Metagenome / Metatranscriptome Family F034874

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034874
Family Type	Metagenome / Metatranscriptome
Number of Sequences	173
Average Sequence Length	44 residues
Representative Sequence	GSEVFVPVKDTTARTNYVALFGAIAQILASTVAIIVVVTR
Number of Associated Samples	110
Number of Associated Scaffolds	173

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.65 %
% of genes near scaffold ends (potentially truncated)	89.60 %
% of genes from short scaffolds (< 2000 bps)	90.17 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.850 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.728 % of family members)
Environment Ontology (ENVO)	Unclassified (42.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.243 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.18% β-sheet: 0.00% Coil/Unstructured: 58.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 173 Family Scaffolds
PF01370	Epimerase	20.81
PF05685	Uma2	7.51
PF00483	NTP_transferase	6.94
PF02706	Wzz	6.36
PF08241	Methyltransf_11	4.05
PF00150	Cellulase	2.89
PF04932	Wzy_C	2.31
PF13650	Asp_protease_2	2.31
PF12708	Pectate_lyase_3	1.73
PF10531	SLBB	1.16
PF04321	RmlD_sub_bind	1.16
PF02350	Epimerase_2	1.16
PF05050	Methyltransf_21	1.16
PF06283	ThuA	0.58
PF02894	GFO_IDH_MocA_C	0.58
PF00884	Sulfatase	0.58
PF14667	Polysacc_synt_C	0.58
PF01266	DAO	0.58
PF13807	GNVR	0.58
PF03808	Glyco_tran_WecG	0.58
PF13649	Methyltransf_25	0.58
PF14306	PUA_2	0.58
PF13560	HTH_31	0.58
PF02563	Poly_export	0.58
PF01408	GFO_IDH_MocA	0.58
PF13425	O-antigen_lig	0.58
PF00953	Glycos_transf_4	0.58
PF00534	Glycos_transf_1	0.58
PF05016	ParE_toxin	0.58
PF05635	23S_rRNA_IVP	0.58

COG ID	Name	Functional Category	% Frequency in 173 Family Scaffolds
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	7.51
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	6.36
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	6.36
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	6.36
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	6.36
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	2.89
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	2.89
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	2.31
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	2.31
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	2.31
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	2.31
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	1.16
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	1.16
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.58
COG1922	UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family	Cell wall/membrane/envelope biogenesis [M]	0.58
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.58
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	0.58
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.85 %
Unclassified	root	N/A	38.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.85 %
Unclassified	root	N/A	38.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.85 %
Unclassified	root	N/A	38.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.15 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.73 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.58 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.15 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	12.14 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.73 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.58 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.58 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.58 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.58 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.15 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	10.40 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	9.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.73 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.58 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.73 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.58 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.58 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	0.58 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.58 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.58 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.58 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.58 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	0.58 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.58 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.58 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10097233	Not Available	880	Open in IMG/M
3300005167\|Ga0066672_10212171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1237	Open in IMG/M
3300005179\|Ga0066684_10231816	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300005180\|Ga0066685_10155467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1557	Open in IMG/M
3300005184\|Ga0066671_10000984	All Organisms → cellular organisms → Bacteria → Proteobacteria	9135	Open in IMG/M
3300005184\|Ga0066671_10738981	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005446\|Ga0066686_10250939	Not Available	1194	Open in IMG/M
3300005446\|Ga0066686_10542461	Not Available	790	Open in IMG/M
3300005450\|Ga0066682_10779472	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005467\|Ga0070706_100722158	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005471\|Ga0070698_100256695	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300005471\|Ga0070698_101003673	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005536\|Ga0070697_101944352	Not Available	526	Open in IMG/M
3300005540\|Ga0066697_10013888	All Organisms → cellular organisms → Bacteria	4233	Open in IMG/M
3300005542\|Ga0070732_10583916	Not Available	678	Open in IMG/M
3300005545\|Ga0070695_101104658	Not Available	649	Open in IMG/M
3300005555\|Ga0066692_10555671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300005557\|Ga0066704_10252215	Not Available	1198	Open in IMG/M
3300005558\|Ga0066698_10547596	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005764\|Ga0066903_107754857	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006034\|Ga0066656_10688177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	658	Open in IMG/M
3300006791\|Ga0066653_10601463	Not Available	559	Open in IMG/M
3300006796\|Ga0066665_10766851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	763	Open in IMG/M
3300006796\|Ga0066665_11337694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300006804\|Ga0079221_11438231	Not Available	550	Open in IMG/M
3300006806\|Ga0079220_10877930	Not Available	692	Open in IMG/M
3300006854\|Ga0075425_102893992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300006871\|Ga0075434_101869587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300006903\|Ga0075426_10741863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	737	Open in IMG/M
3300006904\|Ga0075424_101042609	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300009012\|Ga0066710_100014647	All Organisms → cellular organisms → Bacteria	8276	Open in IMG/M
3300009012\|Ga0066710_100153809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3203	Open in IMG/M
3300009012\|Ga0066710_100442619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1947	Open in IMG/M
3300009012\|Ga0066710_100585162	Not Available	1692	Open in IMG/M
3300009012\|Ga0066710_100601231	Not Available	1668	Open in IMG/M
3300009012\|Ga0066710_104128324	Not Available	543	Open in IMG/M
3300009090\|Ga0099827_10903147	Not Available	765	Open in IMG/M
3300009090\|Ga0099827_11063386	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300009137\|Ga0066709_100020771	All Organisms → cellular organisms → Bacteria	6590	Open in IMG/M
3300009137\|Ga0066709_101656007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	911	Open in IMG/M
3300009137\|Ga0066709_101850176	Not Available	843	Open in IMG/M
3300009137\|Ga0066709_102920357	Not Available	630	Open in IMG/M
3300009137\|Ga0066709_103209808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300009137\|Ga0066709_104552908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300010128\|Ga0127486_1018239	Not Available	804	Open in IMG/M
3300010301\|Ga0134070_10185356	Not Available	758	Open in IMG/M
3300010303\|Ga0134082_10240121	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300010304\|Ga0134088_10223006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	905	Open in IMG/M
3300010304\|Ga0134088_10359927	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300010323\|Ga0134086_10069624	Not Available	1214	Open in IMG/M
3300010323\|Ga0134086_10495188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300010329\|Ga0134111_10131997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300010335\|Ga0134063_10005454	All Organisms → cellular organisms → Bacteria	4722	Open in IMG/M
3300010362\|Ga0126377_12466471	Not Available	596	Open in IMG/M
3300010396\|Ga0134126_10584834	Not Available	1279	Open in IMG/M
3300010399\|Ga0134127_13618589	Not Available	507	Open in IMG/M
3300010400\|Ga0134122_12005156	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300011271\|Ga0137393_11469904	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300011417\|Ga0137326_1008356	Not Available	2363	Open in IMG/M
3300012096\|Ga0137389_10507937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1034	Open in IMG/M
3300012142\|Ga0137343_1072878	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012189\|Ga0137388_10556516	Not Available	1066	Open in IMG/M
3300012189\|Ga0137388_11355042	Not Available	651	Open in IMG/M
3300012198\|Ga0137364_10547091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	871	Open in IMG/M
3300012199\|Ga0137383_10871126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	657	Open in IMG/M
3300012199\|Ga0137383_11111048	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012200\|Ga0137382_10048896	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300012200\|Ga0137382_10217055	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300012200\|Ga0137382_10807127	Not Available	675	Open in IMG/M
3300012200\|Ga0137382_10887324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	643	Open in IMG/M
3300012200\|Ga0137382_11002329	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012201\|Ga0137365_10332618	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300012201\|Ga0137365_11362962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300012202\|Ga0137363_11313071	Not Available	612	Open in IMG/M
3300012203\|Ga0137399_10503822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	1015	Open in IMG/M
3300012203\|Ga0137399_11124513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300012203\|Ga0137399_11803771	Not Available	500	Open in IMG/M
3300012204\|Ga0137374_10704175	Not Available	758	Open in IMG/M
3300012205\|Ga0137362_10790821	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012206\|Ga0137380_10397453	Not Available	1224	Open in IMG/M
3300012206\|Ga0137380_10411769	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300012206\|Ga0137380_11497733	Not Available	559	Open in IMG/M
3300012207\|Ga0137381_10398675	Not Available	1200	Open in IMG/M
3300012207\|Ga0137381_10704614	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	877	Open in IMG/M
3300012207\|Ga0137381_11025104	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012207\|Ga0137381_11054133	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012207\|Ga0137381_11701022	Not Available	521	Open in IMG/M
3300012208\|Ga0137376_10287810	Not Available	1426	Open in IMG/M
3300012208\|Ga0137376_10773322	Not Available	827	Open in IMG/M
3300012208\|Ga0137376_10832613	Not Available	794	Open in IMG/M
3300012208\|Ga0137376_11008018	Not Available	713	Open in IMG/M
3300012208\|Ga0137376_11321224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300012209\|Ga0137379_10003646	All Organisms → cellular organisms → Bacteria	14411	Open in IMG/M
3300012209\|Ga0137379_10401157	All Organisms → cellular organisms → Bacteria → Proteobacteria	1281	Open in IMG/M
3300012209\|Ga0137379_11722933	Not Available	523	Open in IMG/M
3300012210\|Ga0137378_11326007	Not Available	635	Open in IMG/M
3300012210\|Ga0137378_11765552	Not Available	523	Open in IMG/M
3300012211\|Ga0137377_10107006	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300012211\|Ga0137377_10748198	Not Available	911	Open in IMG/M
3300012211\|Ga0137377_11053048	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300012349\|Ga0137387_10259462	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300012349\|Ga0137387_10517018	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300012351\|Ga0137386_10320277	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300012351\|Ga0137386_10874245	Not Available	645	Open in IMG/M
3300012354\|Ga0137366_11195929	Not Available	517	Open in IMG/M
3300012356\|Ga0137371_10370068	Not Available	1113	Open in IMG/M
3300012356\|Ga0137371_10412767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1046	Open in IMG/M
3300012356\|Ga0137371_10548539	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300012356\|Ga0137371_10684020	Not Available	785	Open in IMG/M
3300012356\|Ga0137371_10806604	Not Available	715	Open in IMG/M
3300012357\|Ga0137384_10535379	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300012359\|Ga0137385_10880602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300012359\|Ga0137385_10959618	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012359\|Ga0137385_11272119	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300012917\|Ga0137395_11138460	Not Available	550	Open in IMG/M
3300012917\|Ga0137395_11170988	Not Available	540	Open in IMG/M
3300012929\|Ga0137404_12202004	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012944\|Ga0137410_10602185	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012944\|Ga0137410_10761799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	810	Open in IMG/M
3300012975\|Ga0134110_10018793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2663	Open in IMG/M
3300012975\|Ga0134110_10365880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300012976\|Ga0134076_10565066	Not Available	527	Open in IMG/M
3300012977\|Ga0134087_10628868	Not Available	560	Open in IMG/M
3300014150\|Ga0134081_10165457	Not Available	734	Open in IMG/M
3300014166\|Ga0134079_10300170	Not Available	713	Open in IMG/M
3300014872\|Ga0180087_1040918	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300015241\|Ga0137418_10016249	All Organisms → cellular organisms → Bacteria	6877	Open in IMG/M
3300015245\|Ga0137409_10137892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2240	Open in IMG/M
3300015358\|Ga0134089_10291253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300015358\|Ga0134089_10418288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300015358\|Ga0134089_10424524	Not Available	571	Open in IMG/M
3300015359\|Ga0134085_10073275	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300015359\|Ga0134085_10430815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300017654\|Ga0134069_1367303	Not Available	518	Open in IMG/M
3300017656\|Ga0134112_10147100	Not Available	905	Open in IMG/M
3300018071\|Ga0184618_10034604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1757	Open in IMG/M
3300018076\|Ga0184609_10059671	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300018431\|Ga0066655_10043251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2279	Open in IMG/M
3300018431\|Ga0066655_10072168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1854	Open in IMG/M
3300018431\|Ga0066655_10845907	Not Available	623	Open in IMG/M
3300018433\|Ga0066667_11008227	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300018433\|Ga0066667_11469808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300018482\|Ga0066669_10478890	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1074	Open in IMG/M
3300018482\|Ga0066669_10522423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1030	Open in IMG/M
3300019259\|Ga0184646_1133914	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300020018\|Ga0193721_1055628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1038	Open in IMG/M
3300021510\|Ga0222621_1004622	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300022694\|Ga0222623_10039197	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300025324\|Ga0209640_10821365	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300025910\|Ga0207684_10955449	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300025922\|Ga0207646_10257452	Not Available	1577	Open in IMG/M
3300025922\|Ga0207646_10595894	Not Available	992	Open in IMG/M
3300025922\|Ga0207646_10728048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300026296\|Ga0209235_1204976	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300026296\|Ga0209235_1215182	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	632	Open in IMG/M
3300026297\|Ga0209237_1080043	All Organisms → cellular organisms → Bacteria → Proteobacteria	1500	Open in IMG/M
3300026332\|Ga0209803_1285740	Not Available	565	Open in IMG/M
3300026334\|Ga0209377_1292795	Not Available	540	Open in IMG/M
3300026343\|Ga0209159_1054048	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300026537\|Ga0209157_1296570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300026540\|Ga0209376_1041747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2729	Open in IMG/M
3300027842\|Ga0209580_10168431	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300027846\|Ga0209180_10279697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	958	Open in IMG/M
3300027857\|Ga0209166_10536957	Not Available	598	Open in IMG/M
3300027903\|Ga0209488_10664252	Not Available	750	Open in IMG/M
3300027903\|Ga0209488_10775792	Not Available	681	Open in IMG/M
3300031015\|Ga0138298_1531131	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031576\|Ga0247727_10732757	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300031949\|Ga0214473_12103228	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300032897\|Ga0335071_10795810	Not Available	894	Open in IMG/M
3300034090\|Ga0326723_0524314	Not Available	545	Open in IMG/M
3300034164\|Ga0364940_0041754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1218	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.69%
Host-Associated	Host-Associated	2.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.06%
Aquatic	Environmental → Aquatic	4.62%
Plants	Host-Associated → Plants	2.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.33%
Sediment	Environmental → Aquatic → Sediment	4.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.31%
Freshwater	Environmental → Aquatic → Freshwater	0.58%
Peat	Environmental → Terrestrial → Peat	0.58%
Cave	Environmental → Terrestrial → Cave	0.58%
Floodplain	Environmental → Terrestrial → Floodplain	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.39%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.58%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.16%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.58%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.58%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.16%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.16%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.58%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.58%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.58%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012142	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT499_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100972331	3300002558	Grasslands Soil	NPSPGPGSEVYVPAKDPNAPHTDTVALFGAIAQILASTVAIIVIAKR*
Ga0066672_102121711	3300005167	Soil	SEVFVPAKDSTERTNYVALVGAVAQILASTVAIIVVLRR*
Ga0066684_102318161	3300005179	Soil	FGASDPKPGPGSEVFVPARDSTERTNYVALVGAVAQILASTVAIIVVLRR*
Ga0066685_101554672	3300005180	Soil	GPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIVVVVTR*
Ga0066671_100009841	3300005184	Soil	PKPGPGSEVFVPVRDSTERTNYVALVGAVAQILASTVAIIVVLRR*
Ga0066671_107389811	3300005184	Soil	SDPKPGPGSEVFVPVRDSTEKTNYVALVGAVAQILASTVAIIVVLRR*
Ga0066686_102509391	3300005446	Soil	GPKPGPGSEVFVPVKDTTGRTNYVALFGAIAQILASTVAIIVVVTR*
Ga0066686_105424612	3300005446	Soil	GSEVLAPAKDTTEKTNYVAPVRGIAQILASMVAIIVVVTR*
Ga0066682_107794721	3300005450	Soil	PGPGSEVLVPVKDTTAGTNYVALFGAIAQILVSMVAIVVVVTR*
Ga0066681_107595201	3300005451	Soil	TSDPQPGPGSEVYVPAEDPNQKRTDYVSLFGAVAQILASTIAIIVVVRK*
Ga0070706_1007221582	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNARGSLGAIGPGSKVMVPLKYISNPTNYVTLVAEVAQILASTVAIIVVATKL*
Ga0070698_1002566951	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SILGTSDPRPGPGSEVFVPAKDTTDRTNYVALFGAIAQILASTVAIIVVVTRK*
Ga0070698_1010036731	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SDPSPGPGSEVMVPVKDLANPTNYVALVSAIAQILASTVAIIVVARRL*
Ga0070697_1019443521	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EVSVPAADPTVRKTDYVALFGAIAQILASAVTIVVVATKL*
Ga0066697_100138881	3300005540	Soil	RPGPGAEVMVPAKDPTAPHTDYVALFGAIAQVLASTVAIIVVATKL*
Ga0070732_105839162	3300005542	Surface Soil	SEVFVPPTDPNAPHTDYVALFGAIAQILASTVAIIVVAVKG*
Ga0070695_1011046582	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PGSEVLVPAKDPSAPHTDMVALFGAIAQILASTVAIIVVATK*
Ga0066692_105556712	3300005555	Soil	DPGPGPGSEVVVPVKDTTAGTNYVALFGAMAQILASMVAIIVVVTR*
Ga0066704_102522152	3300005557	Soil	LFFRSDPAPGPGSEINVPLKDTTNPTNYTALFGAIAQILASTVAIIVIATKL*
Ga0066698_105475961	3300005558	Soil	PGPGPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0066903_1077548571	3300005764	Tropical Forest Soil	KGHGLFHGDPKPGPGSEVFVPAEDPTAHKTDYVALFGAIAQILASAVTIAVVVTKL*
Ga0066656_106881771	3300006034	Soil	VPVKDTTAGTNYVALFGAMAQVLASMVAIVVVVTR*
Ga0066653_106014631	3300006791	Soil	PGSEVFVPTKDPNTPHTDTVALFAAIAQILASTVAIIVVARRL*
Ga0066665_107668511	3300006796	Soil	KDPNAPKTDTVALFGAIAQILASSVAIIVVVTRR*
Ga0066665_113376942	3300006796	Soil	AKDPTAPHTDYVALFGAVAQILASSVAIIVVLRR*
Ga0079221_114382311	3300006804	Agricultural Soil	GSEVFVPVKDTTARTNYVALFGAIAQILASTVAIIVVVTR*
Ga0079220_108779301	3300006806	Agricultural Soil	EVLVPAKDPNAPHTDMVALFGALAQILASTVAIIVVATK*
Ga0075425_1028939922	3300006854	Populus Rhizosphere	PGSEVLVPAKDPNAPHTDTVALFGAIAQILASTVAIIVIAKR*
Ga0075434_1018695872	3300006871	Populus Rhizosphere	FFSNDPKPGPGSEVYVPPKDLTAPHTDYVALFGAIAQILASTVAIIVVAKQ*
Ga0075426_107418631	3300006903	Populus Rhizosphere	SSPTPGPGSEVFVPTKDLSHPTDKVALFSAIAQILASTLTIIVVARRL*
Ga0075424_1010426092	3300006904	Populus Rhizosphere	VPWAGSEVFVLVKNTSNKTNYVALFGAMAQILASTVAIIGVVTQ*
Ga0066710_1000146479	3300009012	Grasslands Soil	GPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR
Ga0066710_1001538095	3300009012	Grasslands Soil	VPAKDPNAAHTDYVALFGAIAQVLASTVAIIVVATKL
Ga0066710_1004426193	3300009012	Grasslands Soil	VPAKGPNAAHTGYVALFGAIAQVLASPLAIIVVDTK
Ga0066710_1005851621	3300009012	Grasslands Soil	VPFKDPNAPHTDTVALVGAIAQILASTEAIIVVARRL
Ga0066710_1006012311	3300009012	Grasslands Soil	PVKDTANPTNYTALFGAIAQILSSTVAIIVVATKL
Ga0066710_1041283241	3300009012	Grasslands Soil	PQPGPGSEVFVPTKDLTRHTDYVALFGAIAQILASTVAIIVVATRL
Ga0099827_109031471	3300009090	Vadose Zone Soil	RRRSIFGGGDPRPGPGSEVFVPSRDTTDRTNYVALFGAIAQILASTVAIIVVVTRK*
Ga0099827_110633862	3300009090	Vadose Zone Soil	RNDPAPGPGSEVNVPLKDTSNPTNYTALFGAIAQILASTVAIIVVATKL*
Ga0066709_1000207717	3300009137	Grasslands Soil	EVFGPVKDPTAGGNYVALFGAIAQILASAIAVVGIATR*
Ga0066709_1016560071	3300009137	Grasslands Soil	VTVLVKDMSNPTNYVALFGAIAQILASTVAIIVVATKL*
Ga0066709_1018501761	3300009137	Grasslands Soil	PLKDMSNPTNKVALFGAIAQILASTVAIIVVATKL*
Ga0066709_1029203571	3300009137	Grasslands Soil	RSSSTAIRSPGLGLEVFVPVRDTTEKTNYPALVGGIAQILASMVAIIVVVTR*
Ga0066709_1032098081	3300009137	Grasslands Soil	LYVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0066709_1045529082	3300009137	Grasslands Soil	LKDMSNPTNWVALIGSIAQIVASTVAILVVATKL*
Ga0127486_10182392	3300010128	Grasslands Soil	IFRSDPAPGPGSEVTVPLRDTSNPTNYATLLGAIAQILASTLAIIVVATKL*
Ga0134070_101853562	3300010301	Grasslands Soil	VPVKDTTARTNYVALFGAIAQILASTVAIIVVVTR*
Ga0134082_102401212	3300010303	Grasslands Soil	GSEVTVPLKDTSNPTNKVALFGAIAQSLASTVAIIVVATKL*
Ga0134088_102230061	3300010304	Grasslands Soil	PAPGPGSEVFVPVRDTTEKTNYVQLFGSIAQILMSTIAIIVVATR*
Ga0134088_103599273	3300010304	Grasslands Soil	FFKSDPGPGPGSDVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0134086_100696242	3300010323	Grasslands Soil	LFSSNPAPGPGSEVLVPFKDPNAPHTDTVALVGAIAQILASTVAIIVVARRF*
Ga0134086_104951881	3300010323	Grasslands Soil	SEVLVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0134111_101319971	3300010329	Grasslands Soil	GSEVFVPVRDTTQHVNYVQLIVGIAQIIASTIAIIVVATK*
Ga0134063_100054546	3300010335	Grasslands Soil	FFNSDPGPGPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0126377_124664711	3300010362	Tropical Forest Soil	LFATTPRPVPGSEVFVTAEGPTTWKTDYIVLFGAIAQILANTVAIIMFATR*
Ga0134126_105848341	3300010396	Terrestrial Soil	GSEVNVPLKDTSNPTNYTALFGAIAQILASTVAIIVVATKL*
Ga0134127_136185892	3300010399	Terrestrial Soil	PAKDPAEPKTDMVALFGAIAQILASTVAIIVVATQ*
Ga0134122_120051562	3300010400	Terrestrial Soil	PAEDPNAKKTDYVSLFGAIAQILASTIAIIVVLRR*
Ga0137393_114699041	3300011271	Vadose Zone Soil	LLFSSNPAPGPGSEVLVPFKDPNAPHTDTVALVGAIAQILA
Ga0137326_10083561	3300011417	Soil	SGLLTSNNPKPGPGSEVMVPAKDPAEPKTDMVALFGAIAQILASTVAIIVVVTQ*
Ga0137389_105079372	3300012096	Vadose Zone Soil	GPGSEVFVPVKDTTHTTNYVALFGSIAQILASTIAIIVVIRRP*
Ga0137343_10728781	3300012142	Soil	SNPEPGPGSEVFVPAKDSTAHTDWVAMAGAIAQILAATVAIIVVATQ*
Ga0137388_105565161	3300012189	Vadose Zone Soil	DPKPGPGSEVTVPLKDTSNPTNYVALFGAIAQILASTVAIIVVATKL*
Ga0137388_113550422	3300012189	Vadose Zone Soil	APGPGSEVLVPFKDPNAPHTDTVALVGAIAQILASTVAIIGVARRF*
Ga0137364_105470911	3300012198	Vadose Zone Soil	PGPGSDVTVPLRDTSNPTNWVALIGSIAQILASTVAILVVATKL*
Ga0137383_108711261	3300012199	Vadose Zone Soil	PGPGSEVFVPVRDSPERTNYVALVGAVAQILASTVAIIVVLRR*
Ga0137383_111110481	3300012199	Vadose Zone Soil	TPGPGSDVTVPLKDTSNPTNWVALIGSIAQILASTVAILVVATKL*
Ga0137382_100488965	3300012200	Vadose Zone Soil	FSSNPAPGPGSEVFVPTKDPNAPHTDTVALFGAIAQILASTVAIIVVVTR*
Ga0137382_102170552	3300012200	Vadose Zone Soil	RSDPKPGPGSEVTVPLKDTSNPTNYAALIGAIAQILASTVAIIVVATKL*
Ga0137382_108071272	3300012200	Vadose Zone Soil	VRVPLKDTSNPTNYVALFGAIAQILASTVAIIVVARRL*
Ga0137382_108873242	3300012200	Vadose Zone Soil	NPMPGPGSEILVPFKDPNAPRTDTVALFGAIAQILASTVAIIVIAKR*
Ga0137382_110023293	3300012200	Vadose Zone Soil	GSEVVVPVRDTSNPTNKVALFGAIAQILASTVAIIAIATKL*
Ga0137365_103326183	3300012201	Vadose Zone Soil	LKDPNAPHTDYVSLFGAIAQILASTVAIIVVATR*
Ga0137365_113629621	3300012201	Vadose Zone Soil	VTVPAEDPNQKKTDYVSLIGAVAQILASTVAIIVVVTR*
Ga0137363_113130712	3300012202	Vadose Zone Soil	APGPGSEVNVPLKDTSNPTNYTALFGAIAQILASTVAIIVIATKL*
Ga0137399_105038222	3300012203	Vadose Zone Soil	SSPTPGPGSEVLVPFKDPNAPHTDTVALFGAIAQILASTVAIIVIAKR*
Ga0137399_111245132	3300012203	Vadose Zone Soil	PKPGPGSEVSVPAKDANAPHTDTVALFGAIAQILASTVAIIVIARRF*
Ga0137399_118037711	3300012203	Vadose Zone Soil	SEVVVPGKDPNAPKTDKVAMAGAIAQILASMVAIIVVVTNK*
Ga0137374_107041751	3300012204	Vadose Zone Soil	AEDPNAKKTDYVSLFGAVAQILASTIAIIVVVKR*
Ga0137362_107908212	3300012205	Vadose Zone Soil	PAPGPGSEVLVPAKDPNAPRTDTVALVGAIAQILASTVAIIVVARRF*
Ga0137380_103974531	3300012206	Vadose Zone Soil	GSQVHVPAKDPNAPRTDMVALFGAIAQILASTVAIIVVATR*
Ga0137380_104117692	3300012206	Vadose Zone Soil	VLLFFRSTLTPGPGSEITVPAKDLSHPADYVALFGAIAQILTSTVAIIFIIKKA*
Ga0137380_114977332	3300012206	Vadose Zone Soil	SEVIVPMRDTTQHVNYVQLVGGIAQIIASTIAIIVVARK*
Ga0137381_103986752	3300012207	Vadose Zone Soil	GPKPGPGSEVFVPVKDTTARTNYVALFGAIAQILASTVAIVVVVTR*
Ga0137381_107046142	3300012207	Vadose Zone Soil	VVVPAKDPNAPHTDMVSLFGAIAQILASTVAIIVVATR*
Ga0137381_110251041	3300012207	Vadose Zone Soil	KPGPGSQVHVPAKDPNAPRTDMVALFGAIAQILASTVAIIVVATR*
Ga0137381_110541331	3300012207	Vadose Zone Soil	KPGPGSQVHVPAKDPNAPRTDMVALFGAIAQILVSTVAIIVVVTR*
Ga0137381_117010221	3300012207	Vadose Zone Soil	PGPGSEVVVPVKDTSNPTNKVALFGAIAQILASTVAIIAIATKL*
Ga0137376_102878101	3300012208	Vadose Zone Soil	VPLKDTSNPTNYAGLFGAIAQILASTVAIIVVATKL*
Ga0137376_107733221	3300012208	Vadose Zone Soil	NPTPGPGSEVVVPFRDPNAPKTDTVALFGAIAQILASTVAIIVIATRR*
Ga0137376_108326132	3300012208	Vadose Zone Soil	NPGPGSEVMVPVKDLSNPTNYVALVSAIAQILASTIAIVVVARKL*
Ga0137376_110080181	3300012208	Vadose Zone Soil	SEVMVPVKDLSNPTNYVALVSAIAQILASTIAIVVVARRL*
Ga0137376_113212242	3300012208	Vadose Zone Soil	VPAKDPNAPHTDTVALVGAIAQILASTVAIIVVARRF*
Ga0137379_100036461	3300012209	Vadose Zone Soil	VHVPAKDPNAPRTDMVALFGAIAQILASTVAIIVVATR*
Ga0137379_104011573	3300012209	Vadose Zone Soil	GPGSQVHVPAKDPNAPRTDMVALFGAIAQILASTVAIIVVATR*
Ga0137379_117229332	3300012209	Vadose Zone Soil	LFTSSPTPGPGAEVFVPVKDLSHPTDYVALFGAVAQILSASLAMILIAKKF*
Ga0137378_113260072	3300012210	Vadose Zone Soil	PGSEVFVPAKDPNAPHTDMVSLFGAIAQILASTVAIIVVATR*
Ga0137378_117655521	3300012210	Vadose Zone Soil	PKPGPGAEVTVPLKDTSNPTNYASLFGAIAQILASTVAIIVVATKL*
Ga0137377_101070061	3300012211	Vadose Zone Soil	TVPLKDMSNPTNKVALFGAIAQILASTVAIIVVATKL*
Ga0137377_107481982	3300012211	Vadose Zone Soil	LFVSSDPRPGPGSEIVVPVKDTSNPTNKVALFGAIAQILASTVAIIAIATKL*
Ga0137377_110530482	3300012211	Vadose Zone Soil	VPFKDPNAPHTDYVSLFGAIAQILASTVAIIVVATR*
Ga0137387_102594621	3300012349	Vadose Zone Soil	PGPGSEVMVPVRDTTEKTNYVALFGAIAQILASTVAIIVVATR*
Ga0137387_105170182	3300012349	Vadose Zone Soil	DPRPGPGSEVVVPAKDPNAPRTDYVTLFGAIAQILASTVAIIVVATR*
Ga0137386_103202773	3300012351	Vadose Zone Soil	SEVVVPAKDPNAPHTDMVSLFGAIAQILASTVAIIVVATR*
Ga0137386_108742451	3300012351	Vadose Zone Soil	AKDPNAPRTDMVALFGAIAQILASTVAIIVVATR*
Ga0137366_111959291	3300012354	Vadose Zone Soil	PVKDTTARVNYVALFGAIAQILASTVAIIVVVTR*
Ga0137371_103700683	3300012356	Vadose Zone Soil	SQVHVPAKDPNAPRTDMVALFGAIAQILASTVAIIVVATR*
Ga0137371_104127672	3300012356	Vadose Zone Soil	GSEVLVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0137371_105485391	3300012356	Vadose Zone Soil	SEVVVPFKDPNAPHTDYVSLFGAIAQILASTVAIIVVATR*
Ga0137371_106840201	3300012356	Vadose Zone Soil	SEVFVPVKDTTARTNYVALFGAIAQIVASTVAIIVVVTR*
Ga0137371_108066041	3300012356	Vadose Zone Soil	PGPGSEVTVPAEDPNQKRTDYVSLFGAVAQILASTVAIIVVVTRK*
Ga0137384_105353791	3300012357	Vadose Zone Soil	VPLKDTSNPTNYAALIGAIAQILASTVAIIVVATKL*
Ga0137385_108806021	3300012359	Vadose Zone Soil	GPGSEVMVPVRDTTEKTNYVALFGAIAQILASTVAIIVVATR*
Ga0137385_109596182	3300012359	Vadose Zone Soil	HVPAKDPNAPRTDMVALFGAIAQILASTVAIIVVVTR*
Ga0137385_112721192	3300012359	Vadose Zone Soil	SPGPGSEVFVPAKDPNAPHTDTVALFGAIAQILASTVAIIVIATR*
Ga0137395_111384601	3300012917	Vadose Zone Soil	DPRPGPGSEVFVPAKDTTDRTNYVALFGAIAQILASTVAIIVVVTRK*
Ga0137395_111709882	3300012917	Vadose Zone Soil	SDPRPGPGSEVVVPVRDTSNPTNKVALFGAIAQILASTVAIIAIATKL*
Ga0137404_122020041	3300012929	Vadose Zone Soil	MTVPPKDTSTPTNYVALFVAMAQILASTVAIIVVATKL
Ga0137410_106021852	3300012944	Vadose Zone Soil	SDPAPGPGSEVNVPLKDTSNPTNYTALFGAIAQILASTVAIVVIATKF*
Ga0137410_107617992	3300012944	Vadose Zone Soil	VPAQDPNAKKTDYVSLFGAVAQILASTIAIIVVVRR*
Ga0134110_100187931	3300012975	Grasslands Soil	LFFKSDPGPGPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0134110_103658802	3300012975	Grasslands Soil	VFVPARDSTDKTNYVALFGAIAQILASTVAIIVVATK*
Ga0134076_105650662	3300012976	Grasslands Soil	SLFFSSNPSPGPGSEVFVPFRDPTAPKTDTVALVSAIAQILASTVAIIVVARRL*
Ga0134087_106288681	3300012977	Grasslands Soil	VFVPVKDTTARTNYVALFGAIAQILASTVAIIVVVTR*
Ga0134081_101654572	3300014150	Grasslands Soil	RSDPKPGPGSEVTVPLRDTSNPTNYAGLFGAIAQILASTVAIIVVATKL*
Ga0134079_103001701	3300014166	Grasslands Soil	GPGSEVFVPPKDLTAPHTDYVALFAAIAQILASTVAIIVVAKQ*
Ga0180087_10409181	3300014872	Soil	PEPGPGSEVFVPAKDSTAHTDWVAMAGAIAQILAATVAIIVVATQ*
Ga0137418_100162498	3300015241	Vadose Zone Soil	FFPSDPTPGPGSEVFVPSEDPNAKKTDYVSLFGAIAQIFASTIAVTVSPPQ*
Ga0137409_101378925	3300015245	Vadose Zone Soil	EVFVPLKDPGDKGTDYVQVVGSIAQILMSAIAIIVVVRR*
Ga0134089_102912531	3300015358	Grasslands Soil	SDPGPGPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR*
Ga0134089_104182882	3300015358	Grasslands Soil	KSDPGPGPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIVVVVTR*
Ga0134089_104245241	3300015358	Grasslands Soil	VPLKDTSNPTNYVALFGAIAQILASTVAIIVVATKL*
Ga0134085_100732753	3300015359	Grasslands Soil	LKDTSNPTNYAALFGAIAQILASTVAIIVIGTKL*
Ga0134085_104308152	3300015359	Grasslands Soil	RSDPKPGPGSEVTVPLKDTSNPTNYAALFGAIAQILASTVAIIVVATKL*
Ga0134069_13673031	3300017654	Grasslands Soil	SHLRPGPGSEVTVPLKYTSNPTNYVALFGAIAQILASTVAIIVVVTR
Ga0134112_101471003	3300017656	Grasslands Soil	SEVLAPAKDTTEKTNYVAPVRGIAQILASMVAIIVVVTR
Ga0184618_100346043	3300018071	Groundwater Sediment	VQDFRGGDPTPGPGSVIFMPAEDPNAKKTDYVSLVGGLAQILASTVAIIVVPRP
Ga0184609_100596715	3300018076	Groundwater Sediment	IFGGGDPTPGPGSEVSVPLADPNAKKTDYVSLVGGIVQILASTIAIIVVVRNKP
Ga0066655_100432513	3300018431	Grasslands Soil	DPGPGPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR
Ga0066655_100721683	3300018431	Grasslands Soil	GPGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIVVVVTR
Ga0066655_108459072	3300018431	Grasslands Soil	LEVTVPLRDTSNPTNYAALFGAIAQILASTVAIIVVATKL
Ga0066667_110082272	3300018433	Grasslands Soil	FRSDPAPGPGSEVSVPLKDTSHPTDKVALFGAIAQILASTVAIIVVATKL
Ga0066667_114698082	3300018433	Grasslands Soil	PGSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR
Ga0066669_104788901	3300018482	Grasslands Soil	HKFLFLRSDPKPGPGSEVTVPLKDMSNPTNKVALFGAIAQILASTVAIIVVATKL
Ga0066669_105224231	3300018482	Grasslands Soil	RTLFFKTDPGPGPGSEVFVPVKDTTAGTNYVALFGAIAQIMASTIAIVVIATR
Ga0184646_11339143	3300019259	Groundwater Sediment	PTPGPGSEVFVPAEDPNAKKTDYVSLFGAIAQILASTIAIIVVVRR
Ga0193721_10556281	3300020018	Soil	RGDPAPKPGSEVSVPLKDTSNPTNYAALVGAIAQILASTVAIILVARRF
Ga0222621_10046222	3300021510	Groundwater Sediment	VYVPAEDPNTKKMDYVSLFGAIAQILASTIAIIVVTKR
Ga0222623_100391974	3300022694	Groundwater Sediment	VSDPAPGPGSEVYVPAEDPNTKKMDYVSLFGAIAQILASTIAII
Ga0209640_108213651	3300025324	Soil	FLFFGGGAPAPGPGSEVFVPSKDPNAPRTDYVALFGAIAQIVASTVAIIVVVTR
Ga0207684_109554492	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNARGSLGAIGPGSKVMVPLKYISNPTNYVTLVAEVAQILASTVAIIVVATKL
Ga0207646_102574523	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	IRTKKGGPKPGPGSEVFVPVKDTTARTNYVALFGAIAQILASTVAIIVVVTR
Ga0207646_105958941	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RTKKGGPKPGPGSEVFVPVKDTTARTNYVALFGAIAQILASTVAIIVVVTR
Ga0207646_107280482	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPAKDPLAPDTEYVALFGAIAQVLASTVAIIVVVTKL
Ga0209235_12049762	3300026296	Grasslands Soil	RGDPNGSELTVRVKDTSHPTNYTVLLGAIAQILARTVAIIVVATKL
Ga0209235_12151822	3300026296	Grasslands Soil	VPAKDPNAPHTDDVALFGTIAQVLASTVAIVVVATKL
Ga0209237_10800433	3300026297	Grasslands Soil	PAKDPNAPHTDTVALFGAIAQILASTVAIIVIAKR
Ga0209803_12857402	3300026332	Soil	TRRRSIFGTSDPRPGQGSEVFVPAKDTTDRTNYVALFGAIAQILASTVAIIVVVTR
Ga0209377_12927951	3300026334	Soil	VPPKDPNAPHTDYVALVGAIAQVLASTLAIIAIAKP
Ga0209159_10540481	3300026343	Soil	PGPGSEVAVPMRDTTQHTNYVQLVGGIAQIIASTIAIIVVARK
Ga0209157_12965702	3300026537	Soil	SEVMVPVRDTTEKTNYVALFGTIAQILASTVAIIVVATR
Ga0209376_10417474	3300026540	Soil	GSEVFVPVKDTTAGTNYVALFGAMAQVLASMVAIIVVVTR
Ga0209580_101684312	3300027842	Surface Soil	GPGSEVFVPPTDPNAPHTDYVALFGAIAQILASTVAIIVVAVKG
Ga0209180_102796972	3300027846	Vadose Zone Soil	LSSEPRPGPGSEVFVPVKDTTHTTNYVALFGSIAQILASTIAIIVVIRRP
Ga0209166_105369571	3300027857	Surface Soil	VFVPAEDPNAPHTDYTALFGAIAQILASTVAIIVIAVKG
Ga0209488_106642521	3300027903	Vadose Zone Soil	FSSNPSPGPGSEVFVPTKDANTPHTDTVALFGAIAQILASTVAIIVIAKK
Ga0209488_107757923	3300027903	Vadose Zone Soil	SEVYVPAEDPNAKKTDYVSLFGAIAQILASTVAIIVVLRR
Ga0138298_15311311	3300031015	Soil	TTGFPPLFSSDPQSGPGSEVYVPPKDLTAPHTDYVALFGAIAQILASTVAIIVVAKQ
Ga0247727_107327573	3300031576	Biofilm	KPGPGSEVFVPAEDPSARRTDYVALFGALAQILASTVAIIVVVTR
Ga0214473_121032281	3300031949	Soil	FVPSEDPNARKTDKVALFGAIAQILASTVAIIVVVTR
Ga0335071_107958101	3300032897	Soil	TPGPGSEVYVPATDPNAPHTDYVALFGAIAQILAASVAIIVVAIKG
Ga0326723_0524314_54_173	3300034090	Peat Soil	VFVPAEDPTVHKTDYVALFGAIAQILASAVTIVVVATKL
Ga0364940_0041754_1048_1218	3300034164	Sediment	RGRGLFGGAPKPGPGSEVFVPAEDPSARRTDYVALFGAIAQILASAVTIVVVATKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034874

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences