NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F034124

Metagenome Family F034124

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F034124
Family Type Metagenome
Number of Sequences 175
Average Sequence Length 60 residues
Representative Sequence MTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILTFHVDPWE
Number of Associated Samples 140
Number of Associated Scaffolds 175

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.57 %
% of genes near scaffold ends (potentially truncated) 21.71 %
% of genes from short scaffolds (< 2000 bps) 70.29 %
Associated GOLD sequencing projects 127
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.571 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(16.571 % of family members)
Environment Ontology (ENVO) Unclassified
(24.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.23%    β-sheet: 0.00%    Coil/Unstructured: 64.77%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 175 Family Scaffolds
PF01425Amidase 38.29
PF00795CN_hydrolase 27.43
PF02653BPD_transp_2 9.14
PF00005ABC_tran 2.86
PF13458Peripla_BP_6 2.29
PF13561adh_short_C2 1.71
PF00857Isochorismatase 1.71
PF02361CbiQ 0.57
PF00941FAD_binding_5 0.57
PF09278MerR-DNA-bind 0.57
PF04185Phosphoesterase 0.57
PF07963N_methyl 0.57
PF10851DUF2652 0.57
PF01266DAO 0.57
PF13544Obsolete Pfam Family 0.57
PF12697Abhydrolase_6 0.57
PF07505DUF5131 0.57

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 175 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 38.29
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 1.71
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.71
COG0619ECF-type transporter transmembrane protein EcfTCoenzyme transport and metabolism [H] 0.57
COG0789DNA-binding transcriptional regulator, MerR familyTranscription [K] 0.57
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.57
COG4422Bacteriophage protein gp37Mobilome: prophages, transposons [X] 0.57


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.14 %
UnclassifiedrootN/A10.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105859711All Organisms → cellular organisms → Bacteria1923Open in IMG/M
3300000550|F24TB_12354948All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium592Open in IMG/M
3300002558|JGI25385J37094_10000617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium10027Open in IMG/M
3300002558|JGI25385J37094_10096875Not Available882Open in IMG/M
3300002560|JGI25383J37093_10122103All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium731Open in IMG/M
3300002561|JGI25384J37096_10007659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4024Open in IMG/M
3300002912|JGI25386J43895_10001593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5503Open in IMG/M
3300004062|Ga0055500_10047489Not Available853Open in IMG/M
3300004463|Ga0063356_100005291All Organisms → cellular organisms → Bacteria11172Open in IMG/M
3300004463|Ga0063356_104769658All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300004479|Ga0062595_101216419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium670Open in IMG/M
3300004479|Ga0062595_101672246All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300004480|Ga0062592_101211939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi706Open in IMG/M
3300005093|Ga0062594_100482496All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300005166|Ga0066674_10001538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00698146Open in IMG/M
3300005166|Ga0066674_10059045All Organisms → cellular organisms → Bacteria1744Open in IMG/M
3300005167|Ga0066672_10540734All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300005176|Ga0066679_10383967All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300005181|Ga0066678_10864990All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300005332|Ga0066388_100036599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4753Open in IMG/M
3300005332|Ga0066388_102660957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales912Open in IMG/M
3300005334|Ga0068869_100018028All Organisms → cellular organisms → Bacteria4799Open in IMG/M
3300005341|Ga0070691_10131951All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300005445|Ga0070708_100998882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales785Open in IMG/M
3300005445|Ga0070708_101439430All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium642Open in IMG/M
3300005445|Ga0070708_101928227All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005467|Ga0070706_100003469All Organisms → cellular organisms → Bacteria → Proteobacteria15517Open in IMG/M
3300005468|Ga0070707_100421332All Organisms → cellular organisms → Bacteria1295Open in IMG/M
3300005471|Ga0070698_100102459All Organisms → cellular organisms → Bacteria → Proteobacteria2833Open in IMG/M
3300005471|Ga0070698_101282105All Organisms → cellular organisms → Bacteria → Proteobacteria683Open in IMG/M
3300005518|Ga0070699_100378802All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300005518|Ga0070699_101507128All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium617Open in IMG/M
3300005529|Ga0070741_10158165All Organisms → cellular organisms → Bacteria → Proteobacteria2264Open in IMG/M
3300005529|Ga0070741_10206622All Organisms → cellular organisms → Bacteria1906Open in IMG/M
3300005536|Ga0070697_100999601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi743Open in IMG/M
3300005555|Ga0066692_10271827Not Available1072Open in IMG/M
3300005556|Ga0066707_10997591All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005586|Ga0066691_10115368All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1520Open in IMG/M
3300005713|Ga0066905_101747534All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005713|Ga0066905_101856760All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium557Open in IMG/M
3300005764|Ga0066903_101324987All Organisms → cellular organisms → Bacteria1347Open in IMG/M
3300005764|Ga0066903_102931016Not Available925Open in IMG/M
3300005829|Ga0074479_10013342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium726Open in IMG/M
3300005876|Ga0075300_1029072All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300006796|Ga0066665_10041157All Organisms → cellular organisms → Bacteria3119Open in IMG/M
3300006797|Ga0066659_10137350All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1720Open in IMG/M
3300006844|Ga0075428_100611580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1163Open in IMG/M
3300006844|Ga0075428_100712079All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300006845|Ga0075421_101370237All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300006845|Ga0075421_102120124All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300006846|Ga0075430_100345556Not Available1229Open in IMG/M
3300006853|Ga0075420_100032469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00694663Open in IMG/M
3300006853|Ga0075420_101123184All Organisms → cellular organisms → Bacteria → Proteobacteria676Open in IMG/M
3300006854|Ga0075425_101454671All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium774Open in IMG/M
3300006854|Ga0075425_101596609All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300006969|Ga0075419_10839933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium659Open in IMG/M
3300007265|Ga0099794_10329847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium792Open in IMG/M
3300009012|Ga0066710_100577280All Organisms → cellular organisms → Bacteria1703Open in IMG/M
3300009038|Ga0099829_10168515All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1758Open in IMG/M
3300009089|Ga0099828_10331872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1369Open in IMG/M
3300009090|Ga0099827_11022578All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium717Open in IMG/M
3300009090|Ga0099827_11246914All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium647Open in IMG/M
3300009090|Ga0099827_11610872All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300009100|Ga0075418_11862998All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium654Open in IMG/M
3300009137|Ga0066709_100599303All Organisms → cellular organisms → Bacteria1569Open in IMG/M
3300009143|Ga0099792_10475995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium778Open in IMG/M
3300009147|Ga0114129_10548088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1504Open in IMG/M
3300009156|Ga0111538_13871536All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009162|Ga0075423_10052226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4212Open in IMG/M
3300009162|Ga0075423_10142108All Organisms → cellular organisms → Bacteria → Proteobacteria2520Open in IMG/M
3300009789|Ga0126307_11457716Not Available555Open in IMG/M
3300010043|Ga0126380_10329626All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1101Open in IMG/M
3300010048|Ga0126373_10322390All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300010320|Ga0134109_10096659All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300010325|Ga0134064_10435895All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium531Open in IMG/M
3300010326|Ga0134065_10041928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1382Open in IMG/M
3300010359|Ga0126376_12936639Not Available526Open in IMG/M
3300010360|Ga0126372_11932680Not Available635Open in IMG/M
3300010360|Ga0126372_12098292Not Available613Open in IMG/M
3300010362|Ga0126377_10036114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00694219Open in IMG/M
3300010391|Ga0136847_12195263All Organisms → cellular organisms → Bacteria3578Open in IMG/M
3300010398|Ga0126383_10059591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3228Open in IMG/M
3300010400|Ga0134122_12726368Not Available546Open in IMG/M
3300011269|Ga0137392_10116658All Organisms → cellular organisms → Bacteria2123Open in IMG/M
3300011270|Ga0137391_10198050Not Available1747Open in IMG/M
3300011270|Ga0137391_10761263All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300011271|Ga0137393_10168314Not Available1839Open in IMG/M
3300012189|Ga0137388_10227158All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300012189|Ga0137388_11223800Not Available689Open in IMG/M
3300012202|Ga0137363_10833443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium782Open in IMG/M
3300012204|Ga0137374_10013646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales9437Open in IMG/M
3300012208|Ga0137376_10002373All Organisms → cellular organisms → Bacteria11206Open in IMG/M
3300012285|Ga0137370_10184071All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300012358|Ga0137368_10015345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00697510Open in IMG/M
3300012363|Ga0137390_10080336All Organisms → cellular organisms → Bacteria3204Open in IMG/M
3300012532|Ga0137373_10561014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales865Open in IMG/M
3300012917|Ga0137395_10017931All Organisms → cellular organisms → Bacteria → Proteobacteria4053Open in IMG/M
3300012929|Ga0137404_10006639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00697855Open in IMG/M
3300012930|Ga0137407_10006416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00698057Open in IMG/M
3300012930|Ga0137407_11547336All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300012975|Ga0134110_10198508All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300014873|Ga0180066_1110697All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300017654|Ga0134069_1013587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2385Open in IMG/M
3300017997|Ga0184610_1040683All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300017997|Ga0184610_1290374Not Available539Open in IMG/M
3300018028|Ga0184608_10131043Not Available1070Open in IMG/M
3300018028|Ga0184608_10132059All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300018056|Ga0184623_10034549All Organisms → cellular organisms → Bacteria2286Open in IMG/M
3300018064|Ga0187773_10714244All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300018075|Ga0184632_10101303All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300018076|Ga0184609_10117581All Organisms → cellular organisms → Bacteria1206Open in IMG/M
3300018078|Ga0184612_10506419All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300018084|Ga0184629_10164903Not Available1131Open in IMG/M
3300018429|Ga0190272_10819936All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium860Open in IMG/M
3300018431|Ga0066655_10003225All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6341Open in IMG/M
3300018431|Ga0066655_10017830All Organisms → cellular organisms → Bacteria → Proteobacteria3250Open in IMG/M
3300018433|Ga0066667_10024250All Organisms → cellular organisms → Bacteria → Proteobacteria3293Open in IMG/M
3300018433|Ga0066667_10068016All Organisms → cellular organisms → Bacteria → Proteobacteria2238Open in IMG/M
3300018433|Ga0066667_10187511All Organisms → cellular organisms → Bacteria1505Open in IMG/M
3300018482|Ga0066669_10000805All Organisms → cellular organisms → Bacteria → Proteobacteria10888Open in IMG/M
3300019458|Ga0187892_10024605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00695368Open in IMG/M
3300020004|Ga0193755_1007089All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3636Open in IMG/M
3300021081|Ga0210379_10025513All Organisms → cellular organisms → Bacteria2263Open in IMG/M
3300021407|Ga0210383_11303677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium607Open in IMG/M
3300021418|Ga0193695_1089071All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium666Open in IMG/M
3300022534|Ga0224452_1066638All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300025327|Ga0209751_10024826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00695285Open in IMG/M
3300025885|Ga0207653_10349731Not Available577Open in IMG/M
3300025910|Ga0207684_10002684All Organisms → cellular organisms → Bacteria17768Open in IMG/M
3300025910|Ga0207684_10056019All Organisms → cellular organisms → Bacteria → Proteobacteria3344Open in IMG/M
3300025922|Ga0207646_11919554All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium504Open in IMG/M
3300025942|Ga0207689_10034072All Organisms → cellular organisms → Bacteria4229Open in IMG/M
3300026304|Ga0209240_1010348All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3535Open in IMG/M
3300026306|Ga0209468_1103777All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300026308|Ga0209265_1080226All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300026313|Ga0209761_1001428All Organisms → cellular organisms → Bacteria → Proteobacteria15456Open in IMG/M
3300026313|Ga0209761_1022611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3904Open in IMG/M
3300026318|Ga0209471_1041542All Organisms → cellular organisms → Bacteria2180Open in IMG/M
3300026320|Ga0209131_1109486Not Available1446Open in IMG/M
3300026323|Ga0209472_1032073All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2390Open in IMG/M
3300026333|Ga0209158_1064002All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1465Open in IMG/M
3300026377|Ga0257171_1059616All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300026523|Ga0209808_1207889All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300026528|Ga0209378_1319373All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium500Open in IMG/M
3300026540|Ga0209376_1003902All Organisms → cellular organisms → Bacteria → Proteobacteria13219Open in IMG/M
3300026548|Ga0209161_10001342All Organisms → cellular organisms → Bacteria → Proteobacteria20308Open in IMG/M
3300026551|Ga0209648_10107758All Organisms → cellular organisms → Bacteria → Proteobacteria2271Open in IMG/M
3300027651|Ga0209217_1062219All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus1108Open in IMG/M
3300027682|Ga0209971_1021272All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300027846|Ga0209180_10229196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1070Open in IMG/M
3300027846|Ga0209180_10575790All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300027873|Ga0209814_10148300All Organisms → cellular organisms → Bacteria → Proteobacteria1006Open in IMG/M
3300027875|Ga0209283_10167435All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300027880|Ga0209481_10009426All Organisms → cellular organisms → Bacteria → Proteobacteria4177Open in IMG/M
3300027880|Ga0209481_10690894All Organisms → cellular organisms → Bacteria → Proteobacteria530Open in IMG/M
3300027882|Ga0209590_10679897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi659Open in IMG/M
3300027903|Ga0209488_10169279All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300027909|Ga0209382_10105562All Organisms → cellular organisms → Bacteria3296Open in IMG/M
3300027909|Ga0209382_10300099All Organisms → cellular organisms → Bacteria1812Open in IMG/M
(restricted) 3300027995|Ga0233418_10228597All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300028803|Ga0307281_10003092All Organisms → cellular organisms → Bacteria → Proteobacteria4601Open in IMG/M
3300030336|Ga0247826_10786797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium744Open in IMG/M
3300031538|Ga0310888_10416281All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300031548|Ga0307408_100407567All Organisms → cellular organisms → Bacteria → Proteobacteria1169Open in IMG/M
3300031548|Ga0307408_100489080All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1075Open in IMG/M
3300031852|Ga0307410_11109513All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium686Open in IMG/M
3300031901|Ga0307406_10329290Not Available1185Open in IMG/M
3300031949|Ga0214473_10056929All Organisms → cellular organisms → Bacteria → Proteobacteria4575Open in IMG/M
3300031949|Ga0214473_10239444All Organisms → cellular organisms → Bacteria2089Open in IMG/M
3300031965|Ga0326597_10723307All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300031995|Ga0307409_100178093All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1879Open in IMG/M
3300032005|Ga0307411_10217497All Organisms → cellular organisms → Bacteria1480Open in IMG/M
3300032075|Ga0310890_10524343All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300033417|Ga0214471_10290502All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300033811|Ga0364924_017165All Organisms → cellular organisms → Bacteria1401Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.43%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.43%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil10.29%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.57%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.14%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.43%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.71%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.71%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.14%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.14%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.57%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.57%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.57%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.57%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.57%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.57%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.57%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.57%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.57%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.57%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.57%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.57%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.57%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.57%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.57%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.57%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004062Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005876Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033811Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10585971123300000364SoilMTLPPLKHVGELAGYPLPETDLKQVASILEGMKEDIQKLRDLDLPDDVEPILSFHVDPWEA*
F24TB_1235494823300000550SoilMTLPPLKHVGELAGYPLPETDLKQVASILEGMMEDIQRLRDLDLPDDIEPILSFHVDPWEA*
JGI25385J37094_1000061743300002558Grasslands SoilMERERLAAVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFRVEPWV
JGI25385J37094_1009687513300002558Grasslands SoilMETPPLAPVADLAGYPLSAADLAAVASILEGIMEDIEKLRALDLPDDLEPILTFRVEPWV
JGI25383J37093_1012210333300002560Grasslands SoilMETPPLAPVADLAGYPLSAADLAAVASILEGIMEDIEKLRALDLPDDLEPILTFRVEPWATPSRTITG*
JGI25384J37096_1000765953300002561Grasslands SoilMETPPLAPVADLAGYPLSAADLAAVASILEGIMEDIEKLRALDLPDDLEPILTFRVEPW
JGI25386J43895_1000159353300002912Grasslands SoilMERERLAVVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0055500_1004748923300004062Natural And Restored WetlandsMTLPPLGPVAQLAGYPLPEADLREVAAVLAGVLDDIQQLRDLDLPDGIEPLLTFRVE
Ga0063356_100005291133300004463Arabidopsis Thaliana RhizosphereMAGERSRLRGADLADVAALAGHALSAGELEEVAGLLRGMMDDIQVLRDLDLPEDVEPILTFRVEPWP*
Ga0063356_10476965823300004463Arabidopsis Thaliana RhizosphereNNQGVVLMTLPPLKHVAELAGQPLPEADLEQVVSILEGMMEDIQKLRDLDLPDDVEPILTFQVDPWEA*
Ga0062595_10121641923300004479SoilMTLPPLKHVAELAGYPLPEADLKQVASILEGMKEDIQKLRDLDLPDDVEPILTFQVDPWEA*
Ga0062595_10167224623300004479SoilMALPPLQPIAALAGYPLPAADLEQVALVLDGVMEDIQKLRDLDLPDDVEPILDFRVEPWS
Ga0062592_10121193923300004480SoilMTLPPLKHVAELAGYPLPEVDLEQVAAILDGMMEDIQKLRDLDLPDDVEPILGFHVDPWEA*
Ga0062594_10048249623300005093SoilMSASELAAVADLAGYPLSPTELDEVGAILAGMTEDIRALRDLDIADDVEPILTFRVEPWS
Ga0066674_1000153863300005166SoilMSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASILEGIMEDVRKLRALDLPDDLEPILTFRVEPWA*
Ga0066674_1005904523300005166SoilMTSSPMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIMEDIQTLRDLDLPDDLEPILTFRVEPWG*
Ga0066672_1054073423300005167SoilMRLPSLAPVADLAGYPLSVADLAEVASILESIMEDIEALRALDLADDLEPILSFRVEPWV
Ga0066679_1038396713300005176SoilMTSSPMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIMEDIQTLRDLDLPDDLEPILAFRVEPWG*
Ga0066678_1086499023300005181SoilMKLPPLAPVADLAGYPLSAADLAAVASILEGILEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0066388_10003659943300005332Tropical Forest SoilMTSAPLEPVANLAGYLLPEADLAKIAALLEGVREDIQKLRELDLHDDVEPILTFRVEPWT
Ga0066388_10266095723300005332Tropical Forest SoilMTLPPLGPVVELAGYPLPEADLVEVASILDGMMEDIQKLRDLDLPDEVEPVLTFRVEPWD
Ga0068869_10001802823300005334Miscanthus RhizosphereMTLPPRKHVAELAGYPLPEVDLEQVAAILDGMMEDIQKLRDLDLPDDVEPILGFHVDPWEA*
Ga0070691_1013195123300005341Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEADLTQVASILEGMMEDIQRLRDLDVPDDVEPILSFHVDPWEA*
Ga0070708_10099888223300005445Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEADLKQVASILEGMKEDIQKLRDLDLPDDVEPILSFHVDPWEA*
Ga0070708_10143943023300005445Corn, Switchgrass And Miscanthus RhizosphereMTLPPPKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0070708_10192822723300005445Corn, Switchgrass And Miscanthus RhizosphereMTASELAAVADLAGYPLSTADLEEVAAILTGMMDDIQRLRDLDLPDDVEPIVTFRVEPWA
Ga0070706_10000346933300005467Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQRLRDLDLPDDVEPILSFHVDPWEA*
Ga0070707_10042133223300005468Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDIEPILSFHVDPWEA*
Ga0070698_10010245933300005471Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEADLKQVAAILEGMMEDIQKLRDLDLPDDIEPILSFHVDPWEA*
Ga0070698_10128210523300005471Corn, Switchgrass And Miscanthus RhizosphereMTASELAAVAALAGYPLSTAALEEVASILTGMMEDIQRLRDLELPDDVEPIVTFRVEPWA
Ga0070699_10037880223300005518Corn, Switchgrass And Miscanthus RhizosphereMSLPPLEPIADLAGHPLPAADLEQVALILDGMMEDIQKLRDLELPDDVEPILAFRVEPWL
Ga0070699_10150712823300005518Corn, Switchgrass And Miscanthus RhizosphereMTLPPPKHVAELDGYPLPEADLKQVASILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0070741_1015816533300005529Surface SoilMQADDLAAVAELAGYPLSARELEEVAAILAPMLDDLEALRAMDLPDEVEPILT
Ga0070741_1020662223300005529Surface SoilVTVPPLGPIAELAGYPLPEADLVEVAAVLRSILPDIQALRDLDLPDDVEPILTFRVEPWD
Ga0070697_10099960123300005536Corn, Switchgrass And Miscanthus RhizosphereMALPPLKPVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILSFHVDPWEA*
Ga0066692_1027182723300005555SoilMERERLAAVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFRV
Ga0066707_1099759113300005556SoilMSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASILEGIMEDVRKLRALDLPDDLEPILTFRVDPWA*
Ga0066691_1011536823300005586SoilGAPMRLPSLAPVADLAGYPLSVADLAEVASILESIMEDIEALRALDLADDLEPILSFRVEPWV*
Ga0066905_10174753423300005713Tropical Forest SoilLAAVADLAGYPLSASDLEQVAAILSSMMEDIQTLRDLELPDDVEPILAFRVEAWR*
Ga0066905_10185676023300005713Tropical Forest SoilMTASELAAVAVLAGHPLSTTDLEEVAAILTGMMEDIQLLRDLELPDDVEPIVTFRVEPWA
Ga0066903_10132498723300005764Tropical Forest SoilMTASELAAVADLAGYSLSTADLEEVAAILTGMMEDIQRLRDLDLPDEVEPIVTFRVEPWA
Ga0066903_10293101613300005764Tropical Forest SoilMSLPPLEPIADLAGHPLSAADLEQVALILDGMMEDIQKLRDLELPDDVEPILAFRVEP
Ga0074479_1001334223300005829Sediment (Intertidal)MTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILSFHVDPWEA*
Ga0075300_102907223300005876Rice Paddy SoilMTLPPLEPTAQLAGYPLPAADLAQVASVLDGIMDDIQQLRDLDLPDDVEPILEFRVEPWT
Ga0066665_1004115733300006796SoilVSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASILEGIMEDVRKLRALDLPDDLEPILTFRVEPWA*
Ga0066659_1013735013300006797SoilMTSSPMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIIEDIQMLRDLDLPDDLEPILTFRVEPWG*
Ga0075428_10061158023300006844Populus RhizosphereMRAHELAAVANLAGHPLSAADLEEVAAILTGMMEDIQALRDLDLPDDVEPILTFRVEPWP
Ga0075428_10071207913300006844Populus RhizosphereMRASELAAVADLAGYPLSPADLEEVAAILTGMMADIQALRDLDLPDDVEPVLTFRVEAWR
Ga0075421_10137023713300006845Populus RhizosphereVLMTLPPLKHVAELAGHPLPEADLEQVASILEGMMEDIQKLRDLDLPDDVEPILTFHVDPWKA*
Ga0075421_10212012413300006845Populus RhizosphereMTLPPLKHVGELAGYPLPETDLKQVASILEGMMEDIQRLRDLDLPDDIEPILSFHVD
Ga0075430_10034555613300006846Populus RhizosphereMERRALAAVAELAGYPLSAADLEAVAGILSSMQLDIETLRGLDVPDHVEPILT
Ga0075420_10003246953300006853Populus RhizosphereMEGRALAAVAELAGYPLSAADLEAIAGILASMQQDIETLRGLDVPDDVEPILTFRVEPWT
Ga0075420_10112318413300006853Populus RhizosphereMTLPPLKHVAELAGYPLPEADLNQVASILEGMMEDIQKLRDLDLPDDVEPILTFHVDPWKA*
Ga0075425_10145467113300006854Populus RhizosphereMSLPPLEPIANLAGHPLPAADLEQVAMILDGMMEDIQKLRDLELPDDVEPILAFRVEPWL
Ga0075425_10159660923300006854Populus RhizosphereMRGEELAPVTDFAGHSLSAAELDEVAAILTAMMQDLQELRDLDLPDDVEPIVTFRVEPW*
Ga0075419_1083993323300006969Populus RhizosphereMRAHELAAVADLAGHPLSAADLEEVAAILTGMMEDIQALRDLDLPD
Ga0099794_1032984723300007265Vadose Zone SoilMALPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQRLRDLDLPDDVEPILSFHVDPWEA*
Ga0066710_10057728023300009012Grasslands SoilMRLPSLAPVADLAGYPLSVAGLAEVASILESIMEDIEALRALDLADDLEPILSFRVEPWV
Ga0099829_1016851523300009038Vadose Zone SoilAPVADLAGYPLSAADLAQVASILEGIMEDIEKLRALDLPDDLEPILTFRVEPWV*
Ga0099828_1033187213300009089Vadose Zone SoilMTLPPLKHVADLAGYPLSEADLKQVASILEGMMEDIQKLRDLDLPDDIEPILSFHVDPWEA*
Ga0099827_1102257823300009090Vadose Zone SoilVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFRVEPWV*
Ga0099827_1124691423300009090Vadose Zone SoilMTVPPLKHVAELAGYPLPEADLKQGASILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0099827_1161087223300009090Vadose Zone SoilMERERLAAVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFGVEPWV
Ga0075418_1186299813300009100Populus RhizosphereADLAGYPLSPADLEEVAAILTGMMADIQALRDLDLPDDVEPVLTFRVEAWR*
Ga0066709_10059930323300009137Grasslands SoilMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIIEDIQTLRDLDLPDDLEPILTFRVEPWG
Ga0099792_1047599523300009143Vadose Zone SoilMTLPPLKHVAELAGYPLPEADLKQVASTLEGMMEDIQRLRDLDLPDDVEPILSFHVDPWEA*
Ga0114129_1054808833300009147Populus RhizosphereMEGRALAAVAELAGYPLSPADLEAIAGILTSMQQDIETLRGLDVPDDVEPILTFRVEPWT
Ga0111538_1387153623300009156Populus RhizosphereLAGYPLSAADLEEVAAILTGMMADIQMLRDLDLPDDVEPILTFRVEPWR*
Ga0075423_1005222643300009162Populus RhizosphereMSLPPLEPIADLAGHPLPAADLEQVAMILDGMMEDVQKLRDLELPDDVEPILAFRVEPWL
Ga0075423_1014210813300009162Populus RhizosphereRDARHEADSRVVLMRGEELAPVTDFAGHSLSAAELDEVAAILTAMMQDLQELRDLDLPDDVEPIVTFRVEPW*
Ga0126307_1145771613300009789Serpentine SoilMRLPLLNSVAELAGCPLRDDELAEIAGLLDGIMDDVQKLRELDLADDVEPVLTFRVEPWT
Ga0126380_1032962613300010043Tropical Forest SoilYLRTPVSGPMKLTIADLAGHPLSAADLEQVALILDGMMEDIQKLRDLELPDDVEPILAFRVEPWV*
Ga0126373_1032239023300010048Tropical Forest SoilMSLPPLEPIADLAGHPLPAADLEQVAMILDGMMEDIQKLRDLELPDDVEPILAFRVEPWL
Ga0134109_1009665923300010320Grasslands SoilMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIMEDIQTLRDLDLPDDLEPILTFRVEPWG
Ga0134064_1043589513300010325Grasslands SoilMETPPLAPVADLAGYPLSAADLAAVASNLEGIVEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0134065_1004192813300010326Grasslands SoilMERERLAAVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILT
Ga0126376_1293663913300010359Tropical Forest SoilMSERTMRMTLPPLGPVVELAGYPLPEADLVEVASILDGMMEDIQKLRDLDLPDEVEPVLTFRVEPWD*
Ga0126372_1193268013300010360Tropical Forest SoilMRPSDLAPIADLAGYPLSATDLEAVASILTGIMEDIQTLRELDLPDVEPILTFRVEPWR*
Ga0126372_1209829223300010360Tropical Forest SoilMSLPPLEPIADLAGYPLPAADLEQVAMILDGMMEDIQKLRDLDLPDDVEPILEFRVESWS
Ga0126377_1003611413300010362Tropical Forest SoilMSLPPLEPIADLAGHPLSAADLEQVALILDGMMEDIQKLRDLELPDDVEPILAFRVEPWL
Ga0136847_1219526323300010391Freshwater SedimentMTLPPLKHVAELAGYPLPEADLKQVALILEGMMEDIQKLRDLDLPDDVEPILTFHVDPWEA*
Ga0126383_1005959143300010398Tropical Forest SoilMSLPPLEPIADLAGHPLSAADLEQVALILDGMMEDIQKLRDLELPDDVE
Ga0134122_1272636823300010400Terrestrial SoilAELEAVAAILASMMEDIQALRDATLPDDVEPVLGFRLEPWR*
Ga0137392_1011665833300011269Vadose Zone SoilMTLPPPKHVAELAGYLLPEADLKQVASILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0137391_1019805033300011270Vadose Zone SoilMTLPPPKHVAELAGYPLPEADLKQVASILEGMIEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0137391_1076126323300011270Vadose Zone SoilMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDVPDDIEPILSFHVDPWEA*
Ga0137393_1016831423300011271Vadose Zone SoilMERERLAPVADLAGYPLSAADLAQVASILAGITEDIEELRALDLPDDLEPILTFRVEPWV
Ga0137388_1022715823300012189Vadose Zone SoilMERERLAPVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0137388_1122380013300012189Vadose Zone SoilLPPLKSVAALAGYPLPEADLAEIAALLDGITEEIQKLRELDLHDDIEPNLTFRVEPWM*
Ga0137363_1083344313300012202Vadose Zone SoilMTLPPLKHVAELAGYPLPEADLKQVAAILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0137374_1001364683300012204Vadose Zone SoilMAPKLPILKPVAELAGYPLPEEDLKEVASVLAGVMEDIQKLRDLDLPDDVEPVTVFRVEPWDEEI*
Ga0137376_1000237313300012208Vadose Zone SoilGAGTERGEREGAPTRLPSLAPVADLAGYPLSVADLAEVASILESIMEDIEALRALDLADDLEPILSFRVEPWV*
Ga0137370_1018407133300012285Vadose Zone SoilMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIMEDIQTLRDLDLPDDLEPILTFRV
Ga0137368_1001534513300012358Vadose Zone SoilMAPKLPILKPVAELAGYPLPEEDLKEVASVLAGVMEDIQKLRDLDLPDDVEPVTV
Ga0137390_1008033633300012363Vadose Zone SoilMTLPPLKHVAELAGYPLPEADLKQVASILEGMIEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0137373_1056101423300012532Vadose Zone SoilMTLPPLEPVADLAGHPLPEAALAEIAALLDGVMEDIQKLRELDLHDDVEPILTFHIEPWT
Ga0137395_1001793123300012917Vadose Zone SoilMTLPPPKQVAELAGYLLPEADLKQVASILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWEA*
Ga0137404_1000663923300012929Vadose Zone SoilMALPPLKHVAELAGYPLPEADLKQVASILEGMMEDVQKLRDLDLPDDVEPILSFHVDPWEA*
Ga0137407_1000641653300012930Vadose Zone SoilMALPPLKHVAELAGYPLPEADLKQVASILEGMMEDVQKLRDLDLPDDVEPILSFHVDTWEA*
Ga0137407_1154733623300012930Vadose Zone SoilMERERLAAVADLAGYPLSAADLAQVASILAGITKDIEKLRALDLPDDLEPILTFRVEPWV
Ga0134110_1019850833300012975Grasslands SoilMRLPSLAPVADLAGYPLSVADLAGVASILESIMEDIETLRALDLADDLEPILSFRVEPWV
Ga0180066_111069723300014873SoilMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILTFHVDPWEA*
Ga0134069_101358733300017654Grasslands SoilMKLPPLAPVADLAGYPLSAADLAAVASILEGIVEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0184610_104068323300017997Groundwater SedimentMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILTFQVDPWE
Ga0184610_129037413300017997Groundwater SedimentNQGVVLMALPPIKPVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILSFHVDPWEA
Ga0184608_1013104323300018028Groundwater SedimentMALPPLKPVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILSFHVDPWE
Ga0184608_1013205923300018028Groundwater SedimentMALPPLKHVAELAGYPLPETDLKQVASILEGMMEDVQKLRDLDLPDDVEPILSFHVDPWE
Ga0184623_1003454923300018056Groundwater SedimentMILPPLKHVADLAGYPLPEADLKQVAAILEGMMADIQKLRDLDLPDDIEPILSFHVDPWE
Ga0187773_1071424423300018064Tropical PeatlandMRLPSLAPVADLAGYPLSAADLEQVASILDGIMEDIRQLRELDLPDDVEPILTFRVEPWL
Ga0184632_1010130323300018075Groundwater SedimentMTLPPLKHVADLAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDIEPILSFHVDPWE
Ga0184609_1011758123300018076Groundwater SedimentMALPPLKPVAELAGYPLPEADLKQVAAILEGMMADIQKLRDLDLPDDIEPILSFHVDPWE
Ga0184612_1050641923300018078Groundwater SedimentMTLPPLKHVADLAGYPLPEADLKQVAAILEGMMADIQKLRDLDLPDDVEPILTFQVDPWE
Ga0184629_1016490313300018084Groundwater SedimentMPLPPLKHVAELAGYPLPEADLRQVASILEGMMEDIQKLRDLDLLDDVEPILSFHVDPWE
Ga0190272_1081993623300018429SoilMTLPPLRHVAELAGYPLPEADLEQVASILDGMMEDIQKLRDLDLPDDVEPILGFHVDPWE
Ga0066655_1000322523300018431Grasslands SoilMETPPLAPVADLAGYPLSAADLAAVASILEGIVEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0066655_1001783043300018431Grasslands SoilSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASILEGIMEDVRKLRALDLPDDLEPILTFRVEPWA
Ga0066667_1002425033300018433Grasslands SoilMTSSPMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIIEDIQTLRDLDLPDDLEPILTFRVEPWG
Ga0066667_1006801623300018433Grasslands SoilMSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASILEGIMEDVRKLRALDLPDDLEPILTFRVEPWA
Ga0066667_1018751123300018433Grasslands SoilMRLPSLAPVADLAGYPLSVADLAGVASILESIMEDIEALRALDLADDLEPILSFRVEPWV
Ga0066669_1000080533300018482Grasslands SoilMTSSPMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIMEDIQTLRDLDLPDDLEPILTFRVEPWG
Ga0187892_1002460523300019458Bio-OozeMTLPPLKHVADLAGYPLPEADLKQVAAILEGMMADIQKLRDLDLPDDIEPILSFHVDLWK
Ga0193755_100708933300020004SoilMALPPLKPVAELAGYPLPEADLEQVASILEGMMEDIQKLRDLDLPDDVEPILRLHVDPWE
Ga0210379_1002551323300021081Groundwater SedimentMTLPPLKHVAELAGYPLPEADLRQVASILEGMMEDIQKLRDLDLPDDVEPILSFHVDPWE
Ga0210383_1130367723300021407SoilMTLPPLRPVAELAGYPLLDDELAAAASLLSGVMEDIKRLRDLDLPD
Ga0193695_108907123300021418SoilAELAGYPLPETDLKQVASILEGMMEDVQKLRDLDLPDDVEPILSFHVDPWEA
Ga0224452_106663823300022534Groundwater SedimentMALPPLKPVAELAGYPLPEADLEQVASILEGMMEDLQKLRDLDLPDDVEPILSFHVDPWE
Ga0209751_1002482623300025327SoilMTLPPLKHVAELAGYPLPEADLKQVVSILEGMMEDIQKLRDLDLPDDVEPILTFQVDPWE
Ga0207653_1034973123300025885Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEVDLEQVAAILDGMMEDIQKLRDLDLPDDVEPILGFHVDPWE
Ga0207684_10002684153300025910Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQRLRDLDLPDDVEPILSFHVDPWE
Ga0207684_1005601933300025910Corn, Switchgrass And Miscanthus RhizosphereMTLPPPKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWE
Ga0207646_1191955413300025922Corn, Switchgrass And Miscanthus RhizosphereMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPYDVEPILSFHVDPWE
Ga0207689_1003407273300025942Miscanthus RhizosphereMTLPPRKHVAELAGYPLPEVDLEQVAAILDGMMEDIQKLRDLDLPDDVEPILGFHVDPWE
Ga0209240_101034813300026304Grasslands SoilKSVAALAGYPLPEADLAEIAALLDGITEEIQKLRELDLHDDIEPNLTFRVEPWM
Ga0209468_110377713300026306SoilRLAAVADLAGYPLSAADLAQVASIFAGITEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0209265_108022613300026308SoilMSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASLLEGIMEDVRKLRALDLPDDLEPILTFRVEPWA
Ga0209761_100142883300026313Grasslands SoilMERERLAAVADLAGYPLSAADLARVASILAGITEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0209761_102261143300026313Grasslands SoilMETPPLAPVADLAGYPLSAADLAAVASILEGIMEDIEKLRALDLPDDLEPILTFRVEPWATPSRTITG
Ga0209471_104154233300026318SoilMTSSPMRLPPLTPVADLAGYPLSVGDLAQVSLILEGIMEDIQTLRDLDLPDDLEPILAFRVEPWG
Ga0209131_110948613300026320Grasslands SoilQGVVLMALPPLKHVAELAGYPLPETDLKQVASILEGMMEDVQKLRDLNLPDDVEPILSFHVDPWEA
Ga0209472_103207333300026323SoilMRLPSLAPVADLAGYPLFVADLAGVASILESIMEDIEALRALDLADDLEPILSFRVEPWV
Ga0209158_106400223300026333SoilMEREQLAAVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0257171_105961623300026377SoilMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDIEPILSFHVDPWE
Ga0209808_120788913300026523SoilMSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASILEGIMEDVRKLRALDLPDDLEPILTFRVEPWV
Ga0209378_131937323300026528SoilMSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASILEGIMEDVRKLRALDLPDDLEPILTFRVDPWA
Ga0209376_100390243300026540SoilMSEPRTRDGDREGLAAVAHLAGYPLSAADLAQVASLLEGIMEDVRKLRALDLPDDLEPILTFRVDPWA
Ga0209161_1000134243300026548SoilMKLPPLAPVADLAGYPLSAADLAAVASILEGIMEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0209648_1010775833300026551Grasslands SoilMSLPPLGPVAELAGHTLTAAELEEVASLLAGMMADIQSLRDLDLPDDVEPILTFRVEPWA
Ga0209217_106221923300027651Forest SoilMTLPPLKHVAELAGYPLPAADLKQVASILVGMMEDIQKLRDLDLPDDIEPILNFHVDPWE
Ga0209971_102127223300027682Arabidopsis Thaliana RhizosphereMAGERSRLRGADLADVAALAGHALSAGELEEVAGLLRGMMDDIQVLRDLDLPEDVEPILTFRVEPWP
Ga0209180_1022919623300027846Vadose Zone SoilMMLPPLKSVAALAGYPLPEADLAEIAALLDGITEEIQKLRELDLHDDIEPNLTFRVEPWM
Ga0209180_1057579023300027846Vadose Zone SoilPKHVAELAGYLLPEADLKQVASILEGMMEDIQKLRDLDLPDDIEPILSFHVDPWEA
Ga0209814_1014830023300027873Populus RhizosphereMEGRALAAVAELAGYPLSAADLEAIAGILTSMQQDIETLRGLDVPDDVEPILTFRVEPWT
Ga0209283_1016743523300027875Vadose Zone SoilMERERLAPVADLAGYPLSAADLAQVASILEGIMEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0209481_1000942633300027880Populus RhizosphereMRGSELAAVADLAGYPLSAADLEEVAAILTGMMADIQMLRDLDLPDDVEPILTFRVEPWR
Ga0209481_1069089423300027880Populus RhizosphereMDGRALAAVAELAGYPLSPADLEAIAGVLTSMQQDIETLRGLDVPDDVEPILTFRVEPWT
Ga0209590_1067989723300027882Vadose Zone SoilVADLAGYPLSAADLAQVASILAGITEDIEKLRALDLPDDLEPILTFRVEPWV
Ga0209488_1016927933300027903Vadose Zone SoilMTLPPPKHVAELAGYPLPEADLKQVASILEGMIEDIQKLRDLDLPYDVEPILSFHVDPWE
Ga0209382_1010556233300027909Populus RhizosphereMRAHELAAVADLAGHPLSAADLEEVAAILTGMMEDIQALRDLDLPDDVEPILTFRVEPWP
Ga0209382_1030009923300027909Populus RhizosphereMTLPPLKHVAELAGHPLPEADLEQVASILEGMMEDIQKLRDLDLPDDVEPILTFHVDPWK
(restricted) Ga0233418_1022859713300027995SedimentMTIPPLGPVADLAGYTLPAADLAEVASILAAIEEDIQQLRDLDLPDDVEPILSFRVEPWEQER
Ga0307281_1000309233300028803SoilMTLPPLKHVAELAGYPLPEADLRQVASILEGMMEDIQKLRDLDLLDDVEPILSFHVDPWE
Ga0247826_1078679723300030336SoilMMLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKFRDLDLPDDVEPILT
Ga0310888_1041628123300031538SoilMTLPPLKHVAELAGYPLPEADLTQVASILEGMMEDIQRLRDLDVPDDVEPILSFHVDPWE
Ga0307408_10040756723300031548RhizosphereMTSEELAAVADLAGYPLPAADLEEVAAILSGMMQDIRALRDLDLPDDVEPILTFRVEPWP
Ga0307408_10048908013300031548RhizosphereAVADLAGYSLPAADLEEVAAILSGMMQDLQALRDLDLPDDVEPILTFRVEPWR
Ga0307410_1110951323300031852RhizosphereMVLMTSEELAAVADLAGYPLPAADIEEVAAILSGMMQDIRALRDLDLPDDVEPILTFRVEPWP
Ga0307406_1032929023300031901RhizosphereMTSEELAAVADLAGYSLPAADLEEVAAILSGMMQDLQALRDLDLPDDVEPILTFRVEPWR
Ga0214473_1005692933300031949SoilMTLPPLKHVAELAGYPLPEADLEQVASILEGMMEDIQKLRDLDLPDDVEPILTFQVDPWE
Ga0214473_1023944423300031949SoilMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDNVEPILTFHVDPWE
Ga0326597_1072330723300031965SoilMTLPPLEHVAELAGYPLPEADLKQVASILEGMMEDIRKLRDLDLPDDVEPILTFHVDPWE
Ga0307409_10017809333300031995RhizosphereMTSEDLAAVADLAGYPLPAADLEEVAAILSGMMQDIRALRDLDLPDDVEPILTFRVEPWP
Ga0307411_1021749723300032005RhizosphereMTSEELAAVADLAGYPLPAADLEEVAAILSGMMQDIRALRDLDLPDDVEPILTFRVEQWP
Ga0310890_1052434323300032075SoilMALPPLKHVAELAGYPLPETDLKQVASILEGMMEDIQKLRDLDLPDDVEPILSFHVDPWE
Ga0214471_1029050223300033417SoilMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILTFQVHPWE
Ga0364924_017165_619_8043300033811SedimentMTLPPLKHVAELAGYPLPEADLKQVASILEGMMEDIQKLRDLDLPDDVEPILTFHVDPWE


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