Metagenome / Metatranscriptome Family F036376

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F036376
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	47 residues
Representative Sequence	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLF
Number of Associated Samples	112
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.40 %
% of genes near scaffold ends (potentially truncated)	98.24 %
% of genes from short scaffolds (< 2000 bps)	89.41 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (77.059 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.823 % of family members)
Environment Ontology (ENVO)	Unclassified (58.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.412 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.79% β-sheet: 0.00% Coil/Unstructured: 45.21%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF07687	M20_dimer	10.59
PF00582	Usp	8.82
PF01546	Peptidase_M20	7.06
PF04909	Amidohydro_2	7.06
PF13411	MerR_1	1.76
PF13561	adh_short_C2	1.18
PF08669	GCV_T_C	1.18
PF13581	HATPase_c_2	1.18
PF02702	KdpD	0.59
PF07883	Cupin_2	0.59
PF13229	Beta_helix	0.59
PF01904	DUF72	0.59
PF00144	Beta-lactamase	0.59
PF00563	EAL	0.59
PF03176	MMPL	0.59
PF02922	CBM_48	0.59
PF08281	Sigma70_r4_2	0.59
PF00294	PfkB	0.59
PF13191	AAA_16	0.59
PF04227	Indigoidine_A	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.59
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.59
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.59
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.59
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.59
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.59
COG2313	Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)	Nucleotide transport and metabolism [F]	0.59
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.59
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.59
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.59
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.59
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.06 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.06 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.06 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.47 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66.47 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.18 %
Unclassified	root	N/A	22.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.59 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	30.59 %
Unclassified	root	N/A	22.94 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.18 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.59 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.59 %
Unclassified	root	N/A	22.94 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.18 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.59 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.59 %
Unclassified	root	N/A	22.94 %
Saccharomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora	1.76 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.59 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.59 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.59 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.59 %
Unclassified	root	N/A	22.94 %
Saccharomonospora marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora marina	1.76 %
Actinomadura bangladeshensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura bangladeshensis	0.59 %
Streptacidiphilus anmyonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus anmyonensis	0.59 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.59 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.59 %
Unclassified	root	N/A	22.94 %
Saccharomonospora marina XMU15	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora marina → Saccharomonospora marina XMU15	1.76 %
Actinomadura bangladeshensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura bangladeshensis	0.59 %
Streptacidiphilus anmyonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus anmyonensis	0.59 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.59 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.59 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_110440336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1213	Open in IMG/M
3300004281\|Ga0066397_10019193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300005167\|Ga0066672_10882847	Not Available	555	Open in IMG/M
3300005186\|Ga0066676_10335090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300005332\|Ga0066388_106425178	Not Available	593	Open in IMG/M
3300005445\|Ga0070708_100030584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4655	Open in IMG/M
3300005445\|Ga0070708_100092845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2750	Open in IMG/M
3300005445\|Ga0070708_100801127	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005445\|Ga0070708_102199085	Not Available	509	Open in IMG/M
3300005445\|Ga0070708_102207256	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005467\|Ga0070706_101669412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300005468\|Ga0070707_100727296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	956	Open in IMG/M
3300005468\|Ga0070707_100800269	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005468\|Ga0070707_100939865	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005468\|Ga0070707_101476595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300005468\|Ga0070707_102057419	Not Available	538	Open in IMG/M
3300005518\|Ga0070699_100936974	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005536\|Ga0070697_102009025	Not Available	517	Open in IMG/M
3300005549\|Ga0070704_100511660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1043	Open in IMG/M
3300005713\|Ga0066905_101104783	Not Available	704	Open in IMG/M
3300005764\|Ga0066903_100256838	Not Available	2705	Open in IMG/M
3300006028\|Ga0070717_10580102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1017	Open in IMG/M
3300006173\|Ga0070716_101335968	Not Available	581	Open in IMG/M
3300006845\|Ga0075421_100201115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2466	Open in IMG/M
3300006904\|Ga0075424_100973769	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300009090\|Ga0099827_10373405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1216	Open in IMG/M
3300009792\|Ga0126374_10953901	Not Available	669	Open in IMG/M
3300010043\|Ga0126380_10458406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300010335\|Ga0134063_10525028	Not Available	595	Open in IMG/M
3300010358\|Ga0126370_10266188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1339	Open in IMG/M
3300010360\|Ga0126372_11373101	Not Available	738	Open in IMG/M
3300010360\|Ga0126372_12635312	Not Available	554	Open in IMG/M
3300010366\|Ga0126379_13271200	Not Available	543	Open in IMG/M
3300010376\|Ga0126381_103367274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300010376\|Ga0126381_105114286	Not Available	502	Open in IMG/M
3300010398\|Ga0126383_11230548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300010398\|Ga0126383_11727222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300011107\|Ga0151490_1662203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1483	Open in IMG/M
3300012201\|Ga0137365_11164368	Not Available	553	Open in IMG/M
3300012206\|Ga0137380_10643195	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300012207\|Ga0137381_11050391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300012209\|Ga0137379_10100031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2790	Open in IMG/M
3300012209\|Ga0137379_10903290	Not Available	788	Open in IMG/M
3300012209\|Ga0137379_11048927	Not Available	720	Open in IMG/M
3300012210\|Ga0137378_10213745	Not Available	1795	Open in IMG/M
3300012210\|Ga0137378_11529856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300012211\|Ga0137377_10113912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2571	Open in IMG/M
3300012356\|Ga0137371_10543001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300012357\|Ga0137384_11453106	Not Available	534	Open in IMG/M
3300012361\|Ga0137360_11684168	Not Available	540	Open in IMG/M
3300012496\|Ga0157353_1047801	Not Available	512	Open in IMG/M
3300012948\|Ga0126375_10635716	Not Available	821	Open in IMG/M
3300012971\|Ga0126369_12259877	Not Available	631	Open in IMG/M
3300015373\|Ga0132257_103246019	Not Available	592	Open in IMG/M
3300016270\|Ga0182036_10032101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3135	Open in IMG/M
3300016270\|Ga0182036_10527461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300016270\|Ga0182036_11591669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300016294\|Ga0182041_11579318	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300016294\|Ga0182041_12337581	Not Available	500	Open in IMG/M
3300016357\|Ga0182032_10655839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300016371\|Ga0182034_11576297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300016387\|Ga0182040_10932670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300016387\|Ga0182040_11657670	Not Available	545	Open in IMG/M
3300016404\|Ga0182037_11056046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300016445\|Ga0182038_11588979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300021178\|Ga0210408_10380371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1125	Open in IMG/M
3300021559\|Ga0210409_11046206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300021560\|Ga0126371_10099040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2900	Open in IMG/M
3300021560\|Ga0126371_11565515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300021560\|Ga0126371_13052914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300025915\|Ga0207693_10868146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300025922\|Ga0207646_11361133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300025935\|Ga0207709_11837538	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300026035\|Ga0207703_12031497	Not Available	551	Open in IMG/M
3300026319\|Ga0209647_1206074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300031543\|Ga0318516_10125480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1465	Open in IMG/M
3300031543\|Ga0318516_10809303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300031545\|Ga0318541_10179303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1169	Open in IMG/M
3300031545\|Ga0318541_10860128	Not Available	506	Open in IMG/M
3300031546\|Ga0318538_10123716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1352	Open in IMG/M
3300031546\|Ga0318538_10156337	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300031549\|Ga0318571_10331546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300031549\|Ga0318571_10444690	Not Available	513	Open in IMG/M
3300031564\|Ga0318573_10420121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300031564\|Ga0318573_10705253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300031640\|Ga0318555_10301101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300031640\|Ga0318555_10357465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300031668\|Ga0318542_10161606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300031681\|Ga0318572_10929566	Not Available	516	Open in IMG/M
3300031708\|Ga0310686_119936065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300031713\|Ga0318496_10139318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1320	Open in IMG/M
3300031713\|Ga0318496_10177062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1169	Open in IMG/M
3300031719\|Ga0306917_10643004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300031724\|Ga0318500_10317309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300031724\|Ga0318500_10342671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300031744\|Ga0306918_10050489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2760	Open in IMG/M
3300031744\|Ga0306918_11159922	Not Available	597	Open in IMG/M
3300031748\|Ga0318492_10487334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300031763\|Ga0318537_10136598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300031765\|Ga0318554_10208646	Not Available	1112	Open in IMG/M
3300031768\|Ga0318509_10105533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1523	Open in IMG/M
3300031768\|Ga0318509_10592129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300031768\|Ga0318509_10607292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300031770\|Ga0318521_10595225	Not Available	668	Open in IMG/M
3300031770\|Ga0318521_10726836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300031777\|Ga0318543_10015383	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300031778\|Ga0318498_10221298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	856	Open in IMG/M
3300031779\|Ga0318566_10049545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1992	Open in IMG/M
3300031779\|Ga0318566_10083151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1558	Open in IMG/M
3300031779\|Ga0318566_10137825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora marina → Saccharomonospora marina XMU15	1207	Open in IMG/M
3300031779\|Ga0318566_10244987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	889	Open in IMG/M
3300031779\|Ga0318566_10664307	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031781\|Ga0318547_10163345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1316	Open in IMG/M
3300031781\|Ga0318547_11001575	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031794\|Ga0318503_10142145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	772	Open in IMG/M
3300031794\|Ga0318503_10310989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300031797\|Ga0318550_10149048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300031798\|Ga0318523_10308154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300031798\|Ga0318523_10588333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300031799\|Ga0318565_10170575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora marina → Saccharomonospora marina XMU15	1057	Open in IMG/M
3300031805\|Ga0318497_10648428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300031805\|Ga0318497_10690400	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031819\|Ga0318568_10863465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300031821\|Ga0318567_10216978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300031821\|Ga0318567_10293342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300031831\|Ga0318564_10058776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1682	Open in IMG/M
3300031831\|Ga0318564_10466351	Not Available	549	Open in IMG/M
3300031859\|Ga0318527_10143422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	999	Open in IMG/M
3300031860\|Ga0318495_10011556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus anmyonensis	3657	Open in IMG/M
3300031860\|Ga0318495_10254141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300031879\|Ga0306919_10729758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora marina → Saccharomonospora marina XMU15	763	Open in IMG/M
3300031879\|Ga0306919_11383209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300031880\|Ga0318544_10032895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1810	Open in IMG/M
3300031880\|Ga0318544_10093744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1127	Open in IMG/M
3300031880\|Ga0318544_10095114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300031894\|Ga0318522_10276904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300031896\|Ga0318551_10179735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1165	Open in IMG/M
3300031896\|Ga0318551_10487564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300031896\|Ga0318551_10795127	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031942\|Ga0310916_10042760	All Organisms → cellular organisms → Bacteria	3419	Open in IMG/M
3300031942\|Ga0310916_10507171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1027	Open in IMG/M
3300031945\|Ga0310913_10331346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1076	Open in IMG/M
3300031947\|Ga0310909_10751388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300031981\|Ga0318531_10216063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300032001\|Ga0306922_11343146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura bangladeshensis	721	Open in IMG/M
3300032001\|Ga0306922_11371555	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032009\|Ga0318563_10102063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1517	Open in IMG/M
3300032009\|Ga0318563_10297473	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300032035\|Ga0310911_10266673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	982	Open in IMG/M
3300032044\|Ga0318558_10438864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300032055\|Ga0318575_10226373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300032055\|Ga0318575_10398863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300032055\|Ga0318575_10490846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300032059\|Ga0318533_10530087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300032060\|Ga0318505_10205232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923	Open in IMG/M
3300032066\|Ga0318514_10323836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300032089\|Ga0318525_10013922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3700	Open in IMG/M
3300032089\|Ga0318525_10042576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2238	Open in IMG/M
3300032089\|Ga0318525_10188419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1060	Open in IMG/M
3300032090\|Ga0318518_10214391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300032090\|Ga0318518_10612440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300032094\|Ga0318540_10050131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1872	Open in IMG/M
3300032094\|Ga0318540_10323290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300032174\|Ga0307470_11365786	Not Available	583	Open in IMG/M
3300032205\|Ga0307472_101619650	Not Available	637	Open in IMG/M
3300033158\|Ga0335077_10094464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3521	Open in IMG/M
3300033290\|Ga0318519_10166550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1241	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.06%
Plants	Host-Associated → Plants	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.94%
Loam	Environmental → Terrestrial → Soil → Loam	12.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.59%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.59%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1104403361	3300000956	Soil	MADVTNDQAMISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFI
Ga0066397_100191932	3300004281	Tropical Forest Soil	MADVTNDRAMISERDMVSETVAPTLVGRVLNSFDLVVIFVALVLFITNAST
Ga0066672_108828472	3300005167	Soil	MATDMTGDRDMISDRDMISEKVAPTLVGRTLGSFDLVVIFVALVLFIPNASTVQFAGSAAFVFW
Ga0066676_103350901	3300005186	Soil	MAADMTGDQARISERDMISEKVAPTLVARVLNSFDLVVIFVAI
Ga0066388_1064251782	3300005332	Tropical Forest Soil	MTQDMTGDRAISERDMISEKVAPTLVGRMLNSFDLVVIFVALVLFIPNASTVQFA
Ga0070708_1000305841	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMPGDRAMISEQVAPTLVSRVLNSFDLVVIFVALVLF
Ga0070708_1000928451	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTGDQATVSERDMISEKVAPTLVARVLNSFDLVVIFVAIVLFI
Ga0070708_1008011271	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTNNRATISERDMISEKVAPTLVGRVLNSFDLVVIFVALVLFVSNSSTVQ
Ga0070708_1021990851	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAADMPGDRAMISEQVAPTLVSRVLNSFDLVVIFVALVLF
Ga0070708_1022072562	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGTADDRNMISEQIAPTLVSRVLNSFDLVVIFVGLVLFIPNSSTVQP
Ga0070706_1016694121	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMAGDREMISEKVAPTLVGRVLTSFDLVVIFVALVLFIPNASTVQFAGPAT
Ga0070707_1007272962	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTADTTGNREMISEKVAPTLVGRVLTSFDLVVIFVALVLFVSNSSSVQFAGPAIF
Ga0070707_1008002691	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTGDQARISERDMISEKVAPTLVARVLNSFDLVVIFVAIVLFIPNAS
Ga0070707_1009398651	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTGDQATVSERDMISEKVAPTLVARVLNSFDLVVIFVAIVLFIPNAS
Ga0070707_1014765952	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LAADLTGDREMISEKVAPTLVGRVLTSFDLVVIFVALVLFVSNSSSVQFAGPA
Ga0070707_1020574192	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTNNRATISERDMISEKVAPTLVGRVLNSFDLVVIFVALVLFVSNSST
Ga0070699_1009369742	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTGDQARISERDMISEKVAPTLVARVLNSFDLVVIFVAIVLFIP
Ga0070697_1020090252	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTGDQARISERDMISEKVAPTLVARVLNSFDLVVIFVA
Ga0070704_1005116601	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMTGDQATVSERDMISEKVAPTLVARVLNSFDLVVIFVA
Ga0066905_1011047833	3300005713	Tropical Forest Soil	MAQDMTNNRAMISERDMISEKVAPTLVGRTLGSFDLVVIFVALVLFISNAS
Ga0066903_1002568381	3300005764	Tropical Forest Soil	MADVTDDRALISERAMISEKVAPTLVSRVLNSFDLVVIFVA
Ga0070717_105801021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAADMSGDQTMIPEREMISEKVAPTLVARVLNSFDL
Ga0070716_1013359682	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAQDMTGDREMISDRDMISEKVAPTLVGRTLSSFDL
Ga0075421_1002011151	3300006845	Populus Rhizosphere	MAQDMTNDRAMMSERDMISEKVAPTLVGRMLNSFDLVVIFVALVLFIPNASTVQFAGSAAFVFW
Ga0075424_1009737692	3300006904	Populus Rhizosphere	MAADMTGDQARISERDMISEKVAPTLVARVLNSFDLVVIFVALVLFIPN
Ga0099827_103734051	3300009090	Vadose Zone Soil	MAADMTGDRTTISERDMISEKVAPTLVARVLNSFDLVVIFVALVLFIPNASTVQ
Ga0126374_109539012	3300009792	Tropical Forest Soil	MAADQTSERAAISERDMISEKVAPTLVTRVLNSFDLVVIFVAIVLFI
Ga0126380_104584062	3300010043	Tropical Forest Soil	MTADMTGNREMISEKVAPTLVGRVLTSFDLVVIFVA
Ga0134063_105250282	3300010335	Grasslands Soil	MAQDMTNDRAMLSERDMISEKVAPTLVGRTLRSFDLVVIFVALVLFIP
Ga0126370_102661881	3300010358	Tropical Forest Soil	MAQDMTNNRAMISDRDMISEKVAPTLVGRTLGSFDLVVIFVALVLF
Ga0126372_113731011	3300010360	Tropical Forest Soil	MADVTDDRALISDRAMISEKVAPTLVSRVLNSFDLVVIFVA
Ga0126372_126353121	3300010360	Tropical Forest Soil	MAADMTGERGMTPDRTMISETVAPTLVGRVLNSFDLVVIFVAIVLFVPNSSTVQFAGS
Ga0126378_109677192	3300010361	Tropical Forest Soil	MISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFIS
Ga0126378_114285612	3300010361	Tropical Forest Soil	MAAGTADDRNMISEQVAPTLVSRVLNSFDLVVIFVALVLFIPNAS
Ga0126379_132712001	3300010366	Tropical Forest Soil	MAQDMTGDRAMISDRDMISEKVAPTLVGRTLGSFDLV
Ga0126381_1033672741	3300010376	Tropical Forest Soil	MADVTDDRALISDRAMISEKVAPTLVSRVLSSFDLVVIFVA
Ga0126381_1051142861	3300010376	Tropical Forest Soil	MAADMTGDRAAISDREMISERVAPTLVTRVLNSFDLVVIFVALVLF
Ga0126383_112305481	3300010398	Tropical Forest Soil	MADVTNDRAMISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNAASVQFAGP
Ga0126383_117272221	3300010398	Tropical Forest Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLNSFDLVVIFV
Ga0151490_16622031	3300011107	Soil	MAQDMTGDREMISDRDMISEKVAPTLVGRTLGSFDLVVIFVALVLFIPNAST
Ga0137365_111643682	3300012201	Vadose Zone Soil	MTGDRAMLSERDMISEKVAPTLVGRMLNSFDLVVIFVALVLFIPNASTVQFAGS
Ga0137380_106431952	3300012206	Vadose Zone Soil	MAADMSGDRAMISEQVAPTLVSRVLNSFDLVVIFVALVLFIPNAST
Ga0137381_110503911	3300012207	Vadose Zone Soil	MAADMTGDQATISERDMISEKVAPTLVARVLNSFDLVVIFVAI
Ga0137379_101000314	3300012209	Vadose Zone Soil	MAADMTGDQATISERDMISEKVAPTLVARVLNSFDLVVIFVAIVLFIPNAS
Ga0137379_109032902	3300012209	Vadose Zone Soil	MAADMTGDQAMTTDREMISEKVAPTLVARVLNSFDLVVIFVALVLFIPNA
Ga0137379_110489272	3300012209	Vadose Zone Soil	MAADMSGDRAMISEQVAPTLVSRVLNSFDLVVIFVALVLFI
Ga0137378_102137452	3300012210	Vadose Zone Soil	MAADMPGDRAMISEQVAPTLVSRVLNSFDLVVIFVALVLFI
Ga0137378_115298561	3300012210	Vadose Zone Soil	MAADRTGDRATISERDMISEKVAPTLVARVLNSFDLV
Ga0137377_101139125	3300012211	Vadose Zone Soil	MAADMTGDRATISERDMISEKVAPTLVARVLNSFDLVVIFVALV
Ga0137371_105430011	3300012356	Vadose Zone Soil	MAADRTGDRATISERDMISEKVAPTLVARVLNSFDLVVIF
Ga0137384_114531061	3300012357	Vadose Zone Soil	MAADMTGDQAMTSERDMISEKVAPTLVARVLNSFVRVVIFVDLVLFIPNASTVQFAG
Ga0137360_116841682	3300012361	Vadose Zone Soil	MAADITGDREMISEKVAPTLVGRVLTSFDLVVIFVALVLFIPNASTVQFAG
Ga0157353_10478012	3300012496	Unplanted Soil	MAQDMTNDRAMMSERDMISEKVAPTLVGRMLNSFDLVVIFVALVLFIPNAST
Ga0126375_106357162	3300012948	Tropical Forest Soil	MAQDMTNDRAMISEQDMISEKVAPTLVGRTLGSFDLVVIFVALVLFISNAS
Ga0126369_122598771	3300012971	Tropical Forest Soil	MAQDMTGDREMMSEREMISEKVAPTLVGRTLGSFDLVVI
Ga0132257_1032460191	3300015373	Arabidopsis Rhizosphere	MAQDMTGDRAMLSEREMISEKVAPTLVGRTLSSFDLVVI
Ga0182036_100321011	3300016270	Soil	MSADMTNNRATISERDMISEKVAPTLVGRVLTSFDLVVI
Ga0182036_105274612	3300016270	Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLSSFDLVVIFVALVLFIPN
Ga0182036_115916691	3300016270	Soil	MADVTNDRALSSERDMISEKVAPTLVGRVLNSFDLVVIFVALVLFISN
Ga0182041_115793181	3300016294	Soil	VADITSEQSMAPERSLISERVAPTLVARVLNSFDLVVIFVALVRFVSNSSTVQFAG
Ga0182041_123375811	3300016294	Soil	MAADMTREPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLFIPNASTVQFAGPA
Ga0182032_106558392	3300016357	Soil	MAADITGDQGMTPERDLISEKIAPTLVGRVLNSFDLVVIFVALVLFIPNASTVQF
Ga0182034_115762971	3300016371	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFV
Ga0182040_109326702	3300016387	Soil	MAADITGERGTTPERNMISEKVAPTLVGRVLSSFDLVVIFVALVLFIPNASTVQFAG
Ga0182040_116576701	3300016387	Soil	MAADMTGDRAAISEREMISEKVAPTLVTRVLNSFDLVVIFVALVLFIPNASTVQ
Ga0182037_110560462	3300016404	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVV
Ga0182038_115889791	3300016445	Soil	MADVTNDRALSSEREMISEKVAPTLVGRVLNSFDL
Ga0187765_102032373	3300018060	Tropical Peatland	MAAEMPDDRAMISEKVAPTLVSRVLNSFDLVVIFVALVLF
Ga0210408_103803711	3300021178	Soil	MAADMTGDRATISERDMISEKVAPTLVARVLNSFDLVVIFVALVLFIPNASTVQFA
Ga0210409_110462061	3300021559	Soil	MAADMTGERGMTPDRTMISETVAPTLVGRVLNSFDLVVIFVALVLFIPNASTVQFAGPAA
Ga0126371_100990401	3300021560	Tropical Forest Soil	VAADITGDDRSMVSERIAPTLVGRVLISFDLVVIFVALVL
Ga0126371_115655152	3300021560	Tropical Forest Soil	MADVTNDRALISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVQFA
Ga0126371_130529142	3300021560	Tropical Forest Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVV
Ga0207693_108681462	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MADTTSERAATSERAMISETVAPTLVGRVLNSFDLVVIFVALVLFIPNASTVQFAGS
Ga0207646_113611331	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LAADLTGDREMISEKVAPTLVGRVLTSFDLVVIFVALVLFVSNSSSVQFAGPAIFVYWVLGFLT
Ga0207709_118375381	3300025935	Miscanthus Rhizosphere	MAQDMTNDRATMSERAMTSEKVAPTLVGRMLNSFDLVVIFVALVLFIPNASTVQFAGSAA
Ga0207703_120314971	3300026035	Switchgrass Rhizosphere	MAADMTGDQARISERDMISEKVAPTLVARVLNSFDLVVIFVAIVLF
Ga0209647_12060742	3300026319	Grasslands Soil	MAADMPGGRAMISEQVAPTLVSRVLNSFDLVVIFVALVL
Ga0318516_101254801	3300031543	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVQ
Ga0318516_108093032	3300031543	Soil	MADVTDDRAMLSERDMVSEKVAPTLVGRVLNSFDLVVIFVALVLFISNSS
Ga0318541_101793031	3300031545	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVFIFV
Ga0318541_108601282	3300031545	Soil	MADVTNDRAMISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFI
Ga0318538_101237161	3300031546	Soil	MADVTNDRALSSEREMISEKVAPTLVGRVLNSFDLVVIFVALVLF
Ga0318538_101563371	3300031546	Soil	MAADMTGDRAAISEREMISEKVAPTLVTRVLNSFDLVVIFVALVLF
Ga0318571_103315461	3300031549	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSS
Ga0318571_104446902	3300031549	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLF
Ga0318573_104201211	3300031564	Soil	MADVTNDRAMISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFIS
Ga0318573_107052532	3300031564	Soil	MADVTNNRATISERDMISEKVAPTLVGRVLTSFDLVVIFVALVLFVSNSS
Ga0318555_103011012	3300031640	Soil	MADVTNDRALSSEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVSLPA
Ga0318555_103574651	3300031640	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALV
Ga0318542_101616061	3300031668	Soil	MADVTNDRAMISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFISNSS
Ga0318572_109295661	3300031681	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTV
Ga0310686_1199360652	3300031708	Soil	MAADMTGDQVPERTMISETVAPTLVSRVLNSFDLVVIFVALVLFVSNSSTVQFAGS
Ga0318496_101393182	3300031713	Soil	MAADMTNNRATISERDMISEKVAPTLVGRVLSSFDLV
Ga0318496_101770622	3300031713	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSS
Ga0306917_106430042	3300031719	Soil	VATDMTGDQAITPERSLISEKVAPTLVSRVLNSFDLVVIFVALVLFVSNSSTVQF
Ga0318500_103173091	3300031724	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISN
Ga0318500_103426712	3300031724	Soil	VATDMTGDQAITPERSLISEKVAPTLVSRVLNSFDLVVIFVALV
Ga0306918_100504891	3300031744	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVL
Ga0306918_111599222	3300031744	Soil	MAADMTNNRATTSERDMISEKVAPTLVGRVLTSFDLVVIFVALVLFIPNASTVQFAGSAIYVFWIKQDEG
Ga0318492_104873341	3300031748	Soil	MAADITGERGTTPERNMISEKVAPTLVGRVLSSFDLVVIFVALVL
Ga0318537_101365981	3300031763	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISN
Ga0318554_102086462	3300031765	Soil	MAADITGDPGMIPERAMISERVAPTLVGRVLNSFDLVVIFVA
Ga0318509_101055332	3300031768	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFIS
Ga0318509_105921291	3300031768	Soil	MADVTDDRAMLSERDMVSEKVAPTLVGRVLNSFDLVVIFV
Ga0318509_106072922	3300031768	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVQF
Ga0318521_105952251	3300031770	Soil	MAAEMSDDRAMISEKVAPTLVSRVLTSFDLVVIFVALVLVISNSSTVQFAGSAI
Ga0318521_107268362	3300031770	Soil	MADVTNDRALSSERDMISEKVAPTLVGRVLNSFDLVVIFVALVLFIS
Ga0318543_100153831	3300031777	Soil	MAADMTGDRAAISEREMISEKVAPTLVTRVLNSFDLVVIFVALVLFIPNASTVQF
Ga0318498_102212981	3300031778	Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLSSFDLVVIFVALVLFIPNAST
Ga0318566_100495451	3300031779	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLF
Ga0318566_100831512	3300031779	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLF
Ga0318566_101378251	3300031779	Soil	MADVTNDRAMISERDMISEKVAPTLVGRVLNSFDLV
Ga0318566_102449872	3300031779	Soil	MAADITGEPGMTPERTMISEKVAPTLVGRVLSSFDLVVIFVALVLFI
Ga0318566_106643072	3300031779	Soil	MAADMTGDRAAISEREMISEKVAPTLVTRVLNSFDLVVI
Ga0318547_101633451	3300031781	Soil	MADVTNDRATISEREMISENVAPTLVGRVLNSFDLVVIFVA
Ga0318547_110015752	3300031781	Soil	MAADMTGDRAAISEREMISEKVAPTLVTRVLNSFDLVVIFVALVLFI
Ga0318503_101421451	3300031794	Soil	MAADITGDPGMIPERAMISERVAPTLVGRVLNSFDLVVIFVAIVLFVPNSSTV
Ga0318503_103109892	3300031794	Soil	MAADITGEPGMTPERTMISEKVAPTLVGRVLSSFDL
Ga0318550_101490482	3300031797	Soil	MADVTDDRAMLSERDMVSEKVAPTLVGRVLNSFDLVVIFVALVLFIS
Ga0318523_103081542	3300031798	Soil	VATDMTGDQAITPERSLISEKVAPTLVSRVLNSFDLVVIFVAL
Ga0318523_105883332	3300031798	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLFIPN
Ga0318565_101705752	3300031799	Soil	MADVTNDRAMISEREMISEKVAPTLVGRVLNSFDL
Ga0318497_106484282	3300031805	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLFIPNASTVQFAGPAA
Ga0318497_106904001	3300031805	Soil	MAADMTNNRATISERDMISEKVAPTLVGRVLSSFDLVVIFVALVLFVSNSSTVQFAGSAIYV
Ga0318568_108634652	3300031819	Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLSSFDLVVIFVALVLFIPNASTVQ
Ga0318567_102169781	3300031821	Soil	MAADMTNNRATISERDMISEKVAPTLVGRVLNSFDLVVIF
Ga0318567_102933421	3300031821	Soil	MAADMTGDRAAISEREMISEKVAPTLVTRVLNSFDLVVIFVALVLFIPNASTVQFAG
Ga0318564_100587762	3300031831	Soil	MADVTNDRALSSEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSS
Ga0318564_104663511	3300031831	Soil	MADVTNDRAMISERDMISEKVAPTLVGRVLNSFDLVV
Ga0318527_101434222	3300031859	Soil	MADVTNDRAMISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVQFA
Ga0318495_100115561	3300031860	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVL
Ga0318495_102541411	3300031860	Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLNSFDLVV
Ga0306919_107297581	3300031879	Soil	MADVTNDRAMISERDMISEKVAPTLVGRVLNSFDLVVIFVALV
Ga0306919_113832092	3300031879	Soil	MADVTNDRALSSERDMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSS
Ga0318544_100328951	3300031880	Soil	MADVTNDRALSSERDMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSTTV
Ga0318544_100937442	3300031880	Soil	VADITSEQSMAPERSLISERVAPTLVARVLNSFDLVVIF
Ga0318544_100951141	3300031880	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLFIP
Ga0318522_102769041	3300031894	Soil	MAADITGERGTTPERNMISEKVAPTLVGRVLSSFDLVVIFVALVLFIPNAST
Ga0318551_101797351	3300031896	Soil	MAADMTNNRATTSERDMISEKVAPTLVGRVLTSFDLVVIFVALVLFIPNASTVQFAGSA
Ga0318551_104875642	3300031896	Soil	MADVTNDRAMISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVQF
Ga0318551_107951271	3300031896	Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLSSFDLVVIFVALV
Ga0310916_100427605	3300031942	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVQFA
Ga0310916_105071712	3300031942	Soil	MADVTNDRALSSERDMISEKVAPTLVGRVLNSFDLVVIFVALVL
Ga0310913_103313461	3300031945	Soil	MADVTNDRALSSEREMISEKVAPTLVGRVLNSFDLV
Ga0310909_107513882	3300031947	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLFI
Ga0318531_102160631	3300031981	Soil	MADVTNDRALSSERDMISEKVAPTLVGRVLNSFDLVVIFVALV
Ga0306922_113431461	3300032001	Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLNSFDLVVIFVALVLFIPNASTVQFSGAA
Ga0306922_113715551	3300032001	Soil	MAADMTNNRATTSERDMISEKVAPTLVGRVLTSFDLVVIFVALVLFIPNASTVQFAGSAIYVFWIL
Ga0318563_101020632	3300032009	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSSTVQ
Ga0318563_102974731	3300032009	Soil	MAADMTNNRATISERDMISEKVAPTLVGRVLSSFDLVVIFVALVLFVSNSSTVQFAGSAIYVFWILGF
Ga0310911_102666732	3300032035	Soil	MADVTNDRALSSERDMISEKVAPTLVGRVLNSFDLVVIF
Ga0318558_104388641	3300032044	Soil	MADVTNDRAMISEREMVSEKVAPTLVGRVLNSFDLVVIFVAHVLFIS
Ga0318575_102263731	3300032055	Soil	MADVTNDRAMISEREMVSEKVAPTLVGRVLNSFDLVVIFVALVL
Ga0318575_103988631	3300032055	Soil	MADITGERGMTPERNMISEKVAPTLVGRVLSSFDLVVIFVALV
Ga0318575_104908462	3300032055	Soil	MAADMTNNRATISERDMISEKVAPTLVGRVLSSFDLVVIFVALV
Ga0318533_105300872	3300032059	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVI
Ga0318505_102052321	3300032060	Soil	MAADITGDPGMIPERAMISERVAPTLVGRVLNSFDLVVIFVAIV
Ga0318514_103238361	3300032066	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLFIPNA
Ga0318525_100139221	3300032089	Soil	MAADMTGEPGMTPERTMISETVAPTLVGRVLNSFDLVVIFVALVLFIPNASTVQF
Ga0318525_100425761	3300032089	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSST
Ga0318525_101884191	3300032089	Soil	MAADMTNNRATISERDMISEKVAPTLVGRVLNSFD
Ga0318518_102143912	3300032090	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVIFV
Ga0318518_106124402	3300032090	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVIFVALV
Ga0318540_100501311	3300032094	Soil	MADVTNDRATISEREMISEKVAPTLVGRVLNSFDLVVI
Ga0318540_103232901	3300032094	Soil	MAADITGERGMTPERNMISEKVAPTLVGRVLNSFDLVVI
Ga0307470_113657862	3300032174	Hardwood Forest Soil	MAADMTGDQARISERDMISEKVAPTLVARVLNSFDLVVIFVAIVLFVPNAST
Ga0307472_1016196501	3300032205	Hardwood Forest Soil	MAADMTGDPATISERDMISEKVAPTLVARVLNSFDLVVIFVALVLFIPNASTVQF
Ga0335077_100944641	3300033158	Soil	MAAEMSDDRAMISEKVAPTLVSRVLNSFDLVVIFVALVLFISNSST
Ga0318519_101665502	3300033290	Soil	MADVTNDRALISEREMISEKVAPTLVGRVLNSFDLVVIFVALVLFISNSST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036376

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences