedimentMGRSSVLGSLLALIVGLAIGAAALTWWEGGRQSVEIEALKVRQADERGQVQTKIKQFTDEINSEKQRREALEQVVQQAQSGKR
Ga0187765_1070768413300018060Tropical PeatlandMERSSVLVSLLALLVGLVLGAAALSWWEGGRQSADIEALKVRLADERGQVQSKIKQASDELASEKQRREALEQVQSGSKRR
Ga0184637_1018835923300018063Groundwater SedimentMDRASVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVPKTKSR
Ga0190265_1109841323300018422SoilMDRSSVLGSLVALLIGLAIGAAALSWWEGGRQSAEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK
Ga0190270_1170371123300018469SoilMGRSSVLGSLLALIVGLAIGAAALTWWEGGRQSVDIEALKVRQADERGQVQTKIKQFTDEINSEKQRREALEQVVQQAQSGKRR
Ga0190264_1228936423300019377SoilMGRSSVLGSLLALLVGLAIGAAALTWWEGGRQNMEIEALKVRQADERGQVQARIKQLTDEINSEKQRREAL
Ga0187892_1000466463300019458Bio-OozeMDRASVLGSLVALLIGLALGAAALSWWEGGRQSAEIESLKVRLADERGPVQAKVKQLTDELNSEKQRREALEQVQSTKHR
Ga0193723_108260223300019879SoilMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSAEIETLKVRLADERGQVQAKIKQLTDELDSEKQRREALEQVVQQAQSGKRR
Ga0193747_103366123300019885SoilMDRSSVLGSVVALLIGLAIGAAALSWWEGGRQSTEIESLKVRLADERGVVQSKVKQLTDELSAEKQRREALEQVVEQQKSGKRR
Ga0193711_101619913300019997SoilMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSGEIETLKVRLADERGQVQAKIKQLTDELNSEKQRRDALEQVVQQAQSG
Ga0193717_113216023300020060SoilMNRSSVLGSVLALLIGLAIGAAALSWWEGGRQSAEIETLKVRLADERGQVQAKIKQLTDELNSEKQRREALEQVTQQAQSGKRR
Ga0210407_1025243423300020579SoilMNRSSVLVSLLALLVGVVLGAAALSWWEGGRQSADIEALKVRLADERGQLQSKVKQVGDELSSEKQRREALEQVQGTKRR
Ga0210403_1054527123300020580SoilMNRSSVLVSLLALLVGVMLGAAALSWWEGGRQSADIEALKVRLADERGQVQSKIKELGDELSSEKQRREALEQVQGTKRR
Ga0179596_1011827723300021086Vadose Zone SoilMDRSSVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGVVQSKVKQLTDELNAEKQRREALEQVQQQSGKRR
Ga0179596_1065448013300021086Vadose Zone SoilMDRSSVLGSLVALLIGLILGAAALSWWEGGRQSAEIENLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR
Ga0242654_1017296913300022726SoilMDRSSLIGSLVALLIGLIVGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKR
Ga0247799_100750723300023072SoilMGRSGVVVSLLALLVGVILGAAALSWWEGGRQSADIEALKVRLADERGQVEAKIKQLTDELNVEKQRREALEQVQGAGRR
Ga0209109_1042040613300025160SoilMDRASVLGSLVALLIGLAVGAAALSWWEGGRQSADVETLKVGQADERAQVQGKIKQLTDELVAEKQRREALEQVVQQAQSGKRR
Ga0207653_1003730113300025885Corn, Switchgrass And Miscanthus RhizosphereMDRSSVIGSLVALLIGLALGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR
Ga0207645_1003935023300025907Miscanthus RhizosphereMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK
Ga0207684_1000040043300025910Corn, Switchgrass And Miscanthus RhizosphereMNRATVLGSLVALLLGLAVGAAALSWWEGGRQSAEIENLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVQNTKRR
Ga0207684_1036673223300025910Corn, Switchgrass And Miscanthus RhizosphereMDRSSVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGIVQSKVKQLTDELNAEKQRREALEQVQQQSGKRR
Ga0207660_1083369413300025917Corn RhizosphereMDRSSVFGSLLALLIGLAIGAAVLSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSK
Ga0207646_1035138623300025922Corn, Switchgrass And Miscanthus RhizosphereMDRSSVIGSLVALLIGLVLGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR
Ga0207640_1000452393300025981Corn RhizosphereMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQ
Ga0207640_1030076913300025981Corn RhizosphereMDRSSVFGSLLALLIGLAIGAAVLSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQ
Ga0208285_100558123300026005Rice Paddy SoilMLGAVLAVLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGAVQAKVKQLTDELSAEKQRREALEQIVEQEKQKSGKRR
Ga0207677_1007355023300026023Miscanthus RhizosphereMDRASLIGSLLALLIGLAVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQK
Ga0207675_10120123723300026118Switchgrass RhizosphereMGRSSVVGSLVALLVGLVIGAAALSWWEGGRQSAEIEALKVRQADERGQVQAKVKQLTDELSSEKQRR
Ga0209438_100039753300026285Grasslands SoilMDRSSVLGSLVALLIGLVLGAAALSWWEGGRQSAEIENLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR
Ga0209438_100300763300026285Grasslands SoilMDRSSVFGSLLALLIGLAIGAAALSWWEGGRQSAEIETVKVRLADERGQVQARIKQLTDELNSEKQRREALEQVVQQAQSKRK
Ga0257162_100002253300026340SoilMDRSSVLGSLVALLIGLVLGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR
Ga0257162_104014913300026340SoilIGLALGAAALSWWEGGRQSTEIESLKVRLADERGVVQAKVKQLSDELSAEKQRREALEQVVEQQKSGKRR
Ga0257149_100664223300026355SoilMDRSSVLGSLVALLIGLILGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR
Ga0257163_104834423300026359SoilMDRSSVLGSLVALLVGLALGAAALSWWEGGRQSTEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVVEQQKSGKRR
Ga0257155_101648433300026481SoilMDRSSVLGSLVALLIGLALGAAALSWWEGGRQSTEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVVEQQKSGKRR
Ga0257172_111062323300026482SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGVVQSKVKQLTDELNAEKQRREALEQV
Ga0257158_101258123300026515SoilMDRSSVLGSLVALLVGLALGAAALSWWEGGRQSTEIESLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQ
Ga0256867_1002447323300026535SoilMDRSNVLGSLLALLIGLAIGAAALSWWEGGRQRVEIEALKVRQADERGQVEAKIKQLTDELNGEKQRREALEQVVKEAQSGKR
Ga0209886_104689813300027273Groundwater SandGRERRRGGPRDGEALREETAMDRASVLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGQVQVKVKQLTDELNSEKQRREALEQVQSTKRR
Ga0209861_106682623300027332Groundwater SandMDRASVLGSLVALLIGLALGAAALSWWEGGRQSAEIESLKVRLADERGQGQAKVKQLTDELNSEKQRREALEQVQSTKRR
Ga0209968_103440113300027526Arabidopsis Thaliana RhizosphereRPPPPRWRSADPARGMGRSGVVVSLLALLVGVILGAAALSWWEGGRQSADIEALKVRLADERGQVEAKIKQLTDELNVEKQRREALEQVQGAGRR
Ga0209178_119982723300027725Agricultural SoilMDRSSLIGSVVALLIGLIVGAAALSWWEGGRQSAEIEGLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR
Ga0209073_1016604813300027765Agricultural SoilMDRSSVIGSIVALVVGLIIGAAALSWWEGGRQSADIEALKVRLADERGQVQTKVKQLTDELASEKQRREALEQIQE
Ga0209074_1025725123300027787Agricultural SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGAVQSKVKELTDELNAEKQRREALEQ
Ga0209701_1003648213300027862Vadose Zone SoilMDRSSVLGSLVALLIGLVLGAAALSWWEGGRQSAEIENLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVQQQSGKR
Ga0209701_1017349323300027862Vadose Zone SoilMNRASVLGSLVALLIGLAAGAAALSWWEGGRQSAEIESLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVQSTKRR
Ga0209283_1066127823300027875Vadose Zone SoilMNRASVLGSLVALLIGLAAGAAALSWWEGGRQSAEIESLKVRLADERGQVQAKVKQLTDELSSEKQRREALEQVQSTKRR
Ga0209382_1081264323300027909Populus RhizosphereMDRASLIGSLLALLIGLVVGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSRRR
Ga0209069_1032450523300027915WatershedsMGRSSVLGSLVALVIGLAIGAAALSWWEGGRQNADIENLKVRLADERGQVQAKIKQLTDELNSEKQRREALEQVQKPKSR
Ga0209889_110508623300027952Groundwater SandLGSLVALLIGLAVGAAALSWWEGGRQSAEIESLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVQSTKRR
Ga0209859_106566413300027954Groundwater SandMDRASVLGSLVALLIGLALGAAALSWWEGGRQSAEIESLKVRLADERGQVQVKVKQLTDELNSEKQRREALEQVQSTKRR
Ga0209526_1008974823300028047Forest SoilMDRSSVLGSLVALLIGLALGAAALSWWEGGRQSTEIESLKVRLADERGVVQAKVKQLSDELSAEKQRREALEQVVEQQKSGKRR
Ga0247828_1067711813300028587SoilMDRSSVFGSLLALLIGLAIGAAVLSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELSSEKQRREALEQVVQQAQSKRK
Ga0307504_1028319623300028792SoilMDRSSVLGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGAVQAKVKQLTDELSAEKQRREALEQVQQQSGKRR
Ga0299907_1034703023300030006SoilMDRSSVLGSLLALLIGLAIGAAALSWWEGGRQRVEIEALKVRQADERGQVEAKIKQLTDELNGEKQRREALEQVVKEAQSGKRR
Ga0268386_1009612443300030619SoilMDRSNVLGSLLALLIGLAIGAAALSWWEGGRQRVEIEALKVRQADERGQVEAKIKQLTDELNGEKQRREALEQVVKEAQSGKRR
Ga0302046_1072412123300030620SoilMDRSSVLGSLLALLIGLAIGAAALSWWEGGRQRVEIEALKVRQADERGQVEAKIKQLTDEVNGEKQRREALEQVVKEAQSGKRR
Ga0308187_1015072023300031114SoilMGRSSVLGSLVALVVGLAIGAAALTWWEGGRQSAEIEAVKVRQADERGQVQAKVKQLTDELSSEKQRR
(restricted) Ga0255311_107874723300031150Sandy SoilMGRSSVLGSLVALVIGLAIGAAALSWWEGGRQSTEIETLKVRLADERGQVQAKIKQLTDELNSEKQRREALEQVVQQAQSKRK
(restricted) Ga0255310_1002909613300031197Sandy SoilMGRSSVLGSLLALLIGLAIGAAALSWWEGGRQSADIETLKVRLADERGQVQAKIKQLTDELNSEKQRREALEQVVQQAQSKRK
Ga0299913_1032766723300031229SoilMDRSSVLGSLLALLIGLAIGAAALSWWEGGRQRAEIEALKVRQADERGQVEAKIKQLTDELTGEKQRREALEQVVKEAQSGKRR
Ga0310887_1106922613300031547SoilMDRSSVIGSLVALLIGLAAGAAALSWWEGGRQSAEIETLKVRLADERGAVQTKVKQLTDELGAEKQRREALEQIVEQEKSKRR
Ga0307469_1097332023300031720Hardwood Forest SoilSLIGSLVALLIGLIVGAAALSWWEGGRQSAEIESLKVRLADERGVVQAKVKQLTDELAAEKQRREALEQVQQQSGKRR
Ga0307468_10105356713300031740Hardwood Forest SoilMSRVFGSLLALLIGLIIGAAALSWWEGGRQSTAIEALKVRQADERGQVQAKIKQLTDELNSEKQRREALE
Ga0307473_1024718723300031820Hardwood Forest SoilMNRSSVLVSLLVLLVGVVLGAAALSWWEGGRQSADIEALKVRLADERGQVQSKVKELGDELSSEKQRREALEQVQGTKRR
Ga0310892_1068023923300031858SoilMDRSSVIGSLVALLIGLAIGAAALSWWEGGRQSADIETLKVRLADERGVVQAKVKQLTDELSAEKQRREALEQVVEQQKSGKRR
Ga0214473_10003326233300031949SoilMDRASVFGSLVALLIGLAVGAAALSWWEGGRQSADIESLKVRLADERGKVQAKVKQLTDELNSEKQRREALEQVQSTKRR
Ga0214473_1055395913300031949SoilLVALLIGLAVGAAALSWWEGGRQSADIESLKVRLADERGQVQAKVKQLTDELNSERQRREALEQVQGTKRR
Ga0307471_10239171723300032180Hardwood Forest SoilMGRSSVLGSLLALLVGLAIGAAALSWWEGGRQSREIEALKVRQADERGQVQAKIKQLNDELSSEKQRREAL
Ga0335085_10001202413300032770SoilMGRSSVLVSLLALLVGVVLGAAALSWWEGGRQSAEIESLKVRLADERGQVQAKVKQLTDELNSEKQRREALEQVVNTKRR
Ga0310810_1096017323300033412SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGVVQAKVKQLTDEINAEKQRREALEQVVEQQKSRRR
Ga0326729_101907913300033432Peat SoilMDRSSVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSKRR
Ga0326726_1001994253300033433Peat SoilMDRASVIGSLVALLIGLAVGAAALSWWEGGRQSAEIETLKVRLADERGVVQAKVKQLTDELNAEKQRREALEQVVEQQKSKRR
Ga0326726_1028129933300033433Peat SoilMDRSSVLGSLVALLIGLALGAAALSWWEGGRQSAEIETLKVRLADERGAVQAKVKELTDELNAEKQRREALQQVVEQQKSGKRR
Ga0316620_1207403223300033480SoilMDRSSVLGSLVALLIGLALGAAALSWWEGGRQSAEIETLKVRLADERGAVQAKVKELTDELNAEKQRREALEQVVEQQKSGKRR
Ga0316624_1199791123300033486SoilMLGAVLALVIGLAVGGAALSWWEGGRQSAEIESLKVRLADERGAVQAKVKQLTDELSAEKQRREALEQVVEQQKSGKRR
Ga0370498_065753_474_7283300034155Untreated Peat SoilMNRSSVFGSLLALLIGLAIGAAALSWWEGGRQSTEIEALEVRLADERGQVQAKIKQLTDELNSEKQRREALEQVVQQAQSGKRK
Ga0370495_0238984_1_2133300034257Untreated Peat SoilMNRSSVFGSLLALLIGLAIGAAALSWWEGGRQSTEIEALEVRLADERGQVQAKIKQLTDELNSEKQRREAL


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