Metagenome / Metatranscriptome Family F036220

Basic Information
Family ID	F036220
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	43 residues
Representative Sequence	ASIERLEAEEPELAAALHRWLATTLAERLSDTLRSFDALLD
Number of Associated Samples	143
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.78 %
% of genes near scaffold ends (potentially truncated)	96.47 %
% of genes from short scaffolds (< 2000 bps)	88.82 %
Associated GOLD sequencing projects	138
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Most Common Taxonomy
Group	Bacteria (82.941 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.118 % of family members)
Environment Ontology (ENVO)	Unclassified (25.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.176 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.07% β-sheet: 0.00% Coil/Unstructured: 44.93%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF00916	Sulfate_transp	20.59
PF02142	MGS	11.76
PF03795	YCII	3.53
PF01740	STAS	3.53
PF04993	TfoX_N	1.76
PF00069	Pkinase	1.18
PF08241	Methyltransf_11	1.18
PF07676	PD40	1.18
PF09365	DUF2461	1.18
PF02583	Trns_repr_metal	1.18
PF01243	Putative_PNPOx	1.18
PF12802	MarR_2	1.18
PF05163	DinB	0.59
PF07366	SnoaL	0.59
PF13784	Fic_N	0.59
PF06032	DUF917	0.59
PF13860	FlgD_ig	0.59
PF01850	PIN	0.59
PF00144	Beta-lactamase	0.59
PF08002	DUF1697	0.59
PF12681	Glyoxalase_2	0.59
PF02574	S-methyl_trans	0.59
PF09339	HTH_IclR	0.59
PF07730	HisKA_3	0.59
PF00291	PALP	0.59
PF00884	Sulfatase	0.59
PF13378	MR_MLE_C	0.59
PF16400	DUF5008	0.59
PF00782	DSPc	0.59
PF01522	Polysacc_deac_1	0.59
PF02585	PIG-L	0.59
PF03174	CHB_HEX_C	0.59
PF12482	DUF3701	0.59
PF11798	IMS_HHH	0.59
PF01145	Band_7	0.59
PF08281	Sigma70_r4_2	0.59
PF00440	TetR_N	0.59
PF13011	LZ_Tnp_IS481	0.59
PF00211	Guanylate_cyc	0.59
PF00586	AIRS	0.59
PF00027	cNMP_binding	0.59
PF13180	PDZ_2	0.59
PF00486	Trans_reg_C	0.59
PF00221	Lyase_aromatic	0.59
PF13385	Laminin_G_3	0.59
PF00271	Helicase_C	0.59
PF13464	DUF4115	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	20.59
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	20.59
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	20.59
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	4.71
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.53
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	1.76
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	1.18
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.59
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.59
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.59
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.59
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.59
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	0.59
COG3535	Uncharacterized conserved protein, DUF917 family	Function unknown [S]	0.59
COG3525	N-acetyl-beta-hexosaminidase	Carbohydrate transport and metabolism [G]	0.59
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	0.59
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.59
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.59
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.59
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.59
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.59
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.59
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.59
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.12 %
Unclassified	root	N/A	15.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.53 %
Unclassified	root	N/A	15.88 %
Viruses	superkingdom	All Organisms → Viruses	0.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.94 %
Unclassified	root	N/A	15.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.12 %
Unclassified	root	N/A	15.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.18 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.00 %
Unclassified	root	N/A	15.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.18 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.76 %
Unclassified	root	N/A	15.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.59 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.65 %
Unclassified	root	N/A	15.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.76 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.59 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.59 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.65 %
Unclassified	root	N/A	15.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Candidatus Kerfeldbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria	0.59 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.59 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.59 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.65 %
Unclassified	root	N/A	15.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria → Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12	0.59 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.59 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.59 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.65 %
Unclassified	root	N/A	15.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.59 %
unclassified Nakamurella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella	0.59 %
Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria → Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12	0.59 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.65 %
Unclassified	root	N/A	15.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Nocardioides sp. Soil774	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil774	0.59 %
Nakamurella sp. PAMC28650	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella → Nakamurella sp. PAMC28650	0.59 %
Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria → Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12	0.59 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_12342167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300000956\|JGI10216J12902_104842102	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300001139\|JGI10220J13317_10306921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300004067\|Ga0055485_10174416	Not Available	599	Open in IMG/M
3300004114\|Ga0062593_102810830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300004157\|Ga0062590_102509162	Not Available	546	Open in IMG/M
3300004463\|Ga0063356_100592588	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300004463\|Ga0063356_101603260	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300004479\|Ga0062595_102511859	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300004480\|Ga0062592_102641437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300004778\|Ga0062383_10321228	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005105\|Ga0066812_1026100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005162\|Ga0066814_10086660	Not Available	569	Open in IMG/M
3300005332\|Ga0066388_100876920	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300005332\|Ga0066388_102612840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300005338\|Ga0068868_102109599	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005341\|Ga0070691_10961877	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005458\|Ga0070681_11489547	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005536\|Ga0070697_100904660	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005558\|Ga0066698_10669464	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005561\|Ga0066699_10115540	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300005568\|Ga0066703_10488273	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005617\|Ga0068859_100801008	Not Available	1030	Open in IMG/M
3300005719\|Ga0068861_100173530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1789	Open in IMG/M
3300005719\|Ga0068861_100536841	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005842\|Ga0068858_100666632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300006580\|Ga0074049_12740581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300006581\|Ga0074048_11380079	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006605\|Ga0074057_11393670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300006844\|Ga0075428_101256591	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300006846\|Ga0075430_100726479	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300006865\|Ga0073934_10029095	All Organisms → cellular organisms → Bacteria	5385	Open in IMG/M
3300006865\|Ga0073934_10256606	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300006876\|Ga0079217_11400845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	546	Open in IMG/M
3300006880\|Ga0075429_100215231	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300006903\|Ga0075426_11427756	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300006954\|Ga0079219_10895207	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300009098\|Ga0105245_10969575	Not Available	894	Open in IMG/M
3300009100\|Ga0075418_13082964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300009147\|Ga0114129_11314109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300009147\|Ga0114129_13198012	Not Available	533	Open in IMG/M
3300009156\|Ga0111538_11109301	Not Available	1000	Open in IMG/M
3300009157\|Ga0105092_10223846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1054	Open in IMG/M
3300009168\|Ga0105104_10869321	Not Available	527	Open in IMG/M
3300009171\|Ga0105101_10033780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2483	Open in IMG/M
3300009537\|Ga0129283_10181733	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300009789\|Ga0126307_10747962	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300009800\|Ga0105069_1037972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300009809\|Ga0105089_1037178	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300009811\|Ga0105084_1049761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300010029\|Ga0105074_1038485	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Kerfeldbacteria → Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12	828	Open in IMG/M
3300010047\|Ga0126382_11198666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300010301\|Ga0134070_10428674	Not Available	526	Open in IMG/M
3300010322\|Ga0134084_10453815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300010400\|Ga0134122_13009294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300010403\|Ga0134123_10950921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300012199\|Ga0137383_10400661	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300012204\|Ga0137374_10397802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1096	Open in IMG/M
3300012210\|Ga0137378_11492912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300012349\|Ga0137387_11269365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil774	517	Open in IMG/M
3300012355\|Ga0137369_10119758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2131	Open in IMG/M
3300012355\|Ga0137369_10163029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1757	Open in IMG/M
3300012355\|Ga0137369_10629677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300012355\|Ga0137369_10758645	All Organisms → cellular organisms → Bacteria → Terrabacteria group	664	Open in IMG/M
3300012362\|Ga0137361_11595876	Not Available	573	Open in IMG/M
3300012392\|Ga0134043_1080629	Not Available	974	Open in IMG/M
3300012944\|Ga0137410_11154849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300012955\|Ga0164298_10285922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300012957\|Ga0164303_10351638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300012984\|Ga0164309_10799827	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012985\|Ga0164308_10910261	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300012986\|Ga0164304_10774762	Not Available	737	Open in IMG/M
3300013764\|Ga0120111_1114177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300013770\|Ga0120123_1061876	Not Available	816	Open in IMG/M
3300013772\|Ga0120158_10051926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2824	Open in IMG/M
3300013772\|Ga0120158_10448526	Not Available	581	Open in IMG/M
3300014157\|Ga0134078_10198738	Not Available	817	Open in IMG/M
3300014268\|Ga0075309_1110008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300014272\|Ga0075327_1019214	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300014298\|Ga0075341_1006227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1361	Open in IMG/M
3300014321\|Ga0075353_1102501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300014324\|Ga0075352_1151704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300014326\|Ga0157380_11455148	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300015357\|Ga0134072_10337462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300015373\|Ga0132257_100474574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1531	Open in IMG/M
3300017657\|Ga0134074_1230885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300017965\|Ga0190266_11295736	Not Available	511	Open in IMG/M
3300018000\|Ga0184604_10211832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300018031\|Ga0184634_10556180	Not Available	507	Open in IMG/M
3300018063\|Ga0184637_10630008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300018078\|Ga0184612_10110427	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1440	Open in IMG/M
3300018078\|Ga0184612_10435575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300018081\|Ga0184625_10186455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1087	Open in IMG/M
3300018082\|Ga0184639_10543256	Not Available	579	Open in IMG/M
3300018429\|Ga0190272_11397147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300018429\|Ga0190272_13197166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	510	Open in IMG/M
3300018465\|Ga0190269_11562217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → unclassified Nakamurella → Nakamurella sp. PAMC28650	548	Open in IMG/M
3300018466\|Ga0190268_10304762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	959	Open in IMG/M
3300018469\|Ga0190270_10306629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1418	Open in IMG/M
3300018469\|Ga0190270_10673509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300018469\|Ga0190270_11210087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300018481\|Ga0190271_11419905	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300019255\|Ga0184643_1159617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300019279\|Ga0184642_1120611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300019377\|Ga0190264_11273187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300020059\|Ga0193745_1110333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300020215\|Ga0196963_10389957	Not Available	623	Open in IMG/M
3300021080\|Ga0210382_10001633	All Organisms → cellular organisms → Bacteria	7450	Open in IMG/M
3300021081\|Ga0210379_10346639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300021081\|Ga0210379_10374359	Not Available	628	Open in IMG/M
3300022309\|Ga0224510_10451417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300022756\|Ga0222622_10445770	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300025319\|Ga0209520_10080343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2079	Open in IMG/M
3300025927\|Ga0207687_11331449	Not Available	617	Open in IMG/M
3300025972\|Ga0207668_10520738	All Organisms → Viruses → Predicted Viral	1026	Open in IMG/M
3300026032\|Ga0208419_1031653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300026050\|Ga0208293_1014533	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300026095\|Ga0207676_10022163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4670	Open in IMG/M
3300026102\|Ga0208914_1029922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300026530\|Ga0209807_1336979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300026548\|Ga0209161_10347815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300026550\|Ga0209474_10078399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2276	Open in IMG/M
3300027332\|Ga0209861_1017680	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300027560\|Ga0207981_1051197	Not Available	754	Open in IMG/M
3300027907\|Ga0207428_10790351	All Organisms → cellular organisms → Archaea	675	Open in IMG/M
3300027907\|Ga0207428_10961249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300027955\|Ga0209078_1113513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10431648	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300028381\|Ga0268264_10896030	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300028716\|Ga0307311_10273988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300028722\|Ga0307319_10318363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300028787\|Ga0307323_10260279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300028791\|Ga0307290_10247092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300028791\|Ga0307290_10361940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300028793\|Ga0307299_10082605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1195	Open in IMG/M
3300028793\|Ga0307299_10119306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	989	Open in IMG/M
3300028810\|Ga0307294_10226617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300028811\|Ga0307292_10003922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5042	Open in IMG/M
3300028811\|Ga0307292_10068068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1358	Open in IMG/M
3300028819\|Ga0307296_10019464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3571	Open in IMG/M
3300028824\|Ga0307310_10206392	Not Available	929	Open in IMG/M
3300028824\|Ga0307310_10231142	All Organisms → cellular organisms → Bacteria → Terrabacteria group	882	Open in IMG/M
3300028828\|Ga0307312_10311888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300028872\|Ga0307314_10062795	Not Available	955	Open in IMG/M
3300028875\|Ga0307289_10016603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2826	Open in IMG/M
3300028878\|Ga0307278_10039544	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2147	Open in IMG/M
3300028878\|Ga0307278_10105117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300028878\|Ga0307278_10389017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300028884\|Ga0307308_10612973	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300030006\|Ga0299907_10024899	All Organisms → cellular organisms → Bacteria	4565	Open in IMG/M
3300030006\|Ga0299907_10143200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1975	Open in IMG/M
3300030006\|Ga0299907_10329363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1240	Open in IMG/M
3300030006\|Ga0299907_10627614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300030990\|Ga0308178_1069728	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031228\|Ga0299914_11604375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300031229\|Ga0299913_10033254	All Organisms → cellular organisms → Bacteria	4863	Open in IMG/M
3300031229\|Ga0299913_11824825	Not Available	556	Open in IMG/M
3300031576\|Ga0247727_10065290	All Organisms → cellular organisms → Bacteria	4199	Open in IMG/M
3300031731\|Ga0307405_11166642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300031847\|Ga0310907_10786052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300031854\|Ga0310904_10340389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	964	Open in IMG/M
3300031949\|Ga0214473_11935078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300032017\|Ga0310899_10383608	Not Available	670	Open in IMG/M
3300032516\|Ga0315273_11649296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300033416\|Ga0316622_100663525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1204	Open in IMG/M
3300033551\|Ga0247830_10022500	All Organisms → cellular organisms → Bacteria	3763	Open in IMG/M
3300033551\|Ga0247830_10049354	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300034176\|Ga0364931_0019726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1891	Open in IMG/M
3300034257\|Ga0370495_0141587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.29%
Host-Associated	Host-Associated	14.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.59%
Aquatic	Environmental → Aquatic	14.71%
Plants	Host-Associated → Plants	14.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.82%
Freshwater	Environmental → Aquatic → Freshwater	7.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Sediment	Environmental → Aquatic → Sediment	4.71%
Marine	Environmental → Aquatic → Marine	1.18%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.18%
Unclassified	Environmental → Aquatic → Unclassified	0.59%
Cave	Environmental → Terrestrial → Cave	0.59%
Floodplain	Environmental → Terrestrial → Floodplain	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.71%
Sand	Environmental → Terrestrial → Soil → Sand	4.12%
Loam	Environmental → Terrestrial → Soil → Loam	2.94%
Lake	Environmental → Aquatic → Freshwater → Lake	1.18%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.59%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.59%
Sediment	Environmental → Aquatic → Marine → Sediment	0.59%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.53%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.53%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.35%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.18%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.18%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.59%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.59%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.59%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.59%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.59%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.29%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.53%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.53%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.35%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.35%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.18%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.18%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.18%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.59%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.59%
Beach Aquifer Porewater	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater	0.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.59%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.59%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.59%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.59%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009537	Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - D-2W	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014298	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026032	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026050	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026102	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027955	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036220

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_123421671	3300000890	Soil	AEDPELAAALHRWLATTLAGRLGESLKAFDALFD*
JGI10216J12902_1048421022	3300000956	Soil	IAEVPSVVLTLSRASIRRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD*
JGI10220J13317_103069212	3300001139	Soil	VAETPCVVLRLSRAAIARMEAEEPELGAALHGWLARTMALRLTDRTRALDSLLD*
Ga0055485_101744162	3300004067	Natural And Restored Wetlands	RLEAEQPELAAEFHRWLATALADRLSDTMRTFDALVDQT*
Ga0062593_1028108302	3300004114	Soil	LDEIERTDPELAAALHRWLAATLAGRLNDAMNAFDALLD*
Ga0062590_1025091622	3300004157	Soil	SLERMQRVDPALAADVHRWFARVLADRLGDTLRAVDALSD*
Ga0063356_1005925881	3300004463	Arabidopsis Thaliana Rhizosphere	RNADVVAETPCVVLGLTRAALERLEIEEPDAAAALHRWLATTLSVRLTDSQRAYLTMLD*
Ga0063356_1016032602	3300004463	Arabidopsis Thaliana Rhizosphere	IERLEAEEPELAAALHRWLATTLAERLTDTMRTFDVLLD*
Ga0062595_1025118591	3300004479	Soil	ASIQRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0062592_1026414371	3300004480	Soil	YTGAARNADVVAETPCVVLGLTRAALERLEIEEPDAAAALHRWLATTLSVRLTDSQRAYLTMLD*
Ga0062383_103212282	3300004778	Wetland Sediment	VVLHLPAGSIAQMEAEEPELAAALHRWLARTLASRLNETLRAADALFD*
Ga0066812_10261002	3300005105	Soil	SIERIEADDPELAAALHRWLAATLAGRLGDSLKAFDALLD*
Ga0066814_100866601	3300005162	Soil	RASIERLEAEEPESAAAMHRWLATMLATRLTDAQRAFTALLD*
Ga0066388_1008769202	3300005332	Tropical Forest Soil	DVPSVIYRLRRGEIERLETDDPRAAAALHRWLATALATRLTDAQRLYSALLD*
Ga0066388_1026128403	3300005332	Tropical Forest Soil	EDIERLEREQPELAATLHRWLATQLAERLTDTLGVVDALLD*
Ga0068868_1021095991	3300005338	Miscanthus Rhizosphere	VVMRLGRASIERIEATEPALAAALHRWLATTLSERLTETQRAVMALFD*
Ga0070691_109618772	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	SVVLTLSRASIQRLETEEPATAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0070681_114895471	3300005458	Corn Rhizosphere	RLSKTAIERMETDDPELAAALHRWLATTIAGRLGESLHAFDALFD*
Ga0070697_1009046602	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RSSIERMEAEEPEIAASLHRWLATMLAERLTDSQRAFSALLD*
Ga0066698_106694641	3300005558	Soil	ADVTAEVPSVVLRLRRASIERLEAEDPQAAAAVHRWLAAALATRLTDAQRVYSALLD*
Ga0066699_101155401	3300005561	Soil	IVLRLSRASIERMEAAEPELAAALHRWLARTLAERLTDTMRAFDALLD*
Ga0066703_104882731	3300005568	Soil	ALSRASIERLEAEEPVKAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0068859_1008010082	3300005617	Switchgrass Rhizosphere	RIEASEPALAAALHRWLATALSERLNDTLHAFDALMD*
Ga0068861_1001735301	3300005719	Switchgrass Rhizosphere	IESEDPALASAMHRWLGGVLSERLSDTLREFDALLD*
Ga0068861_1005368412	3300005719	Switchgrass Rhizosphere	ERIEASEPALAAALHRWLATALSERLNDTLHAFDALMD*
Ga0068858_1006666322	3300005842	Switchgrass Rhizosphere	RIEATEPALAAALHRWLATTLSERLTETQRAVMALFD*
Ga0074049_127405811	3300006580	Soil	RASIERMERSEPELAAALHRWLATTLSDRLTETQRAAMALFD*
Ga0074048_113800791	3300006581	Soil	RASIERLETEEPETAAALHRWLATTLAVRLTDADRAFSASLD*
Ga0074057_113936701	3300006605	Soil	ASIERMERSEPELAAALHRWLATTLSERLTETQRAAMALFD*
Ga0075428_1012565912	3300006844	Populus Rhizosphere	ERLEAEEPETAAMLHRWLATTLAERLTDTMGVVDALLD*
Ga0075430_1007264792	3300006846	Populus Rhizosphere	RMEADEPELAAAMHRWLARTLSERLTDTLREFDALLD*
Ga0073934_100290954	3300006865	Hot Spring Sediment	STDPELAAALHRWLATTLAQRLGETLRAVDALLD*
Ga0073934_102566061	3300006865	Hot Spring Sediment	LERIGSQDPELAATLHRWLATTLAERLGDTLRSVDALLD*
Ga0079217_114008452	3300006876	Agricultural Soil	SEDPNLAAALHRWLATTLAERLRGTLTVVDALLD*
Ga0075429_1002152311	3300006880	Populus Rhizosphere	SVVLRIGREAIARLEVEAPETAVMLHRWLATMLAERLTNSMRTIDVLLDR*
Ga0075426_114277561	3300006903	Populus Rhizosphere	VLRLRRASIERLEADDPQAAAAVHRWLATALATRLTDVQRVYSELLD*
Ga0079219_108952071	3300006954	Agricultural Soil	EAEEPALAVRLHRWLATTLAARVSDSIRTYEALLP*
Ga0105245_109695752	3300009098	Miscanthus Rhizosphere	SIRRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0075418_130829641	3300009100	Populus Rhizosphere	VPSVVLRIGRESIERLEAEEPELAATLHRWLATQLAERLTDTMRTFDVLLD*
Ga0114129_113141092	3300009147	Populus Rhizosphere	ERLETEEPALAAALHRWLATTLAERLSDTRGALDALLD*
Ga0114129_131980121	3300009147	Populus Rhizosphere	CEVLRLSRASMERMERDEPELAVALHRRLAESLAERSRDAMRVFDELLG*
Ga0111538_111093011	3300009156	Populus Rhizosphere	VVLRIGRDSIERLEAEEPETAAMLHRWLATTLAERLTDTMGVVDALLD*
Ga0105092_102238463	3300009157	Freshwater Sediment	IERVEAADPALAAALHRWLATTLSERLGESLRAFDALFD*
Ga0105104_108693212	3300009168	Freshwater Sediment	VDEPELAAAVHRWLARTLSERLSDTLREFDALLD*
Ga0105101_100337803	3300009171	Freshwater Sediment	FSAGSIARMDADEPEVAAALHRWLATTLADRLNETLRAADALLD*
Ga0129283_101817331	3300009537	Beach Aquifer Porewater	IERMEAAEPELAAELHRWLAGTLAERLTDTQRAVEALFD*
Ga0126307_107479623	3300009789	Serpentine Soil	LRLGKGSIDRIEADDPQLAAALHRWLATTLAGRLGDSLRAFDALLD*
Ga0105069_10379721	3300009800	Groundwater Sand	LEAQDPLLAAALHRWLAGVLSERLSDTLREFDALLD*
Ga0105089_10371782	3300009809	Groundwater Sand	ESIERMEADDPELAAALHRWLAMTLAGRLGDSLKAFDALLD*
Ga0105084_10167061	3300009811	Groundwater Sand	RLDRASIARIEAEDPALASAMHRWLGGVLSERLSDTLREFDALLD*
Ga0105084_10497612	3300009811	Groundwater Sand	VVLRFSRESIARMEAEEPEVAAALHRWLATTLAERLNDNLRAVDALLD*
Ga0105074_10384852	3300010029	Groundwater Sand	GASIERMEAERPELAAALHRWLATTLAERLGETMRVFDALLD*
Ga0126382_111986662	3300010047	Tropical Forest Soil	ARIEAEAPELASALHRWLAWTLAERLGETLRTFDAMLD*
Ga0134070_104286741	3300010301	Grasslands Soil	SIERLEAEEPERAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0134084_104538152	3300010322	Grasslands Soil	RASIERLEAEEPERAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0134122_130092942	3300010400	Terrestrial Soil	ERIETTEPALAAALHRWLATTLSERLTETQRAVMALFD*
Ga0134123_109509212	3300010403	Terrestrial Soil	ERIEATEPALASALHRWLATTLSERLTDTQRAVMALFD*
Ga0137383_104006613	3300012199	Vadose Zone Soil	DVIAEVPSVVLALSRASIQRLEAEEPARAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0137374_103978022	3300012204	Vadose Zone Soil	SIARMEAEEPEVAAALHRWLATTLAERLNDTLRAVDALLD*
Ga0137378_114929121	3300012210	Vadose Zone Soil	MEAADPELAAALHRWLATTLAERLDDSLRAFEPLLD*
Ga0137387_112693652	3300012349	Vadose Zone Soil	SKASLERLQAEEPETAAALHRWLATTLAERLADSQRAFSALLD*
Ga0137369_101197582	3300012355	Vadose Zone Soil	EQLEADEPELAAALHRWLARTLAERLGDMSKGLDALLD*
Ga0137369_101630291	3300012355	Vadose Zone Soil	SIERMEAEEPQLAAALHRWFARTLAERPTDRMRALDSLLD*
Ga0137369_106296771	3300012355	Vadose Zone Soil	SIEQLEADEPELAAALHRWLARTLAERLGDMSKGLDALLD*
Ga0137369_107586451	3300012355	Vadose Zone Soil	SVVLRIGRESIERLEAEEPELAAALHRWLATTLAERLTDTLGVVDALLD*
Ga0137361_115958761	3300012362	Vadose Zone Soil	AISRASIERLEAEEPARAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0134043_10806293	3300012392	Grasslands Soil	SRDSIKRLEVEDSARAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0137410_111548491	3300012944	Vadose Zone Soil	LTRASIERMERSEPELAAELHRWLATTVSERLTDTLRAFDALLD*
Ga0164298_102859223	3300012955	Soil	VVLTLSRAAIQRLEAEEPATAASLHRWLATTLAVRLTDAQRVYSALLD*
Ga0164303_103516383	3300012957	Soil	QRLEAEEPATAAALHRWLATTLAVRLTDAQRVDSALLE*
Ga0164309_107998271	3300012984	Soil	QRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0164308_109102611	3300012985	Soil	IAEVPSVVLTLSRASIQRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0164304_107747622	3300012986	Soil	EAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0120111_11141771	3300013764	Permafrost	LGLSRASIERLEAEEPETAAALHRWLATMLAERLTDSQRAFSALLD*
Ga0120123_10618763	3300013770	Permafrost	AISRASIQRLEAEEPARAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0120158_100519264	3300013772	Permafrost	RLEADEPETAAALHRWLATTLAVRLTDSQRAFRALLD*
Ga0120158_104485262	3300013772	Permafrost	AEEPATAAALHRWLASTLAVRLIDLERAYSALLD*
Ga0134078_101987381	3300014157	Grasslands Soil	SRASIERLEAEEPERAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0075309_11100082	3300014268	Natural And Restored Wetlands	ARIEAEDPEAAAALHRWLAGTLAERLDDTMRGFDALID*
Ga0075327_10192141	3300014272	Natural And Restored Wetlands	EIDRLEAEEPALAVSLHRWFATTLAHRLTDRMRAFDTLLD*
Ga0075341_10062272	3300014298	Natural And Restored Wetlands	EAEQPELAAEFHRWLATALADRLSDTMRTFDALVDQT*
Ga0075353_11025012	3300014321	Natural And Restored Wetlands	RPPRSTSERVGSEEPELAAALHRWLAGMLAERLTDTQRAVDALID*
Ga0075352_11517041	3300014324	Natural And Restored Wetlands	PSMVLRLRRSAIERLEAEEPEEAAALHRWVAGTLAERLTDTQRAVDALFD*
Ga0157380_114551481	3300014326	Switchgrass Rhizosphere	TAIERMETDDPELAAALHRWLAATIAGRLGESLLAFDALFD*
Ga0134072_103374621	3300015357	Grasslands Soil	ADVPSVVLALSRDSIKRLEVEDSARAAALHRWLATTLAVRLTDAQRVYSALLD*
Ga0132257_1004745742	3300015373	Arabidopsis Rhizosphere	ERIEAAEPELAAQLHRWLAWTLADRLGDTMRTFDAMLD*
Ga0134074_12308852	3300017657	Grasslands Soil	RAALVRMEAEDPRLAAALHRRLAVTLAARVTDSLRVFDELMD
Ga0190266_112957362	3300017965	Soil	LDRASIDRLEAQDPELAAALHRWLAGVLSERLSDTLREFDALLD
Ga0184604_102118321	3300018000	Groundwater Sediment	IARLEAEEPELAAALHRWLATTLAERLTDTMRTFDVLLD
Ga0184634_105561802	3300018031	Groundwater Sediment	MEAAEPELAAHVHRWLGRTLAERLSDTLRAFDALLD
Ga0184637_106300082	3300018063	Groundwater Sediment	ESEEPELAAAVHRWLARTLSERLSDTLREFDALLD
Ga0184612_101104272	3300018078	Groundwater Sediment	EADDPELAAALHRWLARTLAERLDDTLKGFNALLD
Ga0184612_104355752	3300018078	Groundwater Sediment	LRGVTIRRMEADEPELAAAVHRWLARTLSERLSDTLREFDALLD
Ga0184625_101864551	3300018081	Groundwater Sediment	IERMESEDPELAAALHRWLAGILSDRLRDTLREFDALLD
Ga0184639_105432562	3300018082	Groundwater Sediment	VVLRLSGEAIERMEASEPELAAHVHRWLATTLSERLSDTVRAFDALLD
Ga0190272_113971471	3300018429	Soil	ISRESIARLEAEEPELAGALHRWLATTLAERLTDTMRTFDVLLD
Ga0190272_131971662	3300018429	Soil	LTRGSIERMEAAEPRLAAAVHRWLARTLAERLGDSLKAFDALID
Ga0190269_115622171	3300018465	Soil	DSIDRLEADEPEVAAALHRWFATTLAQRLAGTTQAFDTLLD
Ga0190268_103047622	3300018466	Soil	VVAETRSVVLRISRGSIERLEAEEPELAAALHRWLATTLAERLTDTMRTFDVLLD
Ga0190270_103066292	3300018469	Soil	EADEPELAAAVHRWLARTLSERLSDTLREFDALLD
Ga0190270_106735092	3300018469	Soil	GLTRAALERLEIEEPDAAAALHRWLATTLSVRLTDSQRAYLTLLD
Ga0190270_112100872	3300018469	Soil	IERLEAEEPELAAALHRWLATQLAERLTDTMRTFDVLLD
Ga0190271_114199052	3300018481	Soil	ASIERLEAEEPELAAALHRWLATTLAERLSDTLRSFDALLD
Ga0184643_11596172	3300019255	Groundwater Sediment	EVPSVVLALSRASIERLEAEEPARAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0184642_11206112	3300019279	Groundwater Sediment	EAQEPELAATLHRWLATTLAERLTDTMRTFDVLLD
Ga0190264_112731872	3300019377	Soil	ERLEAEEPELAAALHRWLARTLAERLTDTMRTFDVLLD
Ga0193745_11103332	3300020059	Soil	IERMEATEPELAAALHRWLATTLSERLTDTQRAVMALFD
Ga0196963_103899572	3300020215	Soil	GRMQAEDPALAAAVHRGLASTLAERLGDTLKLFDALAD
Ga0210382_1000163311	3300021080	Groundwater Sediment	ERLEAEEPELAATLHRWLATTLAERLSDARGVLDALLD
Ga0210379_103466392	3300021081	Groundwater Sediment	MEADEPELAAAVHRWLARTLSERLTDTLREFDALLD
Ga0210379_103743592	3300021081	Groundwater Sediment	ERVEAADPALAAALHRWLATTLSERLGESLRAFDALFD
Ga0224510_104514172	3300022309	Sediment	SISRLEAEQPELAAEFHRWLATALADRLSDTMRTFDALVDQT
Ga0222622_104457701	3300022756	Groundwater Sediment	DVIAELPSVVLTLSRASIQRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0209520_100803432	3300025319	Soil	LRLRRPAIERLESEEPELAAALHRWLAGTLAERLTDTQRAVEALFD
Ga0207687_113314491	3300025927	Miscanthus Rhizosphere	SIRRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0207668_105207381	3300025972	Switchgrass Rhizosphere	RLDRASIARIESEDPALASAMHRWLGGVLSERLSDTLREFDALLD
Ga0208419_10316531	3300026032	Natural And Restored Wetlands	IEAEDPEAAAALHRWLAGTLAERLDDTMRGFDALID
Ga0208293_10145332	3300026050	Natural And Restored Wetlands	VNLGRRRRVVVETPSVVLRLSEASIERLEADEPETAAALHRWLASTLAVRLTAADRAYSASMD
Ga0207676_100221631	3300026095	Switchgrass Rhizosphere	AIERMETDDPELAAALHRWLAATIAGRLGESLLAFDALFD
Ga0208914_10299221	3300026102	Natural And Restored Wetlands	PSMVLRLRRSAIERLEAEEPEEAAALHRWVAGTLAERLTDTQRAVDALFD
Ga0209807_13369791	3300026530	Soil	LALSRASIERLEAEEPVKAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0209161_103478151	3300026548	Soil	ASIEQMEAAEPELAAALHRWLAETLAERLSDASRAFDALLD
Ga0209474_100783993	3300026550	Soil	LRLSRESIERMEAEEPEVAAALHRWLATTLAERLNDTQRAFDALLE
Ga0209861_10176803	3300027332	Groundwater Sand	ESIERVEAADPALAAALHRWLATTLSERLGESLRAFDALFD
Ga0207981_10511972	3300027560	Soil	VAETPSVVLRFSRASIERLERAEPALAAALHRWLATTLSERLTDTQRAAMVLFD
Ga0207428_107903511	3300027907	Populus Rhizosphere	SIERLEAEEPETAAMLHRWLATTLAERLTDTMGVVDALLD
Ga0207428_109612491	3300027907	Populus Rhizosphere	RMETDDPELAAALHRWLATTIAGRLGESLLAFDALFD
Ga0209078_11135133	3300027955	Freshwater Sediment	ARMDADEPEVAAALHRWLATTLADRLNETLRAADALLD
(restricted) Ga0233417_104316481	3300028043	Sediment	EQMEVARPELAAELHRWLATTLSERLTETLRAYDALLD
Ga0268264_108960301	3300028381	Switchgrass Rhizosphere	IERMEAEDPELAAALHRWLATTLAGRLSESLKAFDALFD
Ga0307311_102739881	3300028716	Soil	ESIERLEAEEPELAATLHRWLATTLAERLSDTRGALDALLD
Ga0307319_103183631	3300028722	Soil	LEAQEPELAAALHRWLATQLAERLTDTLEAVDALLD
Ga0307323_102602791	3300028787	Soil	DRASIDRIEAEDPALASAMHRWLAGVLSERLSDTLREFDALLD
Ga0307290_102470922	3300028791	Soil	QIEAEEPELAAALHRWLAGILSERLRDTLREFDALLD
Ga0307290_103619401	3300028791	Soil	LRLSRAAIARLETEEPELAAALHRWLATTMALRLTDRMRALDALLD
Ga0307299_100826051	3300028793	Soil	LEAEEPELAATLHRWLATTLAERLSDARGVLDALLD
Ga0307299_101193061	3300028793	Soil	RRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0307294_102266172	3300028810	Soil	IDRIEAEDPALASAMHRWLAGVLSERLSDTLREFDALLD
Ga0307292_100039221	3300028811	Soil	IARIEAEDPALASAMHRWLAGVLSERLSDTLREFDALLD
Ga0307292_100680682	3300028811	Soil	SIDRIEAEDPALASAMHRWLAGVLSERLSDTLREFDALLD
Ga0307296_100194646	3300028819	Soil	IAEVPSVVLTLSRASIQRLETEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0307310_102063923	3300028824	Soil	ASIQRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0307310_102311422	3300028824	Soil	LEAEEPEAAAAMHRWLATTLAVRLTDSQRAYSALLD
Ga0307312_103118883	3300028828	Soil	LTLSRDSIQRLEAEEPATAAALHRWLATALAVRLTDAQRVYSALLD
Ga0307314_100627953	3300028872	Soil	LEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0307289_100166036	3300028875	Soil	EVPSVVLTLSRASIQRLEAEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0307278_100395443	3300028878	Soil	EQLEADEPELAAALHRWLARTLAERLGDTLKGFDALLD
Ga0307278_101051171	3300028878	Soil	ERLEAEEPATAAALHRWLAVTLAVRLTDAQRVYSALLD
Ga0307278_103890171	3300028878	Soil	IVVLRFSRESIARMETEEPEVAAAMHRWLATTLAERLHETLRAVDALLD
Ga0307308_106129731	3300028884	Soil	TPSVVLRLSRASLERLEAEEPETAAALHRWLATTLAHRLTDSQRAFSALLD
Ga0299907_100248991	3300030006	Soil	VIERLEAEEPELAAALHRWLATTLAERLTDSMRSFDMLLD
Ga0299907_101432001	3300030006	Soil	VVLRIGRESIERLEAEEPELAAALHRWLATTLAERLTDTRGAVDALLD
Ga0299907_103293632	3300030006	Soil	IRRMEADEPELAAAVHRWLARTLSERLTDTLREFDALLD
Ga0299907_106276142	3300030006	Soil	EQIARMEAEDPDVAARLHRWLAGTLADRLGDTMRTFDALLD
Ga0308178_10697281	3300030990	Soil	ADVIAEVPSVVLTLSRASIQRLETEEPATAAALHRWLATTLAVRLTDAQRVYSALLD
Ga0299914_116043752	3300031228	Soil	VPSVALRIGRESIERLEAEEPELAAALHRWLATTLAERLTDTMRTFDVLLD
Ga0299913_100332541	3300031229	Soil	SIRRLEAEQPELAAEFHRWLATALADRLSDTMRTFDALVDQT
Ga0299913_118248252	3300031229	Soil	RCSREQIERMEAEDPDVAAGLHRWLAGTIAYRLGDTMRTFDVLLD
Ga0247727_100652907	3300031576	Biofilm	IERLEAEEPELAAALHRWLATTLAERLTDTLGVVDALLE
Ga0307405_111666421	3300031731	Rhizosphere	EAGEPELAAALHRWFATTLAQRLTGATQAFDTLLD
Ga0310907_107860521	3300031847	Soil	ETPSVVMQLGRASIERIEATEPALAAALHRWLATTLSERLTETQRAVMALFD
Ga0310904_103403891	3300031854	Soil	RIEAEDPELAGALHRWLAGILSERLRDTLREFDALLE
Ga0214473_119350782	3300031949	Soil	EAEEPEMAAALHRWLARTLAERLSDTMKAFDALFD
Ga0310899_103836081	3300032017	Soil	CVVLGLSRSSIERLEAEEPETAAALHRWLATTLAVRLTDADRAYSASMD
Ga0315273_116492961	3300032516	Sediment	PSVVLVLSRDSLEHLEAEEPETAAALHRWLATTLSERLTDADRSISSLLD
Ga0316622_1006635252	3300033416	Soil	MEAEEPEVATALHRWLATTLADRLNETLRAADALLD
Ga0247830_100225004	3300033551	Soil	RRLETEQPEVAAEFHRWLATALADRLSDTMRTFDALVDQT
Ga0247830_100493541	3300033551	Soil	ERIAGLEATDPETAAALHRWLAGTLAGRLQDTMRTFDALID
Ga0364931_0019726_1764_1889	3300034176	Sediment	ASIEQIEAEEPDLAAALHRWLAGILSERLRDTLREFDALLD
Ga0370495_0141587_4_114	3300034257	Untreated Peat Soil	METAEPALAAALHRWLATTLSERLTDTQRAVGTLLD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign