Metagenome / Metatranscriptome Family F036448

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F036448
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	72 residues
Representative Sequence	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Number of Associated Samples	117
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	38.10 %
% of genes near scaffold ends (potentially truncated)	25.29 %
% of genes from short scaffolds (< 2000 bps)	87.65 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (68.824 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.588 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.05% β-sheet: 31.18% Coil/Unstructured: 53.76%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF01274	Malate_synthase	55.88
PF01322	Cytochrom_C_2	1.18
PF10686	YAcAr	1.18
PF01548	DEDD_Tnp_IS110	0.59
PF06718	DUF1203	0.59
PF09926	DUF2158	0.59
PF11994	DUF3489	0.59
PF13560	HTH_31	0.59
PF01722	BolA	0.59
PF00034	Cytochrom_C	0.59
PF00266	Aminotran_5	0.59
PF07366	SnoaL	0.59
PF07681	DoxX	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG2225	Malate synthase	Energy production and conversion [C]	55.88
COG3909	Cytochrome c556	Energy production and conversion [C]	1.18
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.59
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.59
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
All Organisms	root	All Organisms	31.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
cellular organisms	root	All Organisms → cellular organisms	31.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.00 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.35 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.18 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.47 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.18 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.18 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.18 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.76 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.18 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.18 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.59 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.59 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.35 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.18 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.18 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.59 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas	1.18 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.18 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.59 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.59 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.59 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.59 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	0.59 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.59 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.59 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.59 %
Mycobacteroides abscessus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Spirurina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Spiruromorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Filarioidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Onchocercidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Wuchereria	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae → Wuchereria	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Arenimonas oryziterrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	1.18 %
Wuchereria bancrofti	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae → Wuchereria → Wuchereria bancrofti	0.59 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.59 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.59 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.59 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.59 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1011395	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10051095	Not Available	1074	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10171231	Not Available	516	Open in IMG/M
3300003505\|JGIcombinedJ51221_10064151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1421	Open in IMG/M
3300005167\|Ga0066672_10179858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1340	Open in IMG/M
3300005184\|Ga0066671_10644789	Not Available	687	Open in IMG/M
3300005332\|Ga0066388_101327351	Not Available	1243	Open in IMG/M
3300005332\|Ga0066388_102032215	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005332\|Ga0066388_103001295	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300005332\|Ga0066388_104175003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736	Open in IMG/M
3300005332\|Ga0066388_104901643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	680	Open in IMG/M
3300005332\|Ga0066388_106010621	Not Available	613	Open in IMG/M
3300005332\|Ga0066388_106991247	Not Available	568	Open in IMG/M
3300005363\|Ga0008090_15051601	Not Available	697	Open in IMG/M
3300005436\|Ga0070713_101528001	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300005445\|Ga0070708_101136094	Not Available	731	Open in IMG/M
3300005561\|Ga0066699_10792248	Not Available	668	Open in IMG/M
3300005764\|Ga0066903_100055324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4889	Open in IMG/M
3300005764\|Ga0066903_100207003	Not Available	2947	Open in IMG/M
3300005764\|Ga0066903_100848984	Not Available	1643	Open in IMG/M
3300005764\|Ga0066903_101989779	Not Available	1116	Open in IMG/M
3300005764\|Ga0066903_102003026	Not Available	1112	Open in IMG/M
3300005764\|Ga0066903_102179042	Not Available	1068	Open in IMG/M
3300005764\|Ga0066903_103790650	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300005764\|Ga0066903_107115940	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300005764\|Ga0066903_108391098	Not Available	527	Open in IMG/M
3300006028\|Ga0070717_11611975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300006032\|Ga0066696_10148962	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300006041\|Ga0075023_100395721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	596	Open in IMG/M
3300006047\|Ga0075024_100764468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300006052\|Ga0075029_100821349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	634	Open in IMG/M
3300006057\|Ga0075026_100251713	Not Available	948	Open in IMG/M
3300006057\|Ga0075026_100515524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	690	Open in IMG/M
3300006057\|Ga0075026_100520071	Not Available	688	Open in IMG/M
3300006059\|Ga0075017_100371950	Not Available	1067	Open in IMG/M
3300006059\|Ga0075017_101508111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	530	Open in IMG/M
3300006086\|Ga0075019_10018781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3863	Open in IMG/M
3300006102\|Ga0075015_100028349	Not Available	2534	Open in IMG/M
3300006102\|Ga0075015_101000065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Arenimonas → Arenimonas oryziterrae	512	Open in IMG/M
3300006162\|Ga0075030_100195036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1632	Open in IMG/M
3300006163\|Ga0070715_10555023	Not Available	666	Open in IMG/M
3300006174\|Ga0075014_100076361	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300006174\|Ga0075014_100967673	Not Available	514	Open in IMG/M
3300006175\|Ga0070712_100105632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2092	Open in IMG/M
3300006755\|Ga0079222_10109985	Not Available	1473	Open in IMG/M
3300006755\|Ga0079222_11967061	Not Available	573	Open in IMG/M
3300006800\|Ga0066660_10255384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	1373	Open in IMG/M
3300006800\|Ga0066660_10327642	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300006893\|Ga0073928_10018091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7423	Open in IMG/M
3300010048\|Ga0126373_10025619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5038	Open in IMG/M
3300010048\|Ga0126373_11546331	Not Available	728	Open in IMG/M
3300010048\|Ga0126373_12372460	Not Available	590	Open in IMG/M
3300010048\|Ga0126373_12535969	Not Available	571	Open in IMG/M
3300010358\|Ga0126370_10653915	Not Available	916	Open in IMG/M
3300010359\|Ga0126376_12398009	Not Available	574	Open in IMG/M
3300010361\|Ga0126378_11279203	Not Available	829	Open in IMG/M
3300010361\|Ga0126378_12260018	Not Available	621	Open in IMG/M
3300010366\|Ga0126379_11457186	Not Available	790	Open in IMG/M
3300010366\|Ga0126379_11546156	Not Available	769	Open in IMG/M
3300010376\|Ga0126381_101752828	Not Available	897	Open in IMG/M
3300010376\|Ga0126381_101810654	Not Available	881	Open in IMG/M
3300010376\|Ga0126381_101869486	Not Available	866	Open in IMG/M
3300010376\|Ga0126381_102409207	Not Available	755	Open in IMG/M
3300010376\|Ga0126381_103628870	Not Available	605	Open in IMG/M
3300010396\|Ga0134126_11354433	Not Available	787	Open in IMG/M
3300012198\|Ga0137364_10401829	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae → Wuchereria → Wuchereria bancrofti	1025	Open in IMG/M
3300012210\|Ga0137378_10024717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5294	Open in IMG/M
3300012210\|Ga0137378_11548273	Not Available	573	Open in IMG/M
3300012285\|Ga0137370_10627852	Not Available	665	Open in IMG/M
3300012356\|Ga0137371_11375140	Not Available	519	Open in IMG/M
3300012357\|Ga0137384_10517439	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	979	Open in IMG/M
3300012971\|Ga0126369_10183528	Not Available	2002	Open in IMG/M
3300012971\|Ga0126369_10747393	Not Available	1058	Open in IMG/M
3300015371\|Ga0132258_10157241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5460	Open in IMG/M
3300016270\|Ga0182036_10669518	Not Available	837	Open in IMG/M
3300016294\|Ga0182041_11283007	Not Available	670	Open in IMG/M
3300016319\|Ga0182033_10771727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300016341\|Ga0182035_10499855	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300016341\|Ga0182035_10921347	Not Available	772	Open in IMG/M
3300016341\|Ga0182035_11158158	Not Available	689	Open in IMG/M
3300016341\|Ga0182035_12150741	Not Available	506	Open in IMG/M
3300016357\|Ga0182032_11112114	Not Available	678	Open in IMG/M
3300016371\|Ga0182034_10678699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300016387\|Ga0182040_10035810	All Organisms → cellular organisms → Bacteria → Proteobacteria	2959	Open in IMG/M
3300016445\|Ga0182038_11824017	Not Available	549	Open in IMG/M
3300017932\|Ga0187814_10085248	Not Available	1161	Open in IMG/M
3300017937\|Ga0187809_10078151	Not Available	1090	Open in IMG/M
3300017942\|Ga0187808_10250387	Not Available	793	Open in IMG/M
3300017943\|Ga0187819_10176882	Not Available	1265	Open in IMG/M
3300017955\|Ga0187817_10357853	Not Available	931	Open in IMG/M
3300017959\|Ga0187779_10531764	Not Available	781	Open in IMG/M
3300017959\|Ga0187779_10574079	Not Available	753	Open in IMG/M
3300017973\|Ga0187780_11032068	Not Available	600	Open in IMG/M
3300018007\|Ga0187805_10203197	Not Available	905	Open in IMG/M
3300018029\|Ga0187787_10365232	Not Available	560	Open in IMG/M
3300018482\|Ga0066669_12372158	Not Available	508	Open in IMG/M
3300019888\|Ga0193751_1002297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11657	Open in IMG/M
3300020580\|Ga0210403_10664527	Not Available	837	Open in IMG/M
3300020581\|Ga0210399_10258254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1453	Open in IMG/M
3300021088\|Ga0210404_10299812	Not Available	884	Open in IMG/M
3300021432\|Ga0210384_10386148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1261	Open in IMG/M
3300021559\|Ga0210409_10573153	Not Available	996	Open in IMG/M
3300021560\|Ga0126371_10077550	All Organisms → cellular organisms → Bacteria	3252	Open in IMG/M
3300021560\|Ga0126371_10139253	Not Available	2476	Open in IMG/M
3300021560\|Ga0126371_10444129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1442	Open in IMG/M
3300021560\|Ga0126371_10485736	Not Available	1383	Open in IMG/M
3300025915\|Ga0207693_10792238	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300026317\|Ga0209154_1258102	Not Available	596	Open in IMG/M
3300026552\|Ga0209577_10401492	Not Available	986	Open in IMG/M
3300027070\|Ga0208365_1006849	Not Available	1381	Open in IMG/M
3300027090\|Ga0208604_1002638	Not Available	1671	Open in IMG/M
3300027605\|Ga0209329_1061170	Not Available	809	Open in IMG/M
3300027703\|Ga0207862_1080831	Not Available	978	Open in IMG/M
3300027898\|Ga0209067_10149749	Not Available	1238	Open in IMG/M
3300027910\|Ga0209583_10230948	Not Available	806	Open in IMG/M
3300030967\|Ga0075399_11351448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300031128\|Ga0170823_13163639	Not Available	638	Open in IMG/M
3300031231\|Ga0170824_110584786	Not Available	858	Open in IMG/M
3300031231\|Ga0170824_114060293	Not Available	932	Open in IMG/M
3300031446\|Ga0170820_17529570	Not Available	581	Open in IMG/M
3300031474\|Ga0170818_114343302	All Organisms → cellular organisms → Bacteria → Proteobacteria	2381	Open in IMG/M
3300031474\|Ga0170818_114418895	Not Available	542	Open in IMG/M
3300031543\|Ga0318516_10242370	Not Available	1043	Open in IMG/M
3300031545\|Ga0318541_10287722	Not Available	915	Open in IMG/M
3300031545\|Ga0318541_10625497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300031545\|Ga0318541_10862864	Not Available	505	Open in IMG/M
3300031546\|Ga0318538_10483367	Not Available	671	Open in IMG/M
3300031564\|Ga0318573_10461263	Not Available	684	Open in IMG/M
3300031679\|Ga0318561_10523770	Not Available	653	Open in IMG/M
3300031680\|Ga0318574_10924357	Not Available	511	Open in IMG/M
3300031681\|Ga0318572_10514091	Not Available	714	Open in IMG/M
3300031682\|Ga0318560_10821899	Not Available	502	Open in IMG/M
3300031719\|Ga0306917_10248841	Not Available	1361	Open in IMG/M
3300031748\|Ga0318492_10464278	Not Available	670	Open in IMG/M
3300031754\|Ga0307475_10224991	Not Available	1502	Open in IMG/M
3300031768\|Ga0318509_10195162	Not Available	1125	Open in IMG/M
3300031770\|Ga0318521_10617387	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300031777\|Ga0318543_10389989	Not Available	624	Open in IMG/M
3300031796\|Ga0318576_10077163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	1491	Open in IMG/M
3300031797\|Ga0318550_10312158	Not Available	763	Open in IMG/M
3300031805\|Ga0318497_10592524	Not Available	622	Open in IMG/M
3300031879\|Ga0306919_10204705	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300031879\|Ga0306919_10918853	Not Available	671	Open in IMG/M
3300031890\|Ga0306925_10147806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	2528	Open in IMG/M
3300031890\|Ga0306925_10210931	Not Available	2095	Open in IMG/M
3300031890\|Ga0306925_10649553	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300031897\|Ga0318520_10322395	Not Available	934	Open in IMG/M
3300031897\|Ga0318520_10900295	Not Available	557	Open in IMG/M
3300031910\|Ga0306923_11118688	Not Available	847	Open in IMG/M
3300031910\|Ga0306923_11513537	Not Available	701	Open in IMG/M
3300031942\|Ga0310916_10555798	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031946\|Ga0310910_10742475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	775	Open in IMG/M
3300031947\|Ga0310909_11035038	Not Available	669	Open in IMG/M
3300031954\|Ga0306926_10633964	Not Available	1302	Open in IMG/M
3300032001\|Ga0306922_10624987	Not Available	1139	Open in IMG/M
3300032035\|Ga0310911_10039032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2422	Open in IMG/M
3300032042\|Ga0318545_10318274	Not Available	560	Open in IMG/M
3300032051\|Ga0318532_10258295	Not Available	619	Open in IMG/M
3300032059\|Ga0318533_10564154	Not Available	835	Open in IMG/M
3300032064\|Ga0318510_10184281	Not Available	838	Open in IMG/M
3300032076\|Ga0306924_10411614	Not Available	1547	Open in IMG/M
3300032076\|Ga0306924_11036775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300032180\|Ga0307471_101716973	Not Available	781	Open in IMG/M
3300032261\|Ga0306920_100333692	Not Available	2257	Open in IMG/M
3300032261\|Ga0306920_100990902	Not Available	1224	Open in IMG/M
3300032261\|Ga0306920_101240406	Not Available	1075	Open in IMG/M
3300033289\|Ga0310914_11873732	Not Available	504	Open in IMG/M
3300033290\|Ga0318519_10948533	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.41%
Host-Associated	Host-Associated	0.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.88%
Aquatic	Environmental → Aquatic	13.53%
Plants	Host-Associated → Plants	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.88%
Sediment	Environmental → Aquatic → Sediment	9.41%
Freshwater	Environmental → Aquatic → Freshwater	3.53%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.65%
Loam	Environmental → Terrestrial → Soil → Loam	15.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.18%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.59%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.18%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.59%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.59%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10113952	3300000580	Forest Soil	MKRTLLERLRIRERRAMANLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA*
AF_2010_repII_A1DRAFT_100510952	3300000597	Forest Soil	MKRTLLERLRIRERRAMAKLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA*
AF_2010_repII_A1DRAFT_101712311	3300000597	Forest Soil	MTNHRLTVWRRVTVEISGHSVSGSYVVEDGIVKVKTQYGEKATRIGSFNSEWVA
JGIcombinedJ51221_100641512	3300003505	Forest Soil	MKRTLLERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0066672_101798582	3300005167	Soil	MGFCLTNERMKSAMVTQTLTVWQQITVEFNGNSLSASYAVENGVVKVKTPFGEKADSSSPFNSEWIARRLLEELATEGKV*
Ga0066671_106447891	3300005184	Soil	MTNQHLTVWQHDTAEFSGRPLSGSYAIEDGMVKVKTTNGEKAAHIGSFNPGNPGGVARRLWQELAEEGKA*
Ga0066388_1013273512	3300005332	Tropical Forest Soil	MTNQRLVVWTQITAEFSGHPLSGSYAVEDGIVKVKTPYGEKATQIGPFNSEWVARRLLEELAADGNRRREDGAV*
Ga0066388_1020322152	3300005332	Tropical Forest Soil	MKRTLLERLRIRERRAMAKLTVWQQVTAEFGDHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA*
Ga0066388_1030012952	3300005332	Tropical Forest Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTPYGEKVTQIGPFNSEWVARRLLEELAAEGKRRREDGAV*
Ga0066388_1041750032	3300005332	Tropical Forest Soil	MNLERPRVCERRAMANLTVWQQITAEFSGHQLSGSYAIEDGMVKVKTLHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0066388_1049016431	3300005332	Tropical Forest Soil	MKCTLLERPRVCERRAMANLTIWQQITAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNPEWVARRLLEELAEEGTA*
Ga0066388_1060106212	3300005332	Tropical Forest Soil	MTNQGLIVWGQITAEFSGQPLRASYAIENGVVMVKTPLGEKVTQIGSFNPEWVARRLLEELAAEGKT*
Ga0066388_1069912471	3300005332	Tropical Forest Soil	MTNQRLIVWRRVTAEFSGHTLSASYAIESSMVKVKTPYAEKASQIGSFNPEWVARRLLQELAAEGKA*
Ga0008090_150516012	3300005363	Tropical Rainforest Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPYGEKATHTGSFNPQWVARRLFEELAEDGTA*
Ga0070713_1015280012	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPYGEKATQIGSFNPEWVARRLLQELAAEGKV*
Ga0070708_1011360941	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTNQHLTVWQHVTAEFSGRPLSGSYAIEDGMVKVKTTNGEKAAHIGSFNPGWVARRL
Ga0066699_107922482	3300005561	Soil	MKMGFCLTNERMKSAMVTQTLTVWQQITVEFNGNSLSASYAVENGVVKVKTPFGEKADSSSPFNSEWIARRLLEELATEGKV*
Ga0066903_1000553244	3300005764	Tropical Forest Soil	MTNQHLTVWQQITVEFNGHPLTGSYAVVDGIVKVKTPYGEKATQGGSFNSEWVARRLLEELAAEGKSRREDGSV*
Ga0066903_1002070034	3300005764	Tropical Forest Soil	MTNHRLTVWRRVTVEISGHSVGGSYVVEDGIVKVKTQYGEKATRIGSFNSEWVARRLLEELI
Ga0066903_1008489844	3300005764	Tropical Forest Soil	MANQKFTVWQQITVGFNGHSLSGSYAVENGVVKVKTPFGEKADSKSPFNSDWVARRLLATEAI*
Ga0066903_1019897792	3300005764	Tropical Forest Soil	MANLTLWQQVKAEFSGRPLSGSYAIENGMVKVKTLHGEKATQIGPFNPQWIARRLLQELAEEGRA*
Ga0066903_1020030262	3300005764	Tropical Forest Soil	MKRTLLERLRIRERYAMANLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEG
Ga0066903_1021790422	3300005764	Tropical Forest Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAAEGKRRREDGAV*
Ga0066903_1037906502	3300005764	Tropical Forest Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGSFNSEWVARRLLEELATEWKGRREDGPL*
Ga0066903_1071159402	3300005764	Tropical Forest Soil	MTNQRLTVWQQITVEISCHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAAEGTRRREDGPL*
Ga0066903_1083910982	3300005764	Tropical Forest Soil	MKRTLLERPRVCERRAMANLTVWQQITAEFSGQPLSGSYAIEDGMVKVKTPHGEKATQIGLFNSEWVARRLLQELAEEGRA*
Ga0070717_116119751	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKRTLLERPRVCERRAMANLTVWQQITAEFSGQPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0066696_101489623	3300006032	Soil	VPMANQRLTVWTQITAEFSGQPLSASYAFENGVVMVKTPHGEKVTQIGSFNPEWVARRLLQELAAEGKA*
Ga0075023_1003957212	3300006041	Watersheds	MKRTLVERPRVCERRAMANLTVWRQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0075024_1007644682	3300006047	Watersheds	MTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGPFNSEWVARR
Ga0075029_1008213491	3300006052	Watersheds	ERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0075026_1002517131	3300006057	Watersheds	MKSAMANQTLTVWQQITVEFNGDSFSASYAVENGVVKVKTPFGEKVDSSSPFNSEWTARRLLEELATEGKV*
Ga0075026_1005155242	3300006057	Watersheds	MKRTLVERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0075026_1005200712	3300006057	Watersheds	MANQTLTVWQQITVAFNGHSLTGSYAMENGIVKVKTPFGEKADPSSPFNSEWVARRLLEELAAGINSRTPP*
Ga0075017_1003719502	3300006059	Watersheds	MANQTLTVWQQITVEFNGHSLTGSYAMEKGIVKVKTPFGEKADPSSPFNSEWVARRLLEELAAEGKV*
Ga0075017_1015081111	3300006059	Watersheds	MTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGPFNSEWVARRLLEELAAEGKRIREDGAV*
Ga0075019_100187813	3300006086	Watersheds	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0075015_1000283493	3300006102	Watersheds	MRRTLVERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQVGSFNPEWVARRLLQELAEEGRA*
Ga0075015_1010000651	3300006102	Watersheds	VFGCEPMTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGPFNSEWVARRLLEELAAEGKRIREDGAV*
Ga0075030_1001950362	3300006162	Watersheds	MKRTLVERPRVCERRAMANLTVWQQITAEFSGHPLSGSYSIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0070715_105550232	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MANQTLTVWQQITVEFNGHSLTGSYAMENGIVKVKTPFGEKADPSSPFNSEWVARRLLEELAAEGKV*
Ga0075014_1000763612	3300006174	Watersheds	MTNQSLTVWRQIAVEFNGRRLSGSYAVENGIVKVKTPYGEKATQVGSFNSEWVARRLLEELAAEGKHRTEDRPL*
Ga0075014_1009676731	3300006174	Watersheds	MTNQRLVVWTQITAEFSGHPLSGSYAVVDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAAEGKRRREDGAV
Ga0070712_1001056322	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTNQRLTVWQQITAEFSGHPLSASYAIEHGMVKVKTPRSEKVAEIGSFNPEWVARRLLQELAAEGKV*
Ga0079222_101099852	3300006755	Agricultural Soil	VTNLTVWHQITAEFSGRPLSGSYAIQDGMVKVKTPRGEKATQIGAFNPDWVARRLLQELAEEGRA*
Ga0079222_119670611	3300006755	Agricultural Soil	MANLIVWQQITADFNGHQLSGSFSIEDGVVKVKTLHGEKATQIGSFNPEWTARRLLQELAEEGRA*
Ga0066660_102553844	3300006800	Soil	MKSAMVTQTLTVWQQITVEFNGNSLSASYAVENGVVKVKTPFGEKADSSSPFNSEWIARRLLEELATEGKV*
Ga0066660_103276421	3300006800	Soil	MTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGPFNSEWVARRLLEELAAEGKRIRED
Ga0073928_100180911	3300006893	Iron-Sulfur Acid Spring	MTNQHLTVWQHVTAEFSGRPLSGSYAIEDGMVKVKTTNGEKAAHIGSFNPGWVARRLLQELAEEGKA*
Ga0126373_100256196	3300010048	Tropical Forest Soil	MTNHRLTVWRRVTVEISGHSVGGSYVVEDGIVKVKTQYGEKATRIGSFNSEWVARRLLEELIAKEP*
Ga0126373_115463311	3300010048	Tropical Forest Soil	MRAPDMANLTLWQQVKAEFSGRPLSGSYAIENGMVKVKTLHGEKATQIGPFNPQWIARRLLQELAEEGRA*
Ga0126373_123724601	3300010048	Tropical Forest Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKSLYGENASQIGLFNSEWVARRLLEELAAEGKRGREDGAV*
Ga0126373_125359691	3300010048	Tropical Forest Soil	MTNQHLTVWQQITVEFNGHPLTGSYAVVDGIVKVKTPYGEKATQGGSFNSEWVARRLLEELAAEGKSRREDDSV*
Ga0126370_106539152	3300010358	Tropical Forest Soil	MKPTLLERPRVCERRAMANLTVWRQVTAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLQELAEEGRA*
Ga0126376_123980092	3300010359	Tropical Forest Soil	MANLTVWQQVTAEFGGHPLSGSYAIEDGIVKVKTLHGEKATQIGSFNAEWVARRLLQELAEEGRA*
Ga0126378_112792031	3300010361	Tropical Forest Soil	MANLTVWRQVTAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLQELAEEGRA*
Ga0126378_122600181	3300010361	Tropical Forest Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTPYGEKATQIGPFNSEWVARRLLEELAAEGKRRRGEDGAV*
Ga0126378_124253013	3300010361	Tropical Forest Soil	MANLTVWQQITAEFSGHQLSGSYAIEDGMVKVKTLHGEKATQIGSFNPEWVA
Ga0126379_114571862	3300010366	Tropical Forest Soil	MANLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNPEWVARRLLEESAEEGTA*
Ga0126379_115461561	3300010366	Tropical Forest Soil	MANQKFTVWQQITVGFNGHSLSGSYAVENGVVKVKMPFGEKADSKNPFNSDWVARRV
Ga0126381_1017528281	3300010376	Tropical Forest Soil	MKHTLLERPRVCERRAMANLTVWRQVTAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNPEWVARRLLEELAEEGTA*
Ga0126381_1018106542	3300010376	Tropical Forest Soil	MASLTVWQQVTAEFDGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLQELAEEGRA*
Ga0126381_1018694862	3300010376	Tropical Forest Soil	MPNLTVWQEVKAEFSGRPLSGSYAIEDGMVKVKTLHGEKATQIGPFNPQWVARRLLQELAQEGRA*
Ga0126381_1024092071	3300010376	Tropical Forest Soil	RQITAEFSGQPLRASYAIENGVVMVKTPHGEKVTQIGSFNPEWVARRLLEELAAEGKT*
Ga0126381_1036288702	3300010376	Tropical Forest Soil	MTNQHLIVWQQITVEFNGHPLTGSYAVVDGIVKVKTPYGEKATQGGSFNSEWVARRLLEELAAEGTRRSRRLQVRP*
Ga0134126_113544332	3300010396	Terrestrial Soil	MANLIVWQQITAEFSGHQLNGSFSIEDGVVKVKTLQGEKATQIGPFNPEWVARRLLQELAEEGRA*
Ga0137364_104018291	3300012198	Vadose Zone Soil	MTNQHLTVWQQVTAEFSGRPLSGSYAIEDGMVKVKTTNGEKAAHIGSFNPGWVARRLLQELAEEGKA*
Ga0137379_104122541	3300012209	Vadose Zone Soil	MTNQHLTVWQQVTAEFSGRPLSGSYAIEDGMVKVKTTNGEKAAHIGSFNPGW
Ga0137378_100247172	3300012210	Vadose Zone Soil	MTNQHLTVWQQVTAEFSGRPLSGSYAIEDGMVKVKTTNGEKAAHIGSFNPGWVARRLLQELAEEVKA*
Ga0137378_115482731	3300012210	Vadose Zone Soil	MKRTLLERPRVCEHRAMANLTVWQQVTAEFSGQPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA*
Ga0137370_106278521	3300012285	Vadose Zone Soil	MAMTSQRLTVWQQITVEFSGHPLSGSYAVEEGIVKVKTPYGEKTAQLGPFNAEWVARRLLEELAAEGKW*
Ga0137371_113751401	3300012356	Vadose Zone Soil	MTNQRLVVWTQITAEFSGHPLSGSYTVVDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAAEGKRRREDGAV*
Ga0137384_105174391	3300012357	Vadose Zone Soil	MANLTVWQQVTAEFSGQPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQ
Ga0126369_101835284	3300012971	Tropical Forest Soil	MTNHRLTVWRRVTVEISGHSVGGSYVVEDGIVKVKTQYGEKATRIGSFNSEWVARRLLEELITKGSIEG*
Ga0126369_107473932	3300012971	Tropical Forest Soil	VANLTVWQQVTAEFDGRPLSGSYAIEDGMVKVKTLHGEKATQIGSFNPAWVGKYAALLAA
Ga0132258_101572416	3300015371	Arabidopsis Rhizosphere	MTNLIVWQQIRAEFSGQQLSGSFSIEDGLVKVKTLHGEKAIRIGSFNPEWVARRLLQELAEEGRA*
Ga0182036_106695182	3300016270	Soil	MQRRAMANLTVWQQISAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0182041_112830072	3300016294	Soil	MKRTLLERLRIRERHAMANLTDWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEG
Ga0182033_107717272	3300016319	Soil	RTLLERPRVCERRAMANLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0182035_104998552	3300016341	Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAAEGTRRREDDPL
Ga0182035_109213471	3300016341	Soil	MTNQRLVVWTQITAEFSGHPLSGSYAVEDGFVKVKTPYGEKATQIGPFNSEWVARRLLEELAADGKRRR
Ga0182035_111581582	3300016341	Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLEELAEEGTA
Ga0182035_121507411	3300016341	Soil	MTNQRLTVWQQITVEISGHPLSGSFAVEDGIVKVKTLYGEKATQIGPFNSE
Ga0182032_111121141	3300016357	Soil	MKRTLRERPRVRERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNAEWVARRLLQELAEEGRA
Ga0182034_106786991	3300016371	Soil	MTNQRLVVSTQITAEFSGHPLSGSYAVEDGFVKVKTPYGEKATQIGPFNSEWVARRLLEELAADGKRRREDGAV
Ga0182040_100358102	3300016387	Soil	MTNQRLTVWQQITVEISGHPLSGSFAVEDGIVKVKTLYGEKATQIGPFNSEWVASGCWRS
Ga0182038_118240172	3300016445	Soil	AMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNAEWVARRLLQELAEEGRA
Ga0187814_100852482	3300017932	Freshwater Sediment	MKSLCLGGTVAMANQTLTVWQQIAVEFSGRSLSGSYAVEDGIVKVKTPHGEKMTQIGPFNSEWVARRLLEDLAAAGKV
Ga0187809_100781512	3300017937	Freshwater Sediment	MANQTLTVWQQIAVEFSGRSLSAEDGIVKVKTPHGEKMTQIGPFNSEWVARRLLE
Ga0187808_102503872	3300017942	Freshwater Sediment	MANQTLTVWQQIAVEFSGRSLSGSYAVEDGIVKVKTPHGEKMTQIGPFNSEWVARRLLADLAAAGKV
Ga0187819_101768822	3300017943	Freshwater Sediment	MKSLCLGGTVAMANQTLTVWQQIAVEFSGCSLSGSYAVEDGIVKVKTPHGEKMTQTGPFNSEWVARRLLADLAAAGKV
Ga0187817_103578532	3300017955	Freshwater Sediment	MANQTLTVWQQIAVEFSGRSLSAEDGIVKVKTPHGEKMTQIGPFNSEWVARRLLEDLAAAGKV
Ga0187779_105317642	3300017959	Tropical Peatland	MTNRRLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKAAQIGSFNPEWVARRLLEELAEEGRA
Ga0187779_105740792	3300017959	Tropical Peatland	MRNQPLTIWQQVTVEIGGSRLAGSYAVEDGIVKVKTPRGEKATQLGSFNSEWVA
Ga0187780_110320682	3300017973	Tropical Peatland	MTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTPIGSFNSEWVARRLLEELATEGERRSEDEPV
Ga0187805_102031971	3300018007	Freshwater Sediment	MANQTLTVWQQIAVEFSGRSLSGSYAVEDGIVKVKTPHGEKMTQIGPFNSEWVARRLLEDLAAAGKV
Ga0187787_103652321	3300018029	Tropical Peatland	MTNRRLTVWQQIRVEISGHPLSGSYAVEDGIVKVKTQYGEKVTPIGSFNSEWVARRLLEELATEGER
Ga0066669_123721581	3300018482	Grasslands Soil	MANQRLTVWTQITAEFSGQPLSASYAIENGVVMVKTRHGEKVTQIGSFNPEWVARRLLEELAAEGRA
Ga0193751_100229711	3300019888	Soil	MTNQHLTVWQHVTAEFSGRPLSGSYAIEDGMVKVKTTNGEKAAHIGSFNPGWVARRLLQELAEEGKA
Ga0210403_106645272	3300020580	Soil	MKRTLLERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0210399_102582542	3300020581	Soil	MTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGPFNSEWVARRLLEELAAEGERRREDGAV
Ga0210404_102998121	3300021088	Soil	MKRTLVERPRVCERRAMANLTVWRQITAEFSGHPLSGSYSIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0210384_103861482	3300021432	Soil	MKRTLLERPRVCERRAMANLTVWQQITAEFSGQPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0210409_105731532	3300021559	Soil	MKRTLLERPRLCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0126371_100775502	3300021560	Tropical Forest Soil	MTNQHLTVWQQITVEFSGHPLTGSYAVVDGIVKVKTPYGEKATQGGSFNSEWVARRLLEELAAEGKSRREDGSV
Ga0126371_101392534	3300021560	Tropical Forest Soil	MANLTVWQQVTAEFDGRPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLQELAEEGRA
Ga0126371_104441292	3300021560	Tropical Forest Soil	MKRTLLERLRIRERRAMANLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGGA
Ga0126371_104857362	3300021560	Tropical Forest Soil	MRAPDMANLTLWQQVKAEFSGRPLSGSYAIENGMVKVKTLHGEKATQIGPFNPQWIARRLLQELAEEGRA
Ga0207693_107922381	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPYGEKATQIGSFNPEWVARRLLQELAAEGKV
Ga0209154_12581022	3300026317	Soil	MGFCLTNERMKSAMVTQTLTVWQQITVEFNGNSLSASYAVENGVVKVKTPFGEKADSSSPFNSEWIARRLLEELATEGKV
Ga0209577_104014921	3300026552	Soil	MTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGPFNSEWVARRLLEELAAEGKRIREDGAV
Ga0208365_10068493	3300027070	Forest Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATEIGSFNPEWVARRLLQELAEEGRA
Ga0208604_10026382	3300027090	Forest Soil	MKRTLVERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0209329_10611702	3300027605	Forest Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGTVKVKTPHGEKATQIGSFNPEWVARRLLQELAAEGKV
Ga0207862_10808311	3300027703	Tropical Forest Soil	MKRTLLDRPRVCEHRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0209067_101497492	3300027898	Watersheds	MKRTLLERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARLPDIHDVGLMEDRAT
Ga0209583_102309482	3300027910	Watersheds	MANQTLTVWQQITVAFNGHSLTGSYAMENGIVKVKTPFGEKADPSSPFNSEWVARRLLEELAAGINSRTPP
Ga0075399_113514482	3300030967	Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPYGEKATQIGSFNSEWVARRLLEELAAEGKRIREDGAV
Ga0170823_131636391	3300031128	Forest Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPYGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0170824_1105847862	3300031231	Forest Soil	MANQTLTVWQQITVEFNGHSLTGSYAMEKGIVKVKTPFGEKADLSSPFNSEWVARRLLEELAAEGKV
Ga0170824_1140602932	3300031231	Forest Soil	MKRTLVERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQVGSFNPEWVARRLLQELAEEGRA
Ga0170820_175295702	3300031446	Forest Soil	MTNQRLTIWQQITVEISGHPLSGSYAVEDGIVKVKTLYGEKASQIGSFNSEWVARRLLEELAAEGKRRREDGAV
Ga0170818_1143433023	3300031474	Forest Soil	MANLTVWQQITAEFSCHPLSGSYAIEDGMVKVKTPYGEKATQIGSFNPEWVARRLLQELAAEGKV
Ga0170818_1144188952	3300031474	Forest Soil	MTNRRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTQYGEKVTQIGPFNSEWVARRLLEELAAEGKR
Ga0318516_102423702	3300031543	Soil	MQRRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318541_102877222	3300031545	Soil	MKRTLLERPRVWERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318541_106254971	3300031545	Soil	MKRTLLERPRVRERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGQKATQIGSFNPEWLARRLLQELAEERRAYPTAP
Ga0318541_108628641	3300031545	Soil	MKRTLLERTRVCERRAKANLTVWKKITAEFSGHPLSGSYAIEDGMVKVKSLHGEKATQIGSFNAEW
Ga0318538_104833671	3300031546	Soil	MTNQRLTVWQQITVEISGHPLSGSFAVEDGIVKVKTLYGEKATQIGPFNSEWVA
Ga0318573_104612631	3300031564	Soil	MKRTLLERPRVYERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLLEE
Ga0318561_105237701	3300031679	Soil	MKRTLLERPRVRERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318574_109243571	3300031680	Soil	MTNQRLTVWQQITVEISGHPLSGSFAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAAEGTRRREDDPL
Ga0318572_105140912	3300031681	Soil	MKRTLLERPRVWERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318560_108218991	3300031682	Soil	MKRTLLERPRVWERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLLEELAEEGRE
Ga0306917_102488411	3300031719	Soil	MKRTLLERLRIRERHAMANLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318492_104642781	3300031748	Soil	MKRTLLERPRVWERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTAHGEKTTQIGSFNPEWVAR
Ga0307475_102249912	3300031754	Hardwood Forest Soil	MKRTLLQRPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0318509_101951621	3300031768	Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0318521_106173872	3300031770	Soil	ERPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0318543_103899892	3300031777	Soil	MKRTLLERPRVGERSAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVETTHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318576_100771632	3300031796	Soil	MTNQRLTVWQQITVEISGHPLSGSFAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAADGKRRREDGAV
Ga0318550_103121581	3300031797	Soil	MKRTLLERTRVCERRAMANLTVWKKITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318497_105925242	3300031805	Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWIARRLLEELAAEGTRRREDGPLRNRNPLRGVAQ
Ga0306919_102047051	3300031879	Soil	MQRRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNAEWVARRLLQELAEEGRA
Ga0306919_109188532	3300031879	Soil	MTNQRLVVSTQITAEFSGHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWV
Ga0306925_101478064	3300031890	Soil	MKRTLLERPRVRERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGQKATQIGSFNPEWLARRLLQKLAKERRAYPTAP
Ga0306925_102109312	3300031890	Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNAEWVARRLLQELAEEGRA
Ga0306925_106495532	3300031890	Soil	MTNQRLVVSTQITAEFSGHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAADGKRRREDGAV
Ga0318520_103223951	3300031897	Soil	MQRRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0318520_109002951	3300031897	Soil	MTNQHLTVWQQITVEFSGHPLTGSYAVVDGIVKVKTPYGEKATQGGSFNSEWVARRLLEELAAEGKSRREDGPV
Ga0306923_111186881	3300031910	Soil	MANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGQKATQIGSFNPEWLARRLLQELAEERRAYPTAP
Ga0306923_115135371	3300031910	Soil	WERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0310916_105557981	3300031942	Soil	PRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0310910_107424752	3300031946	Soil	MKRTLLERLRIRERRAMANLTVWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0310909_110350382	3300031947	Soil	MKRTLLERPRVWERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLL
Ga0306926_106339641	3300031954	Soil	MTNQRLVVWTQITAEFSGHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLLEELAADGKRRREDGAV
Ga0306922_106249873	3300032001	Soil	MTNQRLVVWTQITAEFSGHPLSGSYAVEDGFVKVKTPYGEKATQIGPFNSEWVARRLLEELAADGKRRREDGAV
Ga0310911_100390321	3300032035	Soil	RPRVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNAEWVARRLLQELAEEGRA
Ga0318545_103182741	3300032042	Soil	TTVVCCWMKRTLLERPRVWERRAVANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTTHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0318532_102582952	3300032051	Soil	MKRTLLERPRVGERSAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPYGEKATQIGSFNPEWVA
Ga0318533_105641543	3300032059	Soil	TSSLGDARSRTAIPNGERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGQKATQIGSFNPEWLARRLLQELAEERRAYPTAP
Ga0318510_101842812	3300032064	Soil	MKRTLLERPRVRERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGQKATQIGSFNPEWLARRLLQELAEERRA
Ga0306924_104116142	3300032076	Soil	MQRRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARR
Ga0306924_110367753	3300032076	Soil	NLTVWQQITAEFSGHPLSGSGAIEDGMVKVKTPHGQKATQIGSFNPEWLARRLLQELAEERRAYPTAP
Ga0307471_1017169732	3300032180	Hardwood Forest Soil	MGFLFNDRIVVMANQTLTVWQQITVEFNGHSLTGSYAMENGIVKVKTPFGEKADPSSPFNSEWVARRLLEELATKGKV
Ga0306920_1003336922	3300032261	Soil	MTNQRLTVWQQITVEISGHPLSGSFAVEDGIVKVKTLYGEKATQIGPFNSEWVARRLL
Ga0306920_1009909022	3300032261	Soil	MTNQRLTVWQQITVEISGHPLSGSYAVEDGIVKVKTLYGEKATQIGPFNSEWIARRLLEELAAEGTRRREDGPL
Ga0306920_1012404062	3300032261	Soil	MKRTLLERLRIRERHAMANLTDWQQVTAEFGGHPLSGSYAIEDGMVKVKTLHGEKATQIGSFNAEWVARRLLEELAEEGRA
Ga0310914_118737321	3300033289	Soil	TGVCERRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNPEWVARRLLQELAEEGRA
Ga0318519_109485332	3300033290	Soil	CMQRRAMANLTVWQQITAEFSGHPLSGSYAIEDGMVKVKTPHGEKATQIGSFNAEWVARRLLQELAEEGRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036448

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences