Metagenome / Metatranscriptome Family F033746

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033746
Family Type	Metagenome / Metatranscriptome
Number of Sequences	176
Average Sequence Length	49 residues
Representative Sequence	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPP
Number of Associated Samples	137
Number of Associated Scaffolds	176

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.41 %
% of genes near scaffold ends (potentially truncated)	96.59 %
% of genes from short scaffolds (< 2000 bps)	85.80 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.591 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.432 % of family members)
Environment Ontology (ENVO)	Unclassified (58.523 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.614 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.06% β-sheet: 0.00% Coil/Unstructured: 64.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 176 Family Scaffolds
PF03091	CutA1	94.32
PF00005	ABC_tran	2.84
PF01594	AI-2E_transport	1.70
PF07755	DUF1611	0.57
PF00563	EAL	0.57

COG ID	Name	Functional Category	% Frequency in 176 Family Scaffolds
COG1324	Divalent cation tolerance protein CutA	Inorganic ion transport and metabolism [P]	94.32
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.70
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.57
COG3367	Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family	General function prediction only [R]	0.57
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.57
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.57
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.57

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.59 %
Unclassified	root	N/A	3.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.59 %
Unclassified	root	N/A	3.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.59 %
Unclassified	root	N/A	3.41 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	78.98 %
Unclassified	root	N/A	3.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.57 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	78.98 %
Unclassified	root	N/A	3.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	15.91 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	3.98 %
Unclassified	root	N/A	3.41 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.57 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	15.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.98 %
Unclassified	root	N/A	3.41 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.57 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	15.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.98 %
Unclassified	root	N/A	3.41 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	11.36 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.98 %
Unclassified	root	N/A	3.41 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.57 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	11.36 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.98 %
Unclassified	root	N/A	3.41 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10092427	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300002560\|JGI25383J37093_10020942	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300002560\|JGI25383J37093_10043840	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300002561\|JGI25384J37096_10036294	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300002562\|JGI25382J37095_10022379	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300002562\|JGI25382J37095_10127912	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300002908\|JGI25382J43887_10194224	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300002912\|JGI25386J43895_10007032	All Organisms → cellular organisms → Bacteria	3133	Open in IMG/M
3300002912\|JGI25386J43895_10060286	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300002912\|JGI25386J43895_10178582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	533	Open in IMG/M
3300002914\|JGI25617J43924_10312260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300005167\|Ga0066672_10567244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	735	Open in IMG/M
3300005175\|Ga0066673_10009883	All Organisms → cellular organisms → Bacteria	4038	Open in IMG/M
3300005177\|Ga0066690_10709083	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	665	Open in IMG/M
3300005178\|Ga0066688_10425705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	860	Open in IMG/M
3300005179\|Ga0066684_10721698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	665	Open in IMG/M
3300005186\|Ga0066676_10058675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2217	Open in IMG/M
3300005450\|Ga0066682_10733867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	603	Open in IMG/M
3300005468\|Ga0070707_101273653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	701	Open in IMG/M
3300005518\|Ga0070699_102023258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	526	Open in IMG/M
3300005553\|Ga0066695_10167455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1372	Open in IMG/M
3300005553\|Ga0066695_10593389	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005556\|Ga0066707_10057480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2276	Open in IMG/M
3300005559\|Ga0066700_10247057	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1246	Open in IMG/M
3300005586\|Ga0066691_10195329	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1177	Open in IMG/M
3300006032\|Ga0066696_10004780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6205	Open in IMG/M
3300006034\|Ga0066656_10258927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1119	Open in IMG/M
3300006034\|Ga0066656_10942128	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006046\|Ga0066652_100180307	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1800	Open in IMG/M
3300006791\|Ga0066653_10260675	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300006794\|Ga0066658_10004947	All Organisms → cellular organisms → Bacteria	4726	Open in IMG/M
3300006796\|Ga0066665_11017498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	634	Open in IMG/M
3300006797\|Ga0066659_11132672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	654	Open in IMG/M
3300006847\|Ga0075431_101545912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	622	Open in IMG/M
3300006854\|Ga0075425_101762930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	696	Open in IMG/M
3300006954\|Ga0079219_11782819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	575	Open in IMG/M
3300009012\|Ga0066710_101030897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1271	Open in IMG/M
3300009012\|Ga0066710_102523886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	742	Open in IMG/M
3300009012\|Ga0066710_103395689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	605	Open in IMG/M
3300009012\|Ga0066710_104328967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300009012\|Ga0066710_104762156	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300009089\|Ga0099828_10532437	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300009090\|Ga0099827_11553912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	576	Open in IMG/M
3300009147\|Ga0114129_11676707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	776	Open in IMG/M
3300009162\|Ga0075423_12074755	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	616	Open in IMG/M
3300009806\|Ga0105081_1038074	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010304\|Ga0134088_10258327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	838	Open in IMG/M
3300010323\|Ga0134086_10203831	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010323\|Ga0134086_10324313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	603	Open in IMG/M
3300010323\|Ga0134086_10469033	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300010329\|Ga0134111_10127921	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300010335\|Ga0134063_10499205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	609	Open in IMG/M
3300010364\|Ga0134066_10183229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	682	Open in IMG/M
3300010401\|Ga0134121_10187289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1783	Open in IMG/M
3300010401\|Ga0134121_11568245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	676	Open in IMG/M
3300011269\|Ga0137392_10464453	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300011269\|Ga0137392_11341107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	574	Open in IMG/M
3300011270\|Ga0137391_10100952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2500	Open in IMG/M
3300011271\|Ga0137393_10540211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1000	Open in IMG/M
3300011405\|Ga0137340_1109409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	531	Open in IMG/M
3300012157\|Ga0137353_1096361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	551	Open in IMG/M
3300012198\|Ga0137364_10332595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1131	Open in IMG/M
3300012205\|Ga0137362_11031035	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	700	Open in IMG/M
3300012205\|Ga0137362_11315001	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	608	Open in IMG/M
3300012206\|Ga0137380_11772280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	501	Open in IMG/M
3300012208\|Ga0137376_11432607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	582	Open in IMG/M
3300012209\|Ga0137379_11081463	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300012285\|Ga0137370_10484939	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	756	Open in IMG/M
3300012285\|Ga0137370_10913180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300012349\|Ga0137387_10998771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	600	Open in IMG/M
3300012351\|Ga0137386_11168237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	540	Open in IMG/M
3300012354\|Ga0137366_10325581	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1127	Open in IMG/M
3300012355\|Ga0137369_10168682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1721	Open in IMG/M
3300012356\|Ga0137371_10741086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	750	Open in IMG/M
3300012359\|Ga0137385_11115728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	649	Open in IMG/M
3300012360\|Ga0137375_10809899	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012360\|Ga0137375_10967936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	671	Open in IMG/M
3300012362\|Ga0137361_10445588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1189	Open in IMG/M
3300012390\|Ga0134054_1215486	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300012397\|Ga0134056_1301645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300012401\|Ga0134055_1184028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300012532\|Ga0137373_10398088	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1070	Open in IMG/M
3300012683\|Ga0137398_10002693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7676	Open in IMG/M
3300012917\|Ga0137395_10531057	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	848	Open in IMG/M
3300012924\|Ga0137413_11281728	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	587	Open in IMG/M
3300012972\|Ga0134077_10086355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1200	Open in IMG/M
3300012977\|Ga0134087_10355609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	701	Open in IMG/M
3300012977\|Ga0134087_10773123	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300014150\|Ga0134081_10064877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1108	Open in IMG/M
3300014150\|Ga0134081_10215538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	658	Open in IMG/M
3300014154\|Ga0134075_10213099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	832	Open in IMG/M
3300014154\|Ga0134075_10355473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	643	Open in IMG/M
3300014154\|Ga0134075_10529615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300014157\|Ga0134078_10242973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	752	Open in IMG/M
3300014157\|Ga0134078_10306588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	685	Open in IMG/M
3300015052\|Ga0137411_1014548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1275	Open in IMG/M
3300015052\|Ga0137411_1098552	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	829	Open in IMG/M
3300015052\|Ga0137411_1241649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300015052\|Ga0137411_1270336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1172	Open in IMG/M
3300015054\|Ga0137420_1087916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1461	Open in IMG/M
3300015054\|Ga0137420_1118639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	781	Open in IMG/M
3300015264\|Ga0137403_11320227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	568	Open in IMG/M
3300015357\|Ga0134072_10392936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	544	Open in IMG/M
3300015358\|Ga0134089_10192050	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300015359\|Ga0134085_10224717	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300017656\|Ga0134112_10290175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	656	Open in IMG/M
3300017656\|Ga0134112_10362704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	592	Open in IMG/M
3300017659\|Ga0134083_10122884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1037	Open in IMG/M
3300017961\|Ga0187778_10030777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3282	Open in IMG/M
3300018031\|Ga0184634_10000962	All Organisms → cellular organisms → Bacteria	8147	Open in IMG/M
3300018059\|Ga0184615_10572373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	594	Open in IMG/M
3300018075\|Ga0184632_10470027	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018081\|Ga0184625_10451730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	658	Open in IMG/M
3300018084\|Ga0184629_10532491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
3300018431\|Ga0066655_10440404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	860	Open in IMG/M
3300018433\|Ga0066667_11387550	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	617	Open in IMG/M
3300018433\|Ga0066667_11959458	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300018468\|Ga0066662_10132140	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1848	Open in IMG/M
3300018468\|Ga0066662_12967959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300018482\|Ga0066669_10062176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2423	Open in IMG/M
3300021073\|Ga0210378_10273462	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300021344\|Ga0193719_10348497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	616	Open in IMG/M
3300022756\|Ga0222622_11397882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	515	Open in IMG/M
3300024246\|Ga0247680_1063993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	537	Open in IMG/M
3300025318\|Ga0209519_10771635	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300025324\|Ga0209640_10848145	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300025885\|Ga0207653_10091317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1067	Open in IMG/M
3300026277\|Ga0209350_1102703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	689	Open in IMG/M
3300026277\|Ga0209350_1164734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300026296\|Ga0209235_1267325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	524	Open in IMG/M
3300026297\|Ga0209237_1107081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1211	Open in IMG/M
3300026298\|Ga0209236_1009110	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5886	Open in IMG/M
3300026298\|Ga0209236_1194986	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300026298\|Ga0209236_1319844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	502	Open in IMG/M
3300026304\|Ga0209240_1221649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	574	Open in IMG/M
3300026306\|Ga0209468_1029981	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1904	Open in IMG/M
3300026310\|Ga0209239_1110586	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1153	Open in IMG/M
3300026312\|Ga0209153_1263141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	553	Open in IMG/M
3300026316\|Ga0209155_1024616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2489	Open in IMG/M
3300026317\|Ga0209154_1164406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	907	Open in IMG/M
3300026322\|Ga0209687_1078779	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1074	Open in IMG/M
3300026327\|Ga0209266_1030927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2837	Open in IMG/M
3300026328\|Ga0209802_1026214	All Organisms → cellular organisms → Bacteria	3120	Open in IMG/M
3300026328\|Ga0209802_1051123	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2044	Open in IMG/M
3300026328\|Ga0209802_1112312	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1209	Open in IMG/M
3300026329\|Ga0209375_1176826	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300026333\|Ga0209158_1127135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	949	Open in IMG/M
3300026334\|Ga0209377_1238612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	597	Open in IMG/M
3300026342\|Ga0209057_1107376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1096	Open in IMG/M
3300026343\|Ga0209159_1237679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	556	Open in IMG/M
3300026523\|Ga0209808_1054194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1816	Open in IMG/M
3300026523\|Ga0209808_1283938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	531	Open in IMG/M
3300026528\|Ga0209378_1030283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2859	Open in IMG/M
3300026530\|Ga0209807_1307073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	538	Open in IMG/M
3300026537\|Ga0209157_1197819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	853	Open in IMG/M
3300026538\|Ga0209056_10257702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1235	Open in IMG/M
3300026540\|Ga0209376_1139400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1177	Open in IMG/M
3300026540\|Ga0209376_1413387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300026548\|Ga0209161_10501134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	537	Open in IMG/M
3300026551\|Ga0209648_10757534	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300026552\|Ga0209577_10778825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	535	Open in IMG/M
3300027633\|Ga0208988_1134359	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300027669\|Ga0208981_1031843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1347	Open in IMG/M
3300027775\|Ga0209177_10494419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300027787\|Ga0209074_10486250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	533	Open in IMG/M
3300027787\|Ga0209074_10554265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300028720\|Ga0307317_10220460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	640	Open in IMG/M
3300028791\|Ga0307290_10059332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1383	Open in IMG/M
3300031152\|Ga0307501_10194002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	577	Open in IMG/M
3300032805\|Ga0335078_11180051	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.73%
Host-Associated	Host-Associated	2.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.61%
Aquatic	Environmental → Aquatic	5.11%
Plants	Host-Associated → Plants	2.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.61%
Sediment	Environmental → Aquatic → Sediment	4.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.27%
Freshwater	Environmental → Aquatic → Freshwater	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Loam	Environmental → Terrestrial → Soil → Loam	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.57%
Sand	Environmental → Terrestrial → Soil → Sand	0.57%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	43.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.14%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.57%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.14%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.57%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.57%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100924271	3300002558	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARA
JGI25383J37093_100209423	3300002560	Grasslands Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADV
JGI25383J37093_100438401	3300002560	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARAR
JGI25384J37096_100362943	3300002561	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTQTSSIASPADVVRAGLPP
JGI25382J37095_100223794	3300002562	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPADVARAGLPPPITAQLPA
JGI25382J37095_101279123	3300002562	Grasslands Soil	MRKREPRWQSAAERARVAAELIEEAESLTETSTIATPADVRRAGLPPPIRVELPPEPAAPLPMA
JGI25382J43887_101942241	3300002908	Grasslands Soil	VIRKREPRWQSAADRARVAAELIEEAQSLTDTSTIATPAEVRRAALPPPIEAALPQPPP
JGI25386J43895_100070321	3300002912	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADV
JGI25386J43895_100602861	3300002912	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVAR
JGI25386J43895_101785821	3300002912	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLP
JGI25617J43924_103122602	3300002914	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPIRVELPPPGARAAAP
Ga0066672_105672441	3300005167	Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISAELPSSAPPGGEAGSAP
Ga0066673_100098835	3300005175	Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIATPADVR
Ga0066690_107090831	3300005177	Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRDSLPPPVQIELPAGDAA
Ga0066688_104257051	3300005178	Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRR
Ga0066684_107216981	3300005179	Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIATPADVRRASLPPPIQA
Ga0066676_100586751	3300005186	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADLLRAALPPPVTAQLPQA
Ga0066682_107338672	3300005450	Soil	VNRRRERRWQSSQDRARVAAELIEEAESLTETGAIASPLDVARDK
Ga0070707_1012736531	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPIS
Ga0070699_1020232582	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGL
Ga0066695_101674551	3300005553	Soil	VNRPRRERRWQSSTERARVAAELMEEAESLTETGAIASPLDVAR
Ga0066695_105933892	3300005553	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAQLPASVPRPAPA
Ga0066707_100574803	3300005556	Soil	VIRKREPRWQTAAERARVAAELIEEAESLTETSSIASPADVAR
Ga0066707_101299833	3300005556	Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRDSLPPPVQIELPAGDAAHPPATASGPSGPP
Ga0066700_102470571	3300005559	Soil	MIRKREPHWQSAAERARVAAELMEEAESLTKTGGIASPAE
Ga0066691_101953293	3300005586	Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARASLPPPIRAQLPDAAPPTAPEGGAGGA
Ga0066696_100047801	3300006032	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPITAQLPAHVPSVPA
Ga0066656_102589273	3300006034	Soil	MIRKREPHWQSAAERARVAAELIEEAESLTKTGGIAS
Ga0066656_109421282	3300006034	Soil	VIRKRDPRWQTAAERARVAAELIEEAESLTETSTIASPADVARANLPPPIRVELPVEPEP
Ga0066652_1001803071	3300006046	Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTI
Ga0066653_102606753	3300006791	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAQLPG
Ga0066658_100049471	3300006794	Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTI
Ga0066665_110174981	3300006796	Soil	VIRKRDPRWQSAAERARVAAELIEEAESITETSTIASPADVARASLPPP
Ga0066659_111326721	3300006797	Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISLELPMPSTSPGGD
Ga0075431_1015459121	3300006847	Populus Rhizosphere	VNRRRERRWQSSQDRARVAAELIEEAESLTETGAIASPNDVARDKLPP
Ga0075425_1017629301	3300006854	Populus Rhizosphere	VIRKREPRWQSAADRARVAAELIEEAESLTDESTIASPADVARAGLPPPISAELPSGA
Ga0079216_107662083	3300006918	Agricultural Soil	VNRGGPRRERGGRWQTSQERARVAAELIEEAQSLTETGAIASPHDVARDQQ
Ga0079219_117828192	3300006954	Agricultural Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAELPLPAP
Ga0066710_1010308971	3300009012	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASP
Ga0066710_1025238863	3300009012	Grasslands Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIATPADVRRASLPPPIRAELPP
Ga0066710_1033956893	3300009012	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPA
Ga0066710_1043289672	3300009012	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARARLPPPIRAELPDPASPTAPDEGAPAGTAAPAT
Ga0066710_1047621562	3300009012	Grasslands Soil	VIHKREPRWQSAADRARVAAELLEEAESLSENSTIATP
Ga0099828_105324373	3300009089	Vadose Zone Soil	VIRKREPRWQSATERARVAAELIEEAESLTETSSIASPA
Ga0099827_115539121	3300009090	Vadose Zone Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISAELPSSAPPGREAAPGPD
Ga0114129_116767073	3300009147	Populus Rhizosphere	VNRRRERRWQSSQDRARVAAELIEEAESLTETGAIAS
Ga0075423_120747551	3300009162	Populus Rhizosphere	VNRRRERRWQSSQDRARVAAELIEEAESLTETGALASPNDVARDKLPPPLRI
Ga0105081_10380741	3300009806	Groundwater Sand	VNRRRERRWQSSHDRARVAAELIEEAESLTETGAIATPLDVE
Ga0134070_100980043	3300010301	Grasslands Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRDSLPPPVQIELPAGDAAHPPATASG
Ga0134088_102583271	3300010304	Grasslands Soil	VIRKREPRWQSAADRARVASDLIEEAESLAESNTIASSAEVRRDSAPPPVQVEL
Ga0134086_102038313	3300010323	Grasslands Soil	VIRKREPRWQTAAERARVAAELIEEAESLTETSSIASPADVARAGL
Ga0134086_103243131	3300010323	Grasslands Soil	MIRKREPRWQSAAERARVASELIEEAESLTETNTSASSAD
Ga0134086_104690331	3300010323	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIATPADVRRASLPPPIHAE
Ga0134111_101279211	3300010329	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIATPADVRRASLPPPIHAEL
Ga0134063_104992052	3300010335	Grasslands Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIATPADVRRASLPPPIQAELPPD
Ga0134066_101832291	3300010364	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPITAQLPAPAPP
Ga0134127_115661363	3300010399	Terrestrial Soil	VNRPKRERRWQSPRDRAHIAAELLEEAESLSENCLIATPAEL
Ga0134121_101872891	3300010401	Terrestrial Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSI
Ga0134121_115682452	3300010401	Terrestrial Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAQLPG
Ga0137392_104644533	3300011269	Vadose Zone Soil	VIRKREPRWQSATERARVAAELIEEAESLTQTSSI
Ga0137392_113411072	3300011269	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPADVARAGLPPPI
Ga0137391_101009523	3300011270	Vadose Zone Soil	VIRKREPRWQSATERARVAAELIEEAESLTETSSIASPAD
Ga0137393_105402113	3300011271	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARASLPPPI
Ga0137340_11094092	3300011405	Soil	MIRKREPRWQSAAERAQVAAELMEEAESLTARGIATPAEVKLSQLPPP
Ga0137353_10963612	3300012157	Soil	MIRKREPRWQSAAERAQVAAELMEEAESLTARGIATPAEVKLS
Ga0137364_103325953	3300012198	Vadose Zone Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIATPADVRR
Ga0137362_110310351	3300012205	Vadose Zone Soil	VIRKREPRWQTAAERARVAAELIEEAESLTETSSIASPA
Ga0137362_113150011	3300012205	Vadose Zone Soil	VIRKREPRWQSATERARVAAELIEEAESLTETNSIASPADVARA
Ga0137380_117722802	3300012206	Vadose Zone Soil	VIRKRDPRWQSAAERARVAAELMEEAESLTETSTIASPADVAR
Ga0137376_114326071	3300012208	Vadose Zone Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIATPADVARAG
Ga0137379_110814633	3300012209	Vadose Zone Soil	MIRKREPHWQSAAERARVAADLIEEAESLTKTGGV
Ga0137370_104849391	3300012285	Vadose Zone Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIATPADVRRASLPPPIQAEL
Ga0137370_109131801	3300012285	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAQLPASV
Ga0137387_109987711	3300012349	Vadose Zone Soil	MIRKREPHWQSAAERARVAADLTEEAEALTKTDGV
Ga0137386_111682371	3300012351	Vadose Zone Soil	MIRKREPHWQSAAERARVAAELIEEAESLTKTGGI
Ga0137367_111568531	3300012353	Vadose Zone Soil	VIRKREPRWHSAVDRARVASDLIEEAESLAETNTVASSAEVRRDSLPPPVQVELPAGDVGPPPATASGPSG
Ga0137366_103255813	3300012354	Vadose Zone Soil	VIRKREPRWQSAADRARVASDLIEEAESLAESNTVASSAEVRRDSLPPPVQVELPAGD
Ga0137369_101686821	3300012355	Vadose Zone Soil	VNRRHERRWQSSQDRARVAAELIEEAESLTETAAIASPVDVA
Ga0137371_107410861	3300012356	Vadose Zone Soil	VIRKREPRWHSAADRARVASDLTEEAESLAESNTVASSAEVRRDSLPPPVQVELP
Ga0137385_111157282	3300012359	Vadose Zone Soil	MIRKREPHWQSAAERARVAAELIEEAESLTKTGGIATPAEVDRDRLPPPLRLELPPAPP
Ga0137375_108098991	3300012360	Vadose Zone Soil	VNRRRERRWQSSQDRARVAAELIEEAESLTETAAIASPVDVARDK
Ga0137375_109679361	3300012360	Vadose Zone Soil	VNRRHERRWQSSQDRARVAAELIEEAESLTETAAIASPVDVARDK
Ga0137361_104455883	3300012362	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESITDTSTIASPADVARAGLPP
Ga0134054_12154862	3300012390	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPADVVRAGLPPPITAQLPAPALPPTS
Ga0134056_13016452	3300012397	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAQLPGHAPPVPAEAST
Ga0134055_11840282	3300012401	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIATPADVRRASLPPPIHAELPPEVRPELPIA
Ga0137373_103980883	3300012532	Vadose Zone Soil	VIRKREPRWQSATERARVAAELIEEAESLTETSTIASPADVARAG
Ga0137398_100026931	3300012683	Vadose Zone Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISAELPSS
Ga0137395_105310571	3300012917	Vadose Zone Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISAELPSSGPPGGLTAPA
Ga0137413_112817282	3300012924	Vadose Zone Soil	VIRKREPRWQSATERARVAAELIEEAESLTETSSIASPAEVARAGLPPPITAQL
Ga0134077_100863553	3300012972	Grasslands Soil	MIRKREPHWQSAAERARVAAELIEEAESLTKTGGIASPAEVDRDKLPPPLRLEVP
Ga0134087_103556093	3300012977	Grasslands Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRDS
Ga0134087_107731231	3300012977	Grasslands Soil	VIRKRDPRWQTAAERARVAAELIEEAESLTETSTIASPADVARA
Ga0134081_100648771	3300014150	Grasslands Soil	VIKKREPRWQSAEERARVAAELIDEAESLTETSTI
Ga0134081_102155382	3300014150	Grasslands Soil	VIRKREPRWHSAADRARVASDLTEEAESLAETNTVASSAEAGRDS
Ga0134075_102130991	3300014154	Grasslands Soil	VIHKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARAGLPPPIRAELPDPAPPAA
Ga0134075_103554733	3300014154	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARASLPP
Ga0134075_105296151	3300014154	Grasslands Soil	VIRKREPRWQSAAERARVAAELMEEAESLTDTSTIASPADVARASLPP
Ga0134078_102429733	3300014157	Grasslands Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIAT
Ga0134078_103065882	3300014157	Grasslands Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLP
Ga0137411_10145483	3300015052	Vadose Zone Soil	VNRRRERRWQSSHDRARVAAELIEEAESLTETGAIASPDDVARDKLPPPLR
Ga0137411_10985523	3300015052	Vadose Zone Soil	VNRRRERRWQSSHDRARVAAELIEEAESLTETGAIASPDDVARDKLPPPL
Ga0137411_12416491	3300015052	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPAEVARAGLPPPAP
Ga0137411_12703363	3300015052	Vadose Zone Soil	VNRRRERRWQSSHDRARVAAELIEEAESLTETGAI
Ga0137420_10879161	3300015054	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESLNETSTIATPADVRRAGLPPPIQAELP
Ga0137420_11186391	3300015054	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPGGGSP
Ga0137403_113202272	3300015264	Vadose Zone Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPADVARARLPPPITAQLPSPPPA
Ga0134072_103929361	3300015357	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIA
Ga0134089_101920503	3300015358	Grasslands Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAG
Ga0134085_102247171	3300015359	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAQLPGH
Ga0134112_102901751	3300017656	Grasslands Soil	MIRKREPHWQSAAERARVAAELIEEAESLTKTGGIASPAEVDRDKLPPP
Ga0134112_103627042	3300017656	Grasslands Soil	VIRKRDPRWQTAAERARVAAELIEEAESLTETSTIASPADVARANLPPPIRVELPVE
Ga0134083_101228843	3300017659	Grasslands Soil	MIRKREPHWQSAAERARVAAELIEEAESLTKTGGIA
Ga0187778_100307773	3300017961	Tropical Peatland	MRKREPRWLTASERARVAAELIEEAESLTRTGGIATPRDVSRDE
Ga0184634_1000096212	3300018031	Groundwater Sediment	VNRPPRRERRWQTSQERARVAAELIEEAESLTETGAIATPHDVARDKMPPP
Ga0184615_105723731	3300018059	Groundwater Sediment	VNRRRERRWQSSQDRARVAAELIEEAESLTETGAIASPRDVARDKLPP
Ga0184632_104700272	3300018075	Groundwater Sediment	MIRKRVPRWQSATDRSRVAAELIEEAESLSQTGLIATPLEVTRDELP
Ga0184625_104517301	3300018081	Groundwater Sediment	VNRRRERRWQSSQDRARVAAELIEEAESLTETGAIASPVDVARDKLPPPL
Ga0184629_105324911	3300018084	Groundwater Sediment	MIRKREPRWQSAAERAQVAAELMEEAESLTARGIATPAEVKLSQLPPPLHV
Ga0066655_104404041	3300018431	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGL
Ga0066667_113875501	3300018433	Grasslands Soil	VIKKREPRWQSAAERARVAAELMEEAESLTETSTIATPADVRRAS
Ga0066667_119594581	3300018433	Grasslands Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDENTIASPADVARAGLPPPVSGELPWASARPGDAAGLAR
Ga0066662_101321401	3300018468	Grasslands Soil	VIRKREPRWQSAVERARVAAELMEEAESLTETSTIATPADVRR
Ga0066662_129679592	3300018468	Grasslands Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISLELPMPSTS
Ga0066669_100621761	3300018482	Grasslands Soil	VIKKREPRWQSAAERARVAAELIDEAESLTETSTIATPADVRRASLPPPIQAE
Ga0066669_110415503	3300018482	Grasslands Soil	VIRKREPRWQSAADRARVASDLIEGAESLAETNTVASSAEVRRDSLPPPVQIELPAGDAAPPPAT
Ga0210378_102734621	3300021073	Groundwater Sediment	VNRRRERRWQSSQDRARVAAELIEEAESLTETAAIASPRDVAR
Ga0193719_103484971	3300021344	Soil	MIRKRAPRWQSAADRAQVAAELMEEAESLTATGIASPADVKRSQLPPPLHV
Ga0222622_113978822	3300022756	Groundwater Sediment	VNRRERRWQSSQDRARVAAELIEEAESLTETGAIASPND
Ga0247680_10639931	3300024246	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTDTSTIASPADVVRSGLPPPVTAELPVPLPV
Ga0209519_107716352	3300025318	Soil	VNRPRRERRWQSSQERARVAADLIEEAESLTETGAI
Ga0209640_108481451	3300025324	Soil	MIRKRVPRWQSSTDRSRVAAELIEEAESLSQTGLIATPSEVTRDELPPP
Ga0207653_100913171	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MIRKREPRWQSAAERARVAAELIEEAESLTETSTVASPADVAR
Ga0209350_11027033	3300026277	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPADV
Ga0209350_11647341	3300026277	Grasslands Soil	MHKRDPRWQSAADRARVAAELLEEAESLSENSTIATPAEVAR
Ga0209235_12673251	3300026296	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPADVARAGLPPPITAQLPAPTPRPA
Ga0209237_11070811	3300026297	Grasslands Soil	VIRKREPRWQTAAERARVAAELIEEAESLTETSSIASPADVARAGLPP
Ga0209236_10091101	3300026298	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARARHLGRR
Ga0209236_11949861	3300026298	Grasslands Soil	MIRKREPHWQSAAERARVAAELIEEAESLTKTGGIASPAE
Ga0209236_13198442	3300026298	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARARHL
Ga0209240_12216492	3300026304	Grasslands Soil	VIRKREPRWQSATERARVAAELIEEAESLTETNSI
Ga0209468_10299811	3300026306	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIAS
Ga0209239_11105863	3300026310	Grasslands Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARARLPPPIRAELPDP
Ga0209153_12631411	3300026312	Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAG
Ga0209155_10246163	3300026316	Soil	VIRKREPRWQTAAERARVAAELIEEAESLTETSSIASPADVARAGLPPP
Ga0209154_11644061	3300026317	Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVA
Ga0209687_10787791	3300026322	Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISAELPSSAPP
Ga0209266_10309271	3300026327	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADLLRAALPP
Ga0209802_10262141	3300026328	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPVDV
Ga0209802_10511231	3300026328	Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRDSL
Ga0209802_11123123	3300026328	Soil	VIRKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARASLPPPIR
Ga0209375_11768261	3300026329	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPP
Ga0209158_11271351	3300026333	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPA
Ga0209377_12386121	3300026334	Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISVELPPSAAPGGDAGAVP
Ga0209057_11073763	3300026342	Soil	VIHKREPRWQSAADRARVAAELLEEAESLSENSTIATPAEVARASLPPPIR
Ga0209159_12376792	3300026343	Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRD
Ga0209808_10541941	3300026523	Soil	VLRKREPRWQSAADRARVAAELIEEAASLTDENTIASPADVTRAGLPPPINVELPSSASSGGDGAAAPDAPPVAPTLDD
Ga0209808_12839381	3300026523	Soil	VIKKREPRWQSAEERARVAAELIDEAESLTETSTIATPADVRRASLPPPIQA
Ga0209378_10302834	3300026528	Soil	VIRKREPRWQTAAERARVAAELIEEAESLTETSSIASPADVARAGLPPPVTAQLPSPPSA
Ga0209807_13070732	3300026530	Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISAELPSSAPPGG
Ga0209157_11978193	3300026537	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADLLRAALPPPVTAQLPQAQPA
Ga0209056_102577023	3300026538	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADLLRAALPPP
Ga0209376_11394003	3300026540	Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRDSLPPP
Ga0209376_14133872	3300026540	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVTAQLPAHVPPVPA
Ga0209161_105011342	3300026548	Soil	VIRKREPRWQSAADRARVASDLIEEAESLAETNTVASSAEVRRDSLPPPVQ
Ga0209648_107575341	3300026551	Grasslands Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPAD
Ga0209577_107788252	3300026552	Soil	VIRKREPRWQSAADRARVAAELIEEAASLTDESTIASPADVARAGLPPPISAELPSSAP
Ga0208988_11343591	3300027633	Forest Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSSIASPADVARAGLP
Ga0208981_10318431	3300027669	Forest Soil	VIRKREPRWQSAAERARVAAELIEEAESITETSTIASPADVARAGLPPPVTAELP
Ga0209177_104944191	3300027775	Agricultural Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIAS
Ga0209074_104862502	3300027787	Agricultural Soil	MIRKREPRWQSAAERARVAAELIEEAESLTATSGIASPAEVARAGLPP
Ga0209074_105542652	3300027787	Agricultural Soil	MIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVARAGLPPPVT
Ga0307317_102204602	3300028720	Soil	VNRRRERRWQSSQDRARVAAELIEEAESLTETGVIASPVDVARDKLPPPLRVEA
Ga0307290_100593323	3300028791	Soil	VNRRERRWQSSQDRARVAAELIEEAESLTETGAIASPNDVA
Ga0307501_101940022	3300031152	Soil	VIRKREPRWQSAAERARVAAELIEEAESLTETSTIASPADVAR
Ga0335078_111800511	3300032805	Soil	VIRKRERRWRHAARERVAAELIEEAELLTATGALATPTELARTRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033746

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences