Metagenome Family F035036

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035036
Family Type	Metagenome
Number of Sequences	173
Average Sequence Length	51 residues
Representative Sequence	MTMWAEQLPATTAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
Number of Associated Samples	129
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.88 %
% of genes near scaffold ends (potentially truncated)	35.26 %
% of genes from short scaffolds (< 2000 bps)	84.97 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.971 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.231 % of family members)
Environment Ontology (ENVO)	Unclassified (31.214 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.225 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.10% β-sheet: 0.00% Coil/Unstructured: 43.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF03401	TctC	51.45
PF03649	UPF0014	8.67
PF12697	Abhydrolase_6	5.20
PF01925	TauE	1.73
PF09722	Xre_MbcA_ParS_C	1.73
PF00005	ABC_tran	1.73
PF01436	NHL	1.16
PF03466	LysR_substrate	0.58
PF01042	Ribonuc_L-PSP	0.58
PF13493	DUF4118	0.58
PF00126	HTH_1	0.58
PF04055	Radical_SAM	0.58
PF13437	HlyD_3	0.58
PF11949	DUF3466	0.58
PF04392	ABC_sub_bind	0.58
PF10101	DUF2339	0.58
PF07883	Cupin_2	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	51.45
COG0390	ABC-type iron transport system FetAB, permease component	Inorganic ion transport and metabolism [P]	8.67
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.73
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.58
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.73 %
Unclassified	root	N/A	15.03 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.16 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.21 %
Unclassified	root	N/A	15.03 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	1.16 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.18 %
Unclassified	root	N/A	15.03 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.25 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.58 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.51 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.73 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.58 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.58 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.58 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.25 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.51 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.16 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.58 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.58 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.58 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.58 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.25 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.16 %
Mesorhizobium alhagi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium alhagi	0.58 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.58 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.58 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.58 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.58 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.58 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.25 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.16 %
Microvirga sp. BSC39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. BSC39	0.58 %
Mesorhizobium alhagi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium alhagi	0.58 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.58 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.58 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.58 %
Nitrospirae bacterium 13_2_20CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	0.58 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16736357	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig1205155	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0812775	Not Available	789	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1024538	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300001545\|JGI12630J15595_10102247	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300001867\|JGI12627J18819_10026174	All Organisms → cellular organisms → Bacteria	2400	Open in IMG/M
3300001867\|JGI12627J18819_10146853	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300002245\|JGIcombinedJ26739_100266463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1600	Open in IMG/M
3300002906\|JGI25614J43888_10004092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4610	Open in IMG/M
3300002917\|JGI25616J43925_10045899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1903	Open in IMG/M
3300004479\|Ga0062595_100080763	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300004479\|Ga0062595_100738427	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300004633\|Ga0066395_10039101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2033	Open in IMG/M
3300005147\|Ga0066821_1005885	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300005148\|Ga0066819_1028500	Not Available	501	Open in IMG/M
3300005174\|Ga0066680_10075107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2030	Open in IMG/M
3300005177\|Ga0066690_10112549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1760	Open in IMG/M
3300005332\|Ga0066388_100524012	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300005332\|Ga0066388_100525505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1816	Open in IMG/M
3300005332\|Ga0066388_101236801	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005332\|Ga0066388_104150833	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005332\|Ga0066388_104330342	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300005332\|Ga0066388_104801798	Not Available	687	Open in IMG/M
3300005332\|Ga0066388_104857925	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300005332\|Ga0066388_105695593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300005332\|Ga0066388_107293932	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005434\|Ga0070709_10042198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2815	Open in IMG/M
3300005437\|Ga0070710_10117020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1608	Open in IMG/M
3300005445\|Ga0070708_100032405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4533	Open in IMG/M
3300005445\|Ga0070708_100120169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2423	Open in IMG/M
3300005445\|Ga0070708_100283167	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300005467\|Ga0070706_100180767	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300005518\|Ga0070699_100122011	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300005536\|Ga0070697_101259208	Not Available	659	Open in IMG/M
3300005546\|Ga0070696_100322011	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005764\|Ga0066903_101294172	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005764\|Ga0066903_102392818	Not Available	1021	Open in IMG/M
3300005764\|Ga0066903_103556178	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005764\|Ga0066903_105287259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300005764\|Ga0066903_108498247	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300006028\|Ga0070717_10691756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	926	Open in IMG/M
3300006173\|Ga0070716_101851243	Not Available	501	Open in IMG/M
3300006175\|Ga0070712_100873503	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300006175\|Ga0070712_101243206	Not Available	648	Open in IMG/M
3300006794\|Ga0066658_10543520	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006797\|Ga0066659_10483845	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	989	Open in IMG/M
3300006845\|Ga0075421_102529211	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006852\|Ga0075433_10826966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300006854\|Ga0075425_100604162	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300006904\|Ga0075424_100655707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1121	Open in IMG/M
3300006904\|Ga0075424_101503416	Not Available	715	Open in IMG/M
3300007076\|Ga0075435_101774052	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300009012\|Ga0066710_100624656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1636	Open in IMG/M
3300009089\|Ga0099828_10810168	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300009090\|Ga0099827_10961598	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300009143\|Ga0099792_10799292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300009162\|Ga0075423_10549759	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300009792\|Ga0126374_10449918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300009792\|Ga0126374_10609282	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300009792\|Ga0126374_11675046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300010046\|Ga0126384_10568757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300010046\|Ga0126384_10757132	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010358\|Ga0126370_10149367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1701	Open in IMG/M
3300010360\|Ga0126372_10154146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1841	Open in IMG/M
3300010360\|Ga0126372_10981782	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300010361\|Ga0126378_12637889	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010366\|Ga0126379_12651004	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300010396\|Ga0134126_12456038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300010863\|Ga0124850_1003154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4947	Open in IMG/M
3300010863\|Ga0124850_1011208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2850	Open in IMG/M
3300012096\|Ga0137389_11705568	Not Available	526	Open in IMG/M
3300012180\|Ga0153974_1184177	Not Available	501	Open in IMG/M
3300012198\|Ga0137364_10977077	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012199\|Ga0137383_10123635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1889	Open in IMG/M
3300012199\|Ga0137383_11008787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium alhagi	606	Open in IMG/M
3300012200\|Ga0137382_11194134	Not Available	541	Open in IMG/M
3300012202\|Ga0137363_11316353	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300012208\|Ga0137376_10441662	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300012357\|Ga0137384_10234806	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300012361\|Ga0137360_10331792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1270	Open in IMG/M
3300012361\|Ga0137360_11148614	Not Available	671	Open in IMG/M
3300012582\|Ga0137358_10101521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1948	Open in IMG/M
3300012917\|Ga0137395_10121840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1758	Open in IMG/M
3300012918\|Ga0137396_10939322	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300012923\|Ga0137359_10617650	Not Available	950	Open in IMG/M
3300012923\|Ga0137359_10815503	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300012948\|Ga0126375_10376795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1017	Open in IMG/M
3300012951\|Ga0164300_10049854	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300012951\|Ga0164300_10663500	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012958\|Ga0164299_10144561	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300012958\|Ga0164299_11094406	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012960\|Ga0164301_10257374	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300012961\|Ga0164302_10147446	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300012961\|Ga0164302_11485270	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300012971\|Ga0126369_10073080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. BSC39	3015	Open in IMG/M
3300012971\|Ga0126369_12543740	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012984\|Ga0164309_10882437	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300012986\|Ga0164304_10293247	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300016319\|Ga0182033_10527185	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300016319\|Ga0182033_12019268	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300016387\|Ga0182040_10897932	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300016422\|Ga0182039_10493138	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300018433\|Ga0066667_10081451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2087	Open in IMG/M
3300018468\|Ga0066662_10100913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2043	Open in IMG/M
3300020581\|Ga0210399_10344272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1245	Open in IMG/M
3300020581\|Ga0210399_10478630	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300021168\|Ga0210406_10669575	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300021178\|Ga0210408_10156457	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300021405\|Ga0210387_10328015	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300021475\|Ga0210392_10580233	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300021478\|Ga0210402_11538959	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300021560\|Ga0126371_10620197	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300021560\|Ga0126371_11722718	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300021560\|Ga0126371_11722943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300021560\|Ga0126371_13702905	Not Available	515	Open in IMG/M
3300024288\|Ga0179589_10226782	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300025906\|Ga0207699_11319177	Not Available	534	Open in IMG/M
3300025906\|Ga0207699_11474231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300025910\|Ga0207684_10160764	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300025915\|Ga0207693_10313489	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300025915\|Ga0207693_10919012	Not Available	671	Open in IMG/M
3300025922\|Ga0207646_10763929	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300026304\|Ga0209240_1003091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6274	Open in IMG/M
3300026304\|Ga0209240_1020023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2557	Open in IMG/M
3300026319\|Ga0209647_1002080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16415	Open in IMG/M
3300026334\|Ga0209377_1213314	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300026361\|Ga0257176_1059402	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300026480\|Ga0257177_1063329	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300026482\|Ga0257172_1008049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1669	Open in IMG/M
3300026494\|Ga0257159_1031685	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300026508\|Ga0257161_1115306	Not Available	562	Open in IMG/M
3300027502\|Ga0209622_1004584	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300027576\|Ga0209003_1028898	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300027605\|Ga0209329_1152521	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300027874\|Ga0209465_10042138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2173	Open in IMG/M
3300027874\|Ga0209465_10311673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	788	Open in IMG/M
3300027875\|Ga0209283_10898900	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300027903\|Ga0209488_10184642	All Organisms → cellular organisms → Bacteria → Proteobacteria	1573	Open in IMG/M
3300027909\|Ga0209382_11774813	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300028047\|Ga0209526_10824278	Not Available	572	Open in IMG/M
3300028784\|Ga0307282_10373960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300028881\|Ga0307277_10002731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6820	Open in IMG/M
3300031543\|Ga0318516_10049495	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300031543\|Ga0318516_10052522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2220	Open in IMG/M
3300031543\|Ga0318516_10064438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2021	Open in IMG/M
3300031544\|Ga0318534_10832089	Not Available	518	Open in IMG/M
3300031546\|Ga0318538_10492260	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031564\|Ga0318573_10160530	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300031681\|Ga0318572_10051355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2221	Open in IMG/M
3300031719\|Ga0306917_10071829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2402	Open in IMG/M
3300031719\|Ga0306917_11473584	Not Available	524	Open in IMG/M
3300031744\|Ga0306918_10250197	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300031763\|Ga0318537_10272116	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031763\|Ga0318537_10401827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300031796\|Ga0318576_10102366	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300031797\|Ga0318550_10572542	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031833\|Ga0310917_10556824	Not Available	779	Open in IMG/M
3300031879\|Ga0306919_10196286	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium 13_2_20CM_2_61_4	1498	Open in IMG/M
3300031880\|Ga0318544_10184657	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031942\|Ga0310916_11478403	Not Available	554	Open in IMG/M
3300031947\|Ga0310909_10488283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1033	Open in IMG/M
3300032039\|Ga0318559_10316760	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300032052\|Ga0318506_10434192	Not Available	582	Open in IMG/M
3300032055\|Ga0318575_10207436	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300032063\|Ga0318504_10503195	Not Available	580	Open in IMG/M
3300032068\|Ga0318553_10417787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	702	Open in IMG/M
3300032090\|Ga0318518_10373036	Not Available	732	Open in IMG/M
3300032180\|Ga0307471_100498479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1365	Open in IMG/M
3300032261\|Ga0306920_100152780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3440	Open in IMG/M
3300032261\|Ga0306920_104057907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300033289\|Ga0310914_10351616	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300033290\|Ga0318519_10517908	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.80%
Host-Associated	Host-Associated	5.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.80%
Plants	Host-Associated → Plants	4.62%
Fungi	Host-Associated → Fungi	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.62%
Mycelium	Host-Associated → Fungi → Mycelium	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.21%
Loam	Environmental → Terrestrial → Soil → Loam	26.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.16%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.16%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.58%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03312460	2088090014	Soil	MMMRAEQLPVTPPTAFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF
KansclcFeb2_00661820	2124908045	Soil	MTMWAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
ICChiseqgaiiDRAFT_08127752	3300000033	Soil	MTMWAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
AF_2010_repII_A01DRAFT_10245382	3300000580	Forest Soil	MTMWAEQLPVTTTAFILKIGTALLITFAAMLVLVHAEIYFSHPLT
JGI12630J15595_101022471	3300001545	Forest Soil	MTTRAEQPPVTSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDI
JGI12627J18819_100261742	3300001867	Forest Soil	MTMRAEQLPATSAAFILKIGTAILIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
JGI12627J18819_101468532	3300001867	Forest Soil	MTTRAEQPPVTSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDIF*
JGIcombinedJ26739_1002664633	3300002245	Forest Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVFVHAEIYFSHPLTMRHCVSDVVF*
JGI25614J43888_100040923	3300002906	Grasslands Soil	MTMGAEQLPATTAAFILKIGTAILMMFAATLVLVHAEVYFSHPLTMHHCMSDVF*
JGI25616J43925_100458992	3300002917	Grasslands Soil	MTMGAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0062595_1000807632	3300004479	Soil	MMRAEQLPVTPPTAFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF*
Ga0062595_1007384272	3300004479	Soil	MWAEQLPATTAAFILKVGTALLIIFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0066395_100391012	3300004633	Tropical Forest Soil	MTMWAEQLPVTTTAFILKIGTALLITFAAMLVLVHAEIYFSHPLTMQHCMSELF*
Ga0066821_10058852	3300005147	Soil	MTTKAEQPPATSAAFILKIGTALLIMFAATLVLVRAEIYFSHPLTMQHCMSDVF*
Ga0066819_10285002	3300005148	Soil	MTTRAEQPPVTSAAFILKIGTALLIMFAATLVLVRAEIYFSHPLTMQHCMSDVF*
Ga0066680_100751074	3300005174	Soil	MTMWAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0066690_101125492	3300005177	Soil	MTMWAEQLPTTTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0066388_1005240122	3300005332	Tropical Forest Soil	MTMWAGQLPVTTTAFILKIGTALLIMFAATLVLVHAEVYFSHPLTMQYCMSELF*
Ga0066388_1005255052	3300005332	Tropical Forest Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVLVHAEIYFSHPLTMQHCMSDIF*
Ga0066388_1012368012	3300005332	Tropical Forest Soil	MTVSAEQLPVTTTAFVLKIGTALLITFAAMLVLVHAEIYFSHLLTMQHCMRELF*
Ga0066388_1041508332	3300005332	Tropical Forest Soil	MTIGAEQLPATSAAFILRVGTALLIMFVATLVLVHAEVYFSHPLTMHHCMSDVF*
Ga0066388_1043303422	3300005332	Tropical Forest Soil	MTTRAEQPPATSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMHHCMSDVF*
Ga0066388_1048017981	3300005332	Tropical Forest Soil	MWAGQLPVTTTAFILKIGTALLIAFAAALVLVHAENYFAHPLIMEHCMSEVF*
Ga0066388_1048579251	3300005332	Tropical Forest Soil	MTMWAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYLSHPLTMQHCMSDVF*
Ga0066388_1056955932	3300005332	Tropical Forest Soil	MTMWAEQLPVTATAFILKISTALLIAFAAMLVLVHAEIYFSHPLTMQHCMSELF*
Ga0066388_1072939322	3300005332	Tropical Forest Soil	MTMWAEQLPVTATAFILKIGTALLITFAAMLVLVHAEIYFSHPLTMQHCMSELF*
Ga0070709_100421982	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRMQAEQLPATTAPAFILKIGAALLMMLAATFMLVHAEIYFSHPLITQDLMSGLF*
Ga0070710_101170202	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRAEQLPAITAPTFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF*
Ga0070708_1000324051	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFS
Ga0070708_1001201691	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0070708_1002831671	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0070706_1001807673	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWAEQLPATTAAFILKIGTAILIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0070699_1001220112	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWAEQLPAATAAFILKIGTAILIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0070697_1012592082	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTMGAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0070696_1003220112	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRAEQLPATTAPTFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF*
Ga0066903_1012941722	3300005764	Tropical Forest Soil	MWAEQLPVTTTDFILKIATALLTTFAAMLVLVHAETYFSHPLTMQHCMSELF*
Ga0066903_1023928182	3300005764	Tropical Forest Soil	MTMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHCMSEVF*
Ga0066903_1035561782	3300005764	Tropical Forest Soil	MMISAEQLPAPTAAAFILRVGTALLMTFAATLVLVHAEIYLSHPL*
Ga0066903_1052872592	3300005764	Tropical Forest Soil	MTMWAEQLPVTATAFILKIGTALLIAFAAMLVLVHAEIYFSHPLTMQHCMSELF*
Ga0066903_1084982471	3300005764	Tropical Forest Soil	MTMWAEQLPVTATAFILKIGTALLITFAAMLVLVHAE
Ga0070717_106917562	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MQAEQLPATTAPTFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF*
Ga0070716_1018512432	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKAEQPPATSAAFILKIGTALLIMFAATLVLVHAEIYFSHPPTMQHCMSDVF*
Ga0070712_1008735032	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMRAEQLPVTPPTTFILKIGTALLMMLAATFVLVHADIYFSHPLITQDLISELF*
Ga0070712_1012432062	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAAEPLPVTTTAAFILKIATSLLMMFAATLVLVHAESHFSHPLMTRDFMSDVF*
Ga0066658_105435201	3300006794	Soil	MTMWAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLT
Ga0066659_104838451	3300006797	Soil	MTMRAEQLPDTDAATALILKVGIALLITFAATLALVHAEIYF
Ga0075421_1025292112	3300006845	Populus Rhizosphere	MMQAEQLPATTAPTFILKIGTALLMMLAATFVLVRAEIYFSHPLITQDLMSGLF*
Ga0075433_108269661	3300006852	Populus Rhizosphere	MMRAEQIPVTPPTAFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLMSGLF*
Ga0075425_1006041621	3300006854	Populus Rhizosphere	MRMQAEQLPATTAPAFILKIGAALLMMLAATFMLVRAEI
Ga0075424_1006557072	3300006904	Populus Rhizosphere	MTTRAEQPPATSAAFILKIGTAILIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0075424_1015034161	3300006904	Populus Rhizosphere	MTMWAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDIF*
Ga0075435_1017740522	3300007076	Populus Rhizosphere	MQAEQLPATTAPAFILKIGAALLMMLAATFMLVRAEIY
Ga0066710_1006246564	3300009012	Grasslands Soil	MTMRAEQLPDTDAATALILKVGIALLITFAATLALVHAEIYFSNPLITQVSFSDIF
Ga0099828_108101682	3300009089	Vadose Zone Soil	MRAEQLPATTAAFILKVGTALLIVFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0099827_109615981	3300009090	Vadose Zone Soil	MTMGAEQLPATTAAFILKVGTALLIVFAATLVLVHAEIYFSHPLTMQH
Ga0099792_107992922	3300009143	Vadose Zone Soil	MTMATEQLPATTAAAFFLKIGAALLMMFAATLVLVHAESYFSHPLMTHDLAREPF*
Ga0075423_105497591	3300009162	Populus Rhizosphere	MTTRAEQPPATSAAFILKIGTAILIMFAATLVLVHAEIYFSHP
Ga0126374_104499182	3300009792	Tropical Forest Soil	MTTKAEQPPATNAAFILKIGTALLITFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0126374_106092822	3300009792	Tropical Forest Soil	MTMWAEQLPVTTTAFILKIGTALLITFAAMLVLVHA
Ga0126374_116750462	3300009792	Tropical Forest Soil	MTMWAGQLPVTTTAFILKIGTALLIMFAATLVLVLAEVYFSHPLTMQYCMSELF*
Ga0126384_105687572	3300010046	Tropical Forest Soil	MTMWAEQLPVTTTDFILKIATALLTTFAAMLVLVHAETYFSHPLTMQHCMSELF*
Ga0126384_107571322	3300010046	Tropical Forest Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVLVHAEIYFSHPLTMQHCMS
Ga0126370_101493671	3300010358	Tropical Forest Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVLVHAEIY
Ga0126372_101541463	3300010360	Tropical Forest Soil	MTMWAEQLPVTATAFVLKIGTALLITFAAMLVLVHA
Ga0126372_109817822	3300010360	Tropical Forest Soil	MTIGAEQLPATSAAFILRVGTALLIMFVATLVLVHAEVYFSHPLTMQYCMSELF*
Ga0126378_126378892	3300010361	Tropical Forest Soil	MTMWAEQLPVTATAFVLKIGTALLITFAAMLVLVHAEVYFSHPLTMQHCMSELF*
Ga0126379_126510041	3300010366	Tropical Forest Soil	MTMWAEQLPVTTTDFILKIATALLTTFAAMLVLVHAETYFSRPL
Ga0134126_124560382	3300010396	Terrestrial Soil	MMMRAEQLPVTPPTAFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF*
Ga0124850_10031543	3300010863	Tropical Forest Soil	MTMWAEQLPVTATAFILKISTALLIAFAAMLVLVHAEITSPIR*
Ga0124850_10112081	3300010863	Tropical Forest Soil	MTTKAEQPPATNAAFILKIGTALLITFAATLVLVHAEIYLSHIR*
Ga0137389_117055681	3300012096	Vadose Zone Soil	PATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTIQHCMSDVF*
Ga0153974_11841771	3300012180	Attine Ant Fungus Gardens	MITRAEQPPVTSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDIF*
Ga0137364_109770771	3300012198	Vadose Zone Soil	MTMAAEQLPVTTTAAFILKIATALLMMFAATLVLVHAESHFSHPLMTRDFMSDVF*
Ga0137383_101236352	3300012199	Vadose Zone Soil	MTMWAEQLPAPTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0137383_110087872	3300012199	Vadose Zone Soil	MEYAAMTMWAEQLPLTTGAALIFKIRTALLISFAATLALLHAEIYFSDLLIMQDFMSIVF
Ga0137382_111941342	3300012200	Vadose Zone Soil	MTMAAEQLPVTTTAAFILKIATALLMMFAATLVLVHAESHFSHPLMTRDFMSDLF*
Ga0137363_113163532	3300012202	Vadose Zone Soil	MTMWAEQLPATTAAFILKIGTVLLIMFAATLVLVHCE
Ga0137362_107107602	3300012205	Vadose Zone Soil	TAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0137376_104416621	3300012208	Vadose Zone Soil	MWAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0137384_102348062	3300012357	Vadose Zone Soil	MTMWAEQLPPTPAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0137360_103317922	3300012361	Vadose Zone Soil	MEYAAMTMWAEQLPLTTGAALIFKFRTALLISFAATLALLHAEIYFSDLLIMQDFMSIVF
Ga0137360_111486142	3300012361	Vadose Zone Soil	MTMRAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0137358_101015211	3300012582	Vadose Zone Soil	MTMATEQLPATTAAAFLLKIGAALLMMFAATLVLGHAESHFSHPLMTRDFMSDVF*
Ga0137395_101218402	3300012917	Vadose Zone Soil	MTMWAEQLPATTAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0137396_109393221	3300012918	Vadose Zone Soil	AEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0137359_106176502	3300012923	Vadose Zone Soil	MTMWAEQLPAPTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSVF*
Ga0137359_108155032	3300012923	Vadose Zone Soil	MTMWAEQLPATTAAFILKIGTALLIMFAATLVLVHAEVYFSHALTMHHCMSDVF*
Ga0126375_103767952	3300012948	Tropical Forest Soil	MTTKAEQPPATNAAFILKIGTALLITFAATLVLVHAEIYFSHPLTMQHCMSDIF*
Ga0164300_100498542	3300012951	Soil	MMMRAEQLPATTAPTFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF*
Ga0164300_106635001	3300012951	Soil	MTTKAEQPPATSAAFILKIGTALLMMLAATFVLVHAEIYFSH
Ga0164299_101445612	3300012958	Soil	MMMRAEQLPATTAPTFILKIGTALLMMLAATFVLVHA
Ga0164299_110944062	3300012958	Soil	MTTRAEQPPVTSAAFILKIGTALLIMFAATLVLVRAEIYFSHPLAMQHCMSDVF
Ga0164301_102573741	3300012960	Soil	MMMRAEQLPVTPPTAFILKIGTALLMMLAATFVLVHAEIYF
Ga0164302_101474461	3300012961	Soil	MMMRAEQLPVTPPTAFILKIGTALLMMLAATFVLVHAEIYFSHPL
Ga0164302_114852701	3300012961	Soil	MTMWAEQLPATTAAFILKIGTALLIMFAATLVLVRAEIYFSHPLTMQHCMSDVF*
Ga0126369_100730801	3300012971	Tropical Forest Soil	KWGTMMISAEQLPAPTAAAFILRVGTALLMTFAATLVLVHAEIYLSHPL*
Ga0126369_125437401	3300012971	Tropical Forest Soil	MTIGAEQLPATSAAFILRVGTALLIMFVATLVLVHAEVYFSHPLTMQY
Ga0164309_108824372	3300012984	Soil	MTTRAEQPPVTSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF*
Ga0164304_102932472	3300012986	Soil	MMMRAEQLPVTPPTAFILKLGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF*
Ga0182033_105271851	3300016319	Soil	MTMWAEQLPVTTTAFILKIGTALLIAFAAMLVLVHAEIYFSHPLTMQHCMSE
Ga0182033_120192681	3300016319	Soil	MTMWAEQLPVTATAFILKIGTALLIAFAAMLVLVHAEIYFSHPLTMQHCMSE
Ga0182040_108979322	3300016387	Soil	MTMWAEQLPVTTTAFILKIGTALLIAFAAMLVLVHA
Ga0182039_104931382	3300016422	Soil	MTMWAEQPPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLKMQHCMSDVF
Ga0066667_100814513	3300018433	Grasslands Soil	MTMWAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF
Ga0066662_101009133	3300018468	Grasslands Soil	MTMWAEQLPATTAAFILKVGTALLIMFAVTLVLVH
Ga0210399_103442722	3300020581	Soil	MTTRAEQPPVTSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0210399_104786301	3300020581	Soil	MTMATERLPATTAAAFLLKIGAALLIMFAATVVLVQAESYFSHPLMTHDL
Ga0210406_106695752	3300021168	Soil	MTTKAEQPPATSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDIF
Ga0210408_101564572	3300021178	Soil	MTTRAEQPPVTSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDIF
Ga0210387_103280152	3300021405	Soil	MTMATERLPATTAAAFLLKIGAALLIMFAATVVLVQAESYFSHPLMTHDLAREPF
Ga0210392_105802331	3300021475	Soil	MTMATERLPATTAAAFLLKIGAALLIMFAATVVLVHAESYFSHPLMTHDLAREPF
Ga0210402_115389591	3300021478	Soil	MRAEQLPVTPPTAFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLIS
Ga0126371_106201972	3300021560	Tropical Forest Soil	MTTKAEQPPGTNAAFILKIGTALLITFAATLVLVHAEIYFSHP
Ga0126371_117227182	3300021560	Tropical Forest Soil	MTMWAGQLPVTTTAFILKIGTALLIMFAATLVLVLAEVYFSHPLTMQYCMSELF
Ga0126371_117229432	3300021560	Tropical Forest Soil	MTMWAEQLPVTATAFVLKIGTALLITFAAMLVLVHAEVYFSHPLTMQHCMSELF
Ga0126371_137029051	3300021560	Tropical Forest Soil	TNAAFILKIGTALLITFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0179589_102267822	3300024288	Vadose Zone Soil	MTMWAEQLPATTAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0207699_113191772	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWAEQLPATAAAGALILRIGTALLIAFAATIALLHAEIYF
Ga0207699_114742311	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPL
Ga0207684_101607642	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTMRAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYFSHPLTMQHCMSDVF
Ga0207693_103134891	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTMWAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMHHCMSDVF
Ga0207693_109190121	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAAEPLPVTTTAAFILKIATSLLMMFAATLVLVHAESHFSHPLMTRDFMSDVF
Ga0207646_107639291	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LPATTAAFILKIGTAILIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0209240_10030918	3300026304	Grasslands Soil	MTMRAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0209240_10200233	3300026304	Grasslands Soil	MTMRAEQLPATTAAFILKVGTALLIMFAVTLVLVHAEIYF
Ga0209647_10020803	3300026319	Grasslands Soil	MTMGAEQLPATTAAFILKIGTAILMMFAATLVLVHAEVYFSHPLTMHHCMSDVF
Ga0209377_12133142	3300026334	Soil	MTMWAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQH
Ga0257176_10594021	3300026361	Soil	MTMGAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0257177_10633291	3300026480	Soil	LFCFAGSIWYAVMTMGAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMHHCMSDVF
Ga0257172_10080491	3300026482	Soil	GSIWYAVMTMGAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDV
Ga0257159_10316852	3300026494	Soil	MTMGAEQLPATTAAFILKVGTALLIMFAATLVLVHAEIYFSHPLTMQHCMSDV
Ga0257161_11153061	3300026508	Soil	MTMRMQTAPASTELILKIGTALLITFAATLVLVHAEIYFSHSLIAMTEVF
Ga0209622_10045842	3300027502	Forest Soil	MTMRAEQLPATSAAFILKIGTAILIMFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0209003_10288981	3300027576	Forest Soil	MTMRAEQLPATSAAFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF
Ga0209329_11525212	3300027605	Forest Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVFVHAE
Ga0209465_100421382	3300027874	Tropical Forest Soil	MTMWAEQLPVTATAFILKIGTALLITFAAMLVLVHAEIYFSHPLTMQHCMSELF
Ga0209465_103116731	3300027874	Tropical Forest Soil	MTTKAEQPPATNAAFILKIGTALLITFAATLVLVHAEIYFSHPLTMQHCMSDVF
Ga0209283_108989002	3300027875	Vadose Zone Soil	MTMGAEQLPATTAAFILKVGTALLIVFAATLVLVHAEIYFSNPLTMQHCMSDVF
Ga0209488_101846422	3300027903	Vadose Zone Soil	MTMATEQLPATTAAAFLLKIGAALLMMFAATLVLVHAESYFSHPLMTHDLAREPF
Ga0209382_117748131	3300027909	Populus Rhizosphere	MMQAEQLPATTAPTFILKIGTALLMMLAATFVLVRAEIYFSHPLITQDLMSGLF
Ga0209526_108242782	3300028047	Forest Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVFVHAEIYFSHPLTMRHCVSDVVF
Ga0307282_103739602	3300028784	Soil	MMVQAEQLPVTTAPAFILKIGAALLMMLAATFVLVHAEIYFSHPLITQDLMSGLF
Ga0307277_100027315	3300028881	Soil	MMMQAEQLPATTAPTFILKIGTALLMMLAATFVLVHAEIYFSHPLITQDLISELF
Ga0318516_100494952	3300031543	Soil	MTMWAEQLPVTTTALILKIGTALLITFAAMLVLVHTDIYFSHPLTMQHCMSELF
Ga0318516_100525223	3300031543	Soil	MTMWAEQLPVTATAFILKIGTALLIAFAAMLVLVHAEIYFSHPLTMQHCMSELF
Ga0318516_100644382	3300031543	Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVLVHAEIYFSHPLTMQHCMSDIF
Ga0318534_108320892	3300031544	Soil	MTMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHCMSEVF
Ga0318538_104922602	3300031546	Soil	MTMWAEQLPVTTTAFILKIGTALLIAFAAMLVLVHAEIYFSHPLTMQHCMSELF
Ga0318573_101605302	3300031564	Soil	MTMWAEQPPATTAAFILKVGTALLIMFAATLVLVRAEVYF
Ga0318572_100513554	3300031681	Soil	MTMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAGIYFAHPLVMEHCMSEVF
Ga0306917_100718291	3300031719	Soil	MTMWAEQLPVTTTAFILKIGTALLIAFAAMLVLVHAEIYFS
Ga0306917_114735841	3300031719	Soil	MTTKAEQPPVTSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLKMQHCMSDVF
Ga0306918_102501972	3300031744	Soil	MTMWAEQLPVTATAFILKIGTALLIAFAAMLVLVHA
Ga0318537_102721161	3300031763	Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVLVHAEIYFSHP
Ga0318537_104018272	3300031763	Soil	PVTTTALILKIGTALLITFAAMLVLVHTDIYFSHPLTMQHCMSELF
Ga0318576_101023662	3300031796	Soil	MTMWAEQLPATTAAFILKVGTALLIMFAATLVLVRAEVYFSHPLTMQHCMSDVF
Ga0318550_105725421	3300031797	Soil	VMTMWAEQLPATTAAFILKVGTAILIMFAVTLVLVHAEIYFSHPLTMQHCMSDIF
Ga0310917_105568242	3300031833	Soil	AEQPPATTAAFILKVGTALLIMFAATLVLVRAEVYFSHPLTMQHCMSDVF
Ga0306919_101962861	3300031879	Soil	MTMWAEQPPATTAAFILKVGTALLIMFAATLVLVRAEVYFSHPLTMQHCMSDVF
Ga0318544_101846572	3300031880	Soil	MTMWAEQLPVTATAFILKIGTALLIAFAAMLVLVHAEIYFSHPLTMQHCMSEL
Ga0310916_114784031	3300031942	Soil	PVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHCMSEVF
Ga0310909_104882832	3300031947	Soil	MTMWAEQLPATTAAFILKVGTAILIMFAVTLVLVHAEIYFSHPLIMQHCMSDIF
Ga0318559_103167602	3300032039	Soil	MTMWAEQLPATTAAFILKVGTALLIMFAVTLVLVRAEIYYSHPL
Ga0318506_104341922	3300032052	Soil	MTMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHC
Ga0318575_102074363	3300032055	Soil	AVMTMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHCMSEVF
Ga0318504_105031951	3300032063	Soil	KAVMTMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHCMSEVF
Ga0318553_104177871	3300032068	Soil	VITMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHCMSEVF
Ga0318518_103730362	3300032090	Soil	MTMWAGQLPVTTTAFILKIGTALLIAFAAMLVLVHAENYFAHPLIMEHCMKKIAR
Ga0307471_1004984792	3300032180	Hardwood Forest Soil	MTMWAEQLPARTAAFILKIGTALLIMFAATLVLVHAEIYFSHPLTMQHCLSDVF
Ga0306920_1001527802	3300032261	Soil	MTTRAEQPPATSAAFILKIGTALLIMFAATLVLVHAEIYFSHPLKMQHCMSDVF
Ga0306920_1040579071	3300032261	Soil	MTMWAAQLPVTTTALILKIVTALLITFAAMLVLVHAEIYFSHPLTMQHCLSELF
Ga0310914_103516161	3300033289	Soil	MTMWAEQLPVTTTAFILKIGTALLIAFAAMLVLVHAEIY
Ga0318519_105179082	3300033290	Soil	MTMWAEQPPATTAAFILKVGTALLIMFAATLVLVRAEVYFSHPLTMQH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F035036

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences