NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F035418

Metagenome Family F035418

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F035418
Family Type Metagenome
Number of Sequences 172
Average Sequence Length 61 residues
Representative Sequence MLDQRISRRSLLAGAVGTSALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQR
Number of Associated Samples 143
Number of Associated Scaffolds 172

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.36 %
% of genes near scaffold ends (potentially truncated) 95.35 %
% of genes from short scaffolds (< 2000 bps) 90.70 %
Associated GOLD sequencing projects 135
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.442 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(11.046 % of family members)
Environment Ontology (ENVO) Unclassified
(31.395 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.372 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 51.14%    β-sheet: 0.00%    Coil/Unstructured: 48.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 172 Family Scaffolds
PF05721PhyH 44.77
PF13103TonB_2 4.65
PF10518TAT_signal 2.91
PF13458Peripla_BP_6 1.74
PF13432TPR_16 1.74
PF06808DctM 1.74
PF00296Bac_luciferase 1.16
PF02310B12-binding 1.16
PF13424TPR_12 1.16
PF00215OMPdecase 0.58
PF00561Abhydrolase_1 0.58
PF13416SBP_bac_8 0.58
PF04909Amidohydro_2 0.58
PF02518HATPase_c 0.58
PF14248DUF4345 0.58
PF00487FA_desaturase 0.58
PF01070FMN_dh 0.58
PF01266DAO 0.58
PF06993DUF1304 0.58
PF12867DinB_2 0.58
PF01425Amidase 0.58
PF13414TPR_11 0.58
PF07969Amidohydro_3 0.58
PF13522GATase_6 0.58
PF02142MGS 0.58
PF12706Lactamase_B_2 0.58
PF01717Meth_synt_2 0.58
PF02607B12-binding_2 0.58
PF04820Trp_halogenase 0.58
PF03480DctP 0.58
PF00903Glyoxalase 0.58
PF00282Pyridoxal_deC 0.58
PF04392ABC_sub_bind 0.58
PF00072Response_reg 0.58

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 172 Family Scaffolds
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 44.77
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.16
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 0.58
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.58
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.58
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.58
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 0.58
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.58
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.58
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.58
COG3759Uncharacterized membrane proteinFunction unknown [S] 0.58


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.44 %
UnclassifiedrootN/A7.56 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100231133All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300000550|F24TB_12030056All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300000891|JGI10214J12806_10087938All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300000891|JGI10214J12806_10648807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1194Open in IMG/M
3300000891|JGI10214J12806_11646477All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300000956|JGI10216J12902_101645905All Organisms → cellular organisms → Bacteria2142Open in IMG/M
3300000956|JGI10216J12902_108037148All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300001431|F14TB_101106406All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300002560|JGI25383J37093_10210235Not Available511Open in IMG/M
3300003995|Ga0055438_10087348Not Available864Open in IMG/M
3300004019|Ga0055439_10138373All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300004058|Ga0055498_10057938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria701Open in IMG/M
3300004463|Ga0063356_101487041All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300004463|Ga0063356_104065084All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300004479|Ga0062595_101693060All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300004479|Ga0062595_102476629All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005093|Ga0062594_101567113All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300005172|Ga0066683_10138231All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300005180|Ga0066685_10703394All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium693Open in IMG/M
3300005295|Ga0065707_10555791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria718Open in IMG/M
3300005330|Ga0070690_101734391All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300005331|Ga0070670_102160461All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300005332|Ga0066388_103402904All Organisms → cellular organisms → Bacteria → Proteobacteria812Open in IMG/M
3300005332|Ga0066388_106969169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria569Open in IMG/M
3300005340|Ga0070689_101566024All Organisms → cellular organisms → Bacteria → Proteobacteria598Open in IMG/M
3300005366|Ga0070659_101403027All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005440|Ga0070705_100737339All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales777Open in IMG/M
3300005445|Ga0070708_100776623All Organisms → cellular organisms → Bacteria → Proteobacteria901Open in IMG/M
3300005447|Ga0066689_10662755All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium655Open in IMG/M
3300005450|Ga0066682_10339642All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300005451|Ga0066681_10330736All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium935Open in IMG/M
3300005457|Ga0070662_100379159All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300005457|Ga0070662_100430424All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300005458|Ga0070681_12005753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales507Open in IMG/M
3300005471|Ga0070698_101200893All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005536|Ga0070697_100416245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1167Open in IMG/M
3300005544|Ga0070686_100715672All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005545|Ga0070695_101502682All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005546|Ga0070696_101316787All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005546|Ga0070696_101548213All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005546|Ga0070696_101899034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300005549|Ga0070704_100107757All Organisms → cellular organisms → Bacteria → Proteobacteria2114Open in IMG/M
3300005552|Ga0066701_10701947All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium608Open in IMG/M
3300005553|Ga0066695_10814560All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005568|Ga0066703_10097992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium1720Open in IMG/M
3300005578|Ga0068854_101084532All Organisms → cellular organisms → Bacteria → Proteobacteria713Open in IMG/M
3300005617|Ga0068859_101299568All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300005713|Ga0066905_100865309All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria788Open in IMG/M
3300005764|Ga0066903_101561173All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1250Open in IMG/M
3300005843|Ga0068860_101684542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria656Open in IMG/M
3300005888|Ga0075289_1081759All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium535Open in IMG/M
3300006031|Ga0066651_10656353All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300006031|Ga0066651_10758865All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium524Open in IMG/M
3300006173|Ga0070716_101409238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria567Open in IMG/M
3300006755|Ga0079222_12544437All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium514Open in IMG/M
3300006791|Ga0066653_10655360All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300006845|Ga0075421_100039793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5958Open in IMG/M
3300006847|Ga0075431_101975350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales539Open in IMG/M
3300006881|Ga0068865_100668296All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales885Open in IMG/M
3300006914|Ga0075436_100570247All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300006931|Ga0097620_102896884All Organisms → cellular organisms → Bacteria → Proteobacteria525Open in IMG/M
3300006969|Ga0075419_11112127All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria579Open in IMG/M
3300007004|Ga0079218_10373208All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300007004|Ga0079218_10944375All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300007004|Ga0079218_11035228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria828Open in IMG/M
3300009012|Ga0066710_101084780All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1238Open in IMG/M
3300009012|Ga0066710_103702497All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300009038|Ga0099829_11009595All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300009090|Ga0099827_10648254All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300009137|Ga0066709_100413994All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1874Open in IMG/M
3300009137|Ga0066709_100478191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium1749Open in IMG/M
3300009156|Ga0111538_11344398All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300009157|Ga0105092_10845091All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300009162|Ga0075423_12729766All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium541Open in IMG/M
3300009176|Ga0105242_11477786All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300009813|Ga0105057_1066152All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300009822|Ga0105066_1172250All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010047|Ga0126382_12540372All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300010048|Ga0126373_10554766All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300010326|Ga0134065_10095967All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300010362|Ga0126377_11106024All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium861Open in IMG/M
3300010391|Ga0136847_13497260Not Available566Open in IMG/M
3300010398|Ga0126383_12658707All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium584Open in IMG/M
3300011436|Ga0137458_1179935All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300012211|Ga0137377_11674809All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300012350|Ga0137372_10966690Not Available597Open in IMG/M
3300012362|Ga0137361_11869256All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300012909|Ga0157290_10038030All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300012917|Ga0137395_10792535All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300012922|Ga0137394_11441877All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium548Open in IMG/M
3300012929|Ga0137404_10116866All Organisms → cellular organisms → Bacteria2175Open in IMG/M
3300012929|Ga0137404_12147625All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300012930|Ga0137407_11527612All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300012971|Ga0126369_13471937Not Available516Open in IMG/M
3300012972|Ga0134077_10349966All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300013297|Ga0157378_13202703All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300013307|Ga0157372_10767816All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300014326|Ga0157380_10173282All Organisms → cellular organisms → Bacteria1888Open in IMG/M
3300014497|Ga0182008_10170409All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300014969|Ga0157376_10747528All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria987Open in IMG/M
3300015245|Ga0137409_10279765All Organisms → cellular organisms → Bacteria1472Open in IMG/M
3300015245|Ga0137409_10557225All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300015359|Ga0134085_10344098All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300015373|Ga0132257_104132076All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300018028|Ga0184608_10261593All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300018075|Ga0184632_10318325All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300018075|Ga0184632_10337726All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300018078|Ga0184612_10111201All Organisms → cellular organisms → Bacteria1434Open in IMG/M
3300018422|Ga0190265_10188188All Organisms → cellular organisms → Bacteria2062Open in IMG/M
3300018422|Ga0190265_10647285All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1177Open in IMG/M
3300018422|Ga0190265_11731623All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300018482|Ga0066669_11886742All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium555Open in IMG/M
3300019881|Ga0193707_1169007All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300020004|Ga0193755_1029398All Organisms → cellular organisms → Bacteria1819Open in IMG/M
3300021403|Ga0210397_11227429All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300021476|Ga0187846_10113445All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300022534|Ga0224452_1142167All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300025910|Ga0207684_10059761All Organisms → cellular organisms → Bacteria3237Open in IMG/M
3300025911|Ga0207654_10940890All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300025922|Ga0207646_10456875All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300025957|Ga0210089_1010846All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300025961|Ga0207712_10356457All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1217Open in IMG/M
3300025961|Ga0207712_10426558All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1120Open in IMG/M
3300026001|Ga0208000_101558All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300026118|Ga0207675_101653008All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium661Open in IMG/M
3300026296|Ga0209235_1116353All Organisms → cellular organisms → Bacteria → Proteobacteria1129Open in IMG/M
3300026343|Ga0209159_1280928All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300026469|Ga0257169_1043540All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300026536|Ga0209058_1009448All Organisms → cellular organisms → Bacteria7062Open in IMG/M
3300027381|Ga0208983_1031631Not Available1035Open in IMG/M
3300027490|Ga0209899_1032684All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300027717|Ga0209998_10000226All Organisms → cellular organisms → Bacteria → Proteobacteria19203Open in IMG/M
3300027821|Ga0209811_10024717All Organisms → cellular organisms → Bacteria → Proteobacteria1982Open in IMG/M
3300027821|Ga0209811_10211206All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300027909|Ga0209382_12250775All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium514Open in IMG/M
3300028381|Ga0268264_10748940All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300028792|Ga0307504_10118229All Organisms → cellular organisms → Bacteria → Proteobacteria866Open in IMG/M
3300028803|Ga0307281_10426542All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300028803|Ga0307281_10436544All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300028812|Ga0247825_10980583All Organisms → cellular organisms → Bacteria614Open in IMG/M
(restricted) 3300031150|Ga0255311_1108299All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium604Open in IMG/M
(restricted) 3300031197|Ga0255310_10208052All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium548Open in IMG/M
3300031198|Ga0307500_10131622All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria699Open in IMG/M
(restricted) 3300031248|Ga0255312_1032619All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300031562|Ga0310886_10558608All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300031720|Ga0307469_12053659All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300031720|Ga0307469_12481683All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium506Open in IMG/M
3300031740|Ga0307468_100630111All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300031740|Ga0307468_100762543All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium819Open in IMG/M
3300031740|Ga0307468_101107022All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300031740|Ga0307468_101796356All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300031820|Ga0307473_10262000All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300031824|Ga0307413_12090868All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300031892|Ga0310893_10404029All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium599Open in IMG/M
3300031901|Ga0307406_10676722All Organisms → cellular organisms → Bacteria → Proteobacteria859Open in IMG/M
3300032180|Ga0307471_100965676All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1019Open in IMG/M
3300032180|Ga0307471_103354388All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium567Open in IMG/M
3300032180|Ga0307471_103826184All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300032205|Ga0307472_100095782All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2026Open in IMG/M
3300032770|Ga0335085_12064783All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300032782|Ga0335082_10628598All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300033480|Ga0316620_12206764All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300033486|Ga0316624_11641877All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300033814|Ga0364930_0116532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes913Open in IMG/M
3300034692|Ga0373917_0066094All Organisms → cellular organisms → Bacteria576Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.05%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.98%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.98%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.40%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.07%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.33%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.33%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.74%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.74%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.74%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.74%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.16%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.16%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.16%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.16%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.16%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.16%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.16%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.16%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.58%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.58%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.58%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.58%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.58%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.58%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.58%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.58%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.58%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.58%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.58%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.58%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009813Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20EnvironmentalOpen in IMG/M
3300009822Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025957Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026001Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027490Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034692Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10023113323300000364SoilMLDQRISRRSLLAGAVGSTALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNKA
F24TB_1203005623300000550SoilMLDKRISRRSLLAGAVGSSALLTLPRVAFPAVKKGTSLRLWILKTYVEPTNKA
JGI10214J12806_1008793823300000891SoilMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVEPTNKAI
JGI10214J12806_1064880723300000891SoilMPSRHLSRRTVLAGALGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKH
JGI10214J12806_1164647723300000891SoilMLDQRISRRSLLAGAAGTSALLALPKSSPAQGPAVKKGTSLRLWILKTYVEPTNKAI
JGI10216J12902_10164590533300000956SoilMASGRLSRRNFLASAVGASAALALPIAAAPAVKKGTSLRLWILKTYVEPTNKAIEASA
JGI10216J12902_10803714813300000956SoilMLDQRISRRSLLAGAVGSSALLTLPRVAFPAVKKGTSLRLWILKTYVEPTN
F14TB_10110640623300001431SoilMLDKRISRRSLLAGAVGSSALLTLPRVAFPAVKKGTSLRLWILKTYVEPTNKAIE
JGI24737J22298_1014654213300001990Corn RhizosphereMLDSPISRRSLLAGAVGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPT
JGI25383J37093_1021023513300002560Grasslands SoilMRDARLSRRNFLAGAVGASAAFALPGLAAPAVKKGTSLRLWILKTYVEPTNKAIEA
Ga0055438_1008734813300003995Natural And Restored WetlandsMGDRGFSRRKFLAGAVGASATLALARPAALAAPAVRKGTSLRLWILKTYVEPTNKAIEAS
Ga0055439_1013837323300004019Natural And Restored WetlandsMLDQRISRRSLIAGAVGTSALLTLPKPAAPAVKKGASLRLWILKTYVEPTNKAIEASAQR
Ga0055498_1005793813300004058Natural And Restored WetlandsMLDQRISRRSLLAGAAGTSALLTLPKSTRAQAPAVKKGTSLRLWILKTYVEPTNKAIEASAQ
Ga0062589_10143045923300004156SoilMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVE
Ga0063356_10148704123300004463Arabidopsis Thaliana RhizosphereMLDQRISRRSLLAGAAGTSALLALPKSSPAQGPAVKKGTSLRLWILKTYVEPTNKAIEAS
Ga0063356_10406508423300004463Arabidopsis Thaliana RhizosphereMPYPTVSRRKILAGALGTSAVLALPRPAAPAVKKGTALRMWILKTYVEPTNKAIE
Ga0062595_10169306023300004479SoilMLDSRISRRSLLAGAVGTSALLTLPRTGFPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0062595_10247662913300004479SoilMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVEP
Ga0062594_10156711323300005093SoilMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0066683_1013823123300005172SoilMPDRRLSRRSLLAGAVGASAALALPGMAAPQIKKGASLRLWILKTYVEPTNKA
Ga0066685_1070339423300005180SoilMRDRRLTRRTFLAGAAGASVALALPLRLDAAPAVKKGASLRLWILKTYVEPTNK
Ga0065707_1055579113300005295Switchgrass RhizosphereMLDKRISRRSLLAGAVGSSALLTLPRVAFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKNGASVTVEYF
Ga0070690_10173439113300005330Switchgrass RhizosphereMPNVRLSRRHFLSGAVGAAAALALPIDAAPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0070670_10216046113300005331Switchgrass RhizosphereMRHVLLSRRHFLSGAVGAATALALPIDAAPAVKKGAALRLWILKTYVEPTNKAIEASAAR
Ga0066388_10340290413300005332Tropical Forest SoilMLDRTVSRRRLLAGALGASAALTLPRPAAPAVKKGTALRMWILKTYVEPTNKAIEASAQRWAQKH
Ga0066388_10696916913300005332Tropical Forest SoilMHDGRIGRRTLLAGALGASAALAAPRIGAPAVKKGASLRMWILKTYVEPTNKAIEASAQ
Ga0070689_10156602423300005340Switchgrass RhizosphereMPSARLSRRNFLAGAVGASAALALPLRIDAAPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0070659_10140302713300005366Corn RhizosphereMPSARLSRRNFLAGAVGASAALALPLRIDAAPAVKKGTSLRLWILKTYVEPTNKAIEAAAQRWAQKHGAQVT
Ga0070705_10073733923300005440Corn, Switchgrass And Miscanthus RhizosphereMPSRHLSRRTVLAGALGASAALTLPRLGFPAVKKGTNLRLWILKTYVEPTNKAIEASAQRWAQKHGAAV
Ga0070708_10077662323300005445Corn, Switchgrass And Miscanthus RhizosphereMRDRRLSRRSLLTGAVGASAALALPRIAAPQIKKGANLRLWILKTYVEPTNKAVEAAAQRWAQKHGAQVT
Ga0066689_1066275523300005447SoilMADRRLTRRHFLAGAAGASAALALPLRLDAAPAVKKGASLRLWILKTYVEPTNKAIE
Ga0066682_1033964213300005450SoilMRDGRLSRRKFLAGAVGSSAVLALAGPAVPAVKKGTSLRLWTLKTYVEPTNKAIEASAQRWAQKHGAAVT
Ga0066681_1033073613300005451SoilMADRRLTRRHFLAGAAGASAALARPLGLDAAPAVKKGTSLRLWILKTYVEPTNKAIEAS
Ga0070662_10037915923300005457Corn RhizosphereMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVEPTNKAIEAS
Ga0070662_10043042423300005457Corn RhizosphereMNTARLTRRTFLAGAAGASAALALPLRVDAAPAVKKGASLRLWILKTYVEPTNKAIE
Ga0070681_1200575323300005458Corn RhizosphereMPSRHLSRRTVLAGALGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGA
Ga0070698_10120089313300005471Corn, Switchgrass And Miscanthus RhizosphereMPYPTVSRRKILAGALGTSAVLALPRPAAPAVKKGTALRMWILKTYVEPTNKAIEASAAR
Ga0070697_10041624523300005536Corn, Switchgrass And Miscanthus RhizosphereMLDSPISRRSLLAGAVGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPTNKAIEASAQRWAQKN
Ga0070686_10071567213300005544Switchgrass RhizosphereMNTARLTRRTFLAGAAGASAALALPLRVDAAPAVKKGASLRLWILKTYVEPTNKAI
Ga0070695_10150268213300005545Corn, Switchgrass And Miscanthus RhizosphereMRDRRLTRRTFLAGAAGASAALALPLRVDAAPAVKKGASLRLWILKTYVEPTNKAIEASA
Ga0070696_10131678713300005546Corn, Switchgrass And Miscanthus RhizosphereMRDRRLSRRSLLTGAVGASAALALPRIAAPQIKKGANLRLWILKTYVEPTNKAVEAAAQRWAQKHGAQV
Ga0070696_10154821313300005546Corn, Switchgrass And Miscanthus RhizosphereMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVEPTNKAIEASAQ
Ga0070696_10189903423300005546Corn, Switchgrass And Miscanthus RhizosphereMSDQRLSRRSLLAGAAGASALLTLPKSARAQGPAVKKGTSLRLWILKTYVEPTNKAIEA
Ga0070704_10010775713300005549Corn, Switchgrass And Miscanthus RhizosphereMPSRHLSRRSVLAGALGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGAA
Ga0066701_1070194723300005552SoilMRDRRLTRRTFLAGAAGASAALALPLRLDGAPAVKKGASLRLWILKTYVEPTNKAIE
Ga0066695_1081456013300005553SoilMRDGRLSRRKFLAGAVGSSAVLALAGPAVPAVKKGTSLRLWTLKTYVEPTNKAIEASAQRWAQKHGA
Ga0066703_1009799233300005568SoilMRDARLSRRTFLAGAVGSSALFALAGPAAPGVKKGTSLRLWILKTYVEPTNKAIE
Ga0068854_10108453213300005578Corn RhizosphereMPHPTVSRRTILAGALGTSALLALPRPAAPAVKKGTALRMWILKTYVEPTNKAIEASAAR
Ga0068859_10129956823300005617Switchgrass RhizosphereMLDKRISRRSLLAGAVGSSALLTLPRVGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQK
Ga0066905_10086530933300005713Tropical Forest SoilMAERRNGRRAFLAGAVGASAALALGVNSAPAQKKGASLRLWILKTYVEPTNKAIEASAQRWAQK
Ga0066903_10156117323300005764Tropical Forest SoilMPSTRLSRRTFLAGLAGAAGASAALALPGVAFPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0068860_10168454213300005843Switchgrass RhizosphereMLDSPISRRSLLAGAVGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPTNKAIEASAQR
Ga0075289_108175923300005888Rice Paddy SoilMIDPRISRRSLLAGAVGTSALLTLPKPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQR
Ga0066651_1065635323300006031SoilMLDHRVSRRKLLLGALGTSAALALPRPAAPAVKKGASLRLWILKTYVEPTNK
Ga0066651_1075886523300006031SoilMRDRRLTRRTFLAGAAGASAALALPLRLDGAPAVKKGASLRLWILKTYVEPTNKA
Ga0070716_10140923813300006173Corn, Switchgrass And Miscanthus RhizosphereMLDSPISRRSLLAGAVGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPTNKAIEASAQRWAQKNG
Ga0075422_1011972723300006196Populus RhizosphereMSQRRISRRAVLAGALGATAALSLPRIGFPAVKKGTALRMWILKTYVEPTNKAIEAS
Ga0079222_1254443723300006755Agricultural SoilMATVHLNRRHFVSGALGAATALALPLDVSAAVKKGTSLRLWILKTYVEPTNKAI
Ga0066653_1065536023300006791SoilMPHPVSRRGFLIGAAGASAALAIGAQQAPAQKKAANLRMWILKTYVEPTNKAIEASAARWAQKNGG
Ga0075421_10003979313300006845Populus RhizosphereMAHRLVSRRTFLVSAAGASASLALPGLGFPQVKKGANLRLWILKTYVEPTNKAIEASAQRWAQSHGA
Ga0075431_10197535023300006847Populus RhizosphereMPPRHLSRRTVLAGALGASAALAVPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKH
Ga0075429_10093648113300006880Populus RhizosphereMSQRHISRRAVLAGALGATAALSLPRIGFPAVKKGTALRMWILKTYVEPTNKAIEAS
Ga0068865_10066829623300006881Miscanthus RhizosphereMPSRHLSRRTVLAGALGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQK
Ga0075436_10057024713300006914Populus RhizosphereMLRDTRLTRRTFLAGAAGASAALALPLRVDAAPAVKKGASLRLWILKTYVEPTNKAIEGSAQRWA
Ga0097620_10289688423300006931Switchgrass RhizosphereMPHPTVSRRTILAGALGTSALLALPRPAAPAVKKGTALRMWILKTYVEPTNKAIEAS
Ga0075419_1111212723300006969Populus RhizosphereMLDSPISRRSLLAGAVGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPTNKAIEASAQRWAE
Ga0079218_1037320843300007004Agricultural SoilMPSGRLSRRHFLAGAAGASAALALPLRLDAAPAVKKGTALRLWILKTYVEPTNKAIEASAARWGEKHGAS
Ga0079218_1094437523300007004Agricultural SoilMPHARVSRRKFLAGAVGASAALAVGGAAFGAPAVKKGTSLRLWILKTYVEPTNKAIEASTQRWAEK
Ga0079218_1103522813300007004Agricultural SoilMPDQRLSRRSLLAGAAGASALLTLPKSARAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRW
Ga0066710_10108478033300009012Grasslands SoilMRDRRLTRRTFLAGAAGASAALALPLRLDGAPAVKKGAGLRPRILKTQVKPTNTAREGTA
Ga0066710_10370249723300009012Grasslands SoilMPHLVSRRGFLIGAAGASAALAMGAQQAPAQKKAANLRLWILKTYVEPTNKAIEASAARWAQKHGGAV
Ga0099829_1100959513300009038Vadose Zone SoilMIRRNAMHDHRVSRRKLLLGALGTSAALALPRPAAPAVKKGASLRLWILKTYVEPTNKAIEASAQRW
Ga0099827_1064825413300009090Vadose Zone SoilMPDQRISRRSLLVGAAGTSALLTLPKSVHARGPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0066709_10041399413300009137Grasslands SoilMADRRLTRRHFLAGAAGASAALALPLRLDAAPAVKKGASLRLWILKTYVEP
Ga0066709_10047819133300009137Grasslands SoilMRDARLSRRTFLAGAVGSSALFALAGPAAPAVKKGTSLRLWILKTYVEPTNKA
Ga0111538_1134439823300009156Populus RhizosphereMASGRLSRRHFLASAVGASAALALPIAAAPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0105092_1084509113300009157Freshwater SedimentMPSRHISRRTVLAGALGASATLALPRLGFPAVKKGTSLRLWILKSFVEPTNMAIEASAQRWAQKH
Ga0075423_1272976623300009162Populus RhizosphereMRDRRLTRRTFLAGAAGASAALALPLRLDAAPAVKKGASLRLWILKTYVEPTN
Ga0105242_1147778613300009176Miscanthus RhizosphereMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKH
Ga0105057_106615223300009813Groundwater SandMTGAVGASAALALPGVAAPQVKKGASLRLWILKTYVEPTNKAVEAAAQRWAQKHGAQVTVEY
Ga0105066_117225023300009822Groundwater SandMQDRRFSRRQFMAGMVGTGAAVTLGPRVISAAPMVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQ
Ga0126382_1254037213300010047Tropical Forest SoilMSDFTISRRKILAGALGTSAVLALPRPAAPVVKKGTALRMWILKTYVEPTNKAIEASAARWAA
Ga0126373_1055476623300010048Tropical Forest SoilMLDHRISRRSLLAGALGTSALLSRPRSAVAAPAVRKGTSLRLWILKTYVEPTN
Ga0134064_1004436413300010325Grasslands SoilMRDARLTRRNFLAGAVGASAAFALPGVAAPAVKKGTSLRLWILKTYVE
Ga0134064_1025476323300010325Grasslands SoilMRDARLSRRTFLTGAVGSSALFALAGPAAPAVKKGTSLRLWILKTYVEP
Ga0134065_1009596713300010326Grasslands SoilMRDGRLSRRKFLAGAVGSSAVLALAGPAVPAVKKGTSLRLWTLKTYVEPTNKAIEASAQ
Ga0126377_1110602413300010362Tropical Forest SoilMSQRRISRRAVLGGALGATAVLSMPRIGFPAVKKGTALRMWILKTYVEPTNKAIEASAQRWAQK
Ga0136847_1349726013300010391Freshwater SedimentMRDRGFSRRKFLAGAVGASATLALASPVAVAAPAVRKGTSLRLWILKTYVEPTNKAIEASAQRW
Ga0126383_1265870723300010398Tropical Forest SoilMHDRRIGRRTLLAGALGASAALAAPRIGAPAVKKGASLRMWILKTYVEPTNKAIEATAQR
Ga0137458_117993513300011436SoilMPDQRISRRSLLAGAVGTSALLTLPKSARAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGASVTVE
Ga0137377_1167480923300012211Vadose Zone SoilMIRRNAMLDHPVSRRKLLLSALGTSAALALPRAASPAVKKGASLRLWILKTYVEPTNKAVEASAQRWAQKHGA
Ga0137372_1096669023300012350Vadose Zone SoilMRVHRGFSRRKFLAGAVGASATLALGSSVALAAPAVRKGTSLRLWILKTYVEPTNK
Ga0137361_1186925613300012362Vadose Zone SoilMLDHRVSRRKLLVGALGTSAALALPRPAAPAVKKGASLRLWILKTYVEPTNKAVE
Ga0157290_1003803023300012909SoilMLDQRISRRSLLAGAVGSTALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNKAI
Ga0137395_1079253513300012917Vadose Zone SoilMLDSRISRRSLLAGAVGTSALLTLPRPAFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKN
Ga0137394_1144187713300012922Vadose Zone SoilMAHRRVSRRQFLMGAAGAGATLALGAREAPAQKKAASLRLWILKTYVEPTNKAIEASAQRWAAKHGGSV
Ga0137404_1011686613300012929Vadose Zone SoilMPSHHLSRRSVLAGAVGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKH
Ga0137404_1214762523300012929Vadose Zone SoilMIRRNAMHDPVSRRKLLLGALGTSAALALPRPAAPAVKKGASLRLWILKTYVEPTNKAIEASA
Ga0137407_1152761223300012930Vadose Zone SoilMLDQRISRRSLLAGAAGTSALLTLPKSAHAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQ
Ga0126369_1347193723300012971Tropical Forest SoilMPSGRLSRRNFLAGAVGASAALALPLRLDAAPTVKKGASLRLWILKTYVEPTNKA
Ga0134077_1034996623300012972Grasslands SoilMLDQRISRRSLLAGAVGSSALLTLPRVAFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKNGA
Ga0157378_1320270313300013297Miscanthus RhizosphereMPNVRLSRRHFLSGAVGAAAALALPIDAAPAVKKGTSLRLWILKTYVEP
Ga0157372_1076781623300013307Corn RhizosphereMSQCHISRRAVLAGALGATAALSLPRIGFPAVKKGTALRMWILKTYVEPTNKAIEAS
Ga0157380_1017328213300014326Switchgrass RhizosphereMLDSPISRRSLLAGAVGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPTNKAIEASAQRWAQKNGASVS
Ga0182008_1017040923300014497RhizosphereMLDSPISRRSLLAGAVGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPTNKAIEASAQRWAQ
Ga0157376_1074752813300014969Miscanthus RhizosphereMRDRRLSRRSLLTGAVGASAALALPRIAAPQIKKGANLRLWILKTYVEPTNKAVEAAAQRWAQKHGAQ
Ga0137409_1027976533300015245Vadose Zone SoilMLDQRISRRSLLAGAVGTSALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQR
Ga0137409_1055722523300015245Vadose Zone SoilMLDQRISRRSLLAGAVGTSALLTLPNGAAAAGPAVKKGASLRLWILKTYVEPTNKAIEASAQRW
Ga0134085_1034409823300015359Grasslands SoilMIRRNAMLDHRVSRRKLLLGALGTSAALALPRPAAPAVKKGASLRLWILKTYVEPTNK
Ga0132257_10413207623300015373Arabidopsis RhizosphereMRDRRLSRRSLLAGALGASAALALPRVAAPQIKKGAGLRLWILKTYVEPTNKAAEAA
Ga0184608_1026159323300018028Groundwater SedimentMPDQRISRRSLLAGAAGTSALLTLPKSVHAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQ
Ga0184632_1031832513300018075Groundwater SedimentMLEKRISRRSLLAGAVGTSALLTLPKPAAPAVKKGTSLRLWTLKTYVEPTNKAIEASAQ
Ga0184632_1033772613300018075Groundwater SedimentMASGRLSRRNFLAGASAALALPGVAAPAVKKGTSLRLWILKTYVEPTNKAIEASAARWGE
Ga0184612_1011120113300018078Groundwater SedimentMLEKRISRRSLLAGVVGTSALLTLPKPAAPAVKKGTSLRLWTLKTYVEPTNKAIEASAQ
Ga0190265_1018818843300018422SoilMPSRHLSRRTVLAGALGASATLALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQ
Ga0190265_1064728523300018422SoilMRERLSRRKFLAGAAGASTVLGLPHGVVAAPAVKKGASVRLWILKTYVEPTNKAIEASAQRWAQKH
Ga0190265_1173162323300018422SoilMLDQRISRRSLLAGAAGTSALLTLPKSVQAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHG
Ga0066669_1188674213300018482Grasslands SoilMRDARLSRRTFLAGAVGGSAVLALAGPAAPAVKKGTSLRLWILKTYVEPTNKAIEA
Ga0193707_116900723300019881SoilMPDQRISRRSLLAGAAGTSALLTLQKSVHAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGASV
Ga0193755_102939823300020004SoilMPSGRLSRRHFLAGAAGASAALALPLRLDAAPAVKKGTSLRLWILKTYVEPTNKAIEASAARWGEKHGAPA
Ga0210397_1122742913300021403SoilMHDSRISRRSLLAGAAGASALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKNGASVTVE
Ga0187846_1011344513300021476BiofilmMRQRVSRRTFLVGVAGASAALALPRAAAPAVKKGAALRLWILKTYVEPTNKAIEASAQR
Ga0224452_114216713300022534Groundwater SedimentMPSRHLSRRTVLAGALGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAH
Ga0207684_1005976113300025910Corn, Switchgrass And Miscanthus RhizosphereMLESRISRRSLLVGAAGASALLTLPRPAAPAVKKGTSLKLWILKTYVEPTNKAIEASAQ
Ga0207654_1094089023300025911Corn RhizosphereMPSRHLSRRTVLAGALGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGAA
Ga0207646_1045687523300025922Corn, Switchgrass And Miscanthus RhizosphereMLDSRISRRSLLAGAVGTSALLTLPRPAFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKNGASVTVE
Ga0210089_101084613300025957Natural And Restored WetlandsMLDQRISRRSLLAGAAGTSALLTLPKSTRAQAPAVKKGTSLRVWILKTYVEPTNKAIEASAQ
Ga0207712_1035645713300025961Switchgrass RhizosphereMPSGRLSRRNFLTGAVGASAALALPLRLDAAPAVKKGTSLRLWILKTYVEPTNKAIEAS
Ga0207712_1042655813300025961Switchgrass RhizosphereMRDRRLSRRSLLTGAVGASTALALPRIAAPQIKKGANLRLWILKTYVEPTNKAVEAAAQR
Ga0208000_10155813300026001Rice Paddy SoilMIDPRISRRSLLAGAVGTSALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNK
Ga0207675_10165300813300026118Switchgrass RhizosphereMSQRHISRRAVLAGALGATAALSLPRIGFPAVKKGTALRMWILKTYVEPTNKAIEASAQRWA
Ga0209235_111635313300026296Grasslands SoilMRDARLSRRNFLAGAVGASAAFALPGLAAPAVKKGTSLRLWILKTYVEPTNKAIEAAAQRWGQKHGATV
Ga0209159_128092813300026343SoilMPDRRLSRRSLLAGAVGASAALALPGMAAPQIKKGASLRLWILKTYVEPTNKAVEAAAQRWAQKYGA
Ga0257169_104354023300026469SoilMLDSRISRRSLLAGAVGTSALLTLPRPAFPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKNGA
Ga0209058_100944813300026536SoilMRDARLTRRNFLAGAVGASAAFALPGVAAPAVKKGTSLRLWILKTYVEPTNKAIEAA
Ga0208983_103163123300027381Forest SoilMPDQRISRRSLLAGAAGTSALLTLPKSVHAQGPAVKKGTSLRLWTLKTYVEPTNKAIEASAQRWAQK
Ga0209899_103268423300027490Groundwater SandMRERRLSRRSFMTGAVGASAALALPGVAAPQVKKGASLRLWILKTYVEPTNKAVEAAAQRWAQKHGAQV
Ga0209998_10000226203300027717Arabidopsis Thaliana RhizosphereMLDQRISRRSLLAGAVGSTALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNKAIEA
Ga0209811_1002471713300027821Surface SoilMSHPTVSRRKILAGALGTSAVLALPRPAAPAVKKGTALRMWILKTYVEPTNKAIEASAARWGAKHGAS
Ga0209811_1021120613300027821Surface SoilMRDRRLTRRTFLAGAAGASAALALPLRVDAAPAVKKGASLRLWILKTYVEPTNKAIEASAQRWGEKHGAS
Ga0209382_1225077523300027909Populus RhizosphereMPSGRLSRRNFLAGAVGTSAALALPLRLDAAPTVKKGASLRLWILKTYVEPTNKAIE
Ga0268264_1074894013300028381Switchgrass RhizosphereMPDQRISRRSLLAGAAGTSALLTLPKSAHAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQK
Ga0307504_1011822923300028792SoilMPDQRISRRSLLAGAVGTSALLTLPRPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGASV
Ga0307281_1042654213300028803SoilMLDQRISRRSLLAGAVGTSALLTLPKPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQ
Ga0307281_1043654423300028803SoilMLDQRISRRSLLAGAVGTSALLTLPKPAAPAVKKGTSLRLWTLKTYVEPTNKAIEASAQRWAQKH
Ga0247825_1098058323300028812SoilMLDQRISRRSLLAGAVGTSALLTLPKGAAAAGPAVKKGTSLRLWILKTYVEPTNKAIEA
(restricted) Ga0255311_110829913300031150Sandy SoilMLEHRISRRSLLAGAVGTSALLTRPKPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKN
(restricted) Ga0255310_1020805223300031197Sandy SoilMLEHRISRRSLLAGAVGTSALLTRPKPAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQR
Ga0307500_1013162223300031198SoilMRDRRLSRRSLLTAAVGASAVLALPRIAAPQVKKGASLRLWILKTYVEPTNKAVEAAAQRWAQKHGAQ
(restricted) Ga0255312_103261913300031248Sandy SoilMLDQRISRRSLLAGAAGTSALIALPRAARAQGPAVKKGTSLRLWILKTYVEPTNKAIE
Ga0310886_1055860813300031562SoilMLDSRISRRSLLAGAVGTSALLTLPRTGFPAVKKGTSLRLWILKTYVEPTNKAIEASAQR
Ga0307469_1205365913300031720Hardwood Forest SoilMRDRRLSRRSLLTGAVGASAALALPRIAAPQIKKGANLRLWILKTYVEPTNKAVEAAAQRWAQKHGA
Ga0307469_1248168313300031720Hardwood Forest SoilMRDRRLTRRTFLAGAAGASAALALPRSVDAAPAVKKGASLRLWILKTYVEPTNKAIEASAQRWGEKH
Ga0307468_10063011113300031740Hardwood Forest SoilMPSRHLSRRTVLAGALGASAALALPRLGFPAVKKGTSLRLWILKTYVEPTNKAIEASAPPGAQNHRAAG
Ga0307468_10076254323300031740Hardwood Forest SoilMRDRRLTRRTFLAGAAGASATLALPLRLDAAPAVKKGASLRLWILKTYVEPTNKAIEASAQRWGEKHGASVT
Ga0307468_10110702213300031740Hardwood Forest SoilMPDQRISRRSLLAGAAGTSALLTLPKAARAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGASVTVE
Ga0307468_10179635613300031740Hardwood Forest SoilMLEKRISRRSLLAGAVGSSALLTLPRVGFPAVKKGTSLRLWILKTDVEPTNKAIEASAPR
Ga0307473_1026200013300031820Hardwood Forest SoilMLDQRISRRSLLARAVGTSALLALPKPAAPAVKKGASLRLWILKTYVEPTNKAIE
Ga0307413_1209086813300031824RhizosphereMRHGRLTRRKFLAGAVGASAALALPGVAAPAVKKGTSLRLWILKTYVEPTNKAIEAAAQRWAQKHGA
Ga0310893_1040402913300031892SoilMPSGRLSRRNFLAGAVGTSAALALPLRLDAAPTVKKGASLRLWILKTYVEPTNKAIEA
Ga0307406_1067672223300031901RhizosphereMPHGRLTRRHFLAGAVGASAAMALPLPGMAAPAVKKGTSLRLWILKTYVEPTNKAIEAAAQRWAQKHGAQVT
Ga0307471_10096567613300032180Hardwood Forest SoilMRDRRLSRRSLLTGALGASAALALPRVAAPQIKKGAGLRLWILKTYVEPTNKAVEAAAQR
Ga0307471_10335438813300032180Hardwood Forest SoilMSQRRISRRAVLAGALGTTAALALPRMGFPAVKKGTALRMWILKTYVEPTNKAIEASAARWAA
Ga0307471_10382618423300032180Hardwood Forest SoilMLDQRISRRSLLTGAVGTSALLALPRPAAPAVKKGTSLKLWILKTYVEPTN
Ga0307472_10009578213300032205Hardwood Forest SoilMLRDTRLTRRTFLAGAAGASAALALPLRVDAAPAVKKGASLRLWILKTYVEPTNKAIEGSAQRWAEKHGASVTV
Ga0335085_1206478313300032770SoilMLDRHVSRRTILAGALGTSAMLALPRPAAPAIKKGTSLRLWILKTYVEPTNKAIEASAQRWAQKHGASVTVEY
Ga0335082_1062859823300032782SoilMLYRPVSRRHFLAGAAGASAMLALPRAAAPAVKKGTSLRLWILKTYVEPTNKAIEASAQR
Ga0316620_1220676423300033480SoilMRHRLISRRNFLAGMIGTSATLALSTRAAPAVKKGANLRLWILKTYVAPTNKAIEASAERWAQKNGAKV
Ga0316624_1164187713300033486SoilMLNRRISRRNFLAGVVGTSATLALGTQAAPAVRKGANLRIWILKTYVAPTNKAIEDSAQRWAQ
Ga0364930_0116532_735_9113300033814SedimentMRDRRFSRRKFLAGAVGASATLALGARPAAPAVRKGTSLRLWILKTYVEPTNKAIEASA
Ga0364942_0194784_3_1493300034165SedimentMFDQRISRRSLLAGAVGTSALLTLPRPAAPAVKKGTSLRLWSLKTYVEP
Ga0373917_0066094_365_5743300034692Sediment SlurryMLDQRISRRSLLAGAAGTSALLTLPRSTRAQGPAVKKGTSLRLWILKTYVEPTNKAIEASAQRGAQKHRA


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