Metagenome / Metatranscriptome Family F035939

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035939
Family Type	Metagenome / Metatranscriptome
Number of Sequences	171
Average Sequence Length	42 residues
Representative Sequence	VSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAPSKQ
Number of Associated Samples	146
Number of Associated Scaffolds	171

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.59 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	91.23 %
Associated GOLD sequencing projects	138
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.152 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.825 % of family members)
Environment Ontology (ENVO)	Unclassified (32.749 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.953 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 171 Family Scaffolds
PF07876	Dabb	8.77
PF11731	Cdd1	7.02
PF00450	Peptidase_S10	5.85
PF08447	PAS_3	5.26
PF00903	Glyoxalase	3.51
PF00989	PAS	1.75
PF03551	PadR	1.75
PF12681	Glyoxalase_2	1.75
PF01694	Rhomboid	1.17
PF13442	Cytochrome_CBB3	1.17
PF02687	FtsX	1.17
PF08448	PAS_4	1.17
PF13426	PAS_9	1.17
PF14321	DUF4382	1.17
PF01425	Amidase	0.58
PF12867	DinB_2	0.58
PF13537	GATase_7	0.58
PF13188	PAS_8	0.58
PF13669	Glyoxalase_4	0.58
PF01509	TruB_N	0.58
PF02786	CPSase_L_D2	0.58
PF01784	NIF3	0.58
PF11987	IF-2	0.58
PF15919	HicB_lk_antitox	0.58
PF01738	DLH	0.58
PF12680	SnoaL_2	0.58
PF01436	NHL	0.58
PF16198	TruB_C_2	0.58
PF04255	DUF433	0.58

COG ID	Name	Functional Category	% Frequency in 171 Family Scaffolds
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	5.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.75
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.75
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.75
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.17
COG0130	tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA	Translation, ribosomal structure and biogenesis [J]	0.58
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.58
COG0327	Putative GTP cyclohydrolase 1 type 2, NIF3 family	Coenzyme transport and metabolism [H]	0.58
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.58
COG3323	PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family	Function unknown [S]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.15 %
Unclassified	root	N/A	5.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.15 %
Unclassified	root	N/A	5.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.15 %
Unclassified	root	N/A	5.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.65 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.60 %
Unclassified	root	N/A	5.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.58 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.11 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7.02 %
Unclassified	root	N/A	5.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.58 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.85 %
Unclassified	root	N/A	5.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Unclassified	root	N/A	5.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1.17 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.58 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Unclassified	root	N/A	5.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.68 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.58 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Unclassified	root	N/A	5.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %
Granulicella paludicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella paludicola	1.17 %
Gemmatimonadetes bacterium 21-71-4	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1.17 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.58 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.58 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002910\|JGI25615J43890_1001428	All Organisms → cellular organisms → Bacteria	3235	Open in IMG/M
3300002917\|JGI25616J43925_10212858	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300004080\|Ga0062385_10075013	Not Available	1558	Open in IMG/M
3300004080\|Ga0062385_10653997	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300004092\|Ga0062389_102646418	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005167\|Ga0066672_10095208	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300005167\|Ga0066672_10847239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300005332\|Ga0066388_100402545	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300005332\|Ga0066388_100619654	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300005526\|Ga0073909_10057047	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300005542\|Ga0070732_10194443	All Organisms → cellular organisms → Bacteria → Acidobacteria	1212	Open in IMG/M
3300005560\|Ga0066670_10421527	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300005568\|Ga0066703_10128954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1509	Open in IMG/M
3300005591\|Ga0070761_10720699	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300005712\|Ga0070764_10980464	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300005712\|Ga0070764_11031228	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300006032\|Ga0066696_10596462	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300006050\|Ga0075028_100564657	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300006052\|Ga0075029_100935670	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300006059\|Ga0075017_100427937	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300006086\|Ga0075019_10173428	All Organisms → cellular organisms → Bacteria → Acidobacteria	1268	Open in IMG/M
3300006172\|Ga0075018_10322176	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300006176\|Ga0070765_100822353	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300006176\|Ga0070765_101137238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300006237\|Ga0097621_100291312	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300006755\|Ga0079222_10771170	Not Available	778	Open in IMG/M
3300006797\|Ga0066659_11577920	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300006806\|Ga0079220_10386201	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	907	Open in IMG/M
3300006881\|Ga0068865_100579133	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300006903\|Ga0075426_10655571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	786	Open in IMG/M
3300007255\|Ga0099791_10365778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300007258\|Ga0099793_10651958	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300007788\|Ga0099795_10488206	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300009012\|Ga0066710_104257042	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300009038\|Ga0099829_10130681	All Organisms → cellular organisms → Bacteria → Acidobacteria	1987	Open in IMG/M
3300009038\|Ga0099829_11052336	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300009038\|Ga0099829_11572749	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300009088\|Ga0099830_11051251	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300009089\|Ga0099828_10146295	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300009090\|Ga0099827_11168998	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300009545\|Ga0105237_11139379	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300009792\|Ga0126374_10859327	Not Available	699	Open in IMG/M
3300010046\|Ga0126384_10006566	All Organisms → cellular organisms → Bacteria	7120	Open in IMG/M
3300010048\|Ga0126373_10901293	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300010325\|Ga0134064_10098319	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300010335\|Ga0134063_10340817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300010360\|Ga0126372_10370988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1293	Open in IMG/M
3300010361\|Ga0126378_10535422	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300010361\|Ga0126378_11329518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	813	Open in IMG/M
3300010376\|Ga0126381_101610381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	938	Open in IMG/M
3300010858\|Ga0126345_1123018	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300011120\|Ga0150983_13450147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300011120\|Ga0150983_13727218	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300011269\|Ga0137392_10732434	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300011270\|Ga0137391_10521762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300011270\|Ga0137391_10802559	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300011270\|Ga0137391_11453125	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300011271\|Ga0137393_10342019	All Organisms → cellular organisms → Bacteria → Acidobacteria	1277	Open in IMG/M
3300011271\|Ga0137393_11420756	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300012096\|Ga0137389_10171154	All Organisms → cellular organisms → Bacteria → Acidobacteria	1792	Open in IMG/M
3300012169\|Ga0153990_1046465	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300012189\|Ga0137388_10376439	All Organisms → cellular organisms → Bacteria → Acidobacteria	1312	Open in IMG/M
3300012189\|Ga0137388_10803295	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300012200\|Ga0137382_10286836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300012203\|Ga0137399_10316491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1291	Open in IMG/M
3300012205\|Ga0137362_10608614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300012208\|Ga0137376_11232473	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300012211\|Ga0137377_10492384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300012285\|Ga0137370_10105752	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300012349\|Ga0137387_11142845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300012350\|Ga0137372_10825052	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012356\|Ga0137371_10537680	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300012359\|Ga0137385_11427990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300012362\|Ga0137361_10850129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300012362\|Ga0137361_11236159	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300012582\|Ga0137358_10598198	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012917\|Ga0137395_10134209	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300012922\|Ga0137394_10250143	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300012924\|Ga0137413_11543617	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300012925\|Ga0137419_10184276	All Organisms → cellular organisms → Bacteria → Acidobacteria	1534	Open in IMG/M
3300012927\|Ga0137416_11799366	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012927\|Ga0137416_12002352	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300012929\|Ga0137404_10805720	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	853	Open in IMG/M
3300012929\|Ga0137404_11369621	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300012929\|Ga0137404_11535772	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300012930\|Ga0137407_10487530	All Organisms → cellular organisms → Bacteria → Acidobacteria	1150	Open in IMG/M
3300012944\|Ga0137410_10228696	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300012961\|Ga0164302_11450432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	563	Open in IMG/M
3300012975\|Ga0134110_10535610	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300012977\|Ga0134087_10046735	All Organisms → cellular organisms → Bacteria → Acidobacteria	1695	Open in IMG/M
3300015052\|Ga0137411_1168211	All Organisms → cellular organisms → Bacteria	3641	Open in IMG/M
3300015245\|Ga0137409_11023303	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300015371\|Ga0132258_12795170	Not Available	1216	Open in IMG/M
3300015373\|Ga0132257_101291262	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300016294\|Ga0182041_12013721	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300016371\|Ga0182034_11669324	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300017823\|Ga0187818_10390879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300017947\|Ga0187785_10203535	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300020021\|Ga0193726_1354909	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300020199\|Ga0179592_10343159	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300020579\|Ga0210407_11064641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella paludicola	614	Open in IMG/M
3300020580\|Ga0210403_10509658	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300020580\|Ga0210403_10666898	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300020580\|Ga0210403_10907892	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300020580\|Ga0210403_11181961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella paludicola	590	Open in IMG/M
3300020581\|Ga0210399_10644250	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300020583\|Ga0210401_10401319	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300021086\|Ga0179596_10002530	All Organisms → cellular organisms → Bacteria → Proteobacteria	5050	Open in IMG/M
3300021168\|Ga0210406_10219199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1572	Open in IMG/M
3300021168\|Ga0210406_11022039	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300021171\|Ga0210405_10257679	All Organisms → cellular organisms → Bacteria → Acidobacteria	1380	Open in IMG/M
3300021171\|Ga0210405_10585972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300021178\|Ga0210408_10036621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3862	Open in IMG/M
3300021401\|Ga0210393_10690103	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300021402\|Ga0210385_10269862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1255	Open in IMG/M
3300021404\|Ga0210389_10889792	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300021420\|Ga0210394_10228967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1625	Open in IMG/M
3300021432\|Ga0210384_11295142	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300021476\|Ga0187846_10437158	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300021477\|Ga0210398_11155970	Not Available	613	Open in IMG/M
3300021478\|Ga0210402_10713180	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300021479\|Ga0210410_10578669	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300021560\|Ga0126371_11219892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300021560\|Ga0126371_13251809	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300024246\|Ga0247680_1033312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300024310\|Ga0247681_1042752	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300024330\|Ga0137417_1435638	All Organisms → cellular organisms → Bacteria → Acidobacteria	1982	Open in IMG/M
3300025906\|Ga0207699_10106902	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300025916\|Ga0207663_10292402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300026035\|Ga0207703_10042050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3663	Open in IMG/M
3300026095\|Ga0207676_11577523	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300026308\|Ga0209265_1057478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300026334\|Ga0209377_1248304	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300026496\|Ga0257157_1095619	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300026499\|Ga0257181_1035250	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300026547\|Ga0209156_10056587	All Organisms → cellular organisms → Bacteria	2060	Open in IMG/M
3300026547\|Ga0209156_10394238	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300026551\|Ga0209648_10426257	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300026552\|Ga0209577_10517020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	783	Open in IMG/M
3300026555\|Ga0179593_1243200	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300027050\|Ga0209325_1036296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	593	Open in IMG/M
3300027629\|Ga0209422_1048252	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300027643\|Ga0209076_1001633	All Organisms → cellular organisms → Bacteria → Proteobacteria	4652	Open in IMG/M
3300027701\|Ga0209447_10036391	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300027853\|Ga0209274_10074583	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300027855\|Ga0209693_10588792	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300027882\|Ga0209590_11071434	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300028536\|Ga0137415_10183701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1915	Open in IMG/M
3300029636\|Ga0222749_10728679	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300031057\|Ga0170834_100555443	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031057\|Ga0170834_105528433	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300031446\|Ga0170820_14618064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300031715\|Ga0307476_10300104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300031716\|Ga0310813_11256928	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300031718\|Ga0307474_10935639	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300031719\|Ga0306917_10651305	Not Available	828	Open in IMG/M
3300031720\|Ga0307469_10197857	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300031753\|Ga0307477_10660605	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300031777\|Ga0318543_10390959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300031782\|Ga0318552_10636915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300031846\|Ga0318512_10096468	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 21-71-4	1385	Open in IMG/M
3300031890\|Ga0306925_10092890	All Organisms → cellular organisms → Bacteria → Acidobacteria	3206	Open in IMG/M
3300031981\|Ga0318531_10538939	Not Available	529	Open in IMG/M
3300032052\|Ga0318506_10133167	Not Available	1081	Open in IMG/M
3300032174\|Ga0307470_10355855	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300032180\|Ga0307471_100660694	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300032205\|Ga0307472_100252255	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300032893\|Ga0335069_10017290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10052	Open in IMG/M
3300032955\|Ga0335076_10367041	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	5.85%
Plants	Host-Associated → Plants	4.68%
Fungi	Host-Associated → Fungi	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.30%
Freshwater	Environmental → Aquatic → Freshwater	2.92%
Sediment	Environmental → Aquatic → Sediment	2.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.17%
Cave	Environmental → Terrestrial → Cave	0.58%
Roots	Host-Associated → Plants → Roots	0.58%
Mycelium	Host-Associated → Fungi → Mycelium	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.19%
Loam	Environmental → Terrestrial → Soil → Loam	9.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.17%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.58%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.58%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.58%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.58%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.58%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.34%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.58%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.58%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.58%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.58%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25615J43890_10014281	3300002910	Grasslands Soil	VSTDNHFFAIRAVGKNGARSIAVPTEIERRPPPLPAGAKQ*
JGI25616J43925_102128581	3300002917	Grasslands Soil	VLKGVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPSPSKQ*
Ga0062385_100750132	3300004080	Bog Forest Soil	LKSVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPAQQAQPKS*
Ga0062385_106539971	3300004080	Bog Forest Soil	KDVSTDNHYFAVRSVGKNGARSLAVVSEAERRAPPLPTATPKQ*
Ga0062389_1026464182	3300004092	Bog Forest Soil	DVSTDNHYFAVRSVGKNGARSLAVVSEAERRAPPLPTATPKQ*
Ga0066672_100952082	3300005167	Soil	AVLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRAPPGPTRSSQ*
Ga0066672_108472392	3300005167	Soil	GVSTDNHFFAVRSVGKNGARSIAVPTEMERRPPPGPTRSNQ*
Ga0066388_1004025453	3300005332	Tropical Forest Soil	VLKGVSTDNHFFAVRSVGKNGARSIAVPTEIERRPPPLPSTPK*
Ga0066388_1006196542	3300005332	Tropical Forest Soil	KGVSTDNHFFALRAVGKNGARSIAVPTEMERRPPPGPTPAKQ*
Ga0073909_100570471	3300005526	Surface Soil	NHFFAVRSVGRNGARSIAVPTEMEKRPPPLPAKAKN*
Ga0070732_101944431	3300005542	Surface Soil	GETALKGVSTDNHFFAVRSVGKNGSRSIAVPTEMERRPPPLPSGTKQ*
Ga0066670_104215271	3300005560	Soil	STDNHFFAVRAVGKNGARSIAVPTELERRPPPLPTPAKQ*
Ga0066703_101289544	3300005568	Soil	STDNHFFAVRAVGKNAARSIAVPTEIERRPPPQPTPTK*
Ga0070761_107206992	3300005591	Soil	KDVSTDNHYFAVRSVGKNGARSLAVISEAERRAPPLPTTPKQ*
Ga0070764_109804642	3300005712	Soil	ILKDVSTDNHYFAVRSIGKNGARSIAVISEAERRAPPTPSNAPKQ*
Ga0070764_110312281	3300005712	Soil	GVSTDNHFFAVRSVGKNGARSIAVPTEMERRPIPGTTKK*
Ga0066696_105964622	3300006032	Soil	STDNHFFAVRAVGKNGARSIAVPTEMERRAPPLPTPSKQ*
Ga0075028_1005646572	3300006050	Watersheds	DNHFFAVRAVGKNGARSIAIPTEIERRQPPSPSKQ*
Ga0075029_1009356702	3300006052	Watersheds	STDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPTPTKQ*
Ga0075017_1004279372	3300006059	Watersheds	SVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPQPTPAKQ*
Ga0075019_101734281	3300006086	Watersheds	FFAVRAVGKNGARSIAVPTEMERRPPPQPTPAKQ*
Ga0075018_103221762	3300006172	Watersheds	TDNHFFAVRAVGKNGARSIAVPTEMERRPLPTPAKQ*
Ga0070765_1008223532	3300006176	Soil	GETVLNGVSTDNHFFAVRAVGKNGARSIAVPTDVERLPIPGTTRK*
Ga0070765_1011372383	3300006176	Soil	VLKDVSTDNHYFAVRSVGKNGARSIAVIAEAERRAPPLPSNAPKQ*
Ga0097621_1002913123	3300006237	Miscanthus Rhizosphere	ETVLKGVSTDNHFYAVRAVGKNGARSIAVPTEMERRGPPLPTK*
Ga0079222_107711702	3300006755	Agricultural Soil	AVRSVGKNGARSIAVVAEAERRAPPALPSNAPKQ*
Ga0066659_115779201	3300006797	Soil	TVLKGVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPSESKQ*
Ga0079220_103862012	3300006806	Agricultural Soil	GVSTDNHFFAVRSVGKNGARSIAVPTEMERRTPPGPTRSNQ*
Ga0068865_1005791331	3300006881	Miscanthus Rhizosphere	VSTDNHFFAVRSVGRNGARSIAIPTEIERRPPPLPAKAKQ*
Ga0075426_106555711	3300006903	Populus Rhizosphere	VSTDNHFFAVRSVGKNGARSIAVPTEMERRPPPGPTPAKQ*
Ga0099791_103657782	3300007255	Vadose Zone Soil	GETVLKGVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPQPAPAKQ*
Ga0099793_106519581	3300007258	Vadose Zone Soil	HFFAVRAVGKNGARSIAEPTEIERRPPPEPAPTKQ*
Ga0099795_104882061	3300007788	Vadose Zone Soil	GVSTDNHFFAVRSVGKNGARSIAVPTEMERRPPPTPTGKKQ*
Ga0066710_1042570421	3300009012	Grasslands Soil	HFFAVRAVGKNGARSIAVPTEMERRPPPLPTPSKQ
Ga0099829_101306814	3300009038	Vadose Zone Soil	GETVLKGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSAPKQ*
Ga0099829_110523361	3300009038	Vadose Zone Soil	TVLKNVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPSPSKQ*
Ga0099829_115727492	3300009038	Vadose Zone Soil	ETVLMGIYTDNHFYAVRAVGMNGARSIAVPTEIERRPLPLPAPTKQ*
Ga0099830_110512512	3300009088	Vadose Zone Soil	STDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPTPSKQ*
Ga0099828_101462951	3300009089	Vadose Zone Soil	TDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSAPKQ*
Ga0099827_111689981	3300009090	Vadose Zone Soil	PGETVLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRPPALPTGTKQ*
Ga0105237_111393792	3300009545	Corn Rhizosphere	DNHFFAVRSVGKNGARSIAVVTEMERRPIPGTQKK*
Ga0126374_108593271	3300009792	Tropical Forest Soil	AGETVLKGVSTDNHFFAVRSVGKTGARSIAVPTEIERRGPPAPAKSKE*
Ga0126384_100065667	3300010046	Tropical Forest Soil	LKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRAPPGPTPSNQ*
Ga0126373_109012931	3300010048	Tropical Forest Soil	TVLEAVSTDNHFFAVRSVGKTGARSLAVPTEIERRGPPAPAKSKE*
Ga0134064_100983191	3300010325	Grasslands Soil	GVSTDNHFFAVRAVGKNGARSIAVPTEMERRAPPLPTPSKQ*
Ga0134063_103408172	3300010335	Grasslands Soil	ILQGVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPAPSKP*
Ga0126372_103709881	3300010360	Tropical Forest Soil	GVSTDNHFFAVRSVGKNGARSIAVLTEMERRTPPGPTPAKQ*
Ga0126378_105354223	3300010361	Tropical Forest Soil	VSTDNHFFAVRSVGKNGARSIAVPSEMERRGPPLPTKAKE*
Ga0126378_113295181	3300010361	Tropical Forest Soil	NHFFAVRSVGKNGARSIAVPTEMERRTPPGPTPARQ*
Ga0126381_1016103812	3300010376	Tropical Forest Soil	VSTDNHFFAVRSVGKNGARSIAVLTEMERRTPPGPTPAKQ*
Ga0126345_11230181	3300010858	Boreal Forest Soil	AAGETVLKGVSTDNHFFAVRAVGKNGSRSIAVPTEMERRPPPLPAPSKQ*
Ga0150983_134501472	3300011120	Forest Soil	DNHFFAVRAVGKNGARSIAVPTEIERRPPPLSTPSKQ*
Ga0150983_137272181	3300011120	Forest Soil	TDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAGTKQ*
Ga0137392_107324342	3300011269	Vadose Zone Soil	HFFAVRAVGKNGARSIAVPTEIERRAPPLPSPSKQ*
Ga0137391_105217622	3300011270	Vadose Zone Soil	ETVLKNVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPSPSKQ*
Ga0137391_108025591	3300011270	Vadose Zone Soil	DNHFFAVRAVGKNGARSIAVPTEMERRPPPTPTGTKQ*
Ga0137391_114531251	3300011270	Vadose Zone Soil	VSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAPSKQ*
Ga0137393_103420192	3300011271	Vadose Zone Soil	TLLKGVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPSPSKQ*
Ga0137393_114207561	3300011271	Vadose Zone Soil	DNHFFAVRAVGKNGARSIAVPTEVERRPPPLPAGTKQ*
Ga0137389_101711541	3300012096	Vadose Zone Soil	ETVLRGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAGTKQ*
Ga0153990_10464652	3300012169	Attine Ant Fungus Gardens	HFFAVRSVGKNGARSIAVPTEMERRPPPLPAGTKQ*
Ga0137388_103764392	3300012189	Vadose Zone Soil	RGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAGIKQ*
Ga0137388_108032951	3300012189	Vadose Zone Soil	TVLHGVSTDNHFFAVRAVGKNGARSIAVPTEVERRPPPLPVGTKQ*
Ga0137382_102868363	3300012200	Vadose Zone Soil	ILKGVSTDNHFFAIRAAGKNGARSIAVPTEMERRSPPLPAASKQ*
Ga0137399_103164912	3300012203	Vadose Zone Soil	KGASTDNHFFAVRAVGKNGARSIAVPTEIERRPPPSASTK*
Ga0137362_106086141	3300012205	Vadose Zone Soil	TDNHFFAIRAAGKNGARSIAVPTEMERRSSPLPAASKQ*
Ga0137376_112324731	3300012208	Vadose Zone Soil	NHFFAIRAAGKNGARSIAVPTEMERRSPPLPAASKQ*
Ga0137377_104923841	3300012211	Vadose Zone Soil	DNHFFAIRAAGKNGARSIAVPTEMERRPPPLPAASKQ*
Ga0137370_101057523	3300012285	Vadose Zone Soil	STDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAASKQ*
Ga0137387_111428452	3300012349	Vadose Zone Soil	TDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPASPKQ*
Ga0137372_108250521	3300012350	Vadose Zone Soil	TVLKGVSTDNHFFAVRAVGKNGARSIAVATEIERRPSPMPTGTKQ*
Ga0137371_105376801	3300012356	Vadose Zone Soil	GVSTDNHFFAVRSVGKNGARSIAVPTEMERRPPPLPSGTKQ*
Ga0137385_114279902	3300012359	Vadose Zone Soil	KGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPASPKQ*
Ga0137361_108501292	3300012362	Vadose Zone Soil	VSTDNHFFAIRAAGKNGARSIAVPTEMERRPPLPASKQ*
Ga0137361_112361591	3300012362	Vadose Zone Soil	VSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPQPTPSKQ*
Ga0137358_105981983	3300012582	Vadose Zone Soil	TDNHFFAMRAVGKNGARSIAVATEIERHPPPTGTKQ*
Ga0137395_101342091	3300012917	Vadose Zone Soil	SGETVLQGVSTDNHFFAVRSVGKNGALSIAVPTEMKRRPQPLPSGTKQ*
Ga0137394_102501431	3300012922	Vadose Zone Soil	TVLKGVSTDNHFFAVRAVGRNGARSIAVPTEIERRPPPQPAPTKQ*
Ga0137413_115436171	3300012924	Vadose Zone Soil	VLKGVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPTPAKQ*
Ga0137419_101842763	3300012925	Vadose Zone Soil	ETVLNGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPTPGKQ*
Ga0137416_117993662	3300012927	Vadose Zone Soil	VSTDNHFFAVRSVGKNGARSIAVIAEAERRAPPLPTKQKQ*
Ga0137416_120023522	3300012927	Vadose Zone Soil	DNHFFAVRAVGKNGARSIAVPTEIERRAPPLPTPSKQ*
Ga0137404_108057203	3300012929	Vadose Zone Soil	LKGVSTDNHFFAVRAVGKNGARSIAVATEIERRPPPMPTGTKQ*
Ga0137404_113696212	3300012929	Vadose Zone Soil	STDNHFFAVRAVGKNGARSIAVVTEIERRPPPLPTKK*
Ga0137404_115357721	3300012929	Vadose Zone Soil	TVLKGVSTDNHFFAVRAVGKNGARTIAVPTEIERRPPPQPTPTK*
Ga0137407_104875302	3300012930	Vadose Zone Soil	DNHFFAVRAVGKNGARSIAVPTEMERRPPPQPTPSKQ*
Ga0137410_102286961	3300012944	Vadose Zone Soil	DVSTDNHFFAVRSVGKNGARSIATASQPQVRRAPPIDKK*
Ga0164302_114504323	3300012961	Soil	GQTVLKNVSTDNHFFAVRSVGRNGARSIAVVTEIERRPIPGAQNK*
Ga0134110_105356101	3300012975	Grasslands Soil	ETVLKGVSTDNHFFAVRAVGKNGARSIAVPTEMERRAPPLPTPSKQ*
Ga0134087_100467353	3300012977	Grasslands Soil	STDNHFFAVRAVGKNGARSIAVPTEMERRALPLPTPSKQ*
Ga0137411_11682116	3300015052	Vadose Zone Soil	GETVLKGVSTDNHFFAIRAAGKNGARSIAVPTEMERRRPPLPASKQ*
Ga0137409_110233031	3300015245	Vadose Zone Soil	ISTDNHFFAVRAVGKNGARSIAVPTEIERRAPPLPTPSKQ*
Ga0132258_127951703	3300015371	Arabidopsis Rhizosphere	GKTVLKNVSTDNHFFAVRSVGRNGARSIAVVTEIERRPIPGTQKK*
Ga0132257_1012912623	3300015373	Arabidopsis Rhizosphere	LKAVSTDNHFFAVRAVGRNGARSLAVPTEMERRGPPLPTATKQ*
Ga0182041_120137212	3300016294	Soil	STDNHFFAVRAVGKNGARSLAVPTEMERRAPPGPTPAKQ
Ga0182034_116693241	3300016371	Soil	RVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPTNK
Ga0187818_103908792	3300017823	Freshwater Sediment	STDNHFFAVRSVGKNGARSIAVPTEMERRPPPGPTATKQ
Ga0187785_102035351	3300017947	Tropical Peatland	ETILKGVSTDNHFFAVRALGKNGARSIAVPTEPGQRTTPSVVKK
Ga0193726_13549091	3300020021	Soil	HFFAVRSVGKNGARSIAVISEAERRAPPLPAKQKQ
Ga0179592_103431591	3300020199	Vadose Zone Soil	TVLKGVSTDNHFFAVRSVGKNGARSIAVPTEMEHRPIPGTKK
Ga0210407_110646411	3300020579	Soil	KGGATDNHFFAVRSVGKNGARSIAVIAEAERRAPPLPTAPKQ
Ga0210403_105096581	3300020580	Soil	ETVLKSISTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPTPAPTKQ
Ga0210403_106668981	3300020580	Soil	DNHFFAVRAVGKNGARSIAVPTEIERRPPPLPAATKQQ
Ga0210403_109078922	3300020580	Soil	TDNHFFAVRAVGKNGARSIAVVTEIERRPSPLPTKR
Ga0210403_111819612	3300020580	Soil	VSTDNHFFAVRSVGKNGARSIAVIAEAERRAPPLPTAPKQ
Ga0210399_106442503	3300020581	Soil	KGVSTDNHFFAVRAVGKNGARSIAVPTEMERRGPPLPAGTKQ
Ga0210401_104013193	3300020583	Soil	VLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRPIPGTTKK
Ga0179596_100025301	3300021086	Vadose Zone Soil	GEAVLKGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSAPKQ
Ga0210406_102191991	3300021168	Soil	HFFAVRAVGKNGARSIAVPTEMERRPPPLPAGTKQ
Ga0210406_110220392	3300021168	Soil	AGETVLHGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAGTKQ
Ga0210405_102576791	3300021171	Soil	RGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAGTKHQ
Ga0210405_105859721	3300021171	Soil	VLKGVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPVPAPSKQ
Ga0210408_100366215	3300021178	Soil	TVLHGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPAGTKQ
Ga0210393_106901033	3300021401	Soil	LLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRPIPGTTKK
Ga0210385_102698621	3300021402	Soil	VLKDVSTDNHFFAVRSVGKNGARSIAVISEAERRAPPTPTAPKQ
Ga0210389_108897921	3300021404	Soil	KGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSAPKQ
Ga0210394_102289675	3300021420	Soil	LKGVSTDNHFFAVRSVGKNGARSIAVIAEAERRAPPLPSNAPKQ
Ga0210384_112951422	3300021432	Soil	ETVLKSVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSQPKQ
Ga0187846_104371582	3300021476	Biofilm	NVSTDNHFFAVRSVGKNGARSIAVITEMQRRPPPLPANTPKQ
Ga0210398_111559702	3300021477	Soil	LNGVSTDNHFFAVRAVGKNGARSIAVPTDVERLPIPGTTRK
Ga0210402_107131801	3300021478	Soil	NGVSTDNHFFAVRAVGKNGARSIATASQPEVRRAPPIDKK
Ga0210410_105786691	3300021479	Soil	VSTDNHFFAVRSVGKNGARSIAVPTEMERRPIPGTTKK
Ga0126371_112198921	3300021560	Tropical Forest Soil	TDNHFFAVRAVGRNGARSIAVPTEIERRAPPGPTPAKQ
Ga0126371_132518092	3300021560	Tropical Forest Soil	STDNHFFAVRSVGKNGARSIAVPSEMERRGPPLPTKAKE
Ga0247680_10333122	3300024246	Soil	QTVLKNVSTDNHFFAVRSVGKNGARSIAVIAEAERRAPPLPSAPKQ
Ga0247681_10427521	3300024310	Soil	SVSTDNHFFAVRAVGKNGARSVAVPTEMERRGPPLPAGTKQ
Ga0137417_14356383	3300024330	Vadose Zone Soil	LKGVSTDNHFFAVRAVGKNGARSIAVPTEIERRTPPQPAPTKQ
Ga0207699_101069024	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ISTDNHYFAVRAVGKNGARSIAIPTEPLRRRPAPEKK
Ga0207663_102924021	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PGETVLRGVSTDNHFFAVRSVGKNGARSIAVPTEMERRPPPQPTPNKQ
Ga0207703_100420506	3300026035	Switchgrass Rhizosphere	STDNHFFAVRAVGKSGARSIAVPTEMERRGPPLPATPK
Ga0207676_115775232	3300026095	Switchgrass Rhizosphere	AAGQTVLKGVSTDNHFFAVRSVGKNGARSIAVVTEMERRPIPGTQKK
Ga0209265_10574781	3300026308	Soil	NHFFAVRSVGKNGARSIAVPTEMERRPPPGPTRSNQ
Ga0209377_12483042	3300026334	Soil	PGETILKGVSTDNHFFALRAVGKNGARSIAVPTELERRPPPLPTPAKQ
Ga0257157_10956191	3300026496	Soil	LKGVSTDNHFFAVRAVGKNGARSIAMPTEMERRPPPLPTSTK
Ga0257181_10352503	3300026499	Soil	VLKGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSGTKQ
Ga0209156_100565875	3300026547	Soil	GVSTDNHFFAVRAVGKNAARSIAVPTEIERRPPPQPTPTK
Ga0209156_103942381	3300026547	Soil	STDNHFFAVRAVGKSGARSIAIPTEIERRPPPLPSAPNQ
Ga0209648_104262571	3300026551	Grasslands Soil	TDNHFFAVRAVGKNGARSIAAPTEMERRPPPLPTGTKQ
Ga0209577_105170202	3300026552	Soil	NHFFAVRSVGKNGARSLAVPTEMERTGPPLPTPPKQ
Ga0179593_12432001	3300026555	Vadose Zone Soil	VAGETVLKGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSPSKQ
Ga0209325_10362962	3300027050	Forest Soil	AILQGVSTDNHFFAVRSVGKNGARSIAVPTEMERRTPPGPAKQ
Ga0209422_10482521	3300027629	Forest Soil	GETVLKGVSTDNHFFAVRSVGKNGARSIAAPTEMERRPPPLPAGAKQ
Ga0209076_10016331	3300027643	Vadose Zone Soil	LKNVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPSPSKQ
Ga0209447_100363913	3300027701	Bog Forest Soil	LKDVSTDNHYFAVRSVGKNGARSIAVISEAERRAPPTPTTPKQ
Ga0209274_100745834	3300027853	Soil	ETVLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRPVPGTTKK
Ga0209693_105887921	3300027855	Soil	VLKDVSTDNHFFAVRSVGKNGARSIAVISEAERRAPPLPSAPKQ
Ga0209590_110714342	3300027882	Vadose Zone Soil	TVLKGVSTDNHFFAVRAVDKNGARSIAAPTEMERRPPPLPTGTKQ
Ga0209624_105877931	3300027895	Forest Soil	STDNHFFAVRSVGKNGARSIAVPTEMERRPIPGTTKK
Ga0137415_101837011	3300028536	Vadose Zone Soil	KGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPLPSPSKQ
Ga0222749_107286791	3300029636	Soil	TDNHFFAVRSVGKNGARSIAVISEAERRAPPLPSAPKQ
Ga0170834_1005554432	3300031057	Forest Soil	GQTVLKGVSTDNHFFAVRAVGKNGARSIAVVTEIERRPPPLPTKK
Ga0170834_1055284331	3300031057	Forest Soil	TDNHFFAVRAVGKNGARSIAVVTEIERRPPPLPTKK
Ga0170820_146180642	3300031446	Forest Soil	SAWQTVLKGVSTDNHFFAVRAVGKNGARSIAVVTEIERRPPPMPTKK
Ga0307476_103001041	3300031715	Hardwood Forest Soil	TVLKGVSTDNHFFAVRSVGENGARSIAVPTEMERRPPPQPTPSKQ
Ga0310813_112569281	3300031716	Soil	VSTDNHFFAVRSVGKNGARSIAVIAEAERRAPPLPSAPKQ
Ga0307474_109356392	3300031718	Hardwood Forest Soil	RGVSTDNHFFAVRAVGKNGARSIAVPTEMERRPPPQPAGTKQ
Ga0306917_106513051	3300031719	Soil	NHFFAVRSVGKTGARSIAVPTEIEPRGPLAPAKSKQ
Ga0307469_101978571	3300031720	Hardwood Forest Soil	TDNHFFAVRAVGKNGARSIAVVTEIERRPPPMPTGTKQ
Ga0307477_106606051	3300031753	Hardwood Forest Soil	TDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPAATKQQ
Ga0318543_103909592	3300031777	Soil	AVLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRTPPGPTPTKQ
Ga0318552_106369152	3300031782	Soil	PGEAVLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRTPPGPTPAKQ
Ga0318512_100964682	3300031846	Soil	GEAVLKGVSTDNHFFAVRSVGKNGARSIAVPTEMERRTPPGPTPAKQ
Ga0306925_100928901	3300031890	Soil	ALPRVSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPTNK
Ga0307479_119038111	3300031962	Hardwood Forest Soil	LKGVSTDNHFFAVRSVGKNGARSIAIPASAPRTPPFPTSGQPAK
Ga0318531_105389391	3300031981	Soil	VLKGVSTDNHFFAVRSVGKTGARSIAVPTEIEPRGPLAPAKSKQ
Ga0318506_101331671	3300032052	Soil	VSTDNHFFAVRSVGKNGARSIAVPTEMERRTPPGPTPAKQ
Ga0307470_103558551	3300032174	Hardwood Forest Soil	KGVSTDNHFFAVRAVGKNGARSIAVVTEIERRPPPLPTKK
Ga0307471_1006606942	3300032180	Hardwood Forest Soil	VSTDNHFFAVRAVGKNGARSIAVPTEIERRPPPLPAGTKQ
Ga0307472_1002522552	3300032205	Hardwood Forest Soil	PGETVLKGVSTDNHFFAVRAAGKNGARSIAVPTEMERRPPPLPAGTKQ
Ga0335069_1001729011	3300032893	Soil	TDNHFFAVRSVGKNGARSIAVPTEMERRGPPGPAKAKQ
Ga0335076_103670414	3300032955	Soil	TDNHYFAVRSVGKNGARSIAVVAEAERRAPPTPTNAPKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035939

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences