Metagenome / Metatranscriptome Family F034984

Basic Information
Family ID	F034984
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	47 residues
Representative Sequence	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA
Number of Associated Samples	134
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	1.16 %
% of genes near scaffold ends (potentially truncated)	42.77 %
% of genes from short scaffolds (< 2000 bps)	64.74 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Archaea (76.879 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.717 % of family members)
Environment Ontology (ENVO)	Unclassified (34.104 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.584 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.79% β-sheet: 0.00% Coil/Unstructured: 59.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF00072	Response_reg	12.14
PF00106	adh_short	4.05
PF00155	Aminotran_1_2	3.47
PF00582	Usp	2.31
PF01361	Tautomerase	2.31
PF01118	Semialdhyde_dh	1.73
PF01656	CbiA	1.73
PF03186	CobD_Cbib	1.73
PF00226	DnaJ	1.73
PF13473	Cupredoxin_1	1.16
PF02774	Semialdhyde_dhC	1.16
PF14470	bPH_3	1.16
PF13847	Methyltransf_31	1.16
PF06662	C5-epim_C	0.58
PF01545	Cation_efflux	0.58
PF03725	RNase_PH_C	0.58
PF08240	ADH_N	0.58
PF07883	Cupin_2	0.58
PF06197	DUF998	0.58
PF02133	Transp_cyt_pur	0.58
PF01904	DUF72	0.58
PF01789	PsbP	0.58
PF07332	Phage_holin_3_6	0.58
PF08327	AHSA1	0.58
PF00266	Aminotran_5	0.58
PF01920	Prefoldin_2	0.58
PF09754	PAC2	0.58
PF14947	HTH_45	0.58
PF01243	Putative_PNPOx	0.58
PF13459	Fer4_15	0.58
PF00353	HemolysinCabind	0.58
PF01780	Ribosomal_L37ae	0.58
PF13412	HTH_24	0.58
PF04055	Radical_SAM	0.58
PF01063	Aminotran_4	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.31
COG1270	Cobalamin biosynthesis protein CobD/CbiB	Coenzyme transport and metabolism [H]	1.73
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	1.16
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.16
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	1.16
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.58
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.58
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	0.58
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.58
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.58
COG1997	Ribosomal protein L37AE/L43A	Translation, ribosomal structure and biogenesis [J]	0.58
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.58
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.58
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.58

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.46 %
Unclassified	root	N/A	22.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.46 %
Unclassified	root	N/A	22.54 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	76.88 %
Unclassified	root	N/A	22.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.54 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	15.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.54 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	15.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.54 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	10.40 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	2.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.54 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	10.40 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	1.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.54 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	10.40 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.54 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	8.67 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.54 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	6.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.73 %
Candidatus Nitrososphaera gargensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis	0.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908021\|BSRL3_Contig_8519	All Organisms → cellular organisms → Archaea	637	Open in IMG/M
2140918013\|NODE_215139_length_1325_cov_5.547925	All Organisms → cellular organisms → Archaea	1357	Open in IMG/M
2162886006\|SwRhRL3b_contig_4030015	All Organisms → cellular organisms → Archaea	1403	Open in IMG/M
2162886007\|SwRhRL2b_contig_1230565	All Organisms → cellular organisms → Archaea	1057	Open in IMG/M
3300000041\|ARcpr5oldR_c000861	All Organisms → cellular organisms → Archaea	3406	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11017632	All Organisms → cellular organisms → Archaea	1357	Open in IMG/M
3300000559\|F14TC_100962336	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1583	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1002639	All Organisms → cellular organisms → Archaea	2117	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1008280	All Organisms → cellular organisms → Archaea	1160	Open in IMG/M
3300000652\|ARCol0yngRDRAFT_1002263	All Organisms → cellular organisms → Archaea	1472	Open in IMG/M
3300000890\|JGI11643J12802_11928434	All Organisms → cellular organisms → Archaea	1136	Open in IMG/M
3300001990\|JGI24737J22298_10104636	Not Available	838	Open in IMG/M
3300002090\|JGI24806J26614_1003998	All Organisms → cellular organisms → Archaea	4261	Open in IMG/M
3300002090\|JGI24806J26614_1011468	Not Available	1278	Open in IMG/M
3300002896\|JGI24802J43972_1019760	All Organisms → cellular organisms → Archaea	543	Open in IMG/M
3300002899\|JGIcombinedJ43975_10000274	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera gargensis	6269	Open in IMG/M
3300002899\|JGIcombinedJ43975_10006638	All Organisms → cellular organisms → Archaea	1883	Open in IMG/M
3300004463\|Ga0063356_100599990	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1488	Open in IMG/M
3300004479\|Ga0062595_100624448	All Organisms → cellular organisms → Archaea	846	Open in IMG/M
3300005105\|Ga0066812_1001914	All Organisms → cellular organisms → Archaea	1047	Open in IMG/M
3300005161\|Ga0066807_1020317	All Organisms → cellular organisms → Archaea	675	Open in IMG/M
3300005168\|Ga0066809_10000488	All Organisms → cellular organisms → Archaea	5240	Open in IMG/M
3300005169\|Ga0066810_10008393	All Organisms → cellular organisms → Archaea	1459	Open in IMG/M
3300005186\|Ga0066676_10081234	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1925	Open in IMG/M
3300005186\|Ga0066676_10649865	All Organisms → cellular organisms → Archaea	716	Open in IMG/M
3300005269\|Ga0065706_1000165	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	9763	Open in IMG/M
3300005269\|Ga0065706_1001242	All Organisms → cellular organisms → Archaea	825	Open in IMG/M
3300005269\|Ga0065706_1001812	All Organisms → cellular organisms → Archaea	2078	Open in IMG/M
3300005276\|Ga0065717_1002959	All Organisms → cellular organisms → Archaea	1499	Open in IMG/M
3300005276\|Ga0065717_1003461	All Organisms → cellular organisms → Archaea	1258	Open in IMG/M
3300005277\|Ga0065716_1006309	Not Available	817	Open in IMG/M
3300005289\|Ga0065704_10016538	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3448	Open in IMG/M
3300005289\|Ga0065704_10088317	All Organisms → cellular organisms → Archaea	2949	Open in IMG/M
3300005293\|Ga0065715_10089024	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	16483	Open in IMG/M
3300005294\|Ga0065705_10000011	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	13580	Open in IMG/M
3300005294\|Ga0065705_10006481	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	5243	Open in IMG/M
3300005294\|Ga0065705_10237033	Not Available	1248	Open in IMG/M
3300005294\|Ga0065705_10676154	All Organisms → cellular organisms → Archaea	664	Open in IMG/M
3300005295\|Ga0065707_10000034	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	7617	Open in IMG/M
3300005328\|Ga0070676_10005179	All Organisms → cellular organisms → Archaea	6927	Open in IMG/M
3300005338\|Ga0068868_100138996	Not Available	1992	Open in IMG/M
3300005343\|Ga0070687_100017939	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3265	Open in IMG/M
3300005364\|Ga0070673_100803671	Not Available	868	Open in IMG/M
3300005455\|Ga0070663_101676736	Not Available	568	Open in IMG/M
3300005459\|Ga0068867_100109951	All Organisms → cellular organisms → Archaea	2116	Open in IMG/M
3300005539\|Ga0068853_100180992	All Organisms → cellular organisms → Archaea	1911	Open in IMG/M
3300005543\|Ga0070672_100013067	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	5852	Open in IMG/M
3300005543\|Ga0070672_100271041	All Organisms → cellular organisms → Archaea	1433	Open in IMG/M
3300005545\|Ga0070695_100156681	All Organisms → cellular organisms → Archaea	1594	Open in IMG/M
3300005615\|Ga0070702_100177417	All Organisms → cellular organisms → Archaea	1391	Open in IMG/M
3300005615\|Ga0070702_100461633	Not Available	924	Open in IMG/M
3300005937\|Ga0081455_10001363	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	30136	Open in IMG/M
3300005937\|Ga0081455_10004263	All Organisms → cellular organisms → Archaea	16115	Open in IMG/M
3300005937\|Ga0081455_10456189	All Organisms → cellular organisms → Archaea	872	Open in IMG/M
3300005937\|Ga0081455_10798420	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006049\|Ga0075417_10001062	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	7187	Open in IMG/M
3300006049\|Ga0075417_10094372	All Organisms → cellular organisms → Archaea	1350	Open in IMG/M
3300006058\|Ga0075432_10007117	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3811	Open in IMG/M
3300006196\|Ga0075422_10177567	Not Available	864	Open in IMG/M
3300006844\|Ga0075428_100123654	All Organisms → cellular organisms → Archaea	2816	Open in IMG/M
3300006845\|Ga0075421_100485436	Not Available	1470	Open in IMG/M
3300006846\|Ga0075430_101009455	Not Available	685	Open in IMG/M
3300006852\|Ga0075433_10399561	Not Available	1213	Open in IMG/M
3300006854\|Ga0075425_102367345	All Organisms → cellular organisms → Archaea	590	Open in IMG/M
3300006881\|Ga0068865_100064747	All Organisms → cellular organisms → Archaea	2573	Open in IMG/M
3300006904\|Ga0075424_100049864	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4374	Open in IMG/M
3300006904\|Ga0075424_101885934	Not Available	631	Open in IMG/M
3300006904\|Ga0075424_102679973	Not Available	520	Open in IMG/M
3300006969\|Ga0075419_10089588	All Organisms → cellular organisms → Archaea	1967	Open in IMG/M
3300009036\|Ga0105244_10190806	Not Available	969	Open in IMG/M
3300009094\|Ga0111539_10257038	All Organisms → cellular organisms → Archaea	2034	Open in IMG/M
3300009147\|Ga0114129_11019818	All Organisms → cellular organisms → Archaea	1041	Open in IMG/M
3300009156\|Ga0111538_11088530	All Organisms → cellular organisms → Archaea	1011	Open in IMG/M
3300009162\|Ga0075423_12346135	Not Available	581	Open in IMG/M
3300009176\|Ga0105242_10073956	All Organisms → cellular organisms → Archaea	2834	Open in IMG/M
3300009545\|Ga0105237_10129431	All Organisms → cellular organisms → Archaea	2519	Open in IMG/M
3300009553\|Ga0105249_10367961	All Organisms → cellular organisms → Archaea	1460	Open in IMG/M
3300009553\|Ga0105249_10461620	Not Available	1310	Open in IMG/M
3300009553\|Ga0105249_10477246	All Organisms → cellular organisms → Archaea	1289	Open in IMG/M
3300010043\|Ga0126380_11793241	Not Available	555	Open in IMG/M
3300010362\|Ga0126377_10387214	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1405	Open in IMG/M
3300010375\|Ga0105239_10326796	All Organisms → cellular organisms → Archaea	1730	Open in IMG/M
3300012355\|Ga0137369_10013872	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	7824	Open in IMG/M
3300012473\|Ga0157340_1004268	All Organisms → cellular organisms → Archaea	819	Open in IMG/M
3300012474\|Ga0157356_1000050	All Organisms → cellular organisms → Archaea	4315	Open in IMG/M
3300012477\|Ga0157336_1006315	All Organisms → cellular organisms → Archaea	809	Open in IMG/M
3300012480\|Ga0157346_1012805	All Organisms → cellular organisms → Archaea	640	Open in IMG/M
3300012480\|Ga0157346_1015005	Not Available	616	Open in IMG/M
3300012483\|Ga0157337_1002738	All Organisms → cellular organisms → Archaea	1020	Open in IMG/M
3300012487\|Ga0157321_1000144	All Organisms → cellular organisms → Archaea	3065	Open in IMG/M
3300012492\|Ga0157335_1000520	All Organisms → cellular organisms → Archaea	1785	Open in IMG/M
3300012493\|Ga0157355_1000509	All Organisms → cellular organisms → Archaea	1780	Open in IMG/M
3300012493\|Ga0157355_1030871	Not Available	553	Open in IMG/M
3300012499\|Ga0157350_1000481	All Organisms → cellular organisms → Archaea	1955	Open in IMG/M
3300012501\|Ga0157351_1000083	All Organisms → cellular organisms → Archaea	4320	Open in IMG/M
3300012503\|Ga0157313_1049702	Not Available	542	Open in IMG/M
3300012510\|Ga0157316_1057995	Not Available	553	Open in IMG/M
3300012512\|Ga0157327_1003336	All Organisms → cellular organisms → Archaea	1177	Open in IMG/M
3300012948\|Ga0126375_10002762	All Organisms → cellular organisms → Archaea	6164	Open in IMG/M
3300012948\|Ga0126375_10026859	All Organisms → cellular organisms → Archaea	2789	Open in IMG/M
3300012948\|Ga0126375_10544562	Not Available	875	Open in IMG/M
3300012951\|Ga0164300_10042579	All Organisms → cellular organisms → Archaea	1749	Open in IMG/M
3300012951\|Ga0164300_10095637	All Organisms → cellular organisms → Archaea	1292	Open in IMG/M
3300012960\|Ga0164301_10647645	Not Available	787	Open in IMG/M
3300012984\|Ga0164309_10033733	All Organisms → cellular organisms → Archaea	2836	Open in IMG/M
3300012984\|Ga0164309_10046227	All Organisms → cellular organisms → Archaea	2494	Open in IMG/M
3300012985\|Ga0164308_10291830	All Organisms → cellular organisms → Archaea	1291	Open in IMG/M
3300013102\|Ga0157371_10018852	All Organisms → cellular organisms → Archaea	5097	Open in IMG/M
3300013307\|Ga0157372_10261107	All Organisms → cellular organisms → Archaea	2011	Open in IMG/M
3300013307\|Ga0157372_10769902	All Organisms → cellular organisms → Archaea	1119	Open in IMG/M
3300015371\|Ga0132258_11047512	Not Available	2062	Open in IMG/M
3300015371\|Ga0132258_11348688	All Organisms → cellular organisms → Archaea	1802	Open in IMG/M
3300015371\|Ga0132258_12403118	Not Available	1320	Open in IMG/M
3300015372\|Ga0132256_100180470	Not Available	2145	Open in IMG/M
3300015372\|Ga0132256_103085751	Not Available	560	Open in IMG/M
3300015372\|Ga0132256_103702914	Not Available	514	Open in IMG/M
3300015373\|Ga0132257_100537427	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1438	Open in IMG/M
3300015373\|Ga0132257_103644687	Not Available	560	Open in IMG/M
3300015374\|Ga0132255_100309832	Not Available	2275	Open in IMG/M
3300017656\|Ga0134112_10101374	All Organisms → cellular organisms → Archaea	1082	Open in IMG/M
3300017792\|Ga0163161_10469153	Not Available	1020	Open in IMG/M
3300018000\|Ga0184604_10002301	All Organisms → cellular organisms → Archaea	3005	Open in IMG/M
3300018027\|Ga0184605_10016342	All Organisms → cellular organisms → Archaea	2918	Open in IMG/M
3300018052\|Ga0184638_1158405	Not Available	814	Open in IMG/M
3300018056\|Ga0184623_10238615	All Organisms → cellular organisms → Archaea	831	Open in IMG/M
3300018072\|Ga0184635_10272518	All Organisms → cellular organisms → Archaea	668	Open in IMG/M
3300018074\|Ga0184640_10020067	All Organisms → cellular organisms → Archaea	2541	Open in IMG/M
3300018082\|Ga0184639_10067096	All Organisms → cellular organisms → Archaea	1871	Open in IMG/M
3300018465\|Ga0190269_10592533	All Organisms → cellular organisms → Archaea	747	Open in IMG/M
3300019233\|Ga0184645_1124514	All Organisms → cellular organisms → Archaea	1158	Open in IMG/M
3300019279\|Ga0184642_1572992	All Organisms → cellular organisms → Archaea	1156	Open in IMG/M
3300019869\|Ga0193705_1082253	Not Available	618	Open in IMG/M
3300021080\|Ga0210382_10040240	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	1800	Open in IMG/M
3300021344\|Ga0193719_10000354	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	16782	Open in IMG/M
3300025315\|Ga0207697_10006041	Not Available	5537	Open in IMG/M
3300025315\|Ga0207697_10018422	All Organisms → cellular organisms → Archaea	2864	Open in IMG/M
3300025901\|Ga0207688_10000719	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	16407	Open in IMG/M
3300025907\|Ga0207645_10000427	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	34904	Open in IMG/M
3300025914\|Ga0207671_10703078	All Organisms → cellular organisms → Archaea	804	Open in IMG/M
3300025926\|Ga0207659_10001090	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	16109	Open in IMG/M
3300025933\|Ga0207706_10001459	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	23645	Open in IMG/M
3300025938\|Ga0207704_10052756	All Organisms → cellular organisms → Archaea	2467	Open in IMG/M
3300025940\|Ga0207691_10002045	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	19731	Open in IMG/M
3300025940\|Ga0207691_10085603	All Organisms → cellular organisms → Archaea	2829	Open in IMG/M
3300025960\|Ga0207651_10044340	All Organisms → cellular organisms → Archaea	2976	Open in IMG/M
3300025961\|Ga0207712_10742798	Not Available	859	Open in IMG/M
3300026067\|Ga0207678_11513297	Not Available	592	Open in IMG/M
3300026324\|Ga0209470_1023795	All Organisms → cellular organisms → Archaea	3255	Open in IMG/M
3300026750\|Ga0207483_101887	All Organisms → cellular organisms → Archaea	831	Open in IMG/M
3300027560\|Ga0207981_1002305	All Organisms → cellular organisms → Archaea	3410	Open in IMG/M
3300027873\|Ga0209814_10000969	All Organisms → cellular organisms → Archaea	9946	Open in IMG/M
3300027873\|Ga0209814_10082489	All Organisms → cellular organisms → Archaea	1356	Open in IMG/M
3300027873\|Ga0209814_10084890	All Organisms → cellular organisms → Archaea	1337	Open in IMG/M
3300027880\|Ga0209481_10018790	All Organisms → cellular organisms → Archaea	3040	Open in IMG/M
3300027907\|Ga0207428_10006076	All Organisms → cellular organisms → Archaea	11169	Open in IMG/M
3300027948\|Ga0209858_1006814	Not Available	850	Open in IMG/M
3300028796\|Ga0307287_10178584	All Organisms → cellular organisms → Archaea	807	Open in IMG/M
3300028814\|Ga0307302_10125328	All Organisms → cellular organisms → Archaea	1236	Open in IMG/M
3300028819\|Ga0307296_10034734	All Organisms → cellular organisms → Archaea	2660	Open in IMG/M
3300030829\|Ga0308203_1007316	All Organisms → cellular organisms → Archaea	1195	Open in IMG/M
3300030903\|Ga0308206_1007643	All Organisms → cellular organisms → Archaea	1521	Open in IMG/M
3300030993\|Ga0308190_1018180	All Organisms → cellular organisms → Archaea	1124	Open in IMG/M
3300031091\|Ga0308201_10016416	All Organisms → cellular organisms → Archaea	1477	Open in IMG/M
3300031716\|Ga0310813_10639271	All Organisms → cellular organisms → Archaea	945	Open in IMG/M
3300031720\|Ga0307469_10230920	All Organisms → cellular organisms → Archaea	1472	Open in IMG/M
3300031908\|Ga0310900_11424810	Not Available	582	Open in IMG/M
3300032174\|Ga0307470_10246360	All Organisms → cellular organisms → Archaea	1177	Open in IMG/M
3300032180\|Ga0307471_100919631	All Organisms → cellular organisms → Archaea	1042	Open in IMG/M
3300033412\|Ga0310810_10056951	All Organisms → cellular organisms → Archaea	4747	Open in IMG/M
3300033412\|Ga0310810_10247232	All Organisms → cellular organisms → Archaea	1965	Open in IMG/M
3300033412\|Ga0310810_11349910	All Organisms → cellular organisms → Archaea	553	Open in IMG/M
3300034681\|Ga0370546_031112	All Organisms → cellular organisms → Archaea	759	Open in IMG/M
3300034818\|Ga0373950_0071061	All Organisms → cellular organisms → Archaea	713	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.02%
Environmental	Environmental	47.98%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.02%
Terrestrial	Environmental → Terrestrial	42.20%
Aquatic	Environmental → Aquatic	5.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.12%
Sediment	Environmental → Aquatic → Sediment	4.05%
Freshwater	Environmental → Aquatic → Freshwater	1.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.05%
Loam	Environmental → Terrestrial → Soil → Loam	4.05%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.73%
Sand	Environmental → Terrestrial → Soil → Sand	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.58%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	5.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	2.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.58%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.58%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.58%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.58%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908021	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000652	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA	Host-Associated	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005269	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026750	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-B (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027948	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BSRL3_00196070	2124908021	Switchgrass Rhizosphere	MDALISYAIVIGAFIAFAAILFGSRAKRVAKKKESPVGTPEEIKHSPA
Iowa-Corn-GraphCirc_00095570	2140918013	Soil	MDAPISYAIVAGVFIALAVICFVARAKRRAPKKETPKRSAEQIKHSPA
SwRhRL3b_0381.00001110	2162886006	Switchgrass Rhizosphere	MDALISYAIVIGAFIVFAAILFGSRAKRVAKKKESPVGTPEEIKHSPA
SwRhRL2b_0001.00006470	2162886007	Switchgrass Rhizosphere	MDAPISYAIVIGFFVGLVVILFSARAKRVADKKKETPKGSAEEIKHSPA
ARcpr5oldR_0008612	3300000041	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPVGSSEEIKHSPA*
ICChiseqgaiiFebDRAFT_110176322	3300000363	Soil	MDAPISYAIVAGVFIALAVICFVARAKRRAPKKETPKRSAEQIKHSPA*
F14TC_1009623363	3300000559	Soil	MDAPISYAIVIGFFIGLVVILFSARAKRVAGSKKETPVGSAEEIKHSPA*
KanNP_Total_noBrdU_T14TCDRAFT_10026391	3300000596	Soil	IGLVVILFSARAKRVAGSKKETPVGSAEEIKHSPA*
KanNP_Total_noBrdU_T14TCDRAFT_10082802	3300000596	Soil	MDAPISYAIVFGVFIALVAILFGSRAKRVAKKESPVGTPEEIKHSPA*
ARCol0yngRDRAFT_10022632	3300000652	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLAPKKETPKRSAEEIKHSPT*
JGI11643J12802_119284342	3300000890	Soil	MDAPISYAIVIGFFIGFAAILFGSRAKRLAKKKESPVGTPEQIKHSPA*
JGI24737J22298_101046361	3300001990	Corn Rhizosphere	IVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT*
JGI24806J26614_10039986	3300002090	Soil	MDAPISYAIVAGVFIALAVICFVARAKRRAPKKETPKRSAEEIKHSPA*
JGI24806J26614_10114682	3300002090	Soil	MDAPISYAIVIGFFIGLVVILFSARAKRVAGTKKETPKGSTEEIKHSPA*
JGI24802J43972_10197602	3300002896	Soil	FVYYIIKSMDALISYAIVFGVFIAFVAILFGSRAKRLAKKESPVGTPEEIKHSPA*
JGIcombinedJ43975_1000027410	3300002899	Soil	SFVYYIIKSMDALISYAIVFGVFIAFVAILFGSRAKRLAKKESPVGTPEEIKHSPA*
JGIcombinedJ43975_100066381	3300002899	Soil	DAPISYAIVAGVFIALAVICFVARAKRRAPKKETPKRSAEEIKHSPA*
Ga0063356_1005999905	3300004463	Arabidopsis Thaliana Rhizosphere	MDAPISYAIVLGVFIALVAILFASRAKRKRVAKKETPAQSPEEIKHSPA*
Ga0062595_1006244482	3300004479	Soil	MADALISYTIVIGVFIGFVAILFGSRAKRVAKKKESPVGTPEEIKHSTA*
Ga0066812_10019142	3300005105	Soil	MADALISYAIVIGVFIGFVAILFGSRAKRVAKKKESPVGTPEEIKHSTA*
Ga0066807_10203172	3300005161	Soil	FVYYTIKSMADALISYAIVIGVFIGFVAILFGSRAKRVAKKKESPVGTPEEIKHSTA*
Ga0066809_100004888	3300005168	Soil	MDAPISYAIVIGFFIGLVVIFFSARAKRVADKKKETPKGSAEEIKHSPA*
Ga0066810_100083931	3300005169	Soil	ISYAIVIGFFIGLVVILFSARAKRVADKKKETPKGSAEEIKHSPA*
Ga0066676_100812342	3300005186	Soil	MADALISYAIVIGVFIAFVAILFGSRAKRLAKKESPVGTPEKIKHSPA*
Ga0066676_106498652	3300005186	Soil	MADALISYAIVIGAFIAFAAILFGSRAKRLAKKESPVGTPEEIKHSPA*
Ga0065706_10001659	3300005269	Switchgrass Rhizosphere	MADALISYAIVIGAFIAFAAILFGSRAKRVAKKKESPVGTPEEIKHSPA*
Ga0065706_10012421	3300005269	Switchgrass Rhizosphere	SFVYYIIKSMADALISYAIVIGVFIGLVAILFGSRAKRVAKKKESPLGTPEEIKHSTA*
Ga0065706_10018123	3300005269	Switchgrass Rhizosphere	MDAPISYAIVIGFFVGLVVILFSARAKRVADKKKETPKGSAEEIKHSPA*
Ga0065717_10029593	3300005276	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSPA*
Ga0065717_10034612	3300005276	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT*
Ga0065716_10063092	3300005277	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0065704_100165382	3300005289	Switchgrass Rhizosphere	MDALISYAIVIGAFIAFAAILFGSRAKRVAKKKESPVGTPEEIKHSPX*
Ga0065704_100883172	3300005289	Switchgrass Rhizosphere	VYYIIKSMADALISYAIVIGVFIGLVAILFGSRAKRVAKKKESPLGTPEEIKHSTA*
Ga0065715_100890242	3300005293	Miscanthus Rhizosphere	MDAPISYAIVASVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0065705_100000119	3300005294	Switchgrass Rhizosphere	MDALISYAIVIGAFIAFAAILFGSRAKRVAKKKESPVGTPEEIKHSPA*
Ga0065705_100064811	3300005294	Switchgrass Rhizosphere	MADALISYAIVIGVFIGLVAILFGSRAKRVAKKKESPLGTPEEIKHSTA*
Ga0065705_102370331	3300005294	Switchgrass Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVAGKKKETPVGSAEEIKHSPA*
Ga0065705_106761541	3300005294	Switchgrass Rhizosphere	MDALISYAIVFGVFIAFVAILFGSRAKRLSKKKESPVGTPEEIKHSPA*
Ga0065707_1000003410	3300005295	Switchgrass Rhizosphere	VYYIIKSMDALISYAIVIGAFIXFAAILFGSRAKRVAKKKESPVGTPEEIKHSPA*
Ga0070676_100051797	3300005328	Miscanthus Rhizosphere	MDVPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0068868_1001389964	3300005338	Miscanthus Rhizosphere	VAGVFIAFAVICFAARAKRVAPKKEKPIGSPEEMKRSPA*
Ga0070687_1000179397	3300005343	Switchgrass Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEELKHSPT*
Ga0070673_1008036711	3300005364	Switchgrass Rhizosphere	SYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT*
Ga0070663_1016767361	3300005455	Corn Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAE
Ga0068867_1001099514	3300005459	Miscanthus Rhizosphere	VAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0068853_1001809924	3300005539	Corn Rhizosphere	VASVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0070672_1000130671	3300005543	Miscanthus Rhizosphere	MDAPISYAIVASVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSPA*
Ga0070672_1002710413	3300005543	Miscanthus Rhizosphere	LAGVFIALAVICFGARAKRVAPKKKPIGIAEGKRSPA*
Ga0070695_1001566811	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKH
Ga0070702_1001774172	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARVKRVAPKKEKPIGSAEEMKHSPA*
Ga0070702_1004616333	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT*
Ga0081455_100013634	3300005937	Tabebuia Heterophylla Rhizosphere	MDALISYAIVVGFFTGFVAILFGSRAKRVARKESPVGTPEEIKHPPA*
Ga0081455_1000426311	3300005937	Tabebuia Heterophylla Rhizosphere	MDALISYAIVAGFLIGFAVICFAARGKRLAPKKETPKGSAEEIKHSPA*
Ga0081455_104561892	3300005937	Tabebuia Heterophylla Rhizosphere	MDSPLSYAIVAGFFIGFAVILFSARAKRVAGKKKETPKGSAEEIKHSPA*
Ga0081455_107984201	3300005937	Tabebuia Heterophylla Rhizosphere	YMDAPISYAIVTGIFIALLVICLAARAKRVASKKEPPKSSAEEIKHSPA*
Ga0075417_100010625	3300006049	Populus Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVAGKKKETPTGSAEEIKHSTA*
Ga0075417_100943721	3300006049	Populus Rhizosphere	YMDAPISYAIVIGFFIGLVVILFSARAKRVGGKKKETPTGSAEEIKHSPA*
Ga0075432_100071171	3300006058	Populus Rhizosphere	SYAIVIGFFIGLVVILFSARAKRVGGKKKETPTGSAEEIKHSPA*
Ga0075422_101775671	3300006196	Populus Rhizosphere	APISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT*
Ga0075428_1001236543	3300006844	Populus Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVGGKKKETPTGSAEEIKHSPA*
Ga0075421_1004854363	3300006845	Populus Rhizosphere	YMDAPISYAIVIGFFIGLVVILFSARAKRVAGKKKETPTGSAEEIKHSTA*
Ga0075430_1010094552	3300006846	Populus Rhizosphere	ISYAIVIGFFIGLVVILFSARAKRVAGKKKETPTGSAEEIKHSTA*
Ga0075433_103995611	3300006852	Populus Rhizosphere	MDSPLSYAIVAGFFIGFAVILFSARAKRITGKKKETRVGSAEEIKHSPA*
Ga0075425_1023673451	3300006854	Populus Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVADKKKETPKGSAEEIKHSPS*
Ga0068865_1000647471	3300006881	Miscanthus Rhizosphere	YAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0075424_1000498641	3300006904	Populus Rhizosphere	PISYAIVIGFFIGLVVILFSARAKRVAGKKKETPTGSAEEIKHSTA*
Ga0075424_1018859341	3300006904	Populus Rhizosphere	MDTPISYAIVIGFFIGLVVILFSARAKRVAGKKKETPTGSAE
Ga0075424_1026799732	3300006904	Populus Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVAGKKKETPTGSAE
Ga0075419_100895885	3300006969	Populus Rhizosphere	APISYAIVIGFFIGLVVILFSARAKRVGGKKKETPTGSAEEIKHSPA*
Ga0105244_101908062	3300009036	Miscanthus Rhizosphere	MDVPISYAIVAGVFIALAVICFVARAKRLAPKKEMPKRSAEEIKHSPA*
Ga0111539_102570383	3300009094	Populus Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLVPKKQTPKRSAEEIKHSPT*
Ga0114129_110198182	3300009147	Populus Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVGGKKKETLKGSAEEIKHSPA*
Ga0111538_110885303	3300009156	Populus Rhizosphere	PISYAIVIGFFIGLVVILFSARAKRVADKKKETPKGSAEEIKHSPS*
Ga0075423_123461352	3300009162	Populus Rhizosphere	AIAIGFFIGLVVILFSARAKRVAGKKKETPTGNAEEIKHSTA*
Ga0105242_100739565	3300009176	Miscanthus Rhizosphere	PISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT*
Ga0105237_101294315	3300009545	Corn Rhizosphere	YYMDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSPA*
Ga0105249_103679613	3300009553	Switchgrass Rhizosphere	VASVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKH
Ga0105249_104616202	3300009553	Switchgrass Rhizosphere	YMDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSPEEMKRSPA*
Ga0105249_104772461	3300009553	Switchgrass Rhizosphere	SVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0126380_117932411	3300010043	Tropical Forest Soil	MADAPISYAIVAGVLIAFAVICFAGRAKRVAPKKEKPVGSAEEIKHS
Ga0126377_103872141	3300010362	Tropical Forest Soil	YAIVAGVLIAFAVICFAARAKRVAPKKEKPVGSAEEIKHSPA*
Ga0105239_103267961	3300010375	Corn Rhizosphere	AGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0137369_100138727	3300012355	Vadose Zone Soil	MDALISYAIVFGVFIAFVAILFGSRAKRLAKKESPVGTPEKIKHSPA*
Ga0157340_10042681	3300012473	Arabidopsis Rhizosphere	MDAPISYAIVACVFIALAVICIVARAKRLAPKKETPKRSAEEIKHSPA*
Ga0157356_10000504	3300012474	Unplanted Soil	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEMNRSPA*
Ga0157336_10063153	3300012477	Arabidopsis Rhizosphere	MDAPISYAIVAFVFIALAVICFVARAKRLAPKKETPKRSAEEIKHSPT*
Ga0157346_10128052	3300012480	Arabidopsis Rhizosphere	YYMDAPISYAVLSGIFIAFAVICFAARAKRVAPKKEKPMESAEEMKRSPA*
Ga0157346_10150051	3300012480	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSPEEMKRSPT*
Ga0157337_10027382	3300012483	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPVGSSEELKHSPA*
Ga0157321_10001446	3300012487	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLAPKKETPKRSAEEIKHSPA*
Ga0157335_10005203	3300012492	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPA*
Ga0157355_10005091	3300012493	Unplanted Soil	MDAPISYAIVAGVFIALAVICFVARAKRVAPKKETPKRSAEEIKHSPA*
Ga0157355_10308711	3300012493	Unplanted Soil	YYMDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0157350_10004811	3300012499	Unplanted Soil	ISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0157351_10000831	3300012501	Unplanted Soil	DAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0157313_10497021	3300012503	Arabidopsis Rhizosphere	AGVFFALAVICFVARAKRLAPKKETPKRTAEEIKHSPA*
Ga0157316_10579951	3300012510	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPMGSAEEMKHSPA*
Ga0157327_10033361	3300012512	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIALAVICFVARTKRLAPKKETPKRSAEEIKHSPT*
Ga0126375_100027624	3300012948	Tropical Forest Soil	MDAPISYAIVAGVLIAFAVICFAARAKRLAPEKKTPKSSAEEIKHSPA*
Ga0126375_100268591	3300012948	Tropical Forest Soil	MDAPISYAIVAGVLIAFAVICFAGRAKRVAPKKEKPVGSAEEIKHSPA*
Ga0126375_105445622	3300012948	Tropical Forest Soil	MDAPISYAIVAGVLIAFAVICFAARAKRIAPKKEKPVGSAEEIKHSPA*
Ga0164300_100425791	3300012951	Soil	GVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSPA*
Ga0164300_100956374	3300012951	Soil	MDAPISYAIVAGVFIALAVICFVARAKRLALKKETPKRSAEEIKHSPT*
Ga0164301_106476451	3300012960	Soil	MDAPISYAIVASVFIAFAVICFAARAKRVAPKKEKPIESAEEMNRSPA*
Ga0164309_100337332	3300012984	Soil	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKTIENAEEMKRSPA*
Ga0164309_100462275	3300012984	Soil	APISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA*
Ga0164308_102918301	3300012985	Soil	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEKMNRSPA*
Ga0157371_100188521	3300013102	Corn Rhizosphere	ISYAIVAGVFIALAVICFVARAKRLVPKQETPKRSAEEIKHSPT*
Ga0157372_102611071	3300013307	Corn Rhizosphere	MDAPISYAIVAGVFIALAVICFVARSKRLVPKKETPKRSAEEIKHSPT*
Ga0157372_107699022	3300013307	Corn Rhizosphere	YYYMDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSPA*
Ga0132258_110475121	3300015371	Arabidopsis Rhizosphere	ISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKRSPA*
Ga0132258_113486883	3300015371	Arabidopsis Rhizosphere	VIGFFIGLVVILFSARAKRVAGKKKETPTGSAEEIKHSTA*
Ga0132258_124031181	3300015371	Arabidopsis Rhizosphere	SYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSPEEMKRSPT*
Ga0132256_1001804702	3300015372	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLPPKKETPKRSAEEIKHSPA*
Ga0132256_1030857512	3300015372	Arabidopsis Rhizosphere	VAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKRSPA*
Ga0132256_1037029141	3300015372	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLALKKETPKRSAEEIKNSPT*
Ga0132257_1005374273	3300015373	Arabidopsis Rhizosphere	GVFIAFAVICFAARAKRVAPKKEKPVGSSEEIKHSPA*
Ga0132257_1036446871	3300015373	Arabidopsis Rhizosphere	PISYAIVAGVFIALAVICFVARAKRLAPKKETPKRSAEEIKHSPA*
Ga0132255_1003098321	3300015374	Arabidopsis Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEM
Ga0134112_101013742	3300017656	Grasslands Soil	MDALISYAIVFGVFIAFAAILFGSRAKRVAKKESPVGTPEEIKHSPA
Ga0163161_104691532	3300017792	Switchgrass Rhizosphere	IVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT
Ga0184604_100023013	3300018000	Groundwater Sediment	MDALISYAIVIGFFIAFVAILFGSRAKRLANKKESPVGTPEKIKHSPA
Ga0184605_100163423	3300018027	Groundwater Sediment	MADALISYAIVIGAFIAFAAILFGSRAKRLAKKKESPVGTPEEIKHSPA
Ga0184638_11584051	3300018052	Groundwater Sediment	MADALISYAIVTGVFIALVVILFASRAKRLAGKKETPVGTAEEIKHSPA
Ga0184623_102386152	3300018056	Groundwater Sediment	MADALISYAIVIGAFIAFAAILFGSRAKRVAKKESPVGTPEEIK
Ga0184635_102725182	3300018072	Groundwater Sediment	MADALISYAIVIGAFIAFAAILFGSRAKRLAKKESPVGTPEEIKHSPA
Ga0184640_100200673	3300018074	Groundwater Sediment	MADALVSYAIVIGAFIAFAAILFGSRAKRVAKKESPVGTPEEIKHSPA
Ga0184639_100670961	3300018082	Groundwater Sediment	DALISYAIVIGAFIAFAAILFGSRAKRVAKKESPVGTPEEIKHSPA
Ga0190269_105925332	3300018465	Soil	MDALISYAIVFGFFIAFAAILFGSRAKRVAKNKESPVGTPEKIKHSPA
Ga0184645_11245141	3300019233	Groundwater Sediment	IKSMADALISYAIVIGAFIAFAAILFGSRAKRLAKKESPVGTPEEIKHSPA
Ga0184642_15729922	3300019279	Groundwater Sediment	ALISYAIVIGFFIAFVAILFGSRAKRLANKKESPVGTPEKIKHSPA
Ga0193705_10822531	3300019869	Soil	MADALISYAIVIGAFIAFAAILFGSRAKRVAKKESPVGTPEEIKHSPA
Ga0210382_100402401	3300021080	Groundwater Sediment	MDALISYAIVIGFFIAFVAILFGSRAKRLANKKESPVGTP
Ga0193719_1000035411	3300021344	Soil	VYYIIKSIADALISYAIVIGAFIAFAAILFGSRAKRLAKKESPVGTPEEIKHSPA
Ga0207697_100060418	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIKHSPT
Ga0207697_100184222	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA
Ga0207688_100007199	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDAPISYAIVAGVFIALAVICFVARAKRLAPKKETPKRSAEEIKHSPT
Ga0207645_100004275	3300025907	Miscanthus Rhizosphere	VAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA
Ga0207671_107030783	3300025914	Corn Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMK
Ga0207659_1000109020	3300025926	Miscanthus Rhizosphere	MDAPISYAIVASVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA
Ga0207706_100014598	3300025933	Corn Rhizosphere	VASVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA
Ga0207704_100527561	3300025938	Miscanthus Rhizosphere	APISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSAEEMKHSPA
Ga0207691_100020459	3300025940	Miscanthus Rhizosphere	MDAPISYAIVASVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSPA
Ga0207691_100856034	3300025940	Miscanthus Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPVGSSEEIKHSPA
Ga0207651_100443401	3300025960	Switchgrass Rhizosphere	LVGVFIALAVICFGARAKRVAPKKEKPVGSSEEIKHSPA
Ga0207712_107427981	3300025961	Switchgrass Rhizosphere	MDVPITYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSPEEMKRSPA
Ga0207678_115132971	3300026067	Corn Rhizosphere	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSP
Ga0209470_10237952	3300026324	Soil	MADALISYAIVIGVFIAFVAILFGSRAKRLAKKESPVGTPEKIKHSPA
Ga0207483_1018871	3300026750	Soil	MDAPISYAIVIGFFIGFAAILFGSRAKRVAKKKESPVGTPEEIKHSPA
Ga0207981_10023056	3300027560	Soil	MDAPISYAIVIGFFIGLVVIFFSARAKRVADKKKETPKGSAEEIKHSPA
Ga0209814_100009699	3300027873	Populus Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVAGKKKETPTGSAEEIKHSTA
Ga0209814_100824892	3300027873	Populus Rhizosphere	MDALISYAIVFGVFIAFVAILFGSRAKRLSKKKESPVGTPEEIKHSPA
Ga0209814_100848901	3300027873	Populus Rhizosphere	SYAIVIGFFIGLVVILFSARAKRVGGKKKETPTGSAEEIKHSPA
Ga0209481_100187901	3300027880	Populus Rhizosphere	ISYAIVIGFFIGLVVILFSARAKRVGGKKKETPTGSAEEIKHSPA
Ga0207428_100060763	3300027907	Populus Rhizosphere	MDAPISYAIVIGFFIGLVVILFSARAKRVGGKKKETPTGSAEEIKHSPA
Ga0209858_10068142	3300027948	Groundwater Sand	MADALISYAIVTGVFIALVVILFASRAKRLRAGKKETPVGTSEEIKHSPA
Ga0307287_101785841	3300028796	Soil	VIGAFIAFAAILFGSRAKRVAKKESPVGTPEEIKHSPA
Ga0307302_101253281	3300028814	Soil	MADALISYAIVIGAFIAFAAILFGSRAKRVAKKESPVGTPEEIKHSH
Ga0307296_100347341	3300028819	Soil	MADALISYAIVIGAFIAFAAILFGSRAKRLAKKKESPVGT
Ga0308203_10073161	3300030829	Soil	DALISYAIVIGAFIAFAAILFGSRAKRLAKKKESPVGTPEEIKHSPA
Ga0308206_10076431	3300030903	Soil	LISYAIVIGFFIAFVAILFGSRAKRLANKKESPVGTPEKIKHSPA
Ga0308190_10181801	3300030993	Soil	ALISYAIVIGAFIAFAAILFGSRAKRLAKKESPVGTPEEIKHSPA
Ga0308201_100164162	3300031091	Soil	ISYAIVIGAFIAFAAILFGSRAKRLAKKKESPVGTPEEIKHSPA
Ga0310813_106392712	3300031716	Soil	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSPEEMKRS
Ga0307469_102309202	3300031720	Hardwood Forest Soil	MADALISYAIVIGVFIGLVAILFGSRAKRVAKKKESPLGTPEEIKHSTA
Ga0310900_114248102	3300031908	Soil	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEMNRSPA
Ga0307470_102463603	3300032174	Hardwood Forest Soil	LISYAIVIGVFIGLVAILFGSRAKRVAKKKESPLGTPEEIKHSTA
Ga0307471_1009196311	3300032180	Hardwood Forest Soil	VGLVVILFSARAKRVADKKKETPKGSAEEIKHSPA
Ga0310810_100569514	3300033412	Soil	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIESAEEMKRSPA
Ga0310810_102472321	3300033412	Soil	MDAPISYAIVAGVFIAFAVICFAARAKRVAPKKEKPIGSPEEMKRSPT
Ga0310810_113499101	3300033412	Soil	MDAPISYAIVAGVFIALAVICFVARAKRLAPKKETPKRSAEEIKHSPA
Ga0370546_031112_648_758	3300034681	Soil	AFIAFAAILFGSRAKRLAKKKESPVGTPEEIKHSPA
Ga0373950_0071061_581_712	3300034818	Rhizosphere Soil	MDAPISYAIVAGVFIALAVICFVARAKRLVPKKETPKRSAEEIK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034984

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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