Metagenome / Metatranscriptome Family F035090

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035090
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	41 residues
Representative Sequence	MAPDTKHLEVTLETQVESVNLAEEMCLRVAEAAGFGEDDCY
Number of Associated Samples	142
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.24 %
% of genes near scaffold ends (potentially truncated)	98.27 %
% of genes from short scaffolds (< 2000 bps)	87.86 %
Associated GOLD sequencing projects	136
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.168 % of family members)
Environment Ontology (ENVO)	Unclassified (29.480 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.64% β-sheet: 0.00% Coil/Unstructured: 75.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF13335	Mg_chelatase_C	48.26
PF04011	LemA	6.40
PF13541	ChlI	1.74
PF07676	PD40	1.74
PF08530	PepX_C	1.16
PF01797	Y1_Tnp	1.16
PF13193	AMP-binding_C	1.16
PF13231	PMT_2	1.16
PF08241	Methyltransf_11	1.16
PF00654	Voltage_CLC	1.16
PF00535	Glycos_transf_2	1.16
PF12802	MarR_2	1.16
PF01078	Mg_chelatase	1.16
PF06827	zf-FPG_IleRS	0.58
PF16657	Malt_amylase_C	0.58
PF05711	TylF	0.58
PF12704	MacB_PCD	0.58
PF13508	Acetyltransf_7	0.58
PF07719	TPR_2	0.58
PF00324	AA_permease	0.58
PF13414	TPR_11	0.58
PF09972	DUF2207	0.58
PF14559	TPR_19	0.58
PF02566	OsmC	0.58
PF01522	Polysacc_deac_1	0.58
PF00571	CBS	0.58
PF05235	CHAD	0.58
PF00583	Acetyltransf_1	0.58
PF03551	PadR	0.58
PF06877	RraB	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	6.40
COG2936	Predicted acyl esterase	General function prediction only [R]	1.16
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.16
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	1.16
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.58
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.58
COG3076	Regulator of RNase E activity RraB	Translation, ribosomal structure and biogenesis [J]	0.58
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.58
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.58
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.58
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.58
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.58
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.58
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.58
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.58
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.58
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.24 %
Unclassified	root	N/A	16.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.24 %
Unclassified	root	N/A	16.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.24 %
Unclassified	root	N/A	16.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.93 %
Unclassified	root	N/A	16.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.58 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.65 %
Unclassified	root	N/A	16.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.62 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.65 %
Unclassified	root	N/A	16.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.05 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.65 %
Unclassified	root	N/A	16.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.05 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.65 %
Unclassified	root	N/A	16.76 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.16 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.58 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.58 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.65 %
Unclassified	root	N/A	16.76 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.58 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.58 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.58 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.58 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.65 %
Unclassified	root	N/A	16.76 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.58 %
Granulicella mallensis MP5ACTX8	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis → Granulicella mallensis MP5ACTX8	0.58 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.58 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.58 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.58 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005176\|Ga0066679_10007540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5199	Open in IMG/M
3300005180\|Ga0066685_10433215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	913	Open in IMG/M
3300005467\|Ga0070706_100322422	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005467\|Ga0070706_100823779	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005537\|Ga0070730_10191404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1368	Open in IMG/M
3300005541\|Ga0070733_10572682	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005549\|Ga0070704_101890170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005576\|Ga0066708_10639528	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005591\|Ga0070761_10473975	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300005617\|Ga0068859_101384122	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	776	Open in IMG/M
3300005712\|Ga0070764_10922225	Not Available	548	Open in IMG/M
3300005995\|Ga0066790_10533006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	502	Open in IMG/M
3300006163\|Ga0070715_10723229	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300006797\|Ga0066659_10718648	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300007076\|Ga0075435_100069757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis → Granulicella mallensis MP5ACTX8	2867	Open in IMG/M
3300007788\|Ga0099795_10345202	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300009012\|Ga0066710_100107206	All Organisms → cellular organisms → Bacteria	3760	Open in IMG/M
3300009038\|Ga0099829_10719134	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300009088\|Ga0099830_10041978	All Organisms → cellular organisms → Bacteria → Acidobacteria	3177	Open in IMG/M
3300009088\|Ga0099830_11876588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009089\|Ga0099828_10088245	All Organisms → cellular organisms → Bacteria → Acidobacteria	2661	Open in IMG/M
3300009089\|Ga0099828_11268093	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300009137\|Ga0066709_101488422	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300009174\|Ga0105241_12700514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009621\|Ga0116116_1067382	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300009629\|Ga0116119_1128540	Not Available	633	Open in IMG/M
3300010048\|Ga0126373_10526041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1228	Open in IMG/M
3300010048\|Ga0126373_11838215	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300010303\|Ga0134082_10327410	Not Available	645	Open in IMG/M
3300010343\|Ga0074044_10444479	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300010359\|Ga0126376_11428365	Not Available	718	Open in IMG/M
3300010359\|Ga0126376_11484813	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300010359\|Ga0126376_11646792	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300010359\|Ga0126376_12096325	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300010361\|Ga0126378_10662682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300010361\|Ga0126378_11564604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300011269\|Ga0137392_10639507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	882	Open in IMG/M
3300011270\|Ga0137391_10075886	All Organisms → cellular organisms → Bacteria → Acidobacteria	2892	Open in IMG/M
3300011271\|Ga0137393_10132909	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300011271\|Ga0137393_10405957	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300011271\|Ga0137393_10711914	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300012096\|Ga0137389_10013811	All Organisms → cellular organisms → Bacteria	5483	Open in IMG/M
3300012096\|Ga0137389_11496039	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012189\|Ga0137388_11735232	Not Available	558	Open in IMG/M
3300012202\|Ga0137363_11389578	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300012203\|Ga0137399_10201451	Not Available	1616	Open in IMG/M
3300012203\|Ga0137399_11272659	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012207\|Ga0137381_11568892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012207\|Ga0137381_11775737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012209\|Ga0137379_10350572	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300012209\|Ga0137379_11380212	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300012210\|Ga0137378_11493759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012349\|Ga0137387_10701126	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012356\|Ga0137371_10236741	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300012357\|Ga0137384_10386115	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300012361\|Ga0137360_10007363	All Organisms → cellular organisms → Bacteria	6825	Open in IMG/M
3300012582\|Ga0137358_10630518	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300012683\|Ga0137398_10670429	Not Available	720	Open in IMG/M
3300012917\|Ga0137395_10169894	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300012923\|Ga0137359_11125001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300012924\|Ga0137413_11494724	Not Available	549	Open in IMG/M
3300012925\|Ga0137419_11125982	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012929\|Ga0137404_11291307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300012929\|Ga0137404_11670478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300012930\|Ga0137407_10819073	Not Available	879	Open in IMG/M
3300012931\|Ga0153915_13497856	Not Available	508	Open in IMG/M
3300012948\|Ga0126375_11604045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012957\|Ga0164303_10194440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300012964\|Ga0153916_13168373	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300012972\|Ga0134077_10484492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300013503\|Ga0120127_10092464	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300014151\|Ga0181539_1046404	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300014166\|Ga0134079_10289417	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300015052\|Ga0137411_1295149	All Organisms → cellular organisms → Bacteria	8932	Open in IMG/M
3300015052\|Ga0137411_1295149	All Organisms → cellular organisms → Bacteria	8932	Open in IMG/M
3300015054\|Ga0137420_1427957	All Organisms → cellular organisms → Bacteria	3679	Open in IMG/M
3300015264\|Ga0137403_10136787	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300015264\|Ga0137403_11213002	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300015371\|Ga0132258_13184504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300016294\|Ga0182041_12049964	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300016319\|Ga0182033_11511913	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300016357\|Ga0182032_10772059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300016445\|Ga0182038_11364367	Not Available	635	Open in IMG/M
3300017823\|Ga0187818_10298500	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300017823\|Ga0187818_10581416	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300017929\|Ga0187849_1062571	All Organisms → cellular organisms → Bacteria → Acidobacteria	1685	Open in IMG/M
3300017930\|Ga0187825_10059309	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300017934\|Ga0187803_10126629	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300017943\|Ga0187819_10760430	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300017947\|Ga0187785_10083203	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300018007\|Ga0187805_10428746	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300018023\|Ga0187889_10116041	Not Available	1304	Open in IMG/M
3300018030\|Ga0187869_10377241	Not Available	677	Open in IMG/M
3300018032\|Ga0187788_10146836	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300018058\|Ga0187766_10296105	Not Available	1047	Open in IMG/M
3300018433\|Ga0066667_10120438	Not Available	1792	Open in IMG/M
3300020580\|Ga0210403_10259845	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300020581\|Ga0210399_10260554	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300020581\|Ga0210399_10887858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300020581\|Ga0210399_11402032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300020582\|Ga0210395_11366153	Not Available	517	Open in IMG/M
3300020583\|Ga0210401_10683499	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300020583\|Ga0210401_11430049	Not Available	549	Open in IMG/M
3300021088\|Ga0210404_10368191	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300021168\|Ga0210406_10591448	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300021168\|Ga0210406_11022187	Not Available	614	Open in IMG/M
3300021180\|Ga0210396_10719376	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300021180\|Ga0210396_11635352	Not Available	525	Open in IMG/M
3300021432\|Ga0210384_10059974	Not Available	3439	Open in IMG/M
3300021432\|Ga0210384_11680604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021475\|Ga0210392_11426090	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300021478\|Ga0210402_10428162	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300021479\|Ga0210410_10227329	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300022533\|Ga0242662_10274098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300024288\|Ga0179589_10230258	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300024310\|Ga0247681_1047138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025469\|Ga0208687_1025059	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300025916\|Ga0207663_11195573	Not Available	612	Open in IMG/M
3300025916\|Ga0207663_11401712	Not Available	563	Open in IMG/M
3300026088\|Ga0207641_11938988	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300026285\|Ga0209438_1139873	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300026319\|Ga0209647_1195043	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300026374\|Ga0257146_1079597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300026482\|Ga0257172_1075188	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300026515\|Ga0257158_1050613	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300026548\|Ga0209161_10032061	All Organisms → cellular organisms → Bacteria	3614	Open in IMG/M
3300026551\|Ga0209648_10454642	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300026551\|Ga0209648_10549756	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300026552\|Ga0209577_10247975	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300026557\|Ga0179587_10176791	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300026890\|Ga0207781_1008987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1087	Open in IMG/M
3300026896\|Ga0207730_1016747	Not Available	624	Open in IMG/M
3300026941\|Ga0207741_1004453	All Organisms → cellular organisms → Bacteria → Acidobacteria	1725	Open in IMG/M
3300027645\|Ga0209117_1195607	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300027674\|Ga0209118_1092375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300027738\|Ga0208989_10230594	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300027846\|Ga0209180_10742923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300027855\|Ga0209693_10410887	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300027855\|Ga0209693_10548491	Not Available	549	Open in IMG/M
3300027862\|Ga0209701_10398930	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300027862\|Ga0209701_10738585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300027875\|Ga0209283_10912563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300027903\|Ga0209488_11011651	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300027905\|Ga0209415_10113098	All Organisms → cellular organisms → Bacteria	2907	Open in IMG/M
3300028138\|Ga0247684_1088669	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300028146\|Ga0247682_1077099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300031040\|Ga0265754_1022444	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300031231\|Ga0170824_111982563	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300031549\|Ga0318571_10307356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031573\|Ga0310915_11234268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300031640\|Ga0318555_10021936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3013	Open in IMG/M
3300031708\|Ga0310686_119199271	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031720\|Ga0307469_10940327	Not Available	803	Open in IMG/M
3300031736\|Ga0318501_10306192	Not Available	849	Open in IMG/M
3300031744\|Ga0306918_10489841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300031753\|Ga0307477_11048632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031754\|Ga0307475_10489069	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300031819\|Ga0318568_10841210	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300031823\|Ga0307478_11304882	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300031912\|Ga0306921_10216344	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300031947\|Ga0310909_10226211	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300031962\|Ga0307479_10679441	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300031962\|Ga0307479_11423891	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300032089\|Ga0318525_10688662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300032091\|Ga0318577_10341324	Not Available	716	Open in IMG/M
3300032180\|Ga0307471_102270887	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300032180\|Ga0307471_103303910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300032205\|Ga0307472_101193918	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300032205\|Ga0307472_102227723	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300032261\|Ga0306920_102853180	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300032782\|Ga0335082_10094140	Not Available	2981	Open in IMG/M
3300032897\|Ga0335071_10339404	Not Available	1455	Open in IMG/M
3300033402\|Ga0326728_10146679	All Organisms → cellular organisms → Bacteria	2579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.11%
Host-Associated	Host-Associated	2.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.44%
Aquatic	Environmental → Aquatic	8.67%
Plants	Host-Associated → Plants	2.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.86%
Freshwater	Environmental → Aquatic → Freshwater	8.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.16%
Peat	Environmental → Terrestrial → Peat	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.57%
Loam	Environmental → Terrestrial → Soil → Loam	9.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.47%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.16%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.58%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.05%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.47%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.16%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.58%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.58%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.58%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.58%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.58%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066679_100075401	3300005176	Soil	MALNTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRI
Ga0066685_104332152	3300005180	Soil	MTTETKHLEVTLDTQVESVNLAEEMCLRVAEAIGFGEDDCYRIG
Ga0070706_1003224222	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAPDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDC*
Ga0070706_1008237791	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VADEHMAQDNKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEVCYRIGM
Ga0070730_101914041	3300005537	Surface Soil	MGTDPKHLEITLETQVESVNLAEEMCLRVAEAAGFGED
Ga0070733_105726821	3300005541	Surface Soil	MGKDPKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYK
Ga0070704_1018901702	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAQENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEMC
Ga0066708_106395282	3300005576	Soil	MASGEKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIG
Ga0070761_104739752	3300005591	Soil	MGTDPKHLEVTLETQVESVNLAEEMCLRVAEAAGFGE
Ga0068859_1013841221	3300005617	Switchgrass Rhizosphere	MAQDENKHLEVVLDTQVESVNLAEEMCLRVAEAAGF
Ga0070764_109222251	3300005712	Soil	MAPDTKHLEVTLDTHVESVNVAEEMCLRVAESAGFGEDDCYRI
Ga0066790_105330061	3300005995	Soil	MAPDDKHLEVTLDTHVESVNLAEEMCLRVAEKAGFGEDDCYRIGM
Ga0070715_107232291	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MAQDNKHLAVVLDTQVESVNLAEEMCLRVAEAAGFDEEMCYRIGMSV
Ga0066659_107186481	3300006797	Soil	MALTTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIG
Ga0075435_1000697573	3300007076	Populus Rhizosphere	MAPENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDE
Ga0099795_103452022	3300007788	Vadose Zone Soil	MTQDSKHLEVTLETQVESVNLAEEMCLRVAEAAGFGE
Ga0066710_1001072066	3300009012	Grasslands Soil	MAPETKHLEITLETQVESVNLAEEMCLRVADAAGFGED
Ga0099829_107191342	3300009038	Vadose Zone Soil	MASNAKHLEMTLETIVESVNLAEEMCLRVAEAAGFGE
Ga0099830_100419783	3300009088	Vadose Zone Soil	MASDIKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGMS
Ga0099830_118765882	3300009088	Vadose Zone Soil	MAEDNKHLEVVLDTQVESVNLAEEMCLRVAESAGFDEE
Ga0099828_100882451	3300009089	Vadose Zone Soil	MASDTKHLKITLETQVESVNLAEEMCLRVAEAAGFG
Ga0099828_112680932	3300009089	Vadose Zone Soil	MAPETKHLEITLETQVDSVNLAEEMCLRVAEAAGFG
Ga0066709_1014884222	3300009137	Grasslands Soil	MASETKHLEMTLETIVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0105241_127005141	3300009174	Corn Rhizosphere	MAQENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEMCYRI
Ga0116116_10673821	3300009621	Peatland	MAPDTKHLEVTLDTHVESVNLAEEMCLRVAEAAGFAEDECYRIGMS
Ga0116119_11285401	3300009629	Peatland	MAPDTKHLEVILDTHVESVNLAEEMCLRVAEAAGFAEDECYRIGMSV
Ga0126373_105260413	3300010048	Tropical Forest Soil	MAQDNRHLEVVLDTQVESVNLAEEMCLKVAEAAGFDEEMCYRIGM
Ga0126373_118382152	3300010048	Tropical Forest Soil	MADDNKHLEVVLDTQVESVNLAEEMCLHVAEAAGF
Ga0134082_103274102	3300010303	Grasslands Soil	MALTTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGM
Ga0074044_104444792	3300010343	Bog Forest Soil	MAPDTKHLEVILDTHVESVNLAEEMCLRVAEAAGFAEDECY
Ga0126376_114283651	3300010359	Tropical Forest Soil	MTDENKHLEVTLETQVESVNLAEEMCLRVAEAAGFGED
Ga0126376_114848132	3300010359	Tropical Forest Soil	MTASAKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGMSV
Ga0126376_116467922	3300010359	Tropical Forest Soil	MAPETKHLEVTLETQVESVNLAEEMCLRLAEAAGFGE
Ga0126376_120963251	3300010359	Tropical Forest Soil	MTPKTKHLEVTLDTEVESVNVAEAMCLRVAEAAGFGE
Ga0126378_106626821	3300010361	Tropical Forest Soil	MAPETKHLEVTLDNHVESVNLAEEMCVRVAEASGFNEDECYR
Ga0126378_115646041	3300010361	Tropical Forest Soil	MAQENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEMCYRIGM
Ga0137392_106395072	3300011269	Vadose Zone Soil	MASEIKHLEMTLETIVESVNLAEEMCLRVAEAAGFGEDDCYRI
Ga0137391_100758861	3300011270	Vadose Zone Soil	MASDTKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0137393_101329091	3300011271	Vadose Zone Soil	MAPDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0137393_104059572	3300011271	Vadose Zone Soil	MASNAKHLEMTLETIVESVNLAEEMCLRVAEAAGFGEDDC
Ga0137393_107119142	3300011271	Vadose Zone Soil	MPQDTKHLEVTLETQVDSVNLAEEMCLRVAEAAGFGED
Ga0137389_100138116	3300012096	Vadose Zone Soil	MASDTKHLEITLETQVESVNLAEEMCLRVAEAAGFGE
Ga0137389_114960392	3300012096	Vadose Zone Soil	MSEDSRHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIG
Ga0137388_117352322	3300012189	Vadose Zone Soil	MASDAKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0137363_113895781	3300012202	Vadose Zone Soil	MALTTKHLEMTLETQVESVNLAEEMCLRVAKAAGFGEDDCYRIGMSV
Ga0137399_102014512	3300012203	Vadose Zone Soil	MASDTKHLEVTLETQVESVNLAEELCLRVAEAAGFGEDDC
Ga0137399_112726592	3300012203	Vadose Zone Soil	MASYTKHLEMTLETQVESVNLAEAMCLRVAEAAGFGEEDC*
Ga0137381_115688922	3300012207	Vadose Zone Soil	MVSNTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCY
Ga0137381_117757371	3300012207	Vadose Zone Soil	MQAVFEVADQHMAQDNKHLEVVLDTQVESVNLAEEMCLRVAEAAGF
Ga0137379_103505721	3300012209	Vadose Zone Soil	VDGFARGSGLRMAPDNKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGMSV
Ga0137379_113802122	3300012209	Vadose Zone Soil	MASEIKHLEMTLETHVESVNLAEEMCLRVAEAAGFGEDDCYRIGM
Ga0137378_114937591	3300012210	Vadose Zone Soil	MSSDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIG
Ga0137387_107011261	3300012349	Vadose Zone Soil	MASETKHLEMTLETIVESVNLAEEMCLRVAEAAGFGEDD
Ga0137371_102367411	3300012356	Vadose Zone Soil	MQAVFVVADQHMAQDNKHLEVVLDTQVESVNLAEEMCLRVAE
Ga0137384_103861151	3300012357	Vadose Zone Soil	MVSNTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGE
Ga0137360_1000736311	3300012361	Vadose Zone Soil	MASDTKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCY
Ga0137358_106305182	3300012582	Vadose Zone Soil	VTPERKHLEVTLETQVESVNLAEEMCLRVAEAAGFGEDECYR
Ga0137398_106704291	3300012683	Vadose Zone Soil	MASYTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0137395_101698941	3300012917	Vadose Zone Soil	MAEDNKHLEVVLDTQVESVNLAEEMCLRVAESAGFDEEMCYRIGM
Ga0137359_111250011	3300012923	Vadose Zone Soil	LLVADKHMAQDNKHMEVVLDTQVESVNLAEEMCLRVAEAAGFDEEV
Ga0137413_114947241	3300012924	Vadose Zone Soil	MAPETKHLEVTLDTHVESVNLAEEMCVRVAEAAGFNEDECYRIGMSV
Ga0137419_111259822	3300012925	Vadose Zone Soil	VTPERNHLEVTLETQVESVNLAEEMCLRVAEAAGFGEDD*
Ga0137404_112913072	3300012929	Vadose Zone Soil	LLVADKHMAQDNKHMEVVLDTQVESVNLAEEMCLRVAEAAGFDE
Ga0137404_116704782	3300012929	Vadose Zone Soil	LQVADEHMAQDNKHMEVVLDTQVESVNLAEEMCLRVAEAA
Ga0137407_108190731	3300012930	Vadose Zone Soil	LLVADKHMAQDNKHMEVVLDTQVESVNLAEEMCLRVAEAA
Ga0153915_134978561	3300012931	Freshwater Wetlands	MEPESKHLELTLQTKVESVSLAEEACLRVAEAAGFGE
Ga0126375_116040452	3300012948	Tropical Forest Soil	MAQENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFD
Ga0164303_101944401	3300012957	Soil	MVEENKHLEVVLDTQVESVNLAEEMCLRVAEAAGF
Ga0153916_131683732	3300012964	Freshwater Wetlands	MEPDSKHLELTLQTKVESVSLAEEACLRVAEAAGFGEDECYRI
Ga0134077_104844922	3300012972	Grasslands Soil	MASETKHLEMTLETIVESVNLAEEMCLRVAEAAGF
Ga0120127_100924642	3300013503	Permafrost	MADPKQLDVTLETQVESVNLAEEMCLRVAEAAGLE
Ga0181539_10464041	3300014151	Bog	MAPDTKHLEVTLDTQVESVNLAEEMCLRVAEAAGFAE
Ga0134079_102894172	3300014166	Grasslands Soil	MASGDKHLEITLETQVESVNLAEEMCLRVAEAAGFGED
Ga0137411_12951491	3300015052	Vadose Zone Soil	MASDAKHLEITLETQVESVNLAEELCLRVAEAAGFGEDDCYRIGMSL
Ga0137411_129514915	3300015052	Vadose Zone Soil	MASDAKHLEITLETRSRASICRELCLRVAEAAVREDDCYRIGM
Ga0137420_14279571	3300015054	Vadose Zone Soil	MTQDSKHLEVTLETQVESVNLAEEMCLRVAEAARFGEDD
Ga0137403_101367875	3300015264	Vadose Zone Soil	MAFNTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0137403_112130021	3300015264	Vadose Zone Soil	MAPETKHLEVTFETQVESVNLAEEMCLRLAEAAGFGEDECYRIGMS
Ga0132258_131845041	3300015371	Arabidopsis Rhizosphere	MAQDEKKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEMCYRIGM
Ga0182041_120499642	3300016294	Soil	MAPDTKHLEVTLDTHVESVNLAEEMCVRVAEAVGFN
Ga0182033_115119132	3300016319	Soil	MTPEAKHLEVVLDTHVESVNLAEEMCLRVAEAVGF
Ga0182032_107720592	3300016357	Soil	MAQEKKHLEVLLDTQVESVNLAEEMCIRVAEAAGFDEEMCYRIGM
Ga0182038_113643671	3300016445	Soil	MTPQAKHLVVILDTHVESVNLAEEMCLRVAEAVGFSEDECYRIGMS
Ga0187818_102985001	3300017823	Freshwater Sediment	MGTDPKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYKIGM
Ga0187818_105814161	3300017823	Freshwater Sediment	MAPETKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYRI
Ga0187849_10625713	3300017929	Peatland	MAPDTKHLEVTLDTHVESVNLAEEMCLRVAEAAGFAEDECYRIGMSV
Ga0187825_100593091	3300017930	Freshwater Sediment	MGTDPKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYKIG
Ga0187803_101266291	3300017934	Freshwater Sediment	MAPDTKHLEVLLDTQVESVNLAEEMCLRVAEAAGFAEDECYRIGMS
Ga0187819_107604301	3300017943	Freshwater Sediment	MTPEAKHLEVVLDTHVESVNLAEEMCLRVAEAVGFNEDECYRIGM
Ga0187785_100832033	3300017947	Tropical Peatland	MTPQAKHLEVILDTHVESVNLAEEMCLRVAEAVGFTE
Ga0187805_104287461	3300018007	Freshwater Sediment	MTPEAKHLEVVLDTNVESVNLAEEMCLRVAEAVGFSEDECYRIGM
Ga0187889_101160411	3300018023	Peatland	MAPDTKHLEVTLDTHVESVNLAEEMCLRVAEAAGFAE
Ga0187869_103772411	3300018030	Peatland	MAPDTKHLEVILDTHVESVNLAEEMCLRVAEAAGFAEDECYRIGM
Ga0187788_101468361	3300018032	Tropical Peatland	MAPETKHLEVTLETQVESVNLAEEMCLRVAEAAGFGE
Ga0187766_102961052	3300018058	Tropical Peatland	MTPEAKHLEVILDTHVESVNLAEEMCLRVAEAVGFSEDECY
Ga0066667_101204381	3300018433	Grasslands Soil	MALNTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIG
Ga0210403_102598451	3300020580	Soil	MASDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGMS
Ga0210399_102605542	3300020581	Soil	MGTDPKHLEVTLETQVESVNLAEEMCLRVAEAAGFGEDD
Ga0210399_108878581	3300020581	Soil	MAPDTKHLEVTLETQVESVNVAEEMCLRVAEAAGFGEDDC
Ga0210399_114020321	3300020581	Soil	MTPETKHLEVTLQTQVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0210395_113661531	3300020582	Soil	MGTDPKHLEITLETQVESVNLAEEMCIRVAEAAGFGEDDCYKIG
Ga0210401_106834992	3300020583	Soil	MAPDTKHLEVTLETHVESVNLAEEMCLRVAESAGFGEDDCY
Ga0210401_114300492	3300020583	Soil	MADQKHLDVTLDTQVESVNLAEEMCLRVAEAAGFDE
Ga0210404_103681912	3300021088	Soil	MASDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDC
Ga0210406_105914481	3300021168	Soil	MASETKHLEVTLDTHVESVNLAEEMCVRVAEAAGFNEDECYRIGM
Ga0210406_110221872	3300021168	Soil	MAPETKHLGVTLDTHVESVNLAEEMCVRVAEASGFNEDE
Ga0210396_107193761	3300021180	Soil	MPQDSKHLEVTLETQVESVNLAEEMCLRVAEAAGFGEDDCY
Ga0210396_116353522	3300021180	Soil	MGTDPKHLEITLETQVESVNLAEEMCIRVAEAAGFGEDDC
Ga0210384_100599741	3300021432	Soil	MGSDNKHLEVTLETQVESVNLAEEMCLRMAEAAGFGEDDC
Ga0210384_116806041	3300021432	Soil	MSEDSKHLEMTLETQVESVNLAEEMCLRVAEAAGF
Ga0210392_114260901	3300021475	Soil	MAPDTKHLEVTLDTHVESVNVAEEMCLRVAESAGFGEDDCYRIGMS
Ga0210402_104281621	3300021478	Soil	MGTDPKHLEITLETQVESVNLAEEMCLRVAEAAGFG
Ga0210410_102273293	3300021479	Soil	MGTDPKHLEITLETQVESVNLAEEMCLRVAEAAGF
Ga0242662_102740982	3300022533	Soil	MAFNTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGM
Ga0179589_102302581	3300024288	Vadose Zone Soil	MAQDNKHLEVVLDTQVESVNLAEEMCLRVAESAGFDEEM
Ga0247681_10471382	3300024310	Soil	MAPETKHLEVTLDTHVESVNLAEEMCVRVAEAAGFSEDECY
Ga0208687_10250593	3300025469	Peatland	MAPDTKHLEVTLDTHVESVNLAEEMCLRVAEAAGFAEDE
Ga0207663_111955732	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAPETKHLEVTLDTHVESVNLAEEMCLRVAEAAGFGE
Ga0207663_114017121	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAQDNKHLAVVLDTQVESVNLAEEMCLRVAEAAGFDEEMCYRIG
Ga0207641_119389882	3300026088	Switchgrass Rhizosphere	MAAETKHLEVTLETQVESVNVAEEMCLRVAESAGFG
Ga0209438_11398731	3300026285	Grasslands Soil	MTQDSKHMEVTLETQVESVNLAEEMCLRVAEAAGFGEDD
Ga0209647_11950431	3300026319	Grasslands Soil	MASDIKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDC
Ga0257146_10795971	3300026374	Soil	MASDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDD
Ga0257172_10751881	3300026482	Soil	MASDAKHLEITLETQVESVNLAEELCLRVAEAAGFGEDDCYRI
Ga0257158_10506131	3300026515	Soil	MAADTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGE
Ga0209161_100320613	3300026548	Soil	MALNTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGMS
Ga0209648_104546421	3300026551	Grasslands Soil	MASNAKHLEMTLETIVESVNLAEEMCLRVAEAAGFGED
Ga0209648_105497561	3300026551	Grasslands Soil	VTPERKHLEVTLETQVESVNLAEEMCLRVAEAAGFGED
Ga0209577_102479751	3300026552	Soil	MALTTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGMS
Ga0179587_101767911	3300026557	Vadose Zone Soil	MASDTKHLEMTLETIVESVNLAEEMCLRVAEAAGFGEDDC
Ga0207781_10089873	3300026890	Tropical Forest Soil	MTPQAKHLEVILDTHVESVNLAEEMCLRVAEAIGFSED
Ga0207730_10167471	3300026896	Tropical Forest Soil	MTPETKHLEVTLDTHVESVNLAEEMCLRVAEAAGFGED
Ga0207741_10044534	3300026941	Tropical Forest Soil	MTPEAKHLEVVLDTHVESVNLAEEMCLRVAEAVGFN
Ga0209117_11956072	3300027645	Forest Soil	MAPDTKHLEVTLETQVESVNVAEEMCLRVAEAAGFGEDD
Ga0209118_10923752	3300027674	Forest Soil	MASDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGED
Ga0208989_102305942	3300027738	Forest Soil	MASDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCY
Ga0209180_107429232	3300027846	Vadose Zone Soil	MASEIKHLEMTLETHVESVNLAEEMCLRVAEAAGFGEDDCYR
Ga0209693_104108872	3300027855	Soil	MGTDPKHLEITLETQVESVNLAEEMCIRVAEAAGFGED
Ga0209693_105484913	3300027855	Soil	MGTDPKHLEITLETQVESVNLAEEMCLRVAEAAGFGE
Ga0209701_103989302	3300027862	Vadose Zone Soil	MSEDSKHLEITLETQVESVNLAEEMCLRVAEAAGFGE
Ga0209701_107385852	3300027862	Vadose Zone Soil	MALETKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIG
Ga0209283_109125631	3300027875	Vadose Zone Soil	MASDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGM
Ga0209488_110116512	3300027903	Vadose Zone Soil	MASDTKHLEMTLETQVESVNLAEEMCLRVAEAAGF
Ga0209415_101130984	3300027905	Peatlands Soil	MAPDTKHLEVTLDTHVESVNLAEEMCLRVAEAAGFA
Ga0247684_10886691	3300028138	Soil	MAEDTKHLEVTLETQVESVNLAEEMCLRLAEAAGFG
Ga0247682_10770991	3300028146	Soil	MAQDENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEM
Ga0265754_10224442	3300031040	Soil	MGTDPKHLEITLETQVESVNLAEEMCIRVAESAGFGEDDCYKIGM
Ga0170824_1119825631	3300031231	Forest Soil	MTQDNKHLEVVLDTQVESVNLAEEMCLKVAESAGFDEEMC
Ga0318571_103073562	3300031549	Soil	MAPENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEMCYRIGMS
Ga0310915_112342682	3300031573	Soil	MAPENKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEM
Ga0318555_100219361	3300031640	Soil	MTAGAKHLEITLETQVESVNLAEEMCLRVAEAAGFGEDD
Ga0310686_1191992711	3300031708	Soil	MGRMAPETKHLEVTLETHVESVNLAEEMCLRVAESAGFGED
Ga0307469_109403271	3300031720	Hardwood Forest Soil	MAQDNKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEVC
Ga0318501_103061921	3300031736	Soil	MTPEAKHLEVVLDTHVESVNLAEEMCLRVAEAVGFNEDECY
Ga0306918_104898412	3300031744	Soil	MAQEKKHLEVLLDTQVESVNLAEEMCIRVAEAAGFDEEMCYRIGMSV
Ga0307477_110486321	3300031753	Hardwood Forest Soil	MASDTKHLEITLETQVESVNLAEEMCLRVAEAAGFG
Ga0307475_104890691	3300031754	Hardwood Forest Soil	MTQDNKHLEVVLDTRVESVNLAEEMCLRVAESAGFDE
Ga0318568_108412101	3300031819	Soil	MTPQAKHLEVILDTHVESVNLAEEMCLRVAEAVGFSEDECY
Ga0307478_113048822	3300031823	Hardwood Forest Soil	MAEDSKHLEVTLETQVESVNLAEEMCLRVAEAAGFGE
Ga0306921_102163441	3300031912	Soil	MTAGAKHLEITLETQVESVNLAEEMCLRVAEAAGVGEDDCYRIGMS
Ga0310909_102262111	3300031947	Soil	MTPEAKHLEVVLDTHVESVNLAEEMCLRVAEAVGFNEDECYRI
Ga0307479_106794412	3300031962	Hardwood Forest Soil	MAPDTKHLEVTLETQVESVNLAEEMCLRVAEAAGFGEDDCY
Ga0307479_114238912	3300031962	Hardwood Forest Soil	MASDTKHLEMTLETIVESVNLAEEMCLRVAEAAGFGE
Ga0318525_106886621	3300032089	Soil	MAQEKKHLEVVLDTQVESVNLAEEMCLRVAEAAGFDEEMCYR
Ga0318577_103413241	3300032091	Soil	MTPQAKHLEVILDTHVESVNLAEEMCLRVAEAVGFSEDECYRIGM
Ga0307471_1022708871	3300032180	Hardwood Forest Soil	MAPDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDDCYRIGM
Ga0307471_1033039101	3300032180	Hardwood Forest Soil	MAPDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGEDD
Ga0307472_1011939182	3300032205	Hardwood Forest Soil	MATDPKHLEITLETQVESVNLAEEMCLRVAEAAGF
Ga0307472_1022277231	3300032205	Hardwood Forest Soil	MAPDTKHLEMTLETQVESVNLAEEMCLRVAEAAGFGED
Ga0306920_1028531802	3300032261	Soil	MAPEAKHLEVVLDTHVESVNLAEEMCLRVAEAVGFNEDECYRIGMSV
Ga0335082_100941404	3300032782	Soil	MAPETKHLEVTLDTHVESVNLAEEMCVRVAEAAGFNEDECYRIGM
Ga0335071_103394043	3300032897	Soil	MTPQAKHLEVILDTHVESVNLAEEMCLRVAEAVGFSEDECYRIGMSV
Ga0326728_101466793	3300033402	Peat Soil	MAPETKHLEVILDTHVESVNLAEEMCLRVAEAAGFAEDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035090

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences