Metagenome / Metatranscriptome Family F035869

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035869
Family Type	Metagenome / Metatranscriptome
Number of Sequences	171
Average Sequence Length	54 residues
Representative Sequence	MATTTLAATLNTPMSELRPAPMERILVIEDDPALRKILQRLFSSEGYEVDIV
Number of Associated Samples	136
Number of Associated Scaffolds	171

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.82 %
% of genes near scaffold ends (potentially truncated)	95.91 %
% of genes from short scaffolds (< 2000 bps)	86.55 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.152 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.807 % of family members)
Environment Ontology (ENVO)	Unclassified (33.918 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.988 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.25% β-sheet: 10.00% Coil/Unstructured: 68.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 171 Family Scaffolds
PF08281	Sigma70_r4_2	67.25
PF00486	Trans_reg_C	8.77
PF00072	Response_reg	4.09
PF13432	TPR_16	1.17
PF04542	Sigma70_r2	1.17
PF13473	Cupredoxin_1	0.58
PF14344	DUF4397	0.58
PF13231	PMT_2	0.58
PF13442	Cytochrome_CBB3	0.58
PF04773	FecR	0.58
PF12760	Zn_Tnp_IS1595	0.58
PF14559	TPR_19	0.58
PF02954	HTH_8	0.58
PF12762	DDE_Tnp_IS1595	0.58
PF07638	Sigma70_ECF	0.58
PF02518	HATPase_c	0.58

COG ID	Name	Functional Category	% Frequency in 171 Family Scaffolds
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.75
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.17
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.17
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.17

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.15 %
Unclassified	root	N/A	5.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.15 %
Unclassified	root	N/A	5.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.15 %
Unclassified	root	N/A	5.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.12 %
Unclassified	root	N/A	5.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.81 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.11 %
Unclassified	root	N/A	5.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Unclassified	root	N/A	5.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Unclassified	root	N/A	5.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	9.94 %
Unclassified	root	N/A	5.85 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	2.92 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.58 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.11 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	9.94 %
Unclassified	root	N/A	5.85 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	2.92 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.58 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_104217800	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300001131\|JGI12631J13338_1035095	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300001593\|JGI12635J15846_10176641	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300001867\|JGI12627J18819_10168850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300002245\|JGIcombinedJ26739_100294684	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300003505\|JGIcombinedJ51221_10263640	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300004267\|Ga0066396_10119786	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300004479\|Ga0062595_100804172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	775	Open in IMG/M
3300004631\|Ga0058899_11743362	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005104\|Ga0066818_1019600	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005332\|Ga0066388_106475530	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300005447\|Ga0066689_10210644	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300005539\|Ga0068853_100208047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1782	Open in IMG/M
3300005541\|Ga0070733_10090366	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300005541\|Ga0070733_10170525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1417	Open in IMG/M
3300005542\|Ga0070732_10044025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2568	Open in IMG/M
3300005548\|Ga0070665_102615503	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300005554\|Ga0066661_10683340	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300005560\|Ga0066670_10128423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300005568\|Ga0066703_10673655	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005569\|Ga0066705_10137132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1491	Open in IMG/M
3300005591\|Ga0070761_10403727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	834	Open in IMG/M
3300005610\|Ga0070763_10536710	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005610\|Ga0070763_10946727	Not Available	514	Open in IMG/M
3300005618\|Ga0068864_102475853	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005712\|Ga0070764_10898718	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300005921\|Ga0070766_10068711	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300005921\|Ga0070766_10564496	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300006028\|Ga0070717_11131462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300006046\|Ga0066652_101677791	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300006052\|Ga0075029_101021331	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006059\|Ga0075017_100036790	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300006162\|Ga0075030_100000187	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	49719	Open in IMG/M
3300006175\|Ga0070712_101282011	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300006176\|Ga0070765_100188482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1865	Open in IMG/M
3300006176\|Ga0070765_100276102	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300006176\|Ga0070765_101305407	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300006791\|Ga0066653_10340637	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300009162\|Ga0075423_11422896	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300009523\|Ga0116221_1190740	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300009635\|Ga0116117_1177276	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300010325\|Ga0134064_10088658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1003	Open in IMG/M
3300010359\|Ga0126376_11338094	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300010880\|Ga0126350_11588940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	696	Open in IMG/M
3300012200\|Ga0137382_10213976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1327	Open in IMG/M
3300012207\|Ga0137381_11628188	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300012971\|Ga0126369_10428806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1366	Open in IMG/M
3300014169\|Ga0181531_10121282	All Organisms → cellular organisms → Bacteria → Acidobacteria	1571	Open in IMG/M
3300015374\|Ga0132255_102788719	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300017940\|Ga0187853_10353088	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300018009\|Ga0187884_10072145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1554	Open in IMG/M
3300018013\|Ga0187873_1130104	All Organisms → cellular organisms → Bacteria → Acidobacteria	973	Open in IMG/M
3300018034\|Ga0187863_10056079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2244	Open in IMG/M
3300018034\|Ga0187863_10167441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1225	Open in IMG/M
3300018034\|Ga0187863_10673906	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300018042\|Ga0187871_10026748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3648	Open in IMG/M
3300018042\|Ga0187871_10788109	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300018043\|Ga0187887_10208257	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300018044\|Ga0187890_10050744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2471	Open in IMG/M
3300018044\|Ga0187890_10113282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1571	Open in IMG/M
3300018468\|Ga0066662_10267072	All Organisms → cellular organisms → Bacteria → Acidobacteria	1411	Open in IMG/M
3300018468\|Ga0066662_11768841	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300019882\|Ga0193713_1052740	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300020579\|Ga0210407_11001521	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300020579\|Ga0210407_11018625	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300020581\|Ga0210399_10164249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1839	Open in IMG/M
3300020581\|Ga0210399_11263320	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300020583\|Ga0210401_10905803	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300020583\|Ga0210401_11449722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300021088\|Ga0210404_10594242	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300021168\|Ga0210406_11151790	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300021171\|Ga0210405_10295235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1281	Open in IMG/M
3300021171\|Ga0210405_10702606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	781	Open in IMG/M
3300021171\|Ga0210405_11145161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300021181\|Ga0210388_10300258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1410	Open in IMG/M
3300021181\|Ga0210388_10759425	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300021401\|Ga0210393_10970273	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300021401\|Ga0210393_11042780	Not Available	661	Open in IMG/M
3300021403\|Ga0210397_10312716	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300021403\|Ga0210397_10340888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1109	Open in IMG/M
3300021403\|Ga0210397_11080107	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300021404\|Ga0210389_10328373	All Organisms → cellular organisms → Bacteria → Acidobacteria	1200	Open in IMG/M
3300021405\|Ga0210387_11358993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	612	Open in IMG/M
3300021405\|Ga0210387_11626315	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300021407\|Ga0210383_10051029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3447	Open in IMG/M
3300021407\|Ga0210383_10605671	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300021420\|Ga0210394_10235939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300021420\|Ga0210394_11148907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300021432\|Ga0210384_11217223	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300021433\|Ga0210391_10489611	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300021444\|Ga0213878_10068308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1410	Open in IMG/M
3300021477\|Ga0210398_11486377	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300021479\|Ga0210410_10082520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2826	Open in IMG/M
3300021559\|Ga0210409_10176927	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1949	Open in IMG/M
3300021559\|Ga0210409_10204629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1797	Open in IMG/M
3300021559\|Ga0210409_10721717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300021559\|Ga0210409_10880774	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300022557\|Ga0212123_10757751	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300022557\|Ga0212123_10853104	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300022720\|Ga0242672_1087385	Not Available	591	Open in IMG/M
3300022881\|Ga0224545_1028194	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300024271\|Ga0224564_1062416	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300025320\|Ga0209171_10234485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300025444\|Ga0208189_1020906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1404	Open in IMG/M
3300025914\|Ga0207671_10557344	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300025916\|Ga0207663_10504514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300026041\|Ga0207639_10805874	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300026523\|Ga0209808_1017547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	3580	Open in IMG/M
3300026528\|Ga0209378_1019983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	3754	Open in IMG/M
3300026551\|Ga0209648_10210352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1475	Open in IMG/M
3300027065\|Ga0208489_1008106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	628	Open in IMG/M
3300027069\|Ga0208859_1033203	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300027401\|Ga0208637_1019739	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300027527\|Ga0209684_1020508	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300027537\|Ga0209419_1082699	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300027591\|Ga0209733_1033363	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300027604\|Ga0208324_1185839	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300027676\|Ga0209333_1093735	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300027745\|Ga0209908_10235717	Not Available	512	Open in IMG/M
3300027842\|Ga0209580_10203387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300027855\|Ga0209693_10302531	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300027867\|Ga0209167_10065285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1811	Open in IMG/M
3300027869\|Ga0209579_10704492	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300027884\|Ga0209275_10280237	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300027884\|Ga0209275_10450224	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300027889\|Ga0209380_10029512	All Organisms → cellular organisms → Bacteria → Acidobacteria	3093	Open in IMG/M
3300027895\|Ga0209624_10615583	Not Available	720	Open in IMG/M
3300027895\|Ga0209624_10630342	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300027898\|Ga0209067_10071420	All Organisms → cellular organisms → Bacteria → Acidobacteria	1780	Open in IMG/M
3300027905\|Ga0209415_10029249	All Organisms → cellular organisms → Bacteria	8020	Open in IMG/M
3300027911\|Ga0209698_11151934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300027986\|Ga0209168_10449415	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300028017\|Ga0265356_1015980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300028020\|Ga0265351_1025533	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300028906\|Ga0308309_10910215	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300029701\|Ga0222748_1095341	Not Available	573	Open in IMG/M
3300029903\|Ga0247271_101909	All Organisms → cellular organisms → Bacteria → Acidobacteria	4977	Open in IMG/M
3300029945\|Ga0311330_10043414	All Organisms → cellular organisms → Bacteria → Acidobacteria	4948	Open in IMG/M
3300029953\|Ga0311343_10297218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1570	Open in IMG/M
3300029954\|Ga0311331_10116744	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300029999\|Ga0311339_11063322	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300030007\|Ga0311338_11886529	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300030503\|Ga0311370_10359999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1849	Open in IMG/M
3300030593\|Ga0210263_1184847	Not Available	535	Open in IMG/M
3300030737\|Ga0302310_10068774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2254	Open in IMG/M
3300030738\|Ga0265462_12564722	Not Available	509	Open in IMG/M
3300030746\|Ga0302312_10104700	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300031028\|Ga0302180_10099174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1671	Open in IMG/M
3300031231\|Ga0170824_102254038	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300031446\|Ga0170820_13365874	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300031525\|Ga0302326_12009893	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300031708\|Ga0310686_100274491	Not Available	706	Open in IMG/M
3300031708\|Ga0310686_104485812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3543	Open in IMG/M
3300031708\|Ga0310686_118227211	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300031715\|Ga0307476_10051612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2804	Open in IMG/M
3300031715\|Ga0307476_10604226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031754\|Ga0307475_10012710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5670	Open in IMG/M
3300031823\|Ga0307478_10075450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2560	Open in IMG/M
3300031823\|Ga0307478_10786606	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300031823\|Ga0307478_11104818	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300031942\|Ga0310916_10670931	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300031962\|Ga0307479_11007714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300031962\|Ga0307479_11018036	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300032039\|Ga0318559_10494223	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300032160\|Ga0311301_12701298	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300032174\|Ga0307470_10524658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300032180\|Ga0307471_101778390	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300032180\|Ga0307471_103738269	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300033412\|Ga0310810_10224744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2093	Open in IMG/M
3300034163\|Ga0370515_0201705	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.87%
Aquatic	Environmental → Aquatic	12.87%
Plants	Host-Associated → Plants	5.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.44%
Freshwater	Environmental → Aquatic → Freshwater	8.19%
Peat	Environmental → Terrestrial → Peat	6.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.34%
Sediment	Environmental → Aquatic → Sediment	2.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.97%
Loam	Environmental → Terrestrial → Soil → Loam	19.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.58%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.09%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.09%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.09%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.34%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.58%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.58%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.58%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.58%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.58%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.58%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005104	Soil and rhizosphere microbial communities from Laval, Canada - mgHAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027065	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030593	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE024SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1042178003	3300000955	Soil	MATTTLAATFAAPLSALRPATINQILVIAENSTLRKGLQR
JGI12631J13338_10350952	3300001131	Forest Soil	MATATLTATLNTPISALRPATIDRILVIEEDAALRKILQRLFLSEGYEVDVVPDA
JGI12635J15846_101766413	3300001593	Forest Soil	MATASLAATLNTPISELQPVPRNRILVIEDNGALRKILRRLFSSVGYEVDVVPDA
JGI12627J18819_101688502	3300001867	Forest Soil	MATATLSATLNTPISMRLXTMGRILVIXDDSALRKVLRRLFSSEGYEVDVASDAVCGLERLRQGTP
JGIcombinedJ26739_1002946841	3300002245	Forest Soil	MRCESIGNPAERGKLMAATPLAATLNNPMSELRSAPMERILVIEHDGPLRRILQRLFSSEGYVVDVVPDAVCGLERLRQGLPA
JGIcombinedJ51221_102636401	3300003505	Forest Soil	MATTTLAATLNTPMSELRPAPTERILVIEDDPALRKILRRLFSSEGYEVDIVPDARAG
Ga0066396_101197861	3300004267	Tropical Forest Soil	MATTTLAATLNTPLCELRPATMDRILVIADDSSLRKALQRLFSLEGYEVEVVTDSI
Ga0062595_1008041722	3300004479	Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRRFSLERYEVEVVT
Ga0058899_117433622	3300004631	Forest Soil	MATTTLAATLNTPMSELRPAPMERILVIEDDPALRKILGRLFSSEGYEVD
Ga0066818_10196002	3300005104	Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLFSLERYEVEVVTD
Ga0066388_1064755302	3300005332	Tropical Forest Soil	MATTTLAATLNTPLSDLRPATMDRILVIADDSSLRKALQRL
Ga0066689_102106441	3300005447	Soil	MATTTLAATLNTPLSELRPATMNRILVIADDSALRKALQRLFSLEGYEVEVVTDSIAALARLRER
Ga0068853_1002080471	3300005539	Corn Rhizosphere	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLFSLER
Ga0070733_100903663	3300005541	Surface Soil	MATVTFAAPLNTPMSQPRLATVDRILVIEDDEPLRKILQRLLSSEGYEVDAVP
Ga0070733_101705254	3300005541	Surface Soil	MASTMLAATFDTPVSELRPATIDRITVVERDHALQK
Ga0070732_100440254	3300005542	Surface Soil	MATASLSATLNTPVSGLRPGPMGRILVIEDDSALRKVLRRLFSS
Ga0070665_1026155031	3300005548	Switchgrass Rhizosphere	MATTTLAATLNTPPSELRPATMDRILVIADDSALRKALQRLFSLERYEVEVVTDSVTGLARLRERSF
Ga0066661_106833402	3300005554	Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLFSLE
Ga0066670_101284231	3300005560	Soil	MASTTLAPTLNTPLSDLRPATMDRILVIADDSALRDALRRLFSL
Ga0066703_106736551	3300005568	Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLFSLEGYEVEVVTDSIA
Ga0066705_101371321	3300005569	Soil	MATTTLAATLNTPLSELRPATMNRILVIADDSALRKALQRLFSLEGYEVEVVTDSIAGLARL
Ga0070761_104037271	3300005591	Soil	MAATALAATLSIPTPELRSPSVEQILIIEHDVALRKVLQRLFSSEGYAVDVVPDAVCGLERLQQQAP
Ga0070763_105367101	3300005610	Soil	MATATLAATLNTPISELRSGTVDRILVIEDDDALRKVLRRLFSSEGY
Ga0070763_109467271	3300005610	Soil	MATATVAASLNTPIPELRPAVMERILVVEDDGALRKILRRLFSSE
Ga0068864_1024758531	3300005618	Switchgrass Rhizosphere	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLFSLERYEVEVVTDSVTGLARLRER
Ga0070764_108987181	3300005712	Soil	MATVTFAAPLNTPMSQPRLATVDRILVIEDDEPLRKILQRLLSS
Ga0070766_100687115	3300005921	Soil	MATITLAAPLNTPMSELRAAPMERILVIEDDAALRKILRRLFSSEGYEVD
Ga0070766_105644962	3300005921	Soil	MATATLAATSNIPISDLRPATMDRILIIEDDGALRTMLRRLFSSEGYEVD
Ga0070717_111314621	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATATLSATLNIPISGLRLAPTGRILVIEDDRALRKVLRRLFSSEGYAVDIAPDAVCGLERLRQGTA
Ga0066652_1016777912	3300006046	Soil	MATTTLAATLNTPLSELRPATMNRILVIADDSALRKA
Ga0075029_1010213312	3300006052	Watersheds	MATATLEVTLNTPLSELRPVTTDRILVIEDDAALRRILRRLFSAEGYE
Ga0075017_1000367901	3300006059	Watersheds	MATATLEITLNTPISELRPVTTDRILVIEDDAALRRILRRLFSAEGYEVDVVPDIV
Ga0075030_1000001871	3300006162	Watersheds	MATATLEITLNTPISELRPVTTDRILVIEDDAALRRILRRLFSAEGYEVDVVPDIVRGLE
Ga0070712_1012820112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MATGTSAATLNTSISEPRPAAVDRILVIEGDDALRKVL
Ga0070765_1001884821	3300006176	Soil	MATATLTATLNTPISEPLPAKMDRILVIEDDDALRKVLRRLFSSEGYEVDVVPDGMAG
Ga0070765_1002761021	3300006176	Soil	MATATLAATLNTPISELRSGTVDRILVIEDDDALRKILRRLFSSEGHQVDVVADGMAGL
Ga0070765_1013054071	3300006176	Soil	MATATLATTLNSPMPEPRPAPMERILVIEDDPALRKIL
Ga0066653_103406371	3300006791	Soil	MATTTLAAALNTPLSELRPATMDRILVFADDSVLRKSFE
Ga0075423_114228962	3300009162	Populus Rhizosphere	MATTTLAATLNTPLSELRSATMDRILVIADDSALRKALLRVFSLEGYGVEVVPDSVAGLE
Ga0116221_11907403	3300009523	Peatlands Soil	MATATLAANLNTPMSELRAAPVKRILVIEADAALRKILRRLFSSEG
Ga0116117_11772762	3300009635	Peatland	MAATLAGTLNPPISELRSAATERILVIEHDSALRKILERLLCSAGYVVDVAPDAVCGLER
Ga0134064_100886581	3300010325	Grasslands Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKAVQRLFS
Ga0126376_113380941	3300010359	Tropical Forest Soil	MATTTLAATLNTPLSEHQPATMDRILVIADDSALRKVLHRLFSLEGYEVEVVTDSIAGLA
Ga0126350_115889402	3300010880	Boreal Forest Soil	MASITLAATLNTPMSELRPATIDRILVIEHDRALQKILRRLFSSEG
Ga0137382_102139761	3300012200	Vadose Zone Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALLRLFSLEG
Ga0137381_116281881	3300012207	Vadose Zone Soil	MATTTLAATLNTPLSELRPAIMDRILVIADDGALRKALQRVLSLEGYGVEIVPD
Ga0126369_104288061	3300012971	Tropical Forest Soil	MATATLSATLNSPILGLRLAPLGRILVIEDDSALRKLLRRLFSSEGYEVDVAPDAV
Ga0181531_101212824	3300014169	Bog	MAATPLAATSSISTAKLRSGSSERILVIEHDDALRKVLQWLFSSEEYEVDVAFDAVCGLGETSPRSAS
Ga0132255_1027887191	3300015374	Arabidopsis Rhizosphere	MATTTLAATLNTPLSELRSATMDRILVIADDSALRKALQRLFSLERYEVEVVTD
Ga0187853_103530881	3300017940	Peatland	MATATLAATLNTPISEMRPATMDRILIIEDDGALRKILQRLFCSEGYE
Ga0187884_100721453	3300018009	Peatland	MAATTLAATLSIPAPELRSPSVEQILIIEHDVALRKILQRLFSSEGYAVEVVPDAVCGL
Ga0187873_11301041	3300018013	Peatland	MATATLSATLNPPMSELRLPPIERILIIEDDGALRTILRRLFSSEG
Ga0187863_100560793	3300018034	Peatland	MATATVSATLNIPIAERLSGLDRILVIEGDSALRKVLRQLFSSEGMR
Ga0187863_101674413	3300018034	Peatland	MATATLSATLNPPMSELRLPPIERILIIEDDGALRTILRRLFSSEGYEVEVVPDSVCGLQRLRQRAPA
Ga0187863_106739061	3300018034	Peatland	MGTVTLAAPLNTPMSEPRLATVDRILVIEDDKPLRKILQ
Ga0187871_100267485	3300018042	Peatland	MATATLSATLNPPMSELRLPPIERILIIEDDGALRTILRRLFSSEGYEVEVVPDSVCGLQRLRQRA
Ga0187871_107881091	3300018042	Peatland	MATATLAATVNTPIPELRAAPMERILVIEDDGALRKILRRLFSSEGYEVEVVPDAVV
Ga0187887_102082571	3300018043	Peatland	MATATLAATVNTPIPELRAAPMERILVIEDDGALRKILRRL
Ga0187890_100507441	3300018044	Peatland	MAATTLAATLSIPAPELRSPSVEQILIIEHDVALRKILQRLFSSEGYA
Ga0187890_101132823	3300018044	Peatland	MATVTFAAPLNTPMSQPRLATVDRILVIEDDEPLRKILQRLLSSEGYEVDVVPDGVSAVE
Ga0066662_102670724	3300018468	Grasslands Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRIFSLERYEVEVVTDSVNGLARLRERPFSAVILD
Ga0066662_117688411	3300018468	Grasslands Soil	MASTTLAPTLNTPLSDLRPATMDRILVIADDSALRDALHRLFSLERYEVEVVTDSVTGLARLSERPFSAVILE
Ga0193713_10527402	3300019882	Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLFSLERYEVEVVTDSVTGLARLR
Ga0210407_110015211	3300020579	Soil	MVAATLAGTLNTPISELQPHPTERILVIEHDGALRKILRRLFSSEGYEVDIVSDAVCAMERL
Ga0210407_110186252	3300020579	Soil	METATVAVTLTTPISELRPATMDRILVIEDDRALRKILRQLFSSEGYEVDVVPDVIGGLEMLRQRVPAAV
Ga0210399_101642493	3300020581	Soil	MATATLAATLNIPTSDLRPATMDRILIIEEDGALRKILRRLFSSEGYE
Ga0210399_112633201	3300020581	Soil	MATATLAATLNTPISEMRPVPVDRILVIEDDYALRTALRRLFSSEGYQVDVVSDGIAGLEMLHQKP
Ga0210401_109058031	3300020583	Soil	MATATLSATLNTPMSGLRLTPMGRILVIEDDVALRKVLRRLFLTEGYEVDVASDAVCGLERL
Ga0210401_114497222	3300020583	Soil	MATAILSATLNTPIPGLRLAPMGRILVIEDDSALRKVLRRVFSSEGYAVDIAPDAVCGLERLRQG
Ga0210404_105942422	3300021088	Soil	MAATTLAATLSIPTPELRSPSVEQILIIEHDVALRKVLQRLFSSEGYAV
Ga0210406_111517901	3300021168	Soil	MATATSAATLSTPISELRPARMERILVIEDDGASRKILRRLFSSEGYEVDV
Ga0210405_102952353	3300021171	Soil	MATATLAATLNTPISELRPATVDRILVIEDDDALRKVLRRLFSSEGYQVDVVSDGMA
Ga0210405_107026061	3300021171	Soil	MATTTLAATLNTPMSELRPAPMERILVIEDDPALRKILQRLFSSEGYEVDI
Ga0210405_111451612	3300021171	Soil	MATATLAATLNTPISELRPALVERILVIEADGALRKILRQLFSSEGYEVDVVPDGVGGLEMLRQRAPAAV
Ga0210388_103002583	3300021181	Soil	MAATSVAATLTTPMSELRPAPMERILVIEHDVALRKILRRLLSSEGYEVEVVPNGVA
Ga0210388_107594252	3300021181	Soil	MATATLAATLNTPISEMRPVPVDRILVIEDDYALRTALRRLFSSEGYQVDVVSDGIAGLEML
Ga0210393_109702732	3300021401	Soil	MAATTLAPTLNAPISKVRSSPMERILAVEDEGALRKILKGLFPSEG
Ga0210393_110427802	3300021401	Soil	MATATLSASWTAPLSEHRLTAMERILVIDDDGASRKMLRQ
Ga0210397_103127163	3300021403	Soil	MATATLAATLNTPISELRSGTVDRILVIEDDDALRKVLRRLFSSEGYQVDVVSG
Ga0210397_103408883	3300021403	Soil	MATTTLAATLNTPMSELRPAPTERILVIEDDPALRKILRRLFSSEGYEVDI
Ga0210397_110801072	3300021403	Soil	MATATLAATLDSPIPELRLAAADRIFVIEEDEALRKILRRLFSAE
Ga0210389_103283731	3300021404	Soil	MATATLAATLDSPIPELRLAAADRIFVIEEDEALRKI
Ga0210387_113589931	3300021405	Soil	MATTTLAATLNTPMSELRPAPMERILVIEDDPALRKILQRLFSSEGYEVDIVPDSHAGL
Ga0210387_116263152	3300021405	Soil	MAATTLAATSNAPISELQSAPTERILVIEHDGALRKVLHRLFSSEGYEVDVVSDAVCGLERL
Ga0210383_100510291	3300021407	Soil	MATTTLAATLNTPMSELRPAPMERILVIEDDPALRKILQRLFSSEGYEVDIV
Ga0210383_106056712	3300021407	Soil	MAATTLAATLNAPISELGLAPMERILVVEDDGALRKILQRLFSLEGYEVDVVQEGAD
Ga0210394_102359393	3300021420	Soil	MATATLAVTLTTPISELRPATMDRILVIEDDRALRKILRQLFSSEGYEVDVVPDVVGGLEKL
Ga0210394_111489072	3300021420	Soil	MATATLSATLNTPISAVRLAPLGRILVIEDDSALRKVLR
Ga0210384_112172231	3300021432	Soil	MAATTLAATLNSPISELRSAPMERILVIEHDGPLRKILQRLFSSEGYVVDVVPDAVC
Ga0210391_104896111	3300021433	Soil	MATATVAASLNTPIPELRPAVMERILVVEDDGALRKILRRLFSSEGYEV
Ga0213878_100683081	3300021444	Bulk Soil	MTTATLSIPIPELLQATSDRVLVIAHDGALRKILQRLFSTEGYEV
Ga0210398_114863772	3300021477	Soil	MATVILAPPVNTPMPEPRLAAVDRILVIEDDEALRKILHRLLSSEGYEVDVVR
Ga0210410_100825201	3300021479	Soil	MATATLSATLDRPISELRLPPMERILIIEEDGALRTILRRLF
Ga0210409_101769271	3300021559	Soil	MATTTLAATLNTPMSELRPAPMERILVIEDDPALRKILQRLFS
Ga0210409_102046293	3300021559	Soil	MATATLTATLNTPISEPQPAKMDRILVIEDDDALRKVLRRLLSSE
Ga0210409_107217171	3300021559	Soil	MATATLAATLNAPISELRPAPMERILVIEDDRALRKTLGRLFSSEGYEVDMVPDAVCGL
Ga0210409_108807742	3300021559	Soil	MATATLAATLNTPISELRPAAVDRILVIEDDYALRTALRRLFSSEGYQVDVVSDGIAGLEMLHQKPPS
Ga0212123_107577512	3300022557	Iron-Sulfur Acid Spring	MATATLDSSIPELRLAAADRILVIEEDEALRKILRRLFSAE
Ga0212123_108531041	3300022557	Iron-Sulfur Acid Spring	MAATTLAATSNTPISELRSGPMERILVMEHDGALRKVLQRLFSSEGYEVDVAFDAACAL
Ga0242672_10873851	3300022720	Soil	MAATPLAATLNNPMSELRSAPMERILVIEHDGPLRRILQRLFSSEGYVVDVVPDAVCGLERLRQGLPAAVI
Ga0224545_10281942	3300022881	Soil	MATATLAATLDSPMPELRLAAADRILVIEEDEALRKILRRLFSAEGYEVDAV
Ga0224564_10624161	3300024271	Soil	MAATTLAATLNTPISELQSPTQRILVIEHDGALRKILRRLFSSEGYEV
Ga0209171_102344851	3300025320	Iron-Sulfur Acid Spring	MAATTLAATLTAPMSELRPPAPMERILVIEHDVALRKILRRLLSSEGYDVEVVPNGVA
Ga0208189_10209063	3300025444	Peatland	MATATLAATLNAPISEMRPATMDRILVIEDDGALREILRRLFSSEGYEVDVVPDGIACLEML
Ga0207671_105573441	3300025914	Corn Rhizosphere	MATTTLAATLNTPLSELRPATMDQILVIADDSGLRKALQRLFSLERYEVEVVTDS
Ga0207663_105045141	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MATATLSATLNTPIPGLRLAPMGRILVIEYDSALRKVLRRLFSSEGYAVDIAPDAVCGLERLRQGTAAAVV
Ga0207658_110353052	3300025986	Switchgrass Rhizosphere	EEELMGTTTLAATLNTPMSELRPATMDRILIIEDDSALRKIL
Ga0207639_108058742	3300026041	Corn Rhizosphere	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLFSLERYE
Ga0209808_10175471	3300026523	Soil	MATTTLASTLNTPLSELRPATMDRILVIADDSALRKALQRFFSLEGYEVEVVTDSIAGLARLRERPF
Ga0209378_10199831	3300026528	Soil	MATTTLASTLNTPLSELRPATMDRILVIADDSALRKALQRFFSLEGYEVEVVTDSIAGLARLRERP
Ga0209648_102103521	3300026551	Grasslands Soil	VNRAAILEKEEELMGTTTLAATLNTPMSELRPAKMDRLLVIEDDSALRKILQRLFSSEGYEVEVVPDSVA
Ga0208489_10081061	3300027065	Forest Soil	MATTTLAATLNTPISDLRPALVERILVIEADGALRKILRQLFSSEGYEVDVVPDGVGG
Ga0208859_10332031	3300027069	Forest Soil	MATATLTATLNTPISEPQPAKMDRILVIEDDDALRKVLR
Ga0208637_10197391	3300027401	Soil	MATTTLAATLNTPLSELRPATMDRILVIADDSALRKALQRLF
Ga0209684_10205083	3300027527	Tropical Forest Soil	MATTTLAATLNTPLSEHRPATMDRILVIADDSALRKVLHRLFSLEGYEVEVVTDSIAG
Ga0209419_10826991	3300027537	Forest Soil	MAATSLAATSSIPTSQLQSAPMERILVIEHDGALRKVLQQLFSSEGYEVDVAFDAVCGLE
Ga0209733_10333633	3300027591	Forest Soil	MATATLSATLNTPISELRLAPMERILVIEDDGALRKILRRLFSSE
Ga0208324_11858392	3300027604	Peatlands Soil	MATATLAATLNTPISEMRPATMDRILVIEDDGALREILRRLFSSEGYEVDVVPDAVR
Ga0209333_10937351	3300027676	Forest Soil	MAATTLAAILNTPISKLRSAPMDRILAVEDDGVLQKILKGLFSSEGHEVDAAPD
Ga0209908_102357171	3300027745	Thawing Permafrost	MASITLAATLNTPMSEVPPATMERILVIEHDRALQKILQRLFSSEGYEVDVVPGSVAGLETVSYTHLDVYK
Ga0209580_102033873	3300027842	Surface Soil	MATTTLSATLNTPISMRLGPMGRILVIEDDSALRKVLRRLFSSEGYEVDVASDAVCALERLRRGTPA
Ga0209693_103025311	3300027855	Soil	MATATLSATLNPPISDLRLPPMERILIIEDDGALRTILRRLFSSEGYEVEVVSDSACGLQKLHQRAP
Ga0209167_100652851	3300027867	Surface Soil	MATVTFAAPLNTPMSQPRLATVDRILVIEDDEPLRKILQRLLSSEGYE
Ga0209579_107044922	3300027869	Surface Soil	MANSTLAAARLNTHMSDPQPATMDRILVIEGDDALRKILLRTFSSEGYEVDV
Ga0209275_102802371	3300027884	Soil	MGTVTLAAPLNTPMSEPRLATVDRILVIEDDKPLRKILQRLLSSEGYEVDVVPDGASAVE
Ga0209275_104502241	3300027884	Soil	MATATLAATLNTPISEMRPVPVDRILVIEDDYALRTALRRLFSSEGYHVDVVSD
Ga0209380_100295121	3300027889	Soil	MATATLAATLNAPISEPRPAPMERILVIEDDRALRKSLARLFSSE
Ga0209624_106155833	3300027895	Forest Soil	MATATLSASLTAPLSEHRLTAMERILVIEDDGASRKILRQLLSSEGYEVDVASD
Ga0209624_106303421	3300027895	Forest Soil	MATAILATTFNTPVAEPRPDTMGRILVIEGDAALQKILRRL
Ga0209067_100714204	3300027898	Watersheds	MATATLEITLNTPISELRPVTTDRILVIEDDAALRRILRRLFSAEGYE
Ga0209415_100292491	3300027905	Peatlands Soil	MATATLAATLNTPISEMRPATMDRILVIEDDGALREILRRLFSSEGYEVDVVPD
Ga0209698_111519341	3300027911	Watersheds	MATTILGTALNPPLAEQRSATMDRILVIEDDGALQKVLSRLFSSEGYDVDVVP
Ga0209168_104494151	3300027986	Surface Soil	MATATLAATLNGPMAELRPTPMQRILVIEDDSAFQK
Ga0265356_10159801	3300028017	Rhizosphere	MATASLSATLNAPISGLRLAPMERILVIEDDGALRKVLRRLFSSEGYEVDVASDADCGLERLRQETPA
Ga0265351_10255331	3300028020	Soil	MAATSVAATLTTPMSELRPAPMERILVIEHDVALRKILRRLLSSEGYEVEVVP
Ga0308309_109102152	3300028906	Soil	MATATLAATLNTPISELRPAAVDRILVIEDDYALRKVLRRLFSSEGYQVDVVSDGM
Ga0222748_10953411	3300029701	Soil	MAATPLAATLNNPMSELRSAPMERILVIEHDGPLRRILQRLFSSEGYVVDVVPDAVCGLERLR
Ga0247271_1019098	3300029903	Soil	MAATTLAATLSIPTLELRPPSVERVLIIEHDVALGKILQRLFSSEGYAVDVVPPTIT
Ga0311330_100434141	3300029945	Bog	MAATTLARTLNPPISELRSAATERILVIEHDGALRKILERLFSSAGYVVDIVPDAACGLERLRQGVPAA
Ga0311343_102972183	3300029953	Bog	MAASTLAATSSISTAKPRSGSRERILVIEHDDALRTVLQRLFSSEGYEVDV
Ga0311331_101167444	3300029954	Bog	MAATTLARTLNPPISELRSAATERILVIEHDGALRKILERLFSSAGYVVDIVP
Ga0311339_110633221	3300029999	Palsa	MATTTLAATWNTPISKLQSRPTERILVIEHDGGLRKILRRLFSSEGYEVDIVPDAVCGLERLRQGS
Ga0311338_118865292	3300030007	Palsa	MAATSLAATSSIPTELRSAPMERILVIEQDGALRKVLQRLFSSEGYEVDIAFD
Ga0311370_103599991	3300030503	Palsa	MASITLAATLNTPKSELRPATIDRILVIEHDRALQKILQRLFS
Ga0210263_11848471	3300030593	Soil	MAATSLAATLNSPISELRSAPMERILVIEHDGPLRKILQRLFSSGGYVVDVVPDAVCGLERLRQGLPAA
Ga0302310_100687741	3300030737	Palsa	MAATTLAATSNPPTSVLRSAPTERILVIEHDGALRKVLQRLFSSEGYEVDVAFDAV
Ga0265462_125647221	3300030738	Soil	MAATSLAATLNSPISELRSAPMERILVIEHDGPLRKILQRLFSSE
Ga0302312_101047001	3300030746	Palsa	MAATTLARTLNPPISELRSAATERILVIEHDGALRKILERLFSSAGYVVDIVPDAACGLERLRQGVPAAGVL
Ga0302180_100991743	3300031028	Palsa	MASITLAATLNTPKSELRPATIDRILVIEHDRALQKILQRLFSSEGYEVDV
Ga0170824_1022540382	3300031231	Forest Soil	MATATSAATLSTPISELRPARMERILVIEDDGASRKILRRLFSSEGYEVDVV
Ga0170820_133658741	3300031446	Forest Soil	MATATLTATLNTPISEPQPAQMDRILVIEDDDALRKVLRRLLSS
Ga0302326_120098931	3300031525	Palsa	MGTVTLAAPLNTPMSEPRLATVDRILVIEDDKPLRKILRRLLSSEGYEV
Ga0310686_1002744911	3300031708	Soil	MATITLAAPLNTPMSELRAAPMERILVIEDDAALRKILRRLFSSEGYEVDIAPDARAGLE
Ga0310686_1044858124	3300031708	Soil	MAATTLAADPNTPISELQSAPTERILVVEHDGALRKVLRRLFSSEGYEVDVISDRAAGLEMLRKRTPSISARQLRIWSSVCPS
Ga0310686_1182272111	3300031708	Soil	MATATLAATLNTPMAELRPTPMQRILVIEDDSALQKILRRLFSSEGYEVDV
Ga0307476_100516123	3300031715	Hardwood Forest Soil	MATATLSATLAVPISEPLSTMDRILVIEDDGALRKILRRLFSSEGYE
Ga0307476_106042263	3300031715	Hardwood Forest Soil	MATTVLGTALNPPTAEPRNATMDRILVIEGDSVLRKILRRLFSSEGYE
Ga0307475_100127105	3300031754	Hardwood Forest Soil	MATATSAATLNTAISELRPATMDRILVIEDDDALRKVLRRLFSSEGYEVDVVPD
Ga0307478_100754501	3300031823	Hardwood Forest Soil	MATATLSATLNPPISGLRLAPMGRILVIEDDGALRKV
Ga0307478_107866061	3300031823	Hardwood Forest Soil	MATATLAATLNTPISELRPPTVDRILVIEDDDALRKVLRRLFSSEGYQVDVVSD
Ga0307478_111048181	3300031823	Hardwood Forest Soil	MATATLSAPLDTPIAGLRLAPMGRILVIGDDDALWKVLWRLFSSEGYEVDIASDAVRG
Ga0310916_106709312	3300031942	Soil	MATTTSAATLNTPLPAQRVATMDRILVIEDDSALRKILQRLFASEGYEVEAVPDSGVVLEMLRQDHSPQ
Ga0307479_110077141	3300031962	Hardwood Forest Soil	MAAATVAATLNTPISEMQPAPRERILVIESDGTLQKSLRQLFSSEGY
Ga0307479_110180362	3300031962	Hardwood Forest Soil	MATTILATALTAPIAELRPATLDRILIIEHDGALQKVLRRLFCSEGYDVDVVPDSVCGL
Ga0318559_104942231	3300032039	Soil	MATTTLPATLNTPLSELRPVTIDRILVIEDDSALQKILHRLFSSERYDVEVVPNGEAALEMLRHR
Ga0311301_127012981	3300032160	Peatlands Soil	MATATLAATLNAPISEMRPATMDRILVIEDDGALREILRRLF
Ga0307470_105246582	3300032174	Hardwood Forest Soil	MAAATLAATLNTPISEMQPAPRERILVIEADAALQKSLRQ
Ga0307471_1017783902	3300032180	Hardwood Forest Soil	MAATTSAATSSIPISERLSDSSERVLVVEHDGALRKILQRLFSSEGYVVDVVPDAACGLERLQQQAPAAVVLD
Ga0307471_1037382691	3300032180	Hardwood Forest Soil	MATATSAATLNTSISELRPAAVDRILVIEGDDALRKVLRR
Ga0310810_102247443	3300033412	Soil	MKYESSGDSGEEEELMGTTTLAATLNTPMSELRPATMDRILIIEDDSVLRKILQRLFSSEGYEVEVVPDSVAGLERLR
Ga0370515_0201705_1_177	3300034163	Untreated Peat Soil	MAATTLAATLSIPTPKLRSPSVEQILIIEHDVALRKTLQQLFSSEGYAVDVVPDAVCGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035869

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences