Metagenome / Metatranscriptome Family F036347

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F036347
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	68 residues
Representative Sequence	MYHDEAMEGKMNRYFWPADHPAVLLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHFHSAGMG
Number of Associated Samples	104
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	40.48 %
% of genes near scaffold ends (potentially truncated)	29.41 %
% of genes from short scaffolds (< 2000 bps)	91.76 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (68.824 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.647 % of family members)
Environment Ontology (ENVO)	Unclassified (30.588 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.118 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF04392	ABC_sub_bind	1.76
PF00582	Usp	1.76
PF08238	Sel1	1.18
PF00561	Abhydrolase_1	0.59
PF13495	Phage_int_SAM_4	0.59
PF07732	Cu-oxidase_3	0.59
PF05494	MlaC	0.59
PF07366	SnoaL	0.59
PF01527	HTH_Tnp_1	0.59
PF07508	Recombinase	0.59
PF07883	Cupin_2	0.59
PF08241	Methyltransf_11	0.59
PF13417	GST_N_3	0.59
PF06723	MreB_Mbl	0.59
PF13763	DUF4167	0.59
PF13551	HTH_29	0.59
PF11799	IMS_C	0.59
PF05401	NodS	0.59
PF00486	Trans_reg_C	0.59
PF00042	Globin	0.59
PF00583	Acetyltransf_1	0.59
PF11752	DUF3309	0.59
PF11008	DUF2846	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.76
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.59
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.59
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.59
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.59
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
All Organisms	root	All Organisms	31.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
cellular organisms	root	All Organisms → cellular organisms	31.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.59 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.59 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.76 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.59 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.18 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.59 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.59 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.59 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.76 %
Nitrospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum	0.59 %
Dankookia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia	0.59 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.59 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.76 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.59 %
Bradyrhizobium brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	0.59 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.59 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.59 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.76 %
Nitrospirillum amazonense Y2	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense → Nitrospirillum amazonense Y2	0.59 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.59 %
Bradyrhizobium brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	0.59 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10131203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1026	Open in IMG/M
3300003223\|JGI26343J46809_1006176	Not Available	901	Open in IMG/M
3300003505\|JGIcombinedJ51221_10051884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1560	Open in IMG/M
3300004080\|Ga0062385_10212438	Not Available	1053	Open in IMG/M
3300004091\|Ga0062387_100650624	Not Available	764	Open in IMG/M
3300004092\|Ga0062389_100942501	Not Available	1047	Open in IMG/M
3300004099\|Ga0058900_1321298	Not Available	599	Open in IMG/M
3300004152\|Ga0062386_100510089	Not Available	977	Open in IMG/M
3300004152\|Ga0062386_100820633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300004152\|Ga0062386_100848535	Not Available	754	Open in IMG/M
3300004152\|Ga0062386_101025908	Not Available	684	Open in IMG/M
3300004153\|Ga0063455_100691866	Not Available	684	Open in IMG/M
3300005434\|Ga0070709_10941243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300005434\|Ga0070709_11190029	Not Available	612	Open in IMG/M
3300005435\|Ga0070714_100079853	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300005435\|Ga0070714_100123318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2307	Open in IMG/M
3300005436\|Ga0070713_100436005	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300005436\|Ga0070713_100752710	Not Available	932	Open in IMG/M
3300005436\|Ga0070713_101960068	Not Available	568	Open in IMG/M
3300005437\|Ga0070710_10555439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300005518\|Ga0070699_100819570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	852	Open in IMG/M
3300005536\|Ga0070697_101152452	Not Available	690	Open in IMG/M
3300005598\|Ga0066706_11324930	Not Available	544	Open in IMG/M
3300005602\|Ga0070762_11019297	Not Available	568	Open in IMG/M
3300005610\|Ga0070763_10008083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4220	Open in IMG/M
3300005921\|Ga0070766_10068187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2041	Open in IMG/M
3300006028\|Ga0070717_10326612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1368	Open in IMG/M
3300006175\|Ga0070712_100372707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300006176\|Ga0070765_101873454	Not Available	562	Open in IMG/M
3300009698\|Ga0116216_10785628	Not Available	571	Open in IMG/M
3300010152\|Ga0126318_10033916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300010343\|Ga0074044_10649331	Not Available	689	Open in IMG/M
3300011120\|Ga0150983_10856394	Not Available	510	Open in IMG/M
3300011120\|Ga0150983_11504679	Not Available	565	Open in IMG/M
3300011120\|Ga0150983_11641566	Not Available	1448	Open in IMG/M
3300011120\|Ga0150983_12469837	Not Available	779	Open in IMG/M
3300011120\|Ga0150983_12489461	Not Available	507	Open in IMG/M
3300011120\|Ga0150983_16392300	Not Available	667	Open in IMG/M
3300012202\|Ga0137363_11068760	Not Available	686	Open in IMG/M
3300012362\|Ga0137361_10084600	All Organisms → cellular organisms → Bacteria → Proteobacteria	2720	Open in IMG/M
3300012923\|Ga0137359_11708886	Not Available	517	Open in IMG/M
3300012958\|Ga0164299_11686283	Not Available	502	Open in IMG/M
3300012984\|Ga0164309_10604311	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012989\|Ga0164305_10754679	Not Available	802	Open in IMG/M
3300014199\|Ga0181535_10587859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	639	Open in IMG/M
3300017822\|Ga0187802_10135219	Not Available	938	Open in IMG/M
3300017823\|Ga0187818_10155319	Not Available	996	Open in IMG/M
3300017823\|Ga0187818_10487056	Not Available	553	Open in IMG/M
3300017943\|Ga0187819_10046704	Not Available	2566	Open in IMG/M
3300017943\|Ga0187819_10054615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2371	Open in IMG/M
3300017955\|Ga0187817_10534492	Not Available	748	Open in IMG/M
3300018001\|Ga0187815_10375465	Not Available	604	Open in IMG/M
3300018006\|Ga0187804_10070635	Not Available	1397	Open in IMG/M
3300018006\|Ga0187804_10369732	Not Available	632	Open in IMG/M
3300019161\|Ga0184602_117931	Not Available	530	Open in IMG/M
3300019165\|Ga0184589_105693	Not Available	544	Open in IMG/M
3300020579\|Ga0210407_10750134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300020579\|Ga0210407_11255283	Not Available	555	Open in IMG/M
3300020580\|Ga0210403_10047916	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300020580\|Ga0210403_10168554	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300020580\|Ga0210403_10169718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1787	Open in IMG/M
3300020580\|Ga0210403_10356348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1197	Open in IMG/M
3300020580\|Ga0210403_10648615	Not Available	849	Open in IMG/M
3300020580\|Ga0210403_11484905	Not Available	510	Open in IMG/M
3300020581\|Ga0210399_10279372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1394	Open in IMG/M
3300020581\|Ga0210399_11039144	Not Available	658	Open in IMG/M
3300020581\|Ga0210399_11099652	Not Available	636	Open in IMG/M
3300020582\|Ga0210395_10210706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1458	Open in IMG/M
3300020583\|Ga0210401_10182758	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300020583\|Ga0210401_10445034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300020583\|Ga0210401_10499141	Not Available	1079	Open in IMG/M
3300021168\|Ga0210406_10357687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300021168\|Ga0210406_10440816	Not Available	1038	Open in IMG/M
3300021168\|Ga0210406_10930895	Not Available	652	Open in IMG/M
3300021170\|Ga0210400_10434805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300021170\|Ga0210400_11346923	Not Available	571	Open in IMG/M
3300021180\|Ga0210396_10042463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4184	Open in IMG/M
3300021180\|Ga0210396_10816268	Not Available	799	Open in IMG/M
3300021403\|Ga0210397_10296694	Not Available	1186	Open in IMG/M
3300021403\|Ga0210397_10378299	Not Available	1055	Open in IMG/M
3300021405\|Ga0210387_11776666	Not Available	520	Open in IMG/M
3300021406\|Ga0210386_10246054	Not Available	1525	Open in IMG/M
3300021406\|Ga0210386_10263426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1472	Open in IMG/M
3300021406\|Ga0210386_10826031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	796	Open in IMG/M
3300021406\|Ga0210386_11314885	Not Available	608	Open in IMG/M
3300021407\|Ga0210383_11250190	Not Available	622	Open in IMG/M
3300021432\|Ga0210384_11123423	Not Available	689	Open in IMG/M
3300021432\|Ga0210384_11318415	Not Available	627	Open in IMG/M
3300021432\|Ga0210384_11717669	Not Available	533	Open in IMG/M
3300021432\|Ga0210384_11759300	Not Available	525	Open in IMG/M
3300021474\|Ga0210390_10201187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1684	Open in IMG/M
3300021477\|Ga0210398_10448593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	1051	Open in IMG/M
3300021479\|Ga0210410_11384362	Not Available	596	Open in IMG/M
3300021479\|Ga0210410_11402477	Not Available	591	Open in IMG/M
3300021860\|Ga0213851_1755391	Not Available	583	Open in IMG/M
3300022533\|Ga0242662_10065206	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300022533\|Ga0242662_10309793	Not Available	529	Open in IMG/M
3300025898\|Ga0207692_10500052	Not Available	771	Open in IMG/M
3300025898\|Ga0207692_10854882	Not Available	597	Open in IMG/M
3300025905\|Ga0207685_10487032	Not Available	647	Open in IMG/M
3300025906\|Ga0207699_10327985	Not Available	1075	Open in IMG/M
3300025928\|Ga0207700_11023173	Not Available	739	Open in IMG/M
3300025929\|Ga0207664_10659771	Not Available	940	Open in IMG/M
3300025929\|Ga0207664_10772557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300025939\|Ga0207665_10382401	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300026998\|Ga0208369_1016404	Not Available	705	Open in IMG/M
3300026999\|Ga0207949_1002232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1667	Open in IMG/M
3300027071\|Ga0209214_1049676	Not Available	568	Open in IMG/M
3300027174\|Ga0207948_1042556	Not Available	548	Open in IMG/M
3300027371\|Ga0209418_1047727	Not Available	759	Open in IMG/M
3300027698\|Ga0209446_1002533	All Organisms → cellular organisms → Bacteria	4450	Open in IMG/M
3300027812\|Ga0209656_10007007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7223	Open in IMG/M
3300027812\|Ga0209656_10349665	Not Available	672	Open in IMG/M
3300027824\|Ga0209040_10176320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300027824\|Ga0209040_10341395	Not Available	714	Open in IMG/M
3300027903\|Ga0209488_11230876	Not Available	502	Open in IMG/M
3300030882\|Ga0265764_118101	Not Available	500	Open in IMG/M
3300030913\|Ga0265759_101291	Not Available	1003	Open in IMG/M
3300030988\|Ga0308183_1171500	Not Available	548	Open in IMG/M
3300030990\|Ga0308178_1065234	Not Available	711	Open in IMG/M
3300030990\|Ga0308178_1087670	Not Available	643	Open in IMG/M
3300030990\|Ga0308178_1094840	Not Available	626	Open in IMG/M
3300030990\|Ga0308178_1154564	Not Available	530	Open in IMG/M
3300031017\|Ga0265744_103924	Not Available	769	Open in IMG/M
3300031043\|Ga0265779_104756	Not Available	731	Open in IMG/M
3300031043\|Ga0265779_114471	Not Available	513	Open in IMG/M
3300031057\|Ga0170834_102777392	Not Available	544	Open in IMG/M
3300031099\|Ga0308181_1033303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	905	Open in IMG/M
3300031099\|Ga0308181_1176462	Not Available	514	Open in IMG/M
3300031128\|Ga0170823_13636774	Not Available	572	Open in IMG/M
3300031231\|Ga0170824_102099971	Not Available	778	Open in IMG/M
3300031231\|Ga0170824_107454087	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300031231\|Ga0170824_119307406	Not Available	616	Open in IMG/M
3300031231\|Ga0170824_125953712	Not Available	709	Open in IMG/M
3300031423\|Ga0308177_1034221	Not Available	501	Open in IMG/M
3300031424\|Ga0308179_1048274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense → Nitrospirillum amazonense Y2	547	Open in IMG/M
3300031446\|Ga0170820_13737242	Not Available	543	Open in IMG/M
3300031469\|Ga0170819_13547113	Not Available	566	Open in IMG/M
3300031561\|Ga0318528_10273662	Not Available	906	Open in IMG/M
3300031564\|Ga0318573_10462472	Not Available	683	Open in IMG/M
3300031564\|Ga0318573_10664538	Not Available	560	Open in IMG/M
3300031708\|Ga0310686_103516975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1344	Open in IMG/M
3300031708\|Ga0310686_117914695	Not Available	1450	Open in IMG/M
3300031753\|Ga0307477_10016056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5104	Open in IMG/M
3300031753\|Ga0307477_10321749	Not Available	1066	Open in IMG/M
3300031753\|Ga0307477_10616813	Not Available	730	Open in IMG/M
3300031754\|Ga0307475_10264063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1380	Open in IMG/M
3300031754\|Ga0307475_10740331	Not Available	782	Open in IMG/M
3300031754\|Ga0307475_10858769	Not Available	718	Open in IMG/M
3300031805\|Ga0318497_10610225	Not Available	612	Open in IMG/M
3300031897\|Ga0318520_10190493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1206	Open in IMG/M
3300031962\|Ga0307479_10495949	Not Available	1205	Open in IMG/M
3300031962\|Ga0307479_10674011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1014	Open in IMG/M
3300031962\|Ga0307479_11851304	Not Available	555	Open in IMG/M
3300032043\|Ga0318556_10477536	Not Available	652	Open in IMG/M
3300032120\|Ga0316053_107254	Not Available	733	Open in IMG/M
3300032160\|Ga0311301_12153241	Not Available	643	Open in IMG/M
3300032174\|Ga0307470_10612871	Not Available	816	Open in IMG/M
3300032180\|Ga0307471_102831996	Not Available	616	Open in IMG/M
3300032180\|Ga0307471_104235319	Not Available	507	Open in IMG/M
3300032205\|Ga0307472_100903144	Not Available	818	Open in IMG/M
3300032515\|Ga0348332_10119959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1046	Open in IMG/M
3300032515\|Ga0348332_11512958	Not Available	819	Open in IMG/M
3300032515\|Ga0348332_12425957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300032515\|Ga0348332_13273262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300032515\|Ga0348332_13434664	Not Available	697	Open in IMG/M
3300032515\|Ga0348332_13673553	Not Available	688	Open in IMG/M
3300032515\|Ga0348332_13790158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	908	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.29%
Aquatic	Environmental → Aquatic	14.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.18%
Freshwater	Environmental → Aquatic → Freshwater	14.71%
Plant Litter	Environmental → Terrestrial → Plant Litter	4.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.65%
Loam	Environmental → Terrestrial → Soil → Loam	22.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	4.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.59%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.29%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	4.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.24%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.29%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	4.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.18%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.59%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.59%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300019161	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030882	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030913	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031043	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101312033	3300001867	Forest Soil	MYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMIVVAAGITIRAHFHSAAKANSAPRENIIAIWT*
JGI26343J46809_10061761	3300003223	Bog Forest Soil	MNRYFWLLEHPAALLALVATAILAFAWPLEDVPSLVVAAVMMVVAAGITIRAHFHSAGMASLTSPI
JGIcombinedJ51221_100518842	3300003505	Forest Soil	MYHKEAMESKMYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT*
Ga0062385_102124382	3300004080	Bog Forest Soil	MNRYFWPAGHTAVPLALVATAILVFAWPLQNLPACVLAAVMIVVAAGITIRAHFHSARMG
Ga0062387_1006506242	3300004091	Bog Forest Soil	MNRYFWPAGHTAVPLTLVATAILVFAWPLENVPACVLAAGMMVVAAGIAIRAHFHSAGMG
Ga0062389_1009425012	3300004092	Bog Forest Soil	MESKMPFYFWPANHPAALLALVAIAILVPAWPLQNLPACVVAAVMVVVAAGITIRAHFRSTGHG*
Ga0058900_13212981	3300004099	Forest Soil	MYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT*
Ga0062386_1005100892	3300004152	Bog Forest Soil	MNRYFWLLEHPAVLLALVAGTILAFAWPLQDVPGGVVAALMLVVAAGITIRALP*
Ga0062386_1008206332	3300004152	Bog Forest Soil	MYHDEVMERKMNRYFWLLEHPAALLALVATAILAFAWPLEDVPSLVVAAVMMVVAAGITIRAHFHSAGMASLTSPIGPVKKI*
Ga0062386_1008485352	3300004152	Bog Forest Soil	MEGKMNRYFWPAEHPAVLLALVATAILVFAWPLENVPACVLAAVMIVAAAGIALRTHFHSVGMG*
Ga0062386_1010259081	3300004152	Bog Forest Soil	MYHDETMEGKVKHHFWPGDHPAVLLALVATTILVFAWPLENVPACVLAAVMMVAAAGIAIRAHFHSVGMG*
Ga0063455_1006918663	3300004153	Soil	MYHDQAMESKMNRYFWPADHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGMGY*
Ga0070709_109412431	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MYHDEAMESKMHGYFWRADHPAALLALVAFATLAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL*
Ga0070709_111900292	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGMG*
Ga0070714_1000798537	3300005435	Agricultural Soil	MQRYFWPADHPVALLALVATAILAFAWPLENVPACVLAAVMMVVAVGIAIRAHFHSASMG
Ga0070714_1001233183	3300005435	Agricultural Soil	MYHDEAMESKMHGYFWPADHPAALLALVAFAILAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL*
Ga0070713_1004360051	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHHDEAMESKMQRYFWPADHPVALLALVATAILAFAWPLENVPACVLAAVMMVVAVGIAIRAHFHSASMG*
Ga0070713_1007527101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT
Ga0070713_1019600682	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MYHDEAMESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGMG*
Ga0070710_105554392	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MYHDEAMESKMHGYFWPADHPAALLALVAFAILAFAWPLENVAACVLAAVMVVVAAGITIRAHFHSATRAL*
Ga0070699_1008195702	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MYHDEAMESKMYRYFWPADHPAALMALVATAILVFAWPSENVPACVAAAVMMVVAAGIAIRAHFRSASMD*
Ga0070697_1011524521	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYHDEAMESKMYRYFWPADHPAALLALVATAILVFAWPMENVPACVFAAVMMVVAAGIAIRAHFRSASMD*
Ga0066706_113249301	3300005598	Soil	MYHDEAMESKCTAIFGPADHPAALLALVAFAILAVAWPLENVPACVLAAVMVVVAAGITIRAHF
Ga0070762_110192972	3300005602	Soil	MYHDVAMESKNAPLFLASRHPAALLALVATALLVFAWPSENVPACVLAAVMMAVAAGIAIWAHFHPVRMS*
Ga0070763_100080833	3300005610	Soil	MLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT*
Ga0070766_100681874	3300005921	Soil	MYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNVI
Ga0070717_103266123	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VIRRLSFSVEMYHDEAMESKMHGYFWRADHPAALLALVAFAILAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL*
Ga0070712_1003727072	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIRRLSFSVEMYHDEAMESKMHGYFWRADHPAALLALVAFAILAFAWPLENVAACVLAAVMVVVAAGITIRAHFHSATRAL*
Ga0070765_1018734541	3300006176	Soil	MYHDVAMESKNAPLFLASRHPAALLALVATALLVFAWPSENVPACVLAVMMAVAAGIAIWAHFHPVRMS*
Ga0116216_107856282	3300009698	Peatlands Soil	YFWPAGHTAVPLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHFHSAGAG*
Ga0126318_100339161	3300010152	Soil	MESKMRRYFWPADHPAAMLALVATIILVFAWPLENVPACVLATVMMVVAAGITIRAQFHSADMG*
Ga0074044_106493311	3300010343	Bog Forest Soil	LRKSQSYTAVIGEFFPEMHHDEAMEGKMNRYFWLLDHPAVLLALVAGTILAFAWPMRDVPACVVAALMMVVAAVITIRALP*
Ga0150983_108563941	3300011120	Forest Soil	MHRYFWLLDHPAALLALVAGMILAFAWPLQDVPACVLAALMIVVAAGITIRAHFHSARTG
Ga0150983_115046792	3300011120	Forest Soil	MCHDVAMEGKMNRYFWPADHPAAFLALVATVILVFAWPLENVPACVLAAVMMVVAAGITIRAHFQSAGMA*
Ga0150983_116415661	3300011120	Forest Soil	MYHKEAMESKMYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHIHSAAKANSAPREKNIIAIWT*
Ga0150983_124698371	3300011120	Forest Soil	MHRYFWPADHPAALLALVATALLVFAWPSENVPACVLAAVMMAVAAGIAIWAHFHPVRMS
Ga0150983_124894611	3300011120	Forest Soil	MYHDEAMESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACASAAVMMVVAAGLAIRAHFHSAGMG*
Ga0150983_163923001	3300011120	Forest Soil	FSVEMYHDEAMESKMHGYFWRADHPAALLALVAFATLAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL*
Ga0137363_110687601	3300012202	Vadose Zone Soil	VKRYYDYLSFSSAEMYHDEAMESKMYRYFWPADHPAALLALVATAILVFAWPSENVPACVFAAVMIVVAAGIAIRAHFRSASMG*
Ga0137361_100846002	3300012362	Vadose Zone Soil	MYHDEAMESKMYRYFWPADHPAALLALVATAILVFAWPSENVPACVFAAVMIVVAAGIAIRAHFRSASMG*
Ga0137359_117088862	3300012923	Vadose Zone Soil	MYHDEAMESKCTAIFGPADHPAALLALVAFAILAVAWPLENVPACVLAAVMVVVAAGITIRAHFGQHVARWHDQAAEQP
Ga0164299_116862831	3300012958	Soil	MYHDEAMESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACASAAVMMVVAAGLAIRAHFHSASMG*
Ga0164309_106043111	3300012984	Soil	FFSAEMYHDEAMESKMNRYFWPTDHPAASLALVATAILAFAWPLDNVPACVLAAVMVVVAAGITIRAHFHSATRAL*
Ga0164305_107546793	3300012989	Soil	LQMHHDEAMESKMQRYFWPADHPVALLALVATAILAFAWPLENVPACVLAAVMMVVAVGIAIRAHFHSATMG*
Ga0181535_105878591	3300014199	Bog	MESKMRSYFWPTDHPAALLALVATAILAFAWPLQNVPACVLAAVMMVVAAGITVRAHFHSAGTG*
Ga0187802_101352193	3300017822	Freshwater Sediment	MPHDEAMEGKMNRYFWLLDHPAVLLALVAGTILAFAGPLRDVPACVVAALMLVVAAGITIRALP
Ga0187818_101553191	3300017823	Freshwater Sediment	MNRYFWLLDHPAVLLALVAGTILAFTGPLRDVPACVVAALMLVVAAGITIRALP
Ga0187818_104870562	3300017823	Freshwater Sediment	MYHDEAMEGKMNRYFWPADHPAAFLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHFHSVGMG
Ga0187819_100467041	3300017943	Freshwater Sediment	MYHDEAMEGKMNRYFWPADHPAAFLALVATAILVFAWPLENVPACVLAAAMIVVAAGITIRAHFQSAGMG
Ga0187819_100546153	3300017943	Freshwater Sediment	MNRYFWLLDHPAVLLALVAGTILAFAGPLRDVPACVVAALMLVVAAGITIRALP
Ga0187817_105344921	3300017955	Freshwater Sediment	MYHDEAMEGKMNRYFWPADHPAVLLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHFHSAGMG
Ga0187815_103754652	3300018001	Freshwater Sediment	MPHDEAMEGKMNRYFWLLDHPAVLLALVAGTILAFAGPLRDVPACVVAALMLVVAAGITIRAHFQSAGMA
Ga0187804_100706352	3300018006	Freshwater Sediment	VEIYHDEAMESKMYRYFWPADHPAALLALVATSILVFAWPMENVLACVLAAVMMVVAAGITIRAHFHTAGMG
Ga0187804_103697322	3300018006	Freshwater Sediment	MYHDEAMEGKMNRYFWPADHPAAFLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHLRSAWA
Ga0184602_1179312	3300019161	Soil	GKMNHYFWPAGHTAVPLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHFHSAGVG
Ga0184589_1056932	3300019165	Soil	MNHYFWPAGHTAVPLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHFHSAGVG
Ga0210407_107501342	3300020579	Soil	MHRYFWPADHPAALLALVATALLVFAWPSENVPACVLAAVMMVVAAGIAIWAHFHPVRMS
Ga0210407_112552831	3300020579	Soil	MHHDEAMESKMQRYFWPADHPVALLALVATAILAFAWPLENVPACVLAAVMMVVAVGIAIRAHFHSATMG
Ga0210403_100479167	3300020580	Soil	MYRYFWPSEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT
Ga0210403_101685543	3300020580	Soil	VILRLSQMFPVEMYHDEATESKMRHYFWPADHPAAMLAVVATAILVFAWPMENVPACVVAAVMIVVAGGIAIRAHYHSARMG
Ga0210403_101697183	3300020580	Soil	MHYDFWLADHPAALLALVATAILAFAWPMETVPACVSAAVMIVVAAGIAIRAHFHSASMG
Ga0210403_103563482	3300020580	Soil	MESKMHYDFWPADHPAALLALVATAILLVAWPMENVPACVLAAVMIAVAGTMAIRAHFRSARMG
Ga0210403_106486152	3300020580	Soil	MYDDEAMESEMDQYFWPARHPAALLALGATAILLVAWPLENVPACVLAAVMIAVAGSMTVWAHFRSARMG
Ga0210403_114849051	3300020580	Soil	MHRYFWPADHPAALLALVATALLVFAWPSENVPACVLAAVMMVVAAGIAIWAHF
Ga0210399_102793721	3300020581	Soil	MYHKEAMESKMYRYFWPSEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT
Ga0210399_110391441	3300020581	Soil	MFPVEMYHDEATESKMRHYFWPADHPAAMLAVVATAILVFAWPMENVPACVVAAVMIVVAGGIAIRAHYHSARMG
Ga0210399_110996522	3300020581	Soil	RAMESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGMG
Ga0210395_102107061	3300020582	Soil	MPVFSLETHHDKAMESKMQHYFWPADHPAALLTVVATAILVFAWPLENVPACVVAATMMVVAAGITLRARFRSAG
Ga0210401_101827583	3300020583	Soil	MHRYFWSAKQSAALLALVAAAILAFAWPLENVPACVLAAVMIVVAAGITMRARFRSAGMG
Ga0210401_104450342	3300020583	Soil	VIRRLSFSVEMYHDEAMESKMHGYFWRADHPAALLALVAFATLAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL
Ga0210401_104991413	3300020583	Soil	VRNLTIISAFFSVEMYHNEAMESKMDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGITIRAHFRSARMG
Ga0210406_103576872	3300021168	Soil	MESKMHRYFWPADHPAALLALVAIAILVFAWPSENVPACVLAAVMMVVAGGIAIRAHFRSASMG
Ga0210406_104408162	3300021168	Soil	MYHDEAMESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGMG
Ga0210406_109308951	3300021168	Soil	MHHDEAMESKMQRYFWPADHPVALLALVATAILAFAWPLENVPACVLAAVMMVVAVGIAIRAHFHSASMG
Ga0210400_104348052	3300021170	Soil	MYHDEAMESKMYRYFWPADHPAALLALVATAILVFAWPSENVPACVAAAVMMVVAAGIAIRAHFRSASMD
Ga0210400_113469231	3300021170	Soil	MHGYFWSAKQSAALLALVAAAILAFAWPLENVPACVLAAVMIVVAAGITMRARFRSAGMG
Ga0210396_100424631	3300021180	Soil	HPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGITIRAHFRSARMG
Ga0210396_108162681	3300021180	Soil	VRNLTIISAFFSVEMYHNEAMESKMDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGITIRANLR
Ga0210397_102966943	3300021403	Soil	MHRYFWSAKQSATLLALVAAAILAFAWPLENVPACVLAAVMIVVAAGITMRARFRSAGMG
Ga0210397_103782992	3300021403	Soil	VRNLTIISAFFSVEMYHNDAMESKMDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGITIRAHFRSARMG
Ga0210387_117766662	3300021405	Soil	MHYDFWPADHPAALLALVATAILLVAWPMENVPACVLAAVMIAVAGTMAIRAHFRSARMG
Ga0210386_102460543	3300021406	Soil	MDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIAVAGGIAIRAHFRSARMG
Ga0210386_102634262	3300021406	Soil	MHGYFWSAKQSAALLALVAAAILAFAWPLENVPACMLAAVMIVVAAGITVRARFRSAGMG
Ga0210386_108260311	3300021406	Soil	VIRRLSFSVEMYHDEAMESKMHGYFWRPDHPAALLALVAFATLAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL
Ga0210386_113148852	3300021406	Soil	VRNLTIISAFFSVEMYHDEAMESKMDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGI
Ga0210383_112501901	3300021407	Soil	LETHHDKAMESKMQHYFWPADHPAALLTVVATAILVFAWPLENVPACVVAATMMVVAAGITLRARFRSAGMG
Ga0210384_111234232	3300021432	Soil	MYHDEAMESKMHGYFWRADHPAALLALVAFATLAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL
Ga0210384_113184152	3300021432	Soil	FFSVEMYHNDAMESKMDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGITIRAHFRSARMG
Ga0210384_117176691	3300021432	Soil	VLRRAMESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGIAIRAHFHSAGMGY
Ga0210384_117593001	3300021432	Soil	MESKMNRYFWPTDHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGMG
Ga0210390_102011875	3300021474	Soil	MPVFSLETHHDKAMESKMQHYFWPADHPAALLTVVATAILVFAWPLENVPACVVAATMMVVAAGITLRARFRSAGMG
Ga0210398_104485932	3300021477	Soil	MEGKMNRYFWPADHPAALLVLVATAILVFAWPLENVPACVLAAVMMVVAAGLAIRAHFHSVGMG
Ga0210410_113843622	3300021479	Soil	MYHDDAMESEMNRYFWPADHPAASLALVATAILVVAWPLENMPACASAAVMMVVAAGLAIRAHFHSAGMG
Ga0210410_114024773	3300021479	Soil	HRYFWPADHPAALLALVATALLVFAWPSENVPACVLAAVMMAVAAGIAIWAHFHPVRMS
Ga0213851_17553911	3300021860	Watersheds	MNRYFWPAEHPAAFLALVSTVILVFAWPLENVPACVLAAVMMVVAASITIRAHFQSAGMA
Ga0242662_100652061	3300022533	Soil	MHRYFWLLDHPAAPLALVAGAILAVAGPLRDVPGCVVGALMMVVAAGITIRAHFHSAGYG
Ga0242662_103097931	3300022533	Soil	DEAMESEMDHYFWPARHPAALLALVATAILVFAWPLQNLPACVLAAVMIVVATGITIRAHFRSARMG
Ga0207692_105000522	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MNRYFWPTDHPAASLALVATAILVVAWPLENMPACALAAVMMVVAGGLAIRAHFHSAGMG
Ga0207692_108548822	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MHRYFWSAKQSAALLALVAAAILAFAWPLENVPACMLAAVMIVVAAGITVRARFRSAGMG
Ga0207685_104870322	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MHHDEAMESKMQRYFWPADHPVALVAAAILAFAWPLENVAACVLAAVMVVVAVGIAIRCIFIQPA
Ga0207699_103279851	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	IFLREMYHDEAMESKMHGYFWRADHPAALLALVAFAILAFAWPLENVATCVLAAVMVVVAAGITIRAHFHSATRAL
Ga0207700_110231731	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HKEALESKMYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT
Ga0207664_106597711	3300025929	Agricultural Soil	GYFWRADHPAALLALVAFAILAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL
Ga0207664_107725572	3300025929	Agricultural Soil	VIRRLSFSVEMYHDEAMESKMHGYFWPADHPAALLALVAFAILAFAWPLENVAACVLAAMMVVVAAGI
Ga0207665_103824012	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VIRRLSFSVEMYHDEAMESKMRGYFWPADHPAALLALVAFAILAFAWPLENVAACVLAAMMVVVAAGITIRAHFHSATRAL
Ga0208369_10164041	3300026998	Forest Soil	FFSVEMYHNDAMESKMDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMMAVAAGIAIWAHFHPVRMS
Ga0207949_10022322	3300026999	Forest Soil	MYHKEAMESKMYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT
Ga0209214_10496762	3300027071	Forest Soil	MYDDEAMESKMHRFFWPADHPAALLALVAFVILAFAWPLENVPACVLAAVMMVVAAGITVRTHFHSAGMGQ
Ga0207948_10425562	3300027174	Forest Soil	MYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT
Ga0209418_10477272	3300027371	Forest Soil	MHHKEAMESKMYRYFWPAEYPAAMLALVATAILVFAWPLQNVPACVVAAVMIVVAAGITIRAHFHSARMG
Ga0209446_10025332	3300027698	Bog Forest Soil	MYHDEVMERKMNRYFWLLEHPAALLALVATAILAFAWPLEDVPSLVVAAVMMVVAAGITIRAHFHSAGMASLTSPIGPVKKI
Ga0209656_100070071	3300027812	Bog Forest Soil	MNRYFWLLEHPAALLALVATAILAFAWPLEDVPSLVVAAVMMVVAAGITIRAHFHSAGMASLTSPIGPVKKI
Ga0209656_103496651	3300027812	Bog Forest Soil	MYHDEAMESKMYGYWPVDHPAALLALVATAILVFAWPMENVAACVLAAVMIVVAGGIAIRAHFHSASMGK
Ga0209040_101763203	3300027824	Bog Forest Soil	FFAEIYHDETMEGKMNRYFWPAEHPAVLLALVATAILVFAWPLENVPACVLAAVMIVAAAGIALRTHFHSVGMG
Ga0209040_103413952	3300027824	Bog Forest Soil	MPHDEAMEGKMNRYFWLLEHPAVLLALVAGTILAFAWPLQDVPGGVVAALMLVVAAGITIRALP
Ga0209488_112308761	3300027903	Vadose Zone Soil	MYHDEAMESKMYRYFWPADHPAALLALVATAILVFAWPSENVPACVFAAVMIVVAAGIAIRAHFRSASMG
Ga0265764_1181011	3300030882	Soil	MEGKMNRYFWPADHPAAFLALVATVILVFAWPLENVPACVLAAVMMVVAAGITIRAHFQSAGMA
Ga0265759_1012913	3300030913	Soil	FSLGIYHEEAMEGKMKPYFWPAGHTAVPLALVATAILVFAWPLENVPACVLAAAMMVVAAGIAIRAHFHTAGVG
Ga0308183_11715001	3300030988	Soil	VTLRLIPSFFSTEMYHDQAMESKMNRYFWPADHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGMGY
Ga0308178_10652341	3300030990	Soil	RDITIIPDFFAELYHDEAVESKMHHYFWLVDHPAVLLWLVAAAILAFAWPLENAPACVSAAVMIVVAAGIAIRAHLHSANMG
Ga0308178_10876701	3300030990	Soil	MYHDEAMESKMQRYFWPTDHPAALLALVATAILAVAWPLENVPACVLAAAMMVIAGGIAIRAHYRSASIG
Ga0308178_10948401	3300030990	Soil	MYHDDAMESKMQRHFWPADHPAALLALVGFAILAFAWPLENVPACVLAAVMVVVAAGITIRTHFHSASMG
Ga0308178_11545642	3300030990	Soil	YFWPADHPAALLALVALAILAVAWPLENMPACVLAAVMVILAAGVTIRAHFHSARMG
Ga0265744_1039242	3300031017	Soil	MKPYFWPAGHTAVPLALVATAILVFAWPLENVPACVLAAAMMVVAAGIAIRAHFHTAGVG
Ga0265779_1047562	3300031043	Soil	WPAGHTAVPLALVATAILVFAWPLENVPACVLAAAMMVVAAGIAIRAHFHTAGVG
Ga0265779_1144711	3300031043	Soil	SPKKSREKGSDITIISAVFSAEMCHDAAMEGKMNRYFWPADHPAAFLALVATVILVFAWPLENVPACVLAAVMMVVAAGITIRAHFQSAGMA
Ga0170834_1027773922	3300031057	Forest Soil	MDHYFWPARHPAALLALVATAILLVAWPMENVPACVLAAVMIAVAGSIAIRAHFRSARMG
Ga0308181_10333032	3300031099	Soil	EVILRLSQLFFSVKMCHYEAMESKMHGYFWPADHPAALLALVALAILAVAWPLENMPACVLAAVMVILAAGVTIRAHFHSARMG
Ga0308181_11764621	3300031099	Soil	MNRYFWPADHPAALLALVATAILIVAWPLENMPACVVAAVMLLVAAGIAIRAHFHSARMG
Ga0170823_136367741	3300031128	Forest Soil	FFLRSSVSRRGMESKMHYDFWPADHPAALLALVATAILVFAWPLENVPACVLAAAMVVVATGITLRAHFRSDSMG
Ga0170824_1018881052	3300031231	Forest Soil	MHHYFWPADHPAALLALVATAILVFAWPSENVPACVSAAVMIVVAAGIA
Ga0170824_1020999712	3300031231	Forest Soil	MYHGETMESKMNRYFWLADHPAALLALVATAILVFAWPSENVPACALAAVMMVVAGGIAIRAHFHSARMG
Ga0170824_1074540871	3300031231	Forest Soil	MESKMHYDFLPADHPAALLALVATAILAFAWPMENVPACVSAAVMIVVAAGIAIRAHFHSASMG
Ga0170824_1193074061	3300031231	Forest Soil	MYPGKAMESKMHGYFWPADHPAALLTLVAFAILAFAWPLENVPACVLAAVMVVVAAGITIRAHFHSASNG
Ga0170824_1259537121	3300031231	Forest Soil	MYHDEAMESKMYGYWPVDHPAALLALVATAILVFAWPLENVPACVLAAVMIVVAAGITIRAHFHSASMGK
Ga0308177_10342211	3300031423	Soil	MNRYFWPASHPAALLALVATAIIVFAWPSENVPACVLAAVMMVVAAGITIRAHFHSARMG
Ga0308179_10482741	3300031424	Soil	GRENRKVIVAISSAFFSVEIQPDEAMESKMNRYFWPADHPAALLALVATAILIVAWPLENMPACVVAAVMLVVAAGIAIRAHFHSARMGY
Ga0170820_137372421	3300031446	Forest Soil	MYLGETMESKMNRYFWLADHPAALLALVATAILVFAWPSENVPACALAAVMMIVAAGIAIRAHFRSASMG
Ga0170819_135471131	3300031469	Forest Soil	MDHDEAMESKMRHYFWPADHPAALLALVATAILVFAWPSENVPACVLAAVMMVVAGGIAIRAHFRSASMG
Ga0318528_102736621	3300031561	Soil	MDHYFWPARHPAALLALVAIAILVFAWPLQNLPACVLAAVMIIVAAGITIRAHFHSARIG
Ga0318573_104624721	3300031564	Soil	MESKMDHYFWPARHPAALLALVATAILVFAWPLQNLPACVLAAVMIAVAGGIAIRAHFRSARMG
Ga0318573_106645381	3300031564	Soil	MDHYFWPARHPAALLALVAIAILVFAWPLQNLPACVLAAVMIIVAAGITIRA
Ga0310686_1035169751	3300031708	Soil	MNRYFWLLDHPAVLVALVAGAILAFAWPLRDVPACVLAAVMMVVAAGITIRAHFQSAGMA
Ga0310686_1179146955	3300031708	Soil	MYHDEAIEGKMNRYFWPAGHTAVPLALVATAILVFAWPLENVPACVLAAVMMVVAAGIAIRAHFHSAGVG
Ga0307477_100160565	3300031753	Hardwood Forest Soil	MHRYFWSAKHSAALLALVATAILAFAWPLENVPACVLAAVMIVVAAVITMQARFRSAGIG
Ga0307477_103217491	3300031753	Hardwood Forest Soil	VFFSAKMYHKEAMESKMYRYFWPSEYPAAMLALVATAILVFAWPLQNVPACVVAAVMMVVAAGITIRAHFHSAAKANSAPREKNIIAIWT
Ga0307477_106168131	3300031753	Hardwood Forest Soil	MYHDEAMESKMDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGITIRAHFRSARMG
Ga0307475_102640632	3300031754	Hardwood Forest Soil	MESEMDHYFWPARHPAALLALIATAILVFAWPLQNVPACVLAAVMIVVAAGITIRAHFHSARMG
Ga0307475_107403311	3300031754	Hardwood Forest Soil	MHRYFWSAKHSAALLALVATAILAFAWPLENVPACVLAAVMIVVAAGITMQARFRSAGMG
Ga0307475_108587692	3300031754	Hardwood Forest Soil	MHHDQAMESKMNRYFWPADHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGLAIRAHFHSAGVGY
Ga0318497_106102253	3300031805	Soil	RHPAALLALVATAILVFAWPLQNLPACVLAAVMIAVAGGIAIRAHFRSARMG
Ga0318520_101904933	3300031897	Soil	AMESKMDHYFWPARHPAALLALVATAILVFAWPLQNLPACVLAAVMIAVAGGIAIRAHFRSARMG
Ga0307479_104959491	3300031962	Hardwood Forest Soil	SKMHRYFWSAKHSAALLALVATAILAFAWPLENVPACVLAAVMIVVAAVITMQARFRSAGIG
Ga0307479_106740112	3300031962	Hardwood Forest Soil	MDHYFWPARHPAALLALVAAAILVFAWPLQNLPACVLAAVMIVVATGITIRAHFRSARMG
Ga0307479_118513041	3300031962	Hardwood Forest Soil	MHHDQAMESKMNRYFWPADHPAASLALVATAILVVAWPLENMPACALAAVMMVVAAGIAIRAHFH
Ga0318531_100413551	3300031981	Soil	MDHYFWPARHPAALLALVAIAILVFAWPLQNLPACVLAAVMI
Ga0318556_104775362	3300032043	Soil	FYFVEMYDDEAMESKMDHYFWPARHPAALLALVATAILVFAWPLQNLPACVLAAVMIAVAGGIAIRAHFRSARMG
Ga0316053_1072541	3300032120	Soil	MNHYFWPAGHTAVPLALVATAILVFAWPLQNLPACVLAVVMIVVATGITIRAHFRSARMG
Ga0311301_121532411	3300032160	Peatlands Soil	MCITRGDGRAKMNRYFWPAGHTAVPLALVATAILVFAWPLENVPACVLAAVMMVAAAGIAIRAHFHSVGMG
Ga0307470_106128712	3300032174	Hardwood Forest Soil	AREDREVIRRLSFSVEMYHDEAMESKMHGYFWPADHPAALLALVAFAILAFAWPLENVATCVLAAVMVVVAAGITIRAHFHSATRAL
Ga0307471_1028319961	3300032180	Hardwood Forest Soil	MYHDEAMESKMYRYFWPADHPAALLALVATAILVFAWPMENVPACVFAAVMMVVAAGIAIRAHFRSASMG
Ga0307471_1042353192	3300032180	Hardwood Forest Soil	MHYDFWPADHPAALLALVATAILAFAWPMENVPACVSAAVMIVVAAGIAIRAHFHS
Ga0307472_1009031441	3300032205	Hardwood Forest Soil	MYHDEAMESKMYRYFWPADHPAALMALVATAILVFAWPSENVPACVAAAVMMVVAAGIAIRAHFRSASMG
Ga0348332_101199593	3300032515	Plant Litter	VNRYFWLLDHPAVLLALVAGAILAFAWPMRDVTACVLAALMMVVAAGITIRALP
Ga0348332_115129583	3300032515	Plant Litter	MNRYFWPAGHTAVPLTLAATAILVFAWPLENVPACVLAAGIMVVAAGIAIRAHFHSTGMG
Ga0348332_124259571	3300032515	Plant Litter	YNREEYHDYLSFFSVEIYHDEAMESEMDHYFWPARHPAALLALVATAILVFAWPLQNLPACVLAVVMIVVATGITIRAHFRSARMG
Ga0348332_132732621	3300032515	Plant Litter	AVLVALVAGAILAFAWPLRDVPSCVLAAVMMVVAAGITIRAHFQSAGMA
Ga0348332_134346641	3300032515	Plant Litter	MHRYFWLLDHPAALLALVAGTILAFAWPLRDVPAGVVAAMMMVVAAGIAIRAHFHSARYG
Ga0348332_136735532	3300032515	Plant Litter	MYHDEAMEGKMNRYFWLLDHPAVLVALVAGAILAFAWPLRDVPACVLAAVMMVVAAGITIRAHFQSAGMA
Ga0348332_137901582	3300032515	Plant Litter	ENREEYHDYLSFFFVEMYHDEAMESKMDHDFWPARHPATLLALVATAILFFAWPMENVPACVLAAVMIAVAGGIAIRAHFHSARMG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036347

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences