Metagenome / Metatranscriptome Family F034299

Basic Information
Family ID	F034299
Family Type	Metagenome / Metatranscriptome
Number of Sequences	175
Average Sequence Length	46 residues
Representative Sequence	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLACALALHL
Number of Associated Samples	147
Number of Associated Scaffolds	175

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.86 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	89.71 %
Associated GOLD sequencing projects	141
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (68.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.857 % of family members)
Environment Ontology (ENVO)	Unclassified (34.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1GPIPI_02846570 2JGI12053J15887_105511402 3JGIcombinedJ51221_104387772 4Ga0058901_14841582 5Ga0070690_1002848971 6Ga0066388_1082779662 7Ga0070660_1009625901 8Ga0070659_1020095851 9Ga0070714_1019080062 10Ga0070738_103214431 11Ga0070734_105419691 12Ga0070735_105299102 13Ga0070716_1012231292 14Ga0070765_1020707881 15Ga0079220_109319781 16Ga0073928_110971672 17Ga0073928_111431102 18Ga0075436_1000087341 19Ga0105240_104959051 20Ga0105240_110617042 21Ga0105241_100181435 22Ga0126374_113851562 23Ga0126380_111712051 24Ga0126373_101208794 25Ga0126373_128768802 26Ga0099796_100371541 27Ga0074044_105296161 28Ga0126370_101051271 29Ga0126376_110458731 30Ga0126378_124101891 31Ga0126379_137271291 32Ga0126379_137353582 33Ga0134125_105575943 34Ga0134128_110288031 35Ga0134128_110349371 36Ga0126381_1001933821 37Ga0126381_1004297131 38Ga0126381_1013349533 39Ga0134126_100997521 40Ga0137389_113416701 41Ga0137363_114682861 42Ga0137399_100876334 43Ga0137362_102787391 44Ga0137384_106794631 45Ga0137396_101082401 46Ga0137419_101580583 47Ga0126369_116808201 48Ga0157373_112644462 49Ga0157369_101570851 50Ga0134081_100639851 51Ga0157379_100926641 52Ga0134073_100191341 53Ga0182041_100520251 54Ga0182033_101939903 55Ga0182040_101203083 56Ga0182040_119640311 57Ga0182037_101598031 58Ga0187820_10934662 59Ga0187806_13309381 60Ga0187809_101420641 61Ga0187779_105639141 62Ga0187778_104530381 63Ga0187777_101158901 64Ga0187782_110600751 65Ga0187766_102638281 66Ga0066667_100504251 67Ga0181506_11973721 68Ga0179592_100679531 69Ga0210385_112093722 70Ga0210390_111838301 71Ga0187846_104800401 72Ga0210402_120382562 73Ga0210410_108701172 74Ga0126371_122805621 75Ga0213880_100123033 76Ga0242658_10728481 77Ga0242658_12381122 78Ga0222756_10393211 79Ga0247776_100914361 80Ga0209171_105686051 81Ga0207693_108258041 82Ga0207663_101577883 83Ga0207657_105807612 84Ga0207702_107503761 85Ga0207702_114456182 86Ga0207641_100037181 87Ga0209688_10515671 88Ga0209239_100183813 89Ga0209687_10719261 90Ga0209802_10271274 91Ga0257176_10423352 92Ga0208366_10014624 93Ga0209527_11099991 94Ga0207826_10859392 95Ga0207862_10630361 96Ga0209060_103927851 97Ga0209167_102811232 98Ga0209169_100593651 99Ga0209062_12672972 100Ga0209168_102349421 101Ga0265338_106395741 102Ga0308309_116019982 103Ga0170834_1045514292 104Ga0170834_1089294921 105Ga0170824_1093311621 106Ga0170824_1162511931 107Ga0170819_105119272 108Ga0318516_102710071 109Ga0318541_102237462 110Ga0318538_100297911 111Ga0318538_102527872 112Ga0318538_105380231 113Ga0318573_100164791 114Ga0318515_104839291 115Ga0310915_104630042 116Ga0318555_101922621 117Ga0318542_103795021 118Ga0318561_102938502 119Ga0318574_103982921 120Ga0318572_100555141 121Ga0310686_1107077091 122Ga0318496_100806243 123Ga0318496_102812082 124Ga0318496_106493222 125Ga0318501_107838992 126Ga0318492_106186661 127Ga0307477_100330374 128Ga0307475_112993602 129Ga0318537_103112702 130Ga0318554_106461272 131Ga0318526_102644552 132Ga0318526_102948341 133Ga0318566_101281783 134Ga0318566_103204612 135Ga0318547_103381931 136Ga0318557_103136232 137Ga0318497_101087213 138Ga0318497_103461712 139Ga0307478_104647132 140Ga0318517_101806982 141Ga0306919_109419651 142Ga0306919_113922372 143Ga0318522_103404102 144Ga0318522_104116002 145Ga0318551_107116311 146Ga0318551_108696062 147Ga0318520_101517831 148Ga0310910_104431561 149Ga0310910_105945521 150Ga0318530_101207691 151Ga0318530_103048381 152Ga0318531_103256642 153Ga0318562_101771183 154Ga0318562_104677851 155Ga0318562_107377801 156Ga0318563_102642802 157Ga0318569_103727942 158Ga0318507_101271711 159Ga0310911_104672261 160Ga0318556_100712821 161Ga0318575_102370302 162Ga0318533_112575582 163Ga0318524_103111772 164Ga0318525_102777021 165Ga0307470_102554981 166Ga0307470_116011381 167Ga0307471_1008718363 168Ga0307471_1039940691 169Ga0335079_122847552 170Ga0335073_108490932 171Ga0310914_106084161 172Ga0318519_109643172 173Ga0310811_105562973 174Ga0314864_0003293_2784_2912 175Ga0370515_0305624_568_672
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. 1GPIPI_02846570 2JGI12053J15887_105511402 3Ga0058901_14841582 4Ga0070690_1002848971 5Ga0066388_1082779662 6Ga0070660_1009625901 7Ga0070659_1020095851 8Ga0070714_1019080062 9Ga0070738_103214431 10Ga0070734_105419691 11Ga0105240_104959051 12Ga0126374_113851562 13Ga0126380_111712051 14Ga0126373_128768802 15Ga0134125_105575943 16Ga0134128_110349371 17Ga0126381_1013349533 18Ga0137363_114682861 19Ga0137396_101082401 20Ga0187809_101420641 21Ga0242658_12381122 22Ga0209168_102349421 23Ga0265338_106395741 24Ga0170819_105119272 25Ga0307471_1039940691 26Ga0335079_122847552 27Ga0370515_0305624_568_672
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44 1Ga0318562_104677851 2JGI12053J15887_105511402 3JGIcombinedJ51221_104387772 4Ga0058901_14841582 5Ga0070659_1020095851 6Ga0070714_1019080062 7Ga0070738_103214431 8Ga0070734_105419691 9Ga0070735_105299102 10Ga0073928_110971672 11Ga0073928_111431102 12Ga0105240_104959051 13Ga0126374_113851562 14Ga0126370_101051271 15Ga0126376_110458731 16Ga0126378_124101891 17Ga0126379_137353582 18Ga0134125_105575943 19Ga0126381_1001933821 20Ga0126381_1013349533 21Ga0134126_100997521 22Ga0137363_114682861 23Ga0126369_116808201 24Ga0157373_112644462 25Ga0157379_100926641 26Ga0187820_10934662 27Ga0187809_101420641 28Ga0187779_105639141 29Ga0187778_104530381 30Ga0187766_102638281 31Ga0181506_11973721 32Ga0187846_104800401 33Ga0210410_108701172 34Ga0126371_122805621 35Ga0222756_10393211 36Ga0207657_105807612 37Ga0207702_107503761 38Ga0207641_100037181 39Ga0209687_10719261 40Ga0207826_10859392 41Ga0207862_10630361 42Ga0209167_102811232 43Ga0209169_100593651 44Ga0209168_102349421 45Ga0265338_106395741 46Ga0170834_1045514292 47Ga0318538_105380231 48Ga0310686_1107077091 49Ga0318526_102948341 50Ga0318497_103461712 51Ga0307470_102554981 52Ga0307471_1008718363 53Ga0307471_1039940691 54Ga0335079_122847552 55Ga0370515_0305624_568_672
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.78% β-sheet: 0.00% Coil/Unstructured: 47.22%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
e.8.1.1: DNA polymerase I	d3ncia2	3nci	0.76729
f.13.1.0: automated matches	d4hyja_	4hyj	0.73936
c.23.1.0: automated matches	d6wsha1	6wsh	0.73789
a.238.1.0: automated matches	d4atma_	4atm	0.73764
a.29.3.2: acyl-CoA oxidase C-terminal domains	d2ddha2	2ddh	0.73373

Pfam ID	Name	% Frequency in 175 Family Scaffolds
PF00486	Trans_reg_C	85.14
PF13307	Helicase_C_2	6.29
PF00814	TsaD	5.14
PF00498	FHA	1.14
PF00072	Response_reg	0.57
PF01695	IstB_IS21	0.57
PF11112	PyocinActivator	0.57

COG ID	Name	Functional Category	% Frequency in 175 Family Scaffolds
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	5.14
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	5.14
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.57

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	31.43 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	31.43 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.43 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.14 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.57 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.57 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.57 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.14 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.57 %
Tolypothrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae	1.14 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.57 %
Tolypothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix	1.14 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.57 %
Tolypothrix campylonemoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides	1.14 %
Unclassified	root	N/A	68.57 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.57 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1.14 %
Unclassified	root	N/A	68.57 %

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16979420	Not Available	1462	Open in IMG/M
3300001661\|JGI12053J15887_10551140	Not Available	549	Open in IMG/M
3300003505\|JGIcombinedJ51221_10438777	Not Available	529	Open in IMG/M
3300004120\|Ga0058901_1484158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	572	Open in IMG/M
3300005330\|Ga0070690_100284897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1180	Open in IMG/M
3300005332\|Ga0066388_108277966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	519	Open in IMG/M
3300005339\|Ga0070660_100962590	Not Available	721	Open in IMG/M
3300005366\|Ga0070659_102009585	Not Available	519	Open in IMG/M
3300005435\|Ga0070714_101908006	Not Available	580	Open in IMG/M
3300005531\|Ga0070738_10321443	Not Available	639	Open in IMG/M

Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	92.00%
Host-Associated	Host-Associated	8.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.00%
Plants	Host-Associated → Plants	8.00%
Terrestrial	Environmental → Terrestrial	88.00%

Habitat	Taxonomy	Distribution
Cave	Environmental → Terrestrial → Cave	0.57%
Freshwater	Environmental → Aquatic → Freshwater	2.29%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.29%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.57%
Soil	Environmental → Terrestrial → Soil	86.29%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.71%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	9.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.29%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.57%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.57%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.00%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.57%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.57%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.14%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.14%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M

Showing 1 to 10 of 147 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02846570	2088090014	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLLGNVWGGLACALALHLAWVLANLFRLEWWL
JGI12053J15887_105511402	3300001661	Forest Soil	MQPATQAWGFAAVRLLGTVVIGFGAGWLFGNPFGGLAAALALHLAWVLV
JGIcombinedJ51221_104387772	3300003505	Forest Soil	MQPATQAWLFAAGRLLATVLIGVGVGWLFGNPWGGLACALALHLAWVL
Ga0058901_14841582	3300004120	Forest Soil	MQPATQMWWFTIGRLFATVLVGLGVGWLFGNLGAGLAAALAVHLG
Ga0070690_1002848971	3300005330	Switchgrass Rhizosphere	MQPATQAWLFAAGRLLATVLVGLGAGWLFGNPWGGLACALAL
Ga0066388_1082779662	3300005332	Tropical Forest Soil	MQPATQAWWFAVGRLLGTALVGFVLGWLFGNVWIGLGIALALHLGWQLINL
Ga0070660_1009625901	3300005339	Corn Rhizosphere	MQPVAQVWWFATVRLFATVLIGLAVGWLFGNVWGGLAAALA
Ga0070659_1020095851	3300005366	Corn Rhizosphere	MQPATQAWWFAGVRLLGTVVLGLGVGWLFSKPWAGLACALVIHLA
Ga0070714_1019080062	3300005435	Agricultural Soil	VRAPLQPATQAWWFAAGRLVGTIATGLIVGAFLGRIWAGLACALTIHLAWQLTVLFRVEWWLR
Ga0070738_103214431	3300005531	Surface Soil	VRPQLQPATQAWWFAAGRLLGTVVAGLIAGALFGSIWTGLACA
Ga0070734_105419691	3300005533	Surface Soil	MEPATQAWWLAAGRFLVTVGLGSGIGWLFGSVWGGLACALAVH
Ga0070735_105299102	3300005534	Surface Soil	VRTQLQPATQAWWFAAGRLLATIAAGLVVGALLGRVWAGLACA
Ga0070716_1012231292	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLGWVLANLFRLEWWL
Ga0070765_1020707881	3300006176	Soil	MQPATQMWWFTIGRLFATVLVGLGVGWLFRNLCAGLAAALAVHLGWVL
Ga0079220_109319781	3300006806	Agricultural Soil	VRAPLQPATQAWWFAAGRLVGTIATGLIVGAFLGRIWAGLACALTIHLAWQLTVLFRVEW
Ga0073928_110971672	3300006893	Iron-Sulfur Acid Spring	MEPATQVWWFAAGRLLGTVLIGCTAGWLLGSTWGGLACALGLHLAWVLANLFRLEWWLRH
Ga0073928_111431102	3300006893	Iron-Sulfur Acid Spring	MQPATQAWWFAAGRLLATAVFGLVLGWLFGNVWIGLGVALALHLGWQLIN
Ga0075436_1000087341	3300006914	Populus Rhizosphere	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLTWVLANLFRLE
Ga0105240_104959051	3300009093	Corn Rhizosphere	MQPATQAWWFAAGRLLVTVLLGLGIGWVLGRPWAGLACALGVHLAWQLVNL
Ga0105240_110617042	3300009093	Corn Rhizosphere	MQPATQAWWFAAGRLLATALVGFVLGWLFGNVWIGLGVALALHLG
Ga0105241_100181435	3300009174	Corn Rhizosphere	MQPATQAWLFAAGRLLATVLVGLGAGWLFGNPWGGLACALALHLAWVLANLFR
Ga0126374_113851562	3300009792	Tropical Forest Soil	MQPATQAWWFAAGRLLGTVLLGTGVGWVFGTAWVGLAVALILHLAWVLI
Ga0126380_111712051	3300010043	Tropical Forest Soil	MQPATQAWWFAAGRLLGTALIGTGVGWLFGNSWLGLAIALI
Ga0126373_101208794	3300010048	Tropical Forest Soil	MEPATQAWWFAAGRLLGTVVVGCGVGWLLGNLWGGLAVALALH
Ga0126373_128768802	3300010048	Tropical Forest Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNLWGGLA
Ga0099796_100371541	3300010159	Vadose Zone Soil	MQPATQAWGFAAVRLLGTVVIGCGAGWLFGNPFGGLAAALALHLAWVLANLARLE
Ga0074044_105296161	3300010343	Bog Forest Soil	MEPATQAWWFAAVRLLGTVVVGCGVGWLFGNLWGGLAAALALH
Ga0126370_101051271	3300010358	Tropical Forest Soil	MQPATQAWWFAAGRLLGTVLVGAGVGWLFGNTGLGLAIALVLHLAWVL
Ga0126376_110458731	3300010359	Tropical Forest Soil	MEPATQVWWFAAGRLLATVVVGLGGGWLFGNPFGGLALA
Ga0126378_124101891	3300010361	Tropical Forest Soil	MQPATQMWWFTIGRLLATVLVGVGAGWLLGNLWAGLASALALHLGWVLANLFRLEWWL
Ga0126379_137271291	3300010366	Tropical Forest Soil	MEPGTQAWWFAAGRLLGTVVIGCGVGWLLGNVWGGLAVALALHLAWVLAN
Ga0126379_137353582	3300010366	Tropical Forest Soil	MQPATQAWWFAAGRLLVTVVIGCGVGWLLGNLWTGLAIALALHLTWVLA
Ga0134125_105575943	3300010371	Terrestrial Soil	VRAKLQPATQAWWFALGRLLATVAAGLIAGALLGRVWFGRACALAAHL
Ga0134128_110288031	3300010373	Terrestrial Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLGWVLANLFRLEWW
Ga0134128_110349371	3300010373	Terrestrial Soil	MQPATQAWWFAAGRLVFTLVLGLAIGWMLSNVWAGLACALTFH
Ga0126381_1001933821	3300010376	Tropical Forest Soil	MEPATQAWWLAAGRLLATVGLGCGVGWLFGTVWGGLACALALHLAWVLANL
Ga0126381_1004297131	3300010376	Tropical Forest Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLLGNLWGGLACALALHLTWVLTNLF
Ga0126381_1013349533	3300010376	Tropical Forest Soil	MQPATQMWWFTVGRVLATVVVGLGAGWLIGNLWAGL
Ga0134126_100997521	3300010396	Terrestrial Soil	VRIPLQPATQAWWFAAGRLLATVMAGLIAGAFLGSIWGGLACALAAHLT
Ga0137389_113416701	3300012096	Vadose Zone Soil	MQPATQAWWFAAGRLLGTVVLGLGIGWMFSSPWAGLAVALIIHLGWQLVNLF
Ga0137363_114682861	3300012202	Vadose Zone Soil	MVTQSMQPSTQAWWFAAGRMLATVLCGLVAGWLLGAVWVGLLIALALHLGW
Ga0137399_100876334	3300012203	Vadose Zone Soil	MQPATQAWGFAAVRLLGTVVIGCGAGWLFGNPFGGLAA
Ga0137362_102787391	3300012205	Vadose Zone Soil	MQPATQAWGFAAVRLLGTAVIGFGAGWLFGNPFGGLAAAL
Ga0137384_106794631	3300012357	Vadose Zone Soil	MQPATQAWGFAAVRLLGTVVIGCGVGWLFGNPWVGLAG
Ga0137396_101082401	3300012918	Vadose Zone Soil	MQPATQAWGFAAVRLLGTALIGFGAGWLFGNPFGGLA
Ga0137419_101580583	3300012925	Vadose Zone Soil	MQPATQAWGFAAVRLLGTALIGFGAGWLFGNPFGGLAAALALHLAWVLA
Ga0126369_116808201	3300012971	Tropical Forest Soil	MQPATQAWWFAAGRLLGTALVGTGVGWLFGNTWLGLAVALILHLAWVL
Ga0157373_112644462	3300013100	Corn Rhizosphere	MQPATQAWLFAAGRLLATVLVGLGAGWLFGNPFGGLAI
Ga0157369_101570851	3300013105	Corn Rhizosphere	MQPVAQVWWFATVRLLATVLIGLAIGWLFGNVWGGLAAALALNLS
Ga0134081_100639851	3300014150	Grasslands Soil	MQPATQAWGFAAVRLLGTVVIGCGAGWLFGNPSGGLAAALALHL
Ga0157379_100926641	3300014968	Switchgrass Rhizosphere	MQPATQAWWFAAGRLLGTVLLGLGIGWLLGSPWTGLACALGIHLAW
Ga0134073_100191341	3300015356	Grasslands Soil	MQPATQAWGLAAVRLLGTVVIGCGVGWLFGNPWVGLAGALALHL
Ga0182041_100520251	3300016294	Soil	MEPATQAWWFAAGRLLVTVVIGCGVGWLLGNLWGGLACALALHLAWVLSNLFRL
Ga0182033_101939903	3300016319	Soil	MEPATQAWWFAAGRLLGTVAIGCGAGWLLGNLWGG
Ga0182040_101203083	3300016387	Soil	MEPATQAWWFAAGRLLVTVVIGCGVGWLLGNLWGGLACALAL
Ga0182040_119640311	3300016387	Soil	MEPATQAWWLAAGRLLGTVAIGCGAGWLLGNLWGGLACALALH
Ga0182037_101598031	3300016404	Soil	VEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALAVHLSWALTNL
Ga0187820_10934662	3300017924	Freshwater Sediment	MEPATQVWWVAAGRLLATVVLGVGAGWLFGNPFGGLAIALA
Ga0187806_13309381	3300017928	Freshwater Sediment	MEPATQAWWFAAGRLLGTVVIGCGVGWLLGNVWGGLACA
Ga0187809_101420641	3300017937	Freshwater Sediment	LQLQPATQAWWFAAGRLLLTIAAGLIIGALLGRIWGGLACALAAHLTWQLV
Ga0187779_105639141	3300017959	Tropical Peatland	MEPATQAWWFAAGRLLGTVIVGCFAGWLFGNLWGGLAG
Ga0187778_104530381	3300017961	Tropical Peatland	MEPATQAWWFAAGRLLGTVLAGCGVGWWLDNLWAGLAAALAL
Ga0187777_101158901	3300017974	Tropical Peatland	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALA
Ga0187782_110600751	3300017975	Tropical Peatland	MEPATQAWWFAAGRLLGTVVVGCGVGWLFGNLWGGLAAALALHLTWVLVNLFRLEW
Ga0187766_102638281	3300018058	Tropical Peatland	MQPATQAWWFAAGRLLGTVSVGCLAGWLFGNVWGGLACALALHLTWLLVNLF
Ga0066667_100504251	3300018433	Grasslands Soil	MQPATQAWGFAAVRLLGTVVIGCGAGWLFGNPSGGLAAALALHLVWV
Ga0181506_11973721	3300019260	Peatland	MQPATQAWWFAAGRLLGTVVLGLGMGWMLSNVWAGLACALTLHLALQLAHL
Ga0179592_100679531	3300020199	Vadose Zone Soil	MQPATQAWGFAAVRLLGTAVIGFGAGWLFGNPFGGLAAALALHLAWVLA
Ga0210385_112093722	3300021402	Soil	MQPATQAWWFAAGRLLGTVVLGLGVGWMFSSPWAGLACAL
Ga0210390_111838301	3300021474	Soil	MQPATQAWLFAAGRLLATVLIGVGVGWLFGNPWGGLACALA
Ga0187846_104800401	3300021476	Biofilm	MQPATQAWGFAAARLLATVLIGLGGGALFGNPWGGLAVALALHLAWVLAN
Ga0210402_120382562	3300021478	Soil	MQPATQAWWFAAGRLLGTVVLGLGIGWMFSSPWAGLAVALIIHLAWQLVNLF
Ga0210410_108701172	3300021479	Soil	MQPATQAWWFAAGRLVFTLVLGLAIGWMLSNVWAGLACALTFHLAWFLANLFRL
Ga0126371_122805621	3300021560	Tropical Forest Soil	MEPATQAWWFAAGRLLATVVVGCGVGWLLGNLWAGLATALALHLTWVLTNLF
Ga0213880_100123033	3300021953	Exposed Rock	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLAWVLAN
Ga0242658_10728481	3300022530	Soil	MQPATQAWWFAAGRLLGTVVLGLAIGWLFSSPWAGLACALAIHLAWQLANLF
Ga0242658_12381122	3300022530	Soil	MQPATQAWWFAAGRLLGTVVLGLGIGWMFSSPWAGLAV
Ga0222756_10393211	3300022709	Soil	MQPATQAWWFAAGRLLATVVLGLGFGWLFGTPWAGLACAL
Ga0247776_100914361	3300023275	Plant Litter	MQPATQAWWFAVGRLLATGLVGFVVGWLFGNVWIGLGVALALHLGWQLINLFR
Ga0209171_105686051	3300025320	Iron-Sulfur Acid Spring	MEPATQVWWFAAGRLLGTVLIGCTAGWLLGSTWGGLACALGLHLAWVLANLF
Ga0207693_108258041	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLSWVLSNL
Ga0207663_101577883	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MEPATQAWWFAAGRLLGTVVIGCGVGWLLGNVWGG
Ga0207657_105807612	3300025919	Corn Rhizosphere	MQPVAQVWWFATVRLFATVLIGLAVGWLFGNVWGGLAAALALNLS
Ga0207702_107503761	3300026078	Corn Rhizosphere	MQPATQAWWFAAGRLLGTVILGMGIGFLFSRPWAGLAVA
Ga0207702_114456182	3300026078	Corn Rhizosphere	MQPATQAWWFAGVRLLGTVVLGLGVGWLFSSPWAGLACALV
Ga0207641_100037181	3300026088	Switchgrass Rhizosphere	MQPATQAWWFAVGRLLATALVGFVLGWLFGNVWIGLGIALALHLGWQ
Ga0209688_10515671	3300026305	Soil	MQPATQAWGLAAVRLLGTVVIGCGVGWLFGNPWVGLAGA
Ga0209239_100183813	3300026310	Grasslands Soil	MQPATQAWGFAAVRLLGTVVIGCGAGWLFGNPFGGLAAALALH
Ga0209687_10719261	3300026322	Soil	MQPATQAWGLAAVRLLGTVVIGCGVGWLFGNPWVGLAGALALHLVWVLVYLF
Ga0209802_10271274	3300026328	Soil	MQPATQAWGFAAVRLLGTVVTGCGVGWLFGNPWVGLAGALALHL
Ga0257176_10423352	3300026361	Soil	MQPATQAWGFAAVRLLGTALIGFGAGWLFGNPFGGLAAALALHLAWVLVN
Ga0208366_10014624	3300027073	Forest Soil	MQPATQAWGFAAVRLLGTVVIGCGAGWLFGNPFGGLAAALALHLAWVLANLARLEW
Ga0209527_11099991	3300027583	Forest Soil	MQPATQAWGFAAVRLLGTVVIGFGAGWLFGNPFGGLAAALALHLAWVLVYLARLEWWL
Ga0207826_10859392	3300027680	Tropical Forest Soil	VRSLEPATQAWWFAAGRLLGTVLVGSLAGWLFGNVWLGLACALALHLAWVLANLFRLEW
Ga0207862_10630361	3300027703	Tropical Forest Soil	MQPATQMWWFAAGRLFATVLVGLGAGWLLGNLWAGLACALGLHLAWVLANLF
Ga0209060_103927851	3300027826	Surface Soil	MQPATQMWWFTIGRLLATVLVGLGVGWAFGNVGAGLAAALAVHLG
Ga0209167_102811232	3300027867	Surface Soil	MQPATQMWWFTVGRVFATVLVGLAAGWLLGNLWAG
Ga0209169_100593651	3300027879	Soil	MQPATQAWWFAAGRLLGTVVLGLGIGWMFSSPWAGLACALIIHLAWQLVNLFR
Ga0209062_12672972	3300027965	Surface Soil	VRPQLQPATQAWWFAAGRLLGTVVAGLIAGALFGSIWTGLAC
Ga0209168_102349421	3300027986	Surface Soil	VRTPLQPATQAWLFAAGRLLATVVAGLIAGVLFGSIWGGLACALAIHLTWQL
Ga0265338_106395741	3300028800	Rhizosphere	MQPATQAWWFATARLFATVAVGAAVGWLFGSVWAGLALALAIHLD
Ga0308309_116019982	3300028906	Soil	MQPATQMWWFTIGRLFATVLVGLGVGWLFGNLGAGLAAALAVHLGWVL
Ga0170834_1045514292	3300031057	Forest Soil	MQPATQAWWFAAGRLLATALVGLVLGWMFANVWIGLGAALALHLGWQLIN
Ga0170834_1089294921	3300031057	Forest Soil	MQPATQAWWFAAGRLLGTVVLGLGIGWMFSSPWAGLAVALIIHLAWQLVN
Ga0170824_1093311621	3300031231	Forest Soil	MQPATHAWWFAVGRLLGTALVGFVLGWLFGNVWIGLGIALALHLGWTKE
Ga0170824_1162511931	3300031231	Forest Soil	MQPATQAWWFAAGRLLGTVVLGLGVGWMFSSPWAGLACALVIHLAWQL
Ga0170819_105119272	3300031469	Forest Soil	MQPATQAWWFAVGRLLATAMVGFVLGWLFANVWIGLGV
Ga0318516_102710071	3300031543	Soil	VEPATQAWWFAAGRLLGTVVIGCGAGWLLGNLWGGLACALAL
Ga0318541_102237462	3300031545	Soil	MEPATQAWWFAAGRLLGTVAIGCGAGWLLGNLWGGLACALALHLTWVLTNL
Ga0318538_100297911	3300031546	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNLWAGLACALA
Ga0318538_102527872	3300031546	Soil	VEPATQAWWFAAGRLLGTVVIGCGAGWLLGNLWGGLACALALHLTWVLTNLFRLE
Ga0318538_105380231	3300031546	Soil	MEPATQAWWLAAGRLLGTVAIGCGAGWLLGNLWGGLACALALHLTWVLTNL
Ga0318573_100164791	3300031564	Soil	MEPATQAWWFAAGRLLVTVVIGCGVGWLLGNLWGGLACALALHLAWVLSNLFRLEW
Ga0318515_104839291	3300031572	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHL
Ga0310915_104630042	3300031573	Soil	VEPATQAWWFAAGRLLGTVVIGCGAGWLLGNLWGGLAC
Ga0318555_101922621	3300031640	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGL
Ga0318542_103795021	3300031668	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLTWVLTNLFRLEWWL
Ga0318561_102938502	3300031679	Soil	VEPATQAWWFAAGRLLGTVVIGCGAGWLLGNLWGGLACALALH
Ga0318574_103982921	3300031680	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLAC
Ga0318572_100555141	3300031681	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALAL
Ga0310686_1107077091	3300031708	Soil	MQPATQAWWFAAGRLLGTVLFGAGIGWLLGRPWEGLACALTLHLAWVLANL
Ga0318496_100806243	3300031713	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLTWVL
Ga0318496_102812082	3300031713	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLTWVLTNLFRLEW
Ga0318496_106493222	3300031713	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLLGNVWGGLACALALHLT
Ga0318501_107838992	3300031736	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLTWVLTN
Ga0318492_106186661	3300031748	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLTWVLTNLFRLEWWL
Ga0307477_100330374	3300031753	Hardwood Forest Soil	MQPATQAWGFAAVRLLGTAVIGFGAGWLFGNPFGGLA
Ga0307475_112993602	3300031754	Hardwood Forest Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLFGNLWGGLACALALHLTWVLINLFR
Ga0318537_103112702	3300031763	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLA
Ga0318554_106461272	3300031765	Soil	MEPATQAWWFAAGRLLGTVAVGCGVGWLLGNLWAGLAVALALHL
Ga0318526_102644552	3300031769	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLACALALHLAWV
Ga0318526_102948341	3300031769	Soil	VEPATQAWWFAAGRLLGTVVIGCGAGWLLGNLWGGLAI
Ga0318566_101281783	3300031779	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLTWVLTNLFR
Ga0318566_103204612	3300031779	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGG
Ga0318547_103381931	3300031781	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLAC
Ga0318557_103136232	3300031795	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLTWVLTNV
Ga0318497_101087213	3300031805	Soil	MEPATQAWWFAAGRLLVTVVIGCGVGWLLGNLWGGLACALA
Ga0318497_103461712	3300031805	Soil	MESATQAWWFAAGRLLGTVVVGCGVGWLLGNLWGGLAI
Ga0307478_104647132	3300031823	Hardwood Forest Soil	MQPATQAWWFAAGRLLGTVVLGLGIGWMFSSPWAGLACALIIHLAWQLVNLF
Ga0318517_101806982	3300031835	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLACALALHLAWVLVN
Ga0306919_109419651	3300031879	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNLWGGLAC
Ga0306919_113922372	3300031879	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLACAL
Ga0318522_103404102	3300031894	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLA
Ga0318522_104116002	3300031894	Soil	MEPATQAWWFAAGRLLVTVVIGCGVGWLLGNLWGGLACALALH
Ga0318551_107116311	3300031896	Soil	MEPATQAWWFAAGRLLITVVIGCGVGWLLGNLWGGLACALALHLAWVLSNLF
Ga0318551_108696062	3300031896	Soil	MEPATQAWWFAAGRLLGTVAIGCGAGWLLGNVWGGLACALALHLT
Ga0318520_101517831	3300031897	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNLWGGLACALAL
Ga0310910_104431561	3300031946	Soil	VEPATQAWWFAAGRLLGTVVIGCGAGWLLGNLWGGLACALALHLTWVLTN
Ga0310910_105945521	3300031946	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALH
Ga0318530_101207691	3300031959	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLTWLLANLFRL
Ga0318530_103048381	3300031959	Soil	MEPATQAWWFAAGRLLGTVAVGCGVGWLLGNLWAGLAVALALHLTWVLTNLFRLEWW
Ga0318531_103256642	3300031981	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHL
Ga0318562_101771183	3300032008	Soil	MEPATQAWWFAAGRLLGTVAVGCGVGWLLGNLWAGLAVALALHLTW
Ga0318562_104677851	3300032008	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLACALALHL
Ga0318562_107377801	3300032008	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLLGNVWGGLACALALHLTWVLT
Ga0318563_102642802	3300032009	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLAC
Ga0318569_103727942	3300032010	Soil	MEPATQAWWFAAGRLLGTVVIGCGAGWLFGNVWGGLACALAVHLAWVLVNLF
Ga0318507_101271711	3300032025	Soil	MEPATQAWWLAAGRLLGTVAIGCGAGWLLGNLWGGLACALALHLTWVLT
Ga0310911_104672261	3300032035	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGLACALALH
Ga0318556_100712821	3300032043	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLTWLLANLFRLEW
Ga0318575_102370302	3300032055	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLTWLLANLF
Ga0318533_112575582	3300032059	Soil	MEPATQAWWFAAGRLLGTVAIGCGVGWLLGNVWGGLACALALHLTW
Ga0318524_103111772	3300032067	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLFGNVWGGL
Ga0318525_102777021	3300032089	Soil	MEPATQAWWFAAGRLLITVVIGCGVGWLLGNLWGGLACALALHLAWVLSN
Ga0307470_102554981	3300032174	Hardwood Forest Soil	MQPATQMWWFTVGRLLATVLAGLGAGWLFGNLWAGLACALALHLGWV
Ga0307470_116011381	3300032174	Hardwood Forest Soil	MQPATQAWLFAAGRLLATVLIGLGAGWLFGNLWGGLACALALHLAWVLAHLF
Ga0307471_1008718363	3300032180	Hardwood Forest Soil	MQPATQMWWFTIGRLFATVLVGLGAGWLLGNVWGGLACALA
Ga0307471_1039940691	3300032180	Hardwood Forest Soil	MHPAAQVWWFATVRLLATVLIGCAIGWLFGNVWVGLAVALALNLSWQLANLFRTD
Ga0335079_122847552	3300032783	Soil	MQPATQAWWFATGRTLATVLAGLLLGWLLGNVWAGLAVALALHLGWH
Ga0335073_108490932	3300033134	Soil	MQPATQAWWFAAGRLLGTVVFGLGIGWLFESPWAGLA
Ga0310914_106084161	3300033289	Soil	MEPATQAWWFAAGRLLGTVVIGCGVGWLLGNVWGGLACAL
Ga0318519_109643172	3300033290	Soil	MEPATQAWWFAAGRLLGTVAIGCGAGWLVGNLWGGLACALALHLTWVL
Ga0310811_105562973	3300033475	Soil	MQPATQAWWFAAGRLLGTVVLGLGIGWLFSSPWAGLAIALTLHLA
Ga0314864_0003293_2784_2912	3300033805	Peatland	MEPATQAWWFAAGRLLGTVVIGCGAGWLFGNLWGGLAAALALQ
Ga0370515_0305624_568_672	3300034163	Untreated Peat Soil	MQPATQSWWFAAGRLAFTIVIGCAVGWLFGSAWAG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034299

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences