Metagenome / Metatranscriptome Family F035002

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035002
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	63 residues
Representative Sequence	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPAYQVEDEEGRTHLLI
Number of Associated Samples	80
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.32 %
% of genes near scaffold ends (potentially truncated)	66.47 %
% of genes from short scaffolds (< 2000 bps)	82.66 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.006 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (22.543 % of family members)
Environment Ontology (ENVO)	Unclassified (43.931 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.179 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.03% Coil/Unstructured: 70.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF05977	MFS_3	2.31
PF00196	GerE	1.73
PF03466	LysR_substrate	1.73
PF00589	Phage_integrase	1.16
PF05974	DUF892	1.16
PF08241	Methyltransf_11	1.16
PF01380	SIS	1.16
PF13668	Ferritin_2	0.58
PF04002	RadC	0.58
PF08448	PAS_4	0.58
PF01638	HxlR	0.58
PF13673	Acetyltransf_10	0.58
PF01261	AP_endonuc_2	0.58
PF02357	NusG	0.58
PF10282	Lactonase	0.58
PF00753	Lactamase_B	0.58
PF13676	TIR_2	0.58
PF07311	Dodecin	0.58
PF16518	GrlR	0.58
PF00743	FMO-like	0.58
PF07040	DUF1326	0.58
PF02653	BPD_transp_2	0.58
PF03358	FMN_red	0.58
PF01841	Transglut_core	0.58
PF13411	MerR_1	0.58
PF14066	DUF4256	0.58
PF00072	Response_reg	0.58
PF02211	NHase_beta	0.58
PF05402	PqqD	0.58
PF13561	adh_short_C2	0.58
PF02852	Pyr_redox_dim	0.58
PF04209	HgmA_C	0.58
PF02775	TPP_enzyme_C	0.58
PF00107	ADH_zinc_N	0.58
PF00571	CBS	0.58
PF01895	PhoU	0.58
PF13580	SIS_2	0.58
PF13207	AAA_17	0.58
PF07978	NIPSNAP	0.58
PF08502	LeuA_dimer	0.58
PF11154	DUF2934	0.58
PF01471	PG_binding_1	0.58
PF00144	Beta-lactamase	0.58
PF00248	Aldo_ket_red	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	2.31
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.16
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.58
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.58
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.58
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.58
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.58
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.58
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.58
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.58
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.58
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.58
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
All Organisms	root	All Organisms	36.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
cellular organisms	root	All Organisms → cellular organisms	36.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.89 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.09 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.16 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.16 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.16 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.58 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.09 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.16 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.16 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.16 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.58 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.58 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.58 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.09 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.16 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.58 %
Planctomycetes bacterium ADurb.Bin401	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium ADurb.Bin401	0.58 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.58 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.58 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.58 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.58 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.58 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.09 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.58 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.58 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.58 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.58 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.58 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.58 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.58 %
Planctomycetes bacterium ADurb.Bin401	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium ADurb.Bin401	0.58 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.58 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.09 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.58 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.58 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.58 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	0.58 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.58 %
Anabaena	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena	0.58 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.58 %
Planctomycetes bacterium ADurb.Bin401	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium ADurb.Bin401	0.58 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.58 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.09 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.58 %
Rhodanobacter sp. C03	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C03	0.58 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.58 %
unclassified Anabaena	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena	0.58 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.58 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.58 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.58 %
Planctomycetes bacterium ADurb.Bin401	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium ADurb.Bin401	0.58 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.58 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.09 %
Anabaena sp. CRKS33	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	0.58 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.58 %
Rhodanobacter sp. C03	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C03	0.58 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.58 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.58 %
Edaphobacter bradus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	0.58 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.58 %
Planctomycetes bacterium ADurb.Bin401	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium ADurb.Bin401	0.58 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.58 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100737784	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300000955\|JGI1027J12803_107117591	Not Available	505	Open in IMG/M
3300001084\|JGI12648J13191_1032339	Not Available	519	Open in IMG/M
3300001867\|JGI12627J18819_10092937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M
3300001867\|JGI12627J18819_10272353	Not Available	681	Open in IMG/M
3300001867\|JGI12627J18819_10283801	Not Available	666	Open in IMG/M
3300001867\|JGI12627J18819_10391150	Not Available	565	Open in IMG/M
3300002245\|JGIcombinedJ26739_100319137	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300002245\|JGIcombinedJ26739_100467035	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300002245\|JGIcombinedJ26739_101431171	Not Available	585	Open in IMG/M
3300002906\|JGI25614J43888_10019656	Not Available	2162	Open in IMG/M
3300002906\|JGI25614J43888_10020369	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300002906\|JGI25614J43888_10048748	Not Available	1287	Open in IMG/M
3300002910\|JGI25615J43890_1014012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307	Open in IMG/M
3300002910\|JGI25615J43890_1036735	Not Available	805	Open in IMG/M
3300002910\|JGI25615J43890_1050954	Not Available	683	Open in IMG/M
3300002917\|JGI25616J43925_10008540	All Organisms → cellular organisms → Bacteria	4464	Open in IMG/M
3300002917\|JGI25616J43925_10072728	Not Available	1450	Open in IMG/M
3300005434\|Ga0070709_10313814	Not Available	1149	Open in IMG/M
3300005434\|Ga0070709_10808848	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium ADurb.Bin401	736	Open in IMG/M
3300005436\|Ga0070713_100222647	Not Available	1712	Open in IMG/M
3300005437\|Ga0070710_10170699	Not Available	1355	Open in IMG/M
3300005437\|Ga0070710_10582566	Not Available	777	Open in IMG/M
3300005602\|Ga0070762_10339950	Not Available	955	Open in IMG/M
3300005602\|Ga0070762_10885856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300005602\|Ga0070762_11207371	Not Available	523	Open in IMG/M
3300006028\|Ga0070717_10418299	Not Available	1205	Open in IMG/M
3300006176\|Ga0070765_100466975	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300006893\|Ga0073928_10006393	All Organisms → cellular organisms → Bacteria	15885	Open in IMG/M
3300006893\|Ga0073928_10052381	All Organisms → cellular organisms → Bacteria	3671	Open in IMG/M
3300006893\|Ga0073928_10052954	All Organisms → cellular organisms → Bacteria	3645	Open in IMG/M
3300006893\|Ga0073928_10296034	Not Available	1217	Open in IMG/M
3300006893\|Ga0073928_10623546	Not Available	759	Open in IMG/M
3300010043\|Ga0126380_11391002	Not Available	616	Open in IMG/M
3300010048\|Ga0126373_10986156	Not Available	908	Open in IMG/M
3300010048\|Ga0126373_11066075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. C03	874	Open in IMG/M
3300010366\|Ga0126379_11546876	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300010376\|Ga0126381_100100607	All Organisms → cellular organisms → Bacteria	3690	Open in IMG/M
3300010376\|Ga0126381_103930170	Not Available	579	Open in IMG/M
3300012177\|Ga0153943_1102195	Not Available	612	Open in IMG/M
3300012180\|Ga0153974_1031975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300012202\|Ga0137363_10420851	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300012203\|Ga0137399_10082076	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300012203\|Ga0137399_10625603	Not Available	905	Open in IMG/M
3300012582\|Ga0137358_10575950	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300012685\|Ga0137397_11334222	Not Available	508	Open in IMG/M
3300012918\|Ga0137396_11004034	Not Available	604	Open in IMG/M
3300016445\|Ga0182038_11053675	Not Available	721	Open in IMG/M
3300016445\|Ga0182038_11821000	Not Available	550	Open in IMG/M
3300020583\|Ga0210401_10502100	Not Available	1075	Open in IMG/M
3300020583\|Ga0210401_11234885	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300020583\|Ga0210401_11367758	Not Available	566	Open in IMG/M
3300021168\|Ga0210406_10180525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1759	Open in IMG/M
3300021168\|Ga0210406_10382764	Not Available	1130	Open in IMG/M
3300021168\|Ga0210406_10982826	Not Available	629	Open in IMG/M
3300021168\|Ga0210406_11339837	Not Available	514	Open in IMG/M
3300021170\|Ga0210400_11161271	Not Available	623	Open in IMG/M
3300021171\|Ga0210405_10448492	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300021171\|Ga0210405_10647843	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300021171\|Ga0210405_10873953	Not Available	685	Open in IMG/M
3300021178\|Ga0210408_10453767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1020	Open in IMG/M
3300021178\|Ga0210408_10749178	Not Available	767	Open in IMG/M
3300021178\|Ga0210408_11246799	Not Available	566	Open in IMG/M
3300021180\|Ga0210396_11740280	Not Available	505	Open in IMG/M
3300021361\|Ga0213872_10035189	All Organisms → cellular organisms → Bacteria	2291	Open in IMG/M
3300021361\|Ga0213872_10214975	Not Available	820	Open in IMG/M
3300021372\|Ga0213877_10155211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300021372\|Ga0213877_10180057	Not Available	679	Open in IMG/M
3300021372\|Ga0213877_10270301	Not Available	569	Open in IMG/M
3300021384\|Ga0213876_10252205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter bradus	938	Open in IMG/M
3300021402\|Ga0210385_10724442	Not Available	762	Open in IMG/M
3300021403\|Ga0210397_10272338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300021403\|Ga0210397_10336697	Not Available	1115	Open in IMG/M
3300021404\|Ga0210389_10008341	All Organisms → cellular organisms → Bacteria → Proteobacteria	8012	Open in IMG/M
3300021420\|Ga0210394_10627826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300021432\|Ga0210384_10772373	Not Available	858	Open in IMG/M
3300021432\|Ga0210384_11348185	Not Available	618	Open in IMG/M
3300021432\|Ga0210384_11694936	Not Available	537	Open in IMG/M
3300021439\|Ga0213879_10043277	Not Available	1172	Open in IMG/M
3300021439\|Ga0213879_10226632	Not Available	561	Open in IMG/M
3300021444\|Ga0213878_10002168	All Organisms → cellular organisms → Bacteria	6974	Open in IMG/M
3300021444\|Ga0213878_10014936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2805	Open in IMG/M
3300021444\|Ga0213878_10249929	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300021474\|Ga0210390_10586535	Not Available	935	Open in IMG/M
3300021475\|Ga0210392_11096288	Not Available	596	Open in IMG/M
3300021479\|Ga0210410_10144156	Not Available	2121	Open in IMG/M
3300021479\|Ga0210410_10253797	Not Available	1577	Open in IMG/M
3300021559\|Ga0210409_10416145	Not Available	1202	Open in IMG/M
3300021559\|Ga0210409_10633535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300021559\|Ga0210409_10755129	Not Available	845	Open in IMG/M
3300021560\|Ga0126371_10163021	Not Available	2301	Open in IMG/M
3300021560\|Ga0126371_11160311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	910	Open in IMG/M
3300022557\|Ga0212123_10007674	All Organisms → cellular organisms → Bacteria	16968	Open in IMG/M
3300022557\|Ga0212123_10053420	All Organisms → cellular organisms → Bacteria	3667	Open in IMG/M
3300022557\|Ga0212123_10053650	All Organisms → cellular organisms → Bacteria	3657	Open in IMG/M
3300024288\|Ga0179589_10224034	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300024347\|Ga0179591_1109580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1666	Open in IMG/M
3300025898\|Ga0207692_10468815	Not Available	795	Open in IMG/M
3300025898\|Ga0207692_11003868	Not Available	551	Open in IMG/M
3300025928\|Ga0207700_11959497	Not Available	512	Open in IMG/M
3300026304\|Ga0209240_1002321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	7246	Open in IMG/M
3300026304\|Ga0209240_1010617	Not Available	3486	Open in IMG/M
3300026304\|Ga0209240_1038124	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300026304\|Ga0209240_1120935	Not Available	894	Open in IMG/M
3300026304\|Ga0209240_1260461	Not Available	532	Open in IMG/M
3300026319\|Ga0209647_1000535	All Organisms → cellular organisms → Bacteria	35702	Open in IMG/M
3300026319\|Ga0209647_1034191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2934	Open in IMG/M
3300026319\|Ga0209647_1232945	Not Available	619	Open in IMG/M
3300026551\|Ga0209648_10174177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1673	Open in IMG/M
3300026551\|Ga0209648_10302346	Not Available	1143	Open in IMG/M
3300027061\|Ga0209729_1017470	Not Available	852	Open in IMG/M
3300027061\|Ga0209729_1050337	Not Available	531	Open in IMG/M
3300027326\|Ga0209731_1032864	Not Available	758	Open in IMG/M
3300027326\|Ga0209731_1049420	Not Available	635	Open in IMG/M
3300027376\|Ga0209004_1009794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1401	Open in IMG/M
3300027502\|Ga0209622_1002893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2598	Open in IMG/M
3300027502\|Ga0209622_1011494	Not Available	1494	Open in IMG/M
3300027648\|Ga0209420_1129451	Not Available	701	Open in IMG/M
3300027692\|Ga0209530_1105611	Not Available	800	Open in IMG/M
3300027812\|Ga0209656_10433643	Not Available	584	Open in IMG/M
3300027884\|Ga0209275_10123568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300027884\|Ga0209275_10495018	Not Available	696	Open in IMG/M
3300027889\|Ga0209380_10482101	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027889\|Ga0209380_10793819	Not Available	537	Open in IMG/M
3300027895\|Ga0209624_10272906	Not Available	1125	Open in IMG/M
3300027895\|Ga0209624_10367766	Not Available	958	Open in IMG/M
3300027895\|Ga0209624_10445880	Not Available	863	Open in IMG/M
3300027908\|Ga0209006_10521978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	988	Open in IMG/M
3300028536\|Ga0137415_10519905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	999	Open in IMG/M
3300028906\|Ga0308309_10270072	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300029636\|Ga0222749_10411648	Not Available	718	Open in IMG/M
3300031057\|Ga0170834_101571158	Not Available	549	Open in IMG/M
3300031057\|Ga0170834_110156560	Not Available	537	Open in IMG/M
3300031128\|Ga0170823_10065458	Not Available	588	Open in IMG/M
3300031715\|Ga0307476_10078179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2304	Open in IMG/M
3300031715\|Ga0307476_10119941	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300031715\|Ga0307476_10155781	Not Available	1643	Open in IMG/M
3300031715\|Ga0307476_10166093	Not Available	1592	Open in IMG/M
3300031715\|Ga0307476_10368278	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300031715\|Ga0307476_11019880	Not Available	609	Open in IMG/M
3300031718\|Ga0307474_10098104	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300031718\|Ga0307474_10166572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1668	Open in IMG/M
3300031718\|Ga0307474_10341492	Not Available	1158	Open in IMG/M
3300031718\|Ga0307474_10612699	Not Available	858	Open in IMG/M
3300031718\|Ga0307474_10741318	Not Available	776	Open in IMG/M
3300031718\|Ga0307474_10816878	Not Available	737	Open in IMG/M
3300031718\|Ga0307474_11079376	Not Available	635	Open in IMG/M
3300031720\|Ga0307469_11931883	Not Available	572	Open in IMG/M
3300031753\|Ga0307477_10023210	All Organisms → cellular organisms → Bacteria	4236	Open in IMG/M
3300031753\|Ga0307477_10089461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2137	Open in IMG/M
3300031753\|Ga0307477_10094454	Not Available	2077	Open in IMG/M
3300031753\|Ga0307477_10282482	Not Available	1147	Open in IMG/M
3300031753\|Ga0307477_10285926	Not Available	1140	Open in IMG/M
3300031753\|Ga0307477_10331507	Not Available	1048	Open in IMG/M
3300031753\|Ga0307477_10518673	Not Available	809	Open in IMG/M
3300031753\|Ga0307477_10852096	Not Available	604	Open in IMG/M
3300031753\|Ga0307477_11001256	Not Available	548	Open in IMG/M
3300031754\|Ga0307475_10075708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2583	Open in IMG/M
3300031754\|Ga0307475_10144726	Not Available	1884	Open in IMG/M
3300031754\|Ga0307475_10251945	Not Available	1415	Open in IMG/M
3300031754\|Ga0307475_10769323	Not Available	765	Open in IMG/M
3300031754\|Ga0307475_11156393	Not Available	604	Open in IMG/M
3300031823\|Ga0307478_10069645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	2657	Open in IMG/M
3300031823\|Ga0307478_10874035	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031823\|Ga0307478_11442961	Not Available	570	Open in IMG/M
3300031823\|Ga0307478_11589728	Not Available	540	Open in IMG/M
3300031962\|Ga0307479_10128447	Not Available	2478	Open in IMG/M
3300031962\|Ga0307479_10321422	Not Available	1530	Open in IMG/M
3300031962\|Ga0307479_10386852	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300031962\|Ga0307479_11271115	Not Available	698	Open in IMG/M
3300031962\|Ga0307479_11607485	Not Available	605	Open in IMG/M
3300031962\|Ga0307479_11664188	Not Available	592	Open in IMG/M
3300032180\|Ga0307471_103129293	Not Available	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.11%
Host-Associated	Host-Associated	2.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.91%
Aquatic	Environmental → Aquatic	5.20%
Plants	Host-Associated → Plants	1.73%
Fungi	Host-Associated → Fungi	1.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.91%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.16%
Mycelium	Host-Associated → Fungi → Mycelium	1.16%
Freshwater	Environmental → Aquatic → Freshwater	0.58%
Roots	Host-Associated → Plants → Roots	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.36%
Loam	Environmental → Terrestrial → Soil → Loam	22.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.16%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.20%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.16%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.58%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	22.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.20%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.20%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.62%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	4.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.16%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.16%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.58%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007377842	3300000364	Soil	IVTGVRSQNHSMHPVAFGDALPAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALALKTGVPFYQVEDEEGRTHLLIHLPIEEEK*
JGI1027J12803_1071175911	3300000955	Soil	HSMHPVAFGDALPAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALALKTGVPFYQV
JGI12648J13191_10323391	3300001084	Forest Soil	MRPVAFGEALSSGTRLTLFSDDKPDRFFTVVKFWMDGTSGVALALKTGVPTYQVEDEEGGTHLLIHLA
JGI12627J18819_100929372	3300001867	Forest Soil	MXPVAVGESLPAXTRLTLFSDDKHDXFFTVITFWMDETSGVALALKTGVPSYQVEDE*
JGI12627J18819_102723532	3300001867	Forest Soil	MRPVVFGEALPAGTRLTLLSADKPDRFFTVIKFWIDKTSGVALELNTGVPSYQVDDEEGRTHLLIHLPIEANE
JGI12627J18819_102838012	3300001867	Forest Soil	MRPVRFGEALAAGIRLTLFAADKPDRFFTVIKFWLDETSGIALALRRSVPSYEVEDEEGRIHLLLHLPIEEENEE
JGI12627J18819_103911501	3300001867	Forest Soil	MRPVGFGEAVPAGTRLTLSSADRPDRFFTVITFCIDKVSGVALDLEMGVPCYQVEDEEGRIHLLLQLP
JGIcombinedJ26739_1003191372	3300002245	Forest Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALDLQTGVPT*
JGIcombinedJ26739_1004670351	3300002245	Forest Soil	MIWMRPVDFGEALSAGTRLTLFSNDKPDRFFTVIKFWMDATSGVAVELKTGVPTYQVEDEEGRTHLLIHVPIEEESED
JGIcombinedJ26739_1014311711	3300002245	Forest Soil	MRPVAFGEVLSAGTRFTLFSDDKPDRFFTVIKFWMDATSDVALALKTSVPTYQVEEEEGRTHLLMHLPIEAEKVCRK*
JGI25614J43888_100196561	3300002906	Grasslands Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTIIKFWTDETSGVALALRGGVPTYQVEDEEGRPIY*
JGI25614J43888_100203695	3300002906	Grasslands Soil	MRPVAFGGALAAGTRLTLVSDDKQERYFTVIKFWMDETSGVALAFRTGVRFLSSRI*
JGI25614J43888_100487482	3300002906	Grasslands Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMHETSGVALALRTGVPSYQVEDEEGRTHLLIHVGSTRFENFPNSWR*
JGI25615J43890_10140122	3300002910	Grasslands Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALALK
JGI25615J43890_10367352	3300002910	Grasslands Soil	AGTRLTLFSDDKPDRFFTIIKFWTDETSGVALALRGGVPTYQVEDEEGRPIY*
JGI25615J43890_10509541	3300002910	Grasslands Soil	MRPVAFGEALAAGTRLTLFSEDKPDRFFTVIKFWMDETSGVALA*EVAFLPNQVEDEEGRAYLLIHLAIEEQNQHRRC
JGI25616J43925_100085405	3300002917	Grasslands Soil	MRPVAFGEALAAGTRLTLFSEDKPDRFFTVIKFWMDETSGVALA*
JGI25616J43925_100727281	3300002917	Grasslands Soil	MRPVEFGEALPAGTRLTLFSDDKPDRFFAVIKFWMDETSGASLALGTGVPSYQGENE
Ga0070709_103138141	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPPVEFGEALPAGTRLTLFSADKPNRHFTVITFCIDKVSGAALDLETGVPCYQVEDEE
Ga0070709_108088482	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRPFKFGEARLTLFSEGKPDRLFAVIKFWIDQTLGASLALRTSVPSYEVEDEEGRIHSLIHL
Ga0070713_1002226472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPPVEFGEALPAGTRLTLFSADKPNRHFTVITFCIDKVSGAALDLETGVPCYQVED
Ga0070710_101706991	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPPVEFGEALPAGTRLTLFSADKPNRHFTVITFCIDKVSGAALDLETGVPCYQVEDEEGRIHLL
Ga0070710_105825662	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEMGVPCYQVEDEEGRIHLL
Ga0070762_103399502	3300005602	Soil	MRPVVFGEALPKGTRLTLFSDDKPDRFFTVIKFWTDKTSGVALELKTGVPCYQVEDEERGTHLLIHLSIEEQNEHR*
Ga0070762_108858562	3300005602	Soil	MRPVAFGEALPAGTRLTLFSDEKPDRFFTVIKFWMDKTAGVALDLKTGVPTYQVEDEEGRTHLLIHVPIEE
Ga0070762_112073712	3300005602	Soil	MRPVAFGEALPAGTRLTLFSDDKPDRSFTVIKLWRMQQGIALDLQTGVPIYQVE
Ga0070717_104182991	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRPVGFGEAVPAGTRLTLSSADRPDRFFTVITFCIDKVSGVALDLEMGVPCYQVEDEEGRIHLLLQL
Ga0070765_1004669751	3300006176	Soil	MRPVEFGEALAAGARLTLFSDDKPERFFTVIKFWMDETSGVALALKTGVPTYQVEDEER
Ga0073928_1000639313	3300006893	Iron-Sulfur Acid Spring	LGILSIKPVAFGEVLSAGTRLTLFSDDKPDRFFTVIKFLMDKTSGVAR*
Ga0073928_100523814	3300006893	Iron-Sulfur Acid Spring	MRPVAFGEALSSGTRLTLFSDDKPDRFRTVINFWVDETSGVALALKTGVPTYQVEDEEGRTHLLT*
Ga0073928_100529544	3300006893	Iron-Sulfur Acid Spring	MRHVAFGESLSAGTRLTLFSDDKPDRFFTVIKFWMDKTSGVALALKTGVPSYQV*
Ga0073928_102960342	3300006893	Iron-Sulfur Acid Spring	MRPIAFGEPLAGGARLTLLSDDKPDRFFTVIKFWIDETWGVAVAIV*
Ga0073928_106235462	3300006893	Iron-Sulfur Acid Spring	MRPVEFGEALAAGARLTLFSDDKPERFFTVIKFWMDETSGVALALKTGVPTYQVEDEERRTHLLIHLPIEEEDEDR
Ga0126380_113910021	3300010043	Tropical Forest Soil	MRPVQFGETLAAGTRLTLFSHDKPDRLFTVITFLIDKVSGVALNLNTGVPCYQVEDEEGRIHLLLHLPIGEENEG
Ga0126373_109861561	3300010048	Tropical Forest Soil	MRPVQFGETLAAGTRLTLFSHDKPDRLFTVITFLIDKVSGVALNLNTGVPCYQVEDEEGRIHLLLHLPIGE
Ga0126373_110660752	3300010048	Tropical Forest Soil	MRPVGFGEALAAGTRLRLFSDDKPDRLFTAITFSIDPVSGVALDLKTGVPCYQVEDEEGRMHLLIHLPIEAD
Ga0126379_115468762	3300010366	Tropical Forest Soil	MRPVQFGEALSPGTRLTLFSNDKRDRLFTVIEFWIDPVSGVALELETGVPCYQVEDEEGRIHLLVHLPIEEYVD
Ga0126381_1001006075	3300010376	Tropical Forest Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWIDRTSGVALELNTGVPSYHVDDEEGRTHLLIHVPV
Ga0126381_1039301701	3300010376	Tropical Forest Soil	MLPMRPVVFGEALPAGTRLTLFSDDKPDRFFTVIKFWIDKTSGVALELDTGVPSYHVD
Ga0153943_11021951	3300012177	Attine Ant Fungus Gardens	MRPVAFGEALAAGTRLTLISADKPDRFFTVIKFWLDKTSGVALDLKTGVPTFQ
Ga0153974_10319752	3300012180	Attine Ant Fungus Gardens	LLFGHKILLMRPVVFGEALPAGTRLTLFSADKPDRFFTVINFWIDKTSGVALELNTGVPSYHVEDE*
Ga0137363_104208512	3300012202	Vadose Zone Soil	MRPVAFGEPLPAGTLLTLFSDDKPDRFFTVIKFSMDETSGVALTLKTAVPTYQVEDEEGR
Ga0137399_100820763	3300012203	Vadose Zone Soil	MRPVEFGEALPAGTRLTLFSDDKPDRFFAVIKFWMDETSGVALALRGGVPSYQVEDEEGRTHLLI
Ga0137399_106256033	3300012203	Vadose Zone Soil	MRPVAFGEALPARTRLTLFSDDKLDRFFTVIKFWMDGTSGVAVALRGGVPSYQVEDEEGRTHL
Ga0137358_105759502	3300012582	Vadose Zone Soil	LEPAFGHKINLMRPVEFGEDLAAGTRLTLFAEDKPDRFFTVIKFWMDETSGIALELKTGVPSYPSR
Ga0137397_113342221	3300012685	Vadose Zone Soil	MRPVEFGEALPAGTRLTLFSDDKPDRFFAVIKFWMDETLGASLALGNGVPSY
Ga0137396_110040342	3300012918	Vadose Zone Soil	MRPVEFGEALPAGTRLTLFSEDKPDRFFAVIKFWMDETLGASLALGTGVPSYQGENEEGRTHLLIHPAIEEQNERRWYL
Ga0182038_110536751	3300016445	Soil	MRPVEFGEALAAGTRLTLFPDNKPERFFTVIKFWMDETSGASQTVTT
Ga0182038_118210001	3300016445	Soil	MRPVAFGEPSPAGTRLTLFSDDKPDRFFTVIKFWVDETSGVALAVKGGVPTCQVEDGLPR
Ga0210401_105021001	3300020583	Soil	MRSVGFGQAVPSGTRLALFSADRPDRFFTVIAFCIDKVPGVGLDLETGVPCYQVEDEEGRIHLLLQLPIGEENENR
Ga0210401_112348852	3300020583	Soil	MRPVAFGEALPTGTRLTLFSDDKPDRFFTVIKFWMDETSGVALELKTG
Ga0210401_113677581	3300020583	Soil	MHPVAFGEALPVGTSLTLFSDDKPDRFFTVIKFWMDATSGVALNLKTGVPTYQVEDEEGRIHLLIHLPI
Ga0210406_101805251	3300021168	Soil	MRPVAFGEALSAGTRLTLFSDDKPDRFFTVIEFWMDATSGVALERKTGVPTYQVEDHEGRTHLLIHLAIEEQH
Ga0210406_103827641	3300021168	Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFSMHETSGVALALRTGVPSYQVEDEEGRTHLLIHVGSARFENFPNSWR
Ga0210406_109828262	3300021168	Soil	MRPVAFGEALPGGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELRTGVPSYQVEDEEGRPHLLIHVGWTRFENFPSSWR
Ga0210406_113398372	3300021168	Soil	MRPVAFGEALTPGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPTYQVEDEEGRTHLL
Ga0210400_111612711	3300021170	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALD
Ga0210405_104484923	3300021171	Soil	MPPVAFGEALLAGIRLTLFSDDKPDRFFTIIKFWMDETSGGALSLRGGVPTYQVEDDSGHYLQFP
Ga0210405_106478431	3300021171	Soil	MHLVEFGEALATGTRLTLFSDDKPDRFSTLIKFWMDETSGFALALKTGVPTYQVE
Ga0210405_108739531	3300021171	Soil	MHPIAFGEALPVGTRLTLFSDDKPDRFFTVIEFWMDATSGVALELKTGVPTNQVEDEEGR
Ga0210408_104537671	3300021178	Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDKTSGVALDLETGVPTYQV
Ga0210408_107491781	3300021178	Soil	MRPVEFGEALAAGTRLTLFSDDKPDRFFTVIKFWMDQTSGVALALRTGIPSYQVEDEEGRTHLLIH
Ga0210408_112467992	3300021178	Soil	LGILGVRPVGFGEPLPAGTRVTLFSDDKPDRFFTIIKFWMDKTSGVALDLKTGVPS
Ga0210396_117402801	3300021180	Soil	EALPAGTWLTLFSNDKPDRFVTVIEFWTDQTLAASLVLRSDVPSYQVEDEEGRTHLLIHLPI
Ga0213872_100351894	3300021361	Rhizosphere	MRLVEFGEALSAGTRLTLFSNDKPDRFSTVIKFWMAETSGVALALKGGVPTY
Ga0213872_102149751	3300021361	Rhizosphere	VSGPNITLMRPVAFGEALPAGTRLTLFSNDKPDRFFTVVKFWIDKTSGVALDLKT
Ga0213877_101552112	3300021372	Bulk Soil	MRPVAFREPLPADRRLTLFSNDKPDRFFTVIKFWMDETSGVAL
Ga0213877_101800571	3300021372	Bulk Soil	MRPVVFGEALPVGTRLTLFSADKPDRYFTVIKFWIDKTSGVALELNTGVP
Ga0213877_102703011	3300021372	Bulk Soil	MRPVVFGEALPAGTRLTLFSADKPDRFFTVIKFWIDKTSGVALDLNTGVP
Ga0213876_102522052	3300021384	Plant Roots	MRPVVFGEALPAGTRLTLLSMDKPERFFTVVKFWIDKTSGVALDLNTGVPSYHVDDEEGSVFTDPSAHRG
Ga0210385_107244422	3300021402	Soil	MPPVEFGEALPAGTRLTLFSADKPNRHFTVITFCIDKVSGAALDLETGVPCY
Ga0210397_102723383	3300021403	Soil	MRAVEFGEAVPRQRDWPDKSDRLFTVITFLMNKVSGVALDLEMGVPCYQVEDEEGRIHLLIQLPIGEENENRWCLWRPDQ
Ga0210397_103366971	3300021403	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEENKN
Ga0210389_100083413	3300021404	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIG
Ga0210394_106278261	3300021420	Soil	MRAVEFGEAVPRQRDWPDKSDRLFTVITFLMNKVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEANENRW
Ga0210384_107723732	3300021432	Soil	MRPVAFGEALPAGTRLTLFSDDKPDRIFTVITFLIDNVSGVALDLKTRFPCYQVKDE
Ga0210384_113481851	3300021432	Soil	MRPVAFGEALSAGTRLTLFSDDKPDRFFTVIKFWMDEISGVALTPET
Ga0210384_116949362	3300021432	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEGVPCY
Ga0213879_100432772	3300021439	Bulk Soil	MRPVVFGEALPVGTRLTLFSADKPDRYFTVIKFWIDKTSGVALELN
Ga0213879_102266322	3300021439	Bulk Soil	MRLVEFGEALSAGTRLTLFSNDKPDRFFTVIKFWMTETSGVALALKGGVPTY
Ga0213878_1000216812	3300021444	Bulk Soil	MRPVTFREALSADTRLILLSADKPDRFFTVIKFWIDKTSGVALELNTGVPSYH
Ga0213878_100149361	3300021444	Bulk Soil	MRPVVFGEALPAGTHLTLFSADKPDRFFTVIKFWIDKTSGVALELNTGVPSYHVTD
Ga0213878_102499293	3300021444	Bulk Soil	MRPVEFGEALAGGTRLTLYSDYKPERVFTVIKFWIDETSGIALKLKTGVPSYE
Ga0210390_105865353	3300021474	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEMGVPCYQVED
Ga0210392_110962882	3300021475	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDL
Ga0210410_101441561	3300021479	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEE
Ga0210410_102537973	3300021479	Soil	MRPVGFGEAVPAGTRLTLSSADRPDRFFTVITFCIDKVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEA
Ga0210409_104161451	3300021559	Soil	MRPVEFGEALAAGTRLTLFSNDKPDRFFTVIKFWMDKTSGVALALKTGVPSYQVEDEEGRTHLLINFPIDEEHE
Ga0210409_106335351	3300021559	Soil	MRAVEFGEAVPRQRDWPDKSDRLFTVITFLMNKVSGVALDLEMGVPCYQVEDEEGRIHLLIQLPIGEENENRWCLWPARSG
Ga0210409_107551291	3300021559	Soil	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEMGVP
Ga0126371_101630212	3300021560	Tropical Forest Soil	MRPVEFGEPVPAETRLTLFSADKPERFFRVIKFWLDQTSGIAHALRTGVPSYQVEDVEGRIHLLLDLPIEEENEDGWHLR
Ga0126371_111603112	3300021560	Tropical Forest Soil	MRPVEFCEAVPSGTRLTLFSADKPDRHFTVITFCIDWVSGVALDLETGVPCYEVEDEEGRIHLLLQL
Ga0212123_1000767413	3300022557	Iron-Sulfur Acid Spring	LGILSIKPVAFGEVLSAGTRLTLFSDDKPDRFFTVIKFLMDKTSGVAR
Ga0212123_100534203	3300022557	Iron-Sulfur Acid Spring	MRPVAFGEALSSGTRLTLFSDDKPDRFRTVINFWVDETSGVALALKTGVPTYQVEDEEGRTHLLT
Ga0212123_100536502	3300022557	Iron-Sulfur Acid Spring	MRHVAFGESLSAGTRLTLFSDDKPDRFFTVIKFWMDKTSGVALALKTGVPSYQV
Ga0179589_102240341	3300024288	Vadose Zone Soil	MRPVPFGEPLPGGTRLALVSDDKPDRFFTVIKFWMDETSGVAFALKTG
Ga0179591_11095802	3300024347	Vadose Zone Soil	MRPVEFGEALAAGTRLTLFAEDKPDRFFTVIKFWMDETSGIALELK
Ga0207692_104688152	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRPVEFGEAVPAGTRLTLFSADRPDRFFTVITFCIDRVSGVALDLEMGVPCYQVEDEEGRIHLLIQLPIGEENENRWC
Ga0207692_110038681	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPPVEFGEALPAGTRLTLFSADKPNRHFTVITFCIDKVSGAALDLETGVPCYQVEDEEGRIHLLLQLPIG
Ga0207700_119594972	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRPVAFGEALSAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALALRGSVPSYQVEDEE
Ga0209240_10023211	3300026304	Grasslands Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALALKAGVPSYQ
Ga0209240_10106172	3300026304	Grasslands Soil	MRPVAFGEALAAGTRLTLFSEDKPDRFFTVIKFWMDETSGVALA
Ga0209240_10381241	3300026304	Grasslands Soil	MRPVAFGEALSAGARLTLFSDDKPDRFFTVIKFWMDKTSGVALDLKTGVPTYQVEDEEG
Ga0209240_11209352	3300026304	Grasslands Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPAYQVEDEEGRTHLLI
Ga0209240_12604612	3300026304	Grasslands Soil	MRPVAFGEPLPGGTRLTLFSDDKPYRFFTILKFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLPIEAEEHR
Ga0209647_100053525	3300026319	Grasslands Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTIIKFWTDETSGVALALRGGVPTYQVEDEEGRPIY
Ga0209647_10341913	3300026319	Grasslands Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMHETSGVALALRTGVPSYQVEDEEGRTHLLIHVGSTRFENFPNSWR
Ga0209647_12329451	3300026319	Grasslands Soil	MRPVAFGEALSAGARLTLFSDDKPDRFFTVIKFWMDERSGVALVLKTGVPTYQVEDEEGRTYLLLHVRIEEQHEH
Ga0209648_101741773	3300026551	Grasslands Soil	MRPVAFGEPLPAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPTYQVEDEEGRTHLLIHLPIEEGGEAR
Ga0209648_103023462	3300026551	Grasslands Soil	MRPVAFGEALPAGTRLTLVSDDKPDRFFTVIKFWLDETSGVALALKTGVPSYQVEDEEGRTHLLIHLSN
Ga0209729_10174703	3300027061	Forest Soil	MRPVEFGEAVPTGTRLTLFSVDRPDRFFTVITFCIDQVSGVALDLEMGVPCYQVEDEEGRIHLLIQLPIGEKNENR
Ga0209729_10503372	3300027061	Forest Soil	MRPVAFGEALSSGIRLTLFSDDKPDRFFTVIKFWMDETSGVALTLKTGVP
Ga0209731_10328642	3300027326	Forest Soil	MRLVKFSEALAPGTPLTLFSDDKPERLFTVIKFWVDEGLSNPLKLSSGVPCYQVEDEE
Ga0209731_10494201	3300027326	Forest Soil	MRPVRFGEALAAGIRLTLFAADKPDRFFTVIKFWLDETSGIALALRRGVPSYEVEDEEGRIHLLLHLPIEEE
Ga0209004_10097942	3300027376	Forest Soil	MRPVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWLDETSGVALALKTGVPSYQVEDE
Ga0209622_10028932	3300027502	Forest Soil	MRPVAVGESLPASTRLTLFSDDKHDRFFTVITFWMDETSGVALALKTGVPSYQVEDE
Ga0209622_10114942	3300027502	Forest Soil	MRPVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPTYQVEDEEGRTHLLIHLAIEEQIEHRWCL
Ga0209420_11294512	3300027648	Forest Soil	QPASGHKTTLRRPVAFGEALSAGIRLTLFSDDKTHRFFTVIKFWVDETSGVALAL
Ga0209530_11056111	3300027692	Forest Soil	MRPVAFGEALSSGTRLTLFSDDKPDRFFTVVKFWMDGTSGVALAL
Ga0209656_104336431	3300027812	Bog Forest Soil	MRPVAFGEALPGGTRLTLFSDNKSGRLFTVIKLWTDETSGVALELKTGVPSYQVEDDEGRTHLLIHLPIEE
Ga0209275_101235681	3300027884	Soil	MRPVAFGEALPAGTRLTLFSDEKPDRFFTVIKFWMDKTAGVALDLKTGVPTYQVEDEEGRTHLLIHVP
Ga0209275_104950181	3300027884	Soil	MRPVVFGEALPKGTRLTLFSDDKPDRFFTVIKFWTDKTSGVALELKTGVPCYQVEDEERGTHLLIHLSIEEQNEHR
Ga0209380_104821012	3300027889	Soil	MTQMRPVAFGETLSAGTRLTLFSDDKPDRFFTVIKFWMDKTSGVALDLKTG
Ga0209380_107938191	3300027889	Soil	MTLMRPVAFGEALSAGARLTLFSDDKPDRFFTVIKFWMDETSGVALALRGGVPSYQFEDEEGRTHLLIHLPIEEEEEDR
Ga0209624_102729061	3300027895	Forest Soil	PVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALDLQTGVPT
Ga0209624_103677662	3300027895	Forest Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALDLQTG
Ga0209624_104458802	3300027895	Forest Soil	MRPVAFGEVLSAGTRFTLFSDDKPDRFFTVIKFWMDATSDVALALKTSVPTYQVEEEEGRTHLLMHLPIEAEKVCRK
Ga0209006_105219781	3300027908	Forest Soil	MIWMRPVDFGEALSAGTRLTLFSNDKPDRFFTVIKFWMDATSGVAVELKTGVPTYQVEDEEGRTHLLIHVPIEEES
Ga0137415_105199051	3300028536	Vadose Zone Soil	MRPIAFGEPLSGATRLTLVSDGKPDCFFTVIKFWMDKTSGVALALKTGVPTYQVEDEEGRTHLLIHLPVEEENSPRLYSHTNNRWLSLSR
Ga0308309_102700722	3300028906	Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWLDATSGVALDLKTGVPTYQVED
Ga0222749_104116481	3300029636	Soil	VPPVEFGEAVPAGTQLTLFSADKPDRLFTVIAFLMDKVSGVALDLETGVPCYQVEDEEGRIHLLLQLPIGE
Ga0170834_1015711581	3300031057	Forest Soil	MRPVAFGEALSAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALALRGGVPTYQVEDEEGRIHLLIHLPIEEERCRPVVSLAARSRRI
Ga0170834_1101565601	3300031057	Forest Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFSVIKFWMDVTSGVALALKGGVPSYQVEDEEGRTHLLIHLPIEEEDEDRWCL
Ga0170823_100654582	3300031128	Forest Soil	MRPVVFGEALSAGTRLTLFSDDKPDRFFTVIKFRMDATSGVALALKTGVPTYQVEDEEGRTYLLLHVRIEE
Ga0307476_100781793	3300031715	Hardwood Forest Soil	MQPVGFGEPLLSGTRLTLISADKPDRFFAVIKFWLDETSGV
Ga0307476_101199412	3300031715	Hardwood Forest Soil	MSLRSEIIRMRPVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWIDAVSGVALDLQTGVPCYEEI
Ga0307476_101557811	3300031715	Hardwood Forest Soil	MRPVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPTYKVEDEEGRIHLL
Ga0307476_101660931	3300031715	Hardwood Forest Soil	MHPLAFGEALSAGGRLTLSDDKPNRFFTVIKCWMDGTSGVALELKTGVPTYQVEDEEGRTHLLIHLTIEEDR
Ga0307476_103682782	3300031715	Hardwood Forest Soil	MRPVAFGEALPAGTRLTLFSNDKPHRSFTVIKSWMDATSGVALELKTGVPT
Ga0307476_110198802	3300031715	Hardwood Forest Soil	MRPVAFGEALSSGTRLTLFSHDKPDTFFTVIKFWMDATSGVALELKTGVPSYQVEDEEGRTHLLIQLPIEEG
Ga0307474_100981041	3300031718	Hardwood Forest Soil	LIATAIGSQNHSDATVEFGEALAPGSRLTLFSDDKPDRFFRVIKSWIDQTLGESLALRTGVPSYEVEDEKGRIHLLIYFPID
Ga0307474_101665723	3300031718	Hardwood Forest Soil	LRRKTALTRPVAFGEALTAGTRLTLFSDDKPDRFFTVIRFWMDETSGVALALKTSVPS
Ga0307474_103414922	3300031718	Hardwood Forest Soil	MQPVGFGEPLLSGTRLTLISADKPDRFFAVIKFWLDETSGVALAVKGGVPTYQV
Ga0307474_106126991	3300031718	Hardwood Forest Soil	MRPVAFGEALAAGPRLTLFSGDKPDRFFTVIKFWMDETSGVALALETGVPSYQIEDEEGRTHLLIHLGIKEED
Ga0307474_107413181	3300031718	Hardwood Forest Soil	PVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWIDAVSGVALDLQTGVPCYEEI
Ga0307474_108168781	3300031718	Hardwood Forest Soil	MRPVAFGEALLARTRLTLFSDDKPDRFFTVIKFWIDATSGVALDLKTGVPTYQVEDEEGRTH
Ga0307474_110793761	3300031718	Hardwood Forest Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLPIEEDPA
Ga0307469_119318831	3300031720	Hardwood Forest Soil	MRPLAFGEALPAGTRLTLCSDDKHDRFFSVIKFWTDETSGVALELKTGVPT
Ga0307477_100232107	3300031753	Hardwood Forest Soil	MRPVAFGEPLPAGTRLTLFSDDKPDRFFTVIKFWMDETSGVALDLKTGVPTYQVEDEEAGHIY
Ga0307477_100894613	3300031753	Hardwood Forest Soil	MRPVAVGESLPAGTRLTLFSDDKHDRFFTVITFWMDETSGVALALKTGVPSYQVEDE
Ga0307477_100944541	3300031753	Hardwood Forest Soil	LMRPVAFGEALPVGTRLTRLSEDKPARFFRVIKFWMDETSGIALALKTGVPSYQVEDEEGRTHLLIHLPIEEEDVESMVSRAAGSRRL
Ga0307477_102824821	3300031753	Hardwood Forest Soil	MRPVAFGEPLPAGTRLTLFSDDKPDRSFTIIKFWMDETSSVALAQI
Ga0307477_102859261	3300031753	Hardwood Forest Soil	MRPVVFGEALPAGTRLTLLSADKPDRFFTVIKFWTDETSGVALELKTGVPTYQVEDEEGRTHLRDSRADPGRG
Ga0307477_103315072	3300031753	Hardwood Forest Soil	MRPVEFGEALAPGSRLTLFSNDKPDRFFTVIKFWMDKTSGVALALKTGVPTYQVEDEEGRTH
Ga0307477_105186731	3300031753	Hardwood Forest Soil	MRPVTFGEVLPAGTRLTLVSDDKPDCFFTVIKFWVDETPGVALALKGGVPSYQVEDEEGRTHLLIHLAWK
Ga0307477_108520961	3300031753	Hardwood Forest Soil	MRPVEFGEALAAGTRLTLFSDDKPDRFFTVIKFWMDQTSGVALALRTGIPSYQVEDEEGRTHLL
Ga0307477_110012561	3300031753	Hardwood Forest Soil	MRPVEFGEALATGTRLTLFSDDKPERLFTVIKFWVDEGLSIPLKLSSGVPCYQVEDEEG
Ga0307475_100757083	3300031754	Hardwood Forest Soil	MRPVEFGEPLAAGTRLTLFSADKPDRLFTVITFWIDKVSGVALDLETGVPCYQVEDEEGRIHLLIHFPIEEENEHRWCLW
Ga0307475_101447261	3300031754	Hardwood Forest Soil	MRPVAFGEALPAGTRLTLFSDDKPDPFFTVIKFWMDETMGASPGHETGVPSYQVEDEEGR
Ga0307475_102519452	3300031754	Hardwood Forest Soil	MRPVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPTYQVEDEGRQNSLTASPSD
Ga0307475_107693231	3300031754	Hardwood Forest Soil	MQPVGFGEPLLSGTRLALISADKPDRFFTVIKFWLDETSGVALA
Ga0307475_111563932	3300031754	Hardwood Forest Soil	MRPVAFGEALPAGTRLTLFSDDRPDRFFTVIKFWMDEASGVALALKTGVPTYQVEDEEGR
Ga0307478_100696452	3300031823	Hardwood Forest Soil	MHPLAFGEALSAGGRLTLFSDDKPNRFFTVIKCWMDGTSGVALELKTGVPTYQVEDEEGRTHLLIHLTIEEDR
Ga0307478_108740352	3300031823	Hardwood Forest Soil	MSLRSEIIRMRPVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWIDAVSGVALDLETGVPCYSSR
Ga0307478_114429612	3300031823	Hardwood Forest Soil	MQPVGFGEPLLSGTRLTLISADKPDRFFAVIKFWLDETSGVALAVKGGVPTYQVEDEEGR
Ga0307478_115897282	3300031823	Hardwood Forest Soil	MRPVAFGEALPAGSRLTLFSDDKPDRFFTVIKSWMDATSGVALELKIGVPTYQVEDEEGRTHLLIHLSMFAPR
Ga0307479_101284472	3300031962	Hardwood Forest Soil	MRPVAFGEALPAGTRLTLFSDDKPDRFFTVISFWLDETSGVALELKTGVPSYQVEDEEGRTHLLIHVPIEEEN
Ga0307479_103214221	3300031962	Hardwood Forest Soil	MCPVAFGEALPAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVPTYQVEDEEG
Ga0307479_103868524	3300031962	Hardwood Forest Soil	MRPVAFGEALPAGIRLTLFSDDKPDRFLTVIKFWIDETSGVALALKTGV
Ga0307479_112711151	3300031962	Hardwood Forest Soil	MRPVAFGEALPVGTRLTLFSDDKPDRFFTVIKFWMDETSGVVLTLKGGVPTYQVEDEEGRTYLLIHLA
Ga0307479_116074852	3300031962	Hardwood Forest Soil	MRPVAFGEALSAGTRLTLFSDDKPDRFFTVIKSWMDATSGVALELKTSVPTYHVEDGLP
Ga0307479_116641881	3300031962	Hardwood Forest Soil	MRPVAFGEALPAGTRLTLISDDKPDRFFTVIKFWMDETAGVALALKTGVPTYQVEDEEGRTHLLIRLPIEEENE
Ga0307471_1031292932	3300032180	Hardwood Forest Soil	MRPVAFGEALTAGTRLTLFSDDKPDRFFTVIKFWMDATSGVALELKTGVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035002

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences