Metagenome / Metatranscriptome Family F033728

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033728
Family Type	Metagenome / Metatranscriptome
Number of Sequences	176
Average Sequence Length	62 residues
Representative Sequence	MGADNQAESAPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRQQAEELVAEFERFSSQGGKE
Number of Associated Samples	115
Number of Associated Scaffolds	176

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.98 %
% of genes near scaffold ends (potentially truncated)	39.77 %
% of genes from short scaffolds (< 2000 bps)	77.27 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.386 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.273 % of family members)
Environment Ontology (ENVO)	Unclassified (34.659 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.568 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.05% β-sheet: 0.00% Coil/Unstructured: 54.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 176 Family Scaffolds
PF04392	ABC_sub_bind	7.39
PF01381	HTH_3	6.82
PF09948	DUF2182	5.11
PF03401	TctC	1.14
PF00196	GerE	1.14
PF06707	DUF1194	1.14
PF01075	Glyco_transf_9	0.57
PF01844	HNH	0.57
PF13424	TPR_12	0.57
PF03545	YopE	0.57
PF01527	HTH_Tnp_1	0.57
PF06411	HdeA	0.57
PF07369	DUF1488	0.57
PF08734	GYD	0.57
PF13458	Peripla_BP_6	0.57
PF12844	HTH_19	0.57
PF13467	RHH_4	0.57
PF00072	Response_reg	0.57

COG ID	Name	Functional Category	% Frequency in 176 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.39
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.14
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.57
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.95 %
Unclassified	root	N/A	42.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.39 %
Unclassified	root	N/A	42.05 %
Viruses	superkingdom	All Organisms → Viruses	0.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.39 %
Unclassified	root	N/A	42.05 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.80 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.80 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.05 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	20.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.09 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.05 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.84 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.57 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.05 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.27 %
Sinorhizobium phage PBC5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	0.57 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.57 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.05 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.80 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.57 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.57 %
Sinorhizobium phage PBC5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	0.57 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.05 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.80 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.57 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.57 %
Sinorhizobium phage PBC5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	0.57 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1005263	Not Available	2094	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10051186	Not Available	1073	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1041736	Not Available	830	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10045380	Not Available	993	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10095993	Not Available	627	Open in IMG/M
3300000956\|JGI10216J12902_100484466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1245	Open in IMG/M
3300000956\|JGI10216J12902_102403554	Not Available	603	Open in IMG/M
3300001867\|JGI12627J18819_10247801	Not Available	717	Open in IMG/M
3300004633\|Ga0066395_10113376	Not Available	1325	Open in IMG/M
3300004633\|Ga0066395_10275340	Not Available	911	Open in IMG/M
3300004633\|Ga0066395_10809053	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005167\|Ga0066672_10303067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300005332\|Ga0066388_100906038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300005332\|Ga0066388_101276439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300005332\|Ga0066388_102395494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300005332\|Ga0066388_102710486	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300005332\|Ga0066388_103217288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300005343\|Ga0070687_101423393	Not Available	519	Open in IMG/M
3300005363\|Ga0008090_15901547	Not Available	576	Open in IMG/M
3300005435\|Ga0070714_101096881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300005437\|Ga0070710_11109284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300005445\|Ga0070708_100105166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2589	Open in IMG/M
3300005445\|Ga0070708_100138811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2253	Open in IMG/M
3300005445\|Ga0070708_102166887	Not Available	514	Open in IMG/M
3300005447\|Ga0066689_10017255	All Organisms → cellular organisms → Bacteria	3459	Open in IMG/M
3300005467\|Ga0070706_100104678	All Organisms → cellular organisms → Bacteria → Proteobacteria	2632	Open in IMG/M
3300005467\|Ga0070706_100689429	Not Available	948	Open in IMG/M
3300005467\|Ga0070706_100989961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M
3300005471\|Ga0070698_100495246	Not Available	1160	Open in IMG/M
3300005518\|Ga0070699_100033207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4457	Open in IMG/M
3300005549\|Ga0070704_100109556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2098	Open in IMG/M
3300005556\|Ga0066707_10327298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300005561\|Ga0066699_10431282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300005713\|Ga0066905_100753239	Not Available	840	Open in IMG/M
3300005713\|Ga0066905_101626384	Not Available	592	Open in IMG/M
3300005713\|Ga0066905_101657380	Not Available	586	Open in IMG/M
3300005764\|Ga0066903_100072688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4416	Open in IMG/M
3300005764\|Ga0066903_100613605	Not Available	1889	Open in IMG/M
3300005764\|Ga0066903_101821361	Not Available	1163	Open in IMG/M
3300005764\|Ga0066903_102013750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1109	Open in IMG/M
3300005764\|Ga0066903_102136591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1078	Open in IMG/M
3300005764\|Ga0066903_103061286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300005764\|Ga0066903_103451860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300005764\|Ga0066903_104693429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300005764\|Ga0066903_105374703	Not Available	676	Open in IMG/M
3300005764\|Ga0066903_105965572	Not Available	638	Open in IMG/M
3300005764\|Ga0066903_106395108	Not Available	614	Open in IMG/M
3300005764\|Ga0066903_107486188	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005764\|Ga0066903_107603376	Not Available	558	Open in IMG/M
3300005764\|Ga0066903_108803129	Not Available	512	Open in IMG/M
3300005764\|Ga0066903_109152748	Not Available	500	Open in IMG/M
3300006028\|Ga0070717_10529304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300006028\|Ga0070717_11111968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	719	Open in IMG/M
3300006028\|Ga0070717_11997876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300006800\|Ga0066660_10918583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300006852\|Ga0075433_10406099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300006871\|Ga0075434_100857406	Not Available	924	Open in IMG/M
3300009092\|Ga0105250_10438157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300009137\|Ga0066709_100222533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2501	Open in IMG/M
3300009147\|Ga0114129_10821358	Not Available	1184	Open in IMG/M
3300009147\|Ga0114129_12148753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300009162\|Ga0075423_10798732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300009488\|Ga0114925_11000736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300010043\|Ga0126380_11880884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300010046\|Ga0126384_11930739	Not Available	563	Open in IMG/M
3300010046\|Ga0126384_12041309	Not Available	549	Open in IMG/M
3300010047\|Ga0126382_10206231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1403	Open in IMG/M
3300010047\|Ga0126382_10403028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1068	Open in IMG/M
3300010047\|Ga0126382_10846861	Not Available	785	Open in IMG/M
3300010335\|Ga0134063_10522426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	596	Open in IMG/M
3300010358\|Ga0126370_10517104	Not Available	1012	Open in IMG/M
3300010358\|Ga0126370_11017067	Not Available	758	Open in IMG/M
3300010359\|Ga0126376_11948266	Not Available	628	Open in IMG/M
3300010361\|Ga0126378_10975911	Not Available	952	Open in IMG/M
3300010361\|Ga0126378_11024600	Not Available	928	Open in IMG/M
3300010361\|Ga0126378_11576880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300010366\|Ga0126379_10739954	Not Available	1079	Open in IMG/M
3300010366\|Ga0126379_13338191	Not Available	537	Open in IMG/M
3300010376\|Ga0126381_103339697	Not Available	632	Open in IMG/M
3300010398\|Ga0126383_10419033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1380	Open in IMG/M
3300010398\|Ga0126383_10752456	Not Available	1055	Open in IMG/M
3300010398\|Ga0126383_11775514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300010398\|Ga0126383_12755236	Not Available	574	Open in IMG/M
3300012198\|Ga0137364_10016002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4470	Open in IMG/M
3300012199\|Ga0137383_10097084	Not Available	2137	Open in IMG/M
3300012202\|Ga0137363_10469803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1054	Open in IMG/M
3300012205\|Ga0137362_10273629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1460	Open in IMG/M
3300012207\|Ga0137381_11519994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300012209\|Ga0137379_10475318	Not Available	1158	Open in IMG/M
3300012210\|Ga0137378_11468112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012211\|Ga0137377_10474139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300012351\|Ga0137386_10964368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	608	Open in IMG/M
3300012353\|Ga0137367_10456519	Not Available	902	Open in IMG/M
3300012360\|Ga0137375_10885258	Not Available	710	Open in IMG/M
3300016270\|Ga0182036_10071370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2265	Open in IMG/M
3300016294\|Ga0182041_10058501	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M
3300016319\|Ga0182033_10255166	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300016341\|Ga0182035_10061680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2596	Open in IMG/M
3300016341\|Ga0182035_11187744	Not Available	681	Open in IMG/M
3300016371\|Ga0182034_10119911	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300016404\|Ga0182037_10686451	Not Available	876	Open in IMG/M
3300016422\|Ga0182039_10768734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	853	Open in IMG/M
3300016422\|Ga0182039_10855936	Not Available	810	Open in IMG/M
3300018431\|Ga0066655_10077617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1799	Open in IMG/M
3300018433\|Ga0066667_10111727	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300018468\|Ga0066662_12613953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300021178\|Ga0210408_10217839	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300021560\|Ga0126371_10216880	All Organisms → cellular organisms → Bacteria → Proteobacteria	2016	Open in IMG/M
3300021560\|Ga0126371_10572536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1278	Open in IMG/M
3300025910\|Ga0207684_10070476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2971	Open in IMG/M
3300025910\|Ga0207684_10077325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2829	Open in IMG/M
3300025910\|Ga0207684_10102753	All Organisms → cellular organisms → Bacteria → Proteobacteria	2444	Open in IMG/M
3300025910\|Ga0207684_10240080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1563	Open in IMG/M
3300025922\|Ga0207646_10047735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3840	Open in IMG/M
3300025922\|Ga0207646_10050024	All Organisms → cellular organisms → Bacteria → Proteobacteria	3741	Open in IMG/M
3300025929\|Ga0207664_10841481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300025939\|Ga0207665_11197641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300026328\|Ga0209802_1219321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300026331\|Ga0209267_1094324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300026332\|Ga0209803_1110365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300026498\|Ga0257156_1135535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300026538\|Ga0209056_10061524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3281	Open in IMG/M
3300029636\|Ga0222749_10348257	Not Available	775	Open in IMG/M
3300031543\|Ga0318516_10054651	All Organisms → cellular organisms → Bacteria → Proteobacteria	2181	Open in IMG/M
3300031543\|Ga0318516_10062194	Not Available	2055	Open in IMG/M
3300031543\|Ga0318516_10784951	Not Available	538	Open in IMG/M
3300031543\|Ga0318516_10808204	Not Available	529	Open in IMG/M
3300031544\|Ga0318534_10839266	Not Available	515	Open in IMG/M
3300031545\|Ga0318541_10003302	All Organisms → cellular organisms → Bacteria → Proteobacteria	6477	Open in IMG/M
3300031545\|Ga0318541_10299248	Not Available	896	Open in IMG/M
3300031546\|Ga0318538_10037779	Not Available	2299	Open in IMG/M
3300031561\|Ga0318528_10023433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2978	Open in IMG/M
3300031640\|Ga0318555_10441243	Not Available	705	Open in IMG/M
3300031682\|Ga0318560_10018821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3124	Open in IMG/M
3300031682\|Ga0318560_10058973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1911	Open in IMG/M
3300031716\|Ga0310813_12167779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300031724\|Ga0318500_10146114	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300031724\|Ga0318500_10301784	Not Available	785	Open in IMG/M
3300031736\|Ga0318501_10010554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3554	Open in IMG/M
3300031751\|Ga0318494_10019173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3372	Open in IMG/M
3300031763\|Ga0318537_10185579	Not Available	774	Open in IMG/M
3300031763\|Ga0318537_10198588	Not Available	746	Open in IMG/M
3300031764\|Ga0318535_10049884	Not Available	1744	Open in IMG/M
3300031770\|Ga0318521_10484143	Not Available	742	Open in IMG/M
3300031781\|Ga0318547_10318478	Not Available	947	Open in IMG/M
3300031792\|Ga0318529_10001828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6602	Open in IMG/M
3300031795\|Ga0318557_10032917	All Organisms → cellular organisms → Bacteria → Proteobacteria	2106	Open in IMG/M
3300031832\|Ga0318499_10112372	Not Available	1057	Open in IMG/M
3300031832\|Ga0318499_10239718	Not Available	705	Open in IMG/M
3300031833\|Ga0310917_10083811	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300031835\|Ga0318517_10029092	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300031846\|Ga0318512_10098102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1374	Open in IMG/M
3300031860\|Ga0318495_10326208	Not Available	681	Open in IMG/M
3300031879\|Ga0306919_10046714	Not Available	2841	Open in IMG/M
3300031879\|Ga0306919_11360377	Not Available	536	Open in IMG/M
3300031880\|Ga0318544_10004837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4002	Open in IMG/M
3300031890\|Ga0306925_10273790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1818	Open in IMG/M
3300031890\|Ga0306925_11021921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300031894\|Ga0318522_10195696	Not Available	765	Open in IMG/M
3300031941\|Ga0310912_10425409	Not Available	1034	Open in IMG/M
3300031946\|Ga0310910_10222388	Not Available	1469	Open in IMG/M
3300031954\|Ga0306926_10254607	Not Available	2175	Open in IMG/M
3300031959\|Ga0318530_10073419	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300032008\|Ga0318562_10607395	Not Available	632	Open in IMG/M
3300032052\|Ga0318506_10038780	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300032059\|Ga0318533_10506713	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Sinorhizobium phage PBC5	885	Open in IMG/M
3300032059\|Ga0318533_10651390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300032060\|Ga0318505_10031192	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300032065\|Ga0318513_10288566	Not Available	796	Open in IMG/M
3300032066\|Ga0318514_10076845	Not Available	1661	Open in IMG/M
3300032089\|Ga0318525_10226243	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300032091\|Ga0318577_10047891	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300032261\|Ga0306920_100277477	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300032261\|Ga0306920_103191611	Not Available	614	Open in IMG/M
3300033290\|Ga0318519_10001703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7113	Open in IMG/M
3300033290\|Ga0318519_10049469	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.59%
Host-Associated	Host-Associated	3.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.02%
Plants	Host-Associated → Plants	3.41%
Aquatic	Environmental → Aquatic	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.41%
Marine	Environmental → Aquatic → Marine	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.61%
Loam	Environmental → Terrestrial → Soil → Loam	28.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.41%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.57%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.41%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.57%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.14%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.57%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10052633	3300000580	Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLDRGDGGQKTEAR*
AF_2010_repII_A1DRAFT_100511863	3300000597	Forest Soil	MGTDNQAESVPERKRLSIAKIKQDLAWRSVTGVPMEHIVLTRQQAEELVAVNILKK*
AF_2010_repII_A100DRAFT_10417362	3300000655	Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLVWRSVTGILREHIVLTRQQAEELVAQFERFSSQGGKE*
AF_2010_repII_A001DRAFT_100453802	3300000793	Forest Soil	MGADNQAESVPERKRLSAIAKIXQDLVWRSVTGILREHIVLTRQQAEELVAQFERFSSQGGKE*
AF_2010_repII_A001DRAFT_100959932	3300000793	Forest Soil	MGTDNXAESVPERKRLSIAKIKQDLAWRSVTGVPMEHIVLTRQQAEELVAVNILKK*
JGI10216J12902_1004844662	3300000956	Soil	MGADNQAERVLKRNSVIAKIKQDLAWSGATDSPMVQIVITRSQAEELVAEFERLSSLDRWCRRIVGLAP*
JGI10216J12902_1024035542	3300000956	Soil	MGADDQAESILERNRLSAIAKIKQDLASRSVAGVPLSQIVITRQQAEELVAEFERLKASHK*
JGI12627J18819_102478011	3300001867	Forest Soil	MGADDQAESRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEVEQL
Ga0066395_101133762	3300004633	Tropical Forest Soil	MGADNQAESVPERKRLSAVAKIRQDLAWCSVTGVPMEHIVLTRQQAEELVAEFERFSSQGGKE*
Ga0066395_102753401	3300004633	Tropical Forest Soil	MGVDNQAESGSKRKRLSAIAKIKQNLAWRSVTGVPREYIVLTRGHAEELVAEFERLSSQGEKD*
Ga0066395_108090532	3300004633	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRGQAEELVAEFERLSSQGGKE*
Ga0066672_103030673	3300005167	Soil	MGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0066388_1009060384	3300005332	Tropical Forest Soil	MADDQAESIRNRLSAIAKIKQDLAWRTVAGVPMSQIVITRQQAEELVAEIERLQACTHK*
Ga0066388_1012764391	3300005332	Tropical Forest Soil	MGADDQAESRLPAIAKIKQDLAWRSVAGVPMSQIVITRQQAEELIAEIERLQARTHK*
Ga0066388_1023954943	3300005332	Tropical Forest Soil	MGADNQAEIVPERKRLSAIAKIKQDLAWRSVTGILREHIVLTRQQAEELVAEFERFSSQGGKE*
Ga0066388_1027104862	3300005332	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRQHAEELIAAFERLSSQGRKE*
Ga0066388_1032172882	3300005332	Tropical Forest Soil	MGDDNQAESVPERKRLSAIAKIKQDLAWRSVTGILREHIVLTRSQAEELVAEFERLSSQGGKE
Ga0070687_1014233931	3300005343	Switchgrass Rhizosphere	MGADNQVESILERNRLSAIAKIKQDLAWRSVTAVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0008090_159015471	3300005363	Tropical Rainforest Soil	MGADNQAESVPERKRLSAIAKIKQDLVWRSVTGILREHIVLTRQQAEELVAEFERFSSQGGKE*
Ga0070714_1010968812	3300005435	Agricultural Soil	MGADNQAESILERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0070710_111092842	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGADKQAESTLERNRLSAIAKIKQDLAWRSVAGVPMSQIVITRQQAEELVAEVERLRATHK*
Ga0070708_1001051665	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGADNQAESILERNRLSAIAKIKQDLAWRSVTAVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0070708_1001388113	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGADKQAESTLERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELIAEVER
Ga0070708_1021668871	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDAEAESIRNRLSAIAKIKQDLAWRNVAGVPMSQIVITRQQAEELVAE
Ga0066689_100172554	3300005447	Soil	MGADKQAESTLERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0070706_1001046782	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGADIQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRRQAEELVAEFERLSSQGGKE*
Ga0070706_1006894293	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDAEAESIRNRLSAIAKIKQDLAWRNVAGVPMSQIVITRQQAEELVAEIERLQATHK*
Ga0070706_1009899613	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ESILERNRLSAIAKIKQDLAWRSVTAVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0070698_1004952463	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGADIQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRQQAEELVAEFERLSSQGEKE*
Ga0070699_1000332079	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGADNQAESILERNRLSAIAKIKQDLAWRTVAGVPMSQIVITRQQAEELVAEVERLQPCTHK*
Ga0070704_1001095563	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGADDQAEGRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0066707_103272981	3300005556	Soil	WSMGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0066699_104312821	3300005561	Soil	MGADNQAESILERNRLSAIAKIKQDLAWRSVTAVPMSQIVITRQQAEELIAEVERLR
Ga0066905_1007532392	3300005713	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDSGQKSGAR*
Ga0066905_1016263842	3300005713	Tropical Forest Soil	MGADNQAEGVPERKRLSAIAKIKQDLAWRSVTGVPMMKNIILTRGQAEELVAEFERLSSQGGKA*
Ga0066905_1016573801	3300005713	Tropical Forest Soil	MGADNQAESVLERNSAIAKIKQDLACGADGSPMVQIVITRSQAEELVAEFERLSSQGGKE
Ga0066903_1000726883	3300005764	Tropical Forest Soil	MGADNQAESAPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRQQAEELVAEFERFSSQGGKE*
Ga0066903_1006136051	3300005764	Tropical Forest Soil	MGADSQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERLSSQGRKE*
Ga0066903_1018213611	3300005764	Tropical Forest Soil	MGADKQAESTLERNRLSAIAKIKQDLAWRSVAGVPMSQIVITRQQAEELVAEIERLQACTHK*
Ga0066903_1020137502	3300005764	Tropical Forest Soil	MGTDNQAESVPERKRLSIAKIKQDLAWRSVTGVPMEHIVLARQQAEELVAVNILKK*
Ga0066903_1021365912	3300005764	Tropical Forest Soil	MGADNQAERVLKRNSVIAKIKQDLAWRGATDSPMVQIVITRSQAEELVAEFERLSSLDRWCRRIVGLAP*
Ga0066903_1030612861	3300005764	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVNGILKGHIVLTRQQAEELVAEFERFSSQAGKE*
Ga0066903_1034518602	3300005764	Tropical Forest Soil	MGADDQAESIRNRLSAIAKIKQDLAWRTVAGVPMSQIVITRQQAEELVAEIERLQACTHK
Ga0066903_1046934291	3300005764	Tropical Forest Soil	MGADNQAEIVPERKRLSAIAKIKQDLAWRSVTGILREHIVLTRQQAEELVAE
Ga0066903_1053747032	3300005764	Tropical Forest Soil	MGAVNQAESVPDRKRLSAIAKIKQDLAYRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGKE*
Ga0066903_1059655721	3300005764	Tropical Forest Soil	MGTDNQAESVSARSSIAKIKQDLAWRSVTGVPMEHIVLTHQQAEELVAVNILKK*
Ga0066903_1063951081	3300005764	Tropical Forest Soil	MSADNQAGSVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAQELVAEFERLSSQGGKSDLGGGLLDRGDGGQKTEAR*
Ga0066903_1074861882	3300005764	Tropical Forest Soil	MGADNQAKSVPEHKRLSAIAKIKQDLAWRSVTGISREHIVLTRSQAEELVAEFERLSSQGKE*
Ga0066903_1076033762	3300005764	Tropical Forest Soil	MLTLAGYLMGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGDGLLDRGDGGQKTEAR*
Ga0066903_1088031292	3300005764	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVPREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDGGQKTGAR*
Ga0066903_1091527481	3300005764	Tropical Forest Soil	MGADNQAESVSELTSDAKIKQDLGWRSVTGVSREHIVLTRSQAEELVAEFERLVHKEEKNELEIPR*
Ga0070717_105293044	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGADDQAESRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEIERLQACTHK*
Ga0070717_111119683	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGADKQAESTLERNRLSAIAKIKQDLAWRSVAGVPMSQIVITRQQAEELVAEIERIQACTHK*
Ga0070717_119978761	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGADDQAESRLSAIAKIKRDLAWRSVTGLPMSQIVITRQQAEELVAEVERLRATHK*
Ga0066660_109185833	3300006800	Soil	LGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0075433_104060992	3300006852	Populus Rhizosphere	MGADKQAESTLERNRLSAIAKAKQDLAWRSVTGVPMSQIVITRQQAEELVAEIERLQACTHK*
Ga0075434_1008574063	3300006871	Populus Rhizosphere	MGADKQAESTLERNRLSAIAKIKQDLAWRSVAGVPMSQIVITRQQAEEL
Ga0105250_104381571	3300009092	Switchgrass Rhizosphere	MGADKQAESTLERNRLSAIAKIKQDLAWRSVTGVPMVKSVITRQQAEELIAEVERLRATHK*
Ga0066709_1002225334	3300009137	Grasslands Soil	MGGDKQAESTLERNRLSAIAKAKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0114129_108213582	3300009147	Populus Rhizosphere	MGADNQAESVFERNRLSAIGKIKRDLAWRGPTGSPMVQIVITRSQAEELVAEFERLSSQMEMRGQPTSA*
Ga0114129_121487532	3300009147	Populus Rhizosphere	WWDSREWSMGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0075423_107987322	3300009162	Populus Rhizosphere	MGDNQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRQQAEELVAEFERLSSQGG
Ga0114925_110007362	3300009488	Deep Subsurface	MGAHDQAESRFSAFAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEVERLRATHK*
Ga0126380_118808841	3300010043	Tropical Forest Soil	MGADNQAERVLKRNSVIAKIKQDLAWRGATDSPMVQIVITRSQAEELVAEFERLSSQGGKA*
Ga0126384_119307392	3300010046	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLASRSVTDVPMEHIVLARQHAEELVAEFERLSSQGGRDMSVRWRNRWRKGSHS
Ga0126384_120413092	3300010046	Tropical Forest Soil	MGTDNQAERVLERNSAIAKIKQDLGWRGPTGSPMIQIAITRSQAEELVAEFERLSSQE
Ga0126382_102062313	3300010047	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDGGQKSGAR*
Ga0126382_104030281	3300010047	Tropical Forest Soil	MGTDNQAERVLERNSAIAKIKQDLGWRGPTGSPMIQIAITRSQAEELVAEFERLSSQEEMRGQSTSA*
Ga0126382_108468612	3300010047	Tropical Forest Soil	MGADDQAESIRNRLSAIAKIKQDLAWRTVAGVPMSQIAITRQQAEELVAEIERLQACTHK
Ga0134063_105224261	3300010335	Grasslands Soil	MGADKQAESTLERNRLSAIAKAKQDLAWRSVTGVPKSQIVITRQQAEELIAEVERL
Ga0126370_105171041	3300010358	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQVEELVAEFERFSSQGGKE*
Ga0126370_110170671	3300010358	Tropical Forest Soil	MGVDNQAESGPKRKRLSAIAKIKQNLAWRSVTGVPREYIVLTRGHAEELVAEFERLSSQGEKD*
Ga0126376_119482661	3300010359	Tropical Forest Soil	MGTDNQAESVPERKRLSAVAKIRQDLAWCSVTGVPMEHIVLTRQQAEELVAEFERFSSQGGKE*
Ga0126378_109759112	3300010361	Tropical Forest Soil	MGADNQADSVAERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLDRGDGGQKTEAR*
Ga0126378_110246002	3300010361	Tropical Forest Soil	MGADDQAESRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEGERLSATHK*
Ga0126378_115768803	3300010361	Tropical Forest Soil	MGVDNQAESGPKRKRLSAIAKIKQNLAWRSVTGVPREYIVLTRGHAEEL
Ga0126379_107399541	3300010366	Tropical Forest Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRGQAEELVAEFERLSSQG
Ga0126379_133381911	3300010366	Tropical Forest Soil	MGADNQAESVPERKRLPAIAKIKQDLAWRSVTGISREHIVLTSSQAEELVAEFERFSSQGGKE*
Ga0126381_1033396972	3300010376	Tropical Forest Soil	MGAGNQAESVPERKRLPAIAKIKQDLAWRSVTGISREHIVLTSSQAEELVAEFERFSSQGGKE*
Ga0126383_104190331	3300010398	Tropical Forest Soil	MGADNQAESVLERNSAIANIKQDLDWRGPTGSPMIQIAITRSQAEELVAEFERLSSQ*
Ga0126383_107524561	3300010398	Tropical Forest Soil	LMGADNQAESVPERKRLSAIAKIKQDLPWRSVTGVPMERIVLTRQQSEELVAEFERFRSQGRKE*
Ga0126383_117755141	3300010398	Tropical Forest Soil	MGADNQAEIVPERKRLSAIAKIKQDLAWRSVTGILREHIVLTRQQAEELVAEFERFSSQ
Ga0126383_127552362	3300010398	Tropical Forest Soil	MGADNQAERVLERKRLSAIAKIKQDLGWRGPTGTPMIQIAITRSQAEELVAEFERLSSQEEMRGQSTSA*
Ga0137364_100160022	3300012198	Vadose Zone Soil	MGADKQAESTLERNRLSAIAKAKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK*
Ga0137383_100970841	3300012199	Vadose Zone Soil	MGADIQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRRQAEELVAEFERLVATAAEKRA*
Ga0137363_104698032	3300012202	Vadose Zone Soil	MGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELVAEVERLRATHK*
Ga0137362_102736293	3300012205	Vadose Zone Soil	MGADDQAESRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEVERLRATHK*
Ga0137381_115199942	3300012207	Vadose Zone Soil	MGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERL
Ga0137379_104753182	3300012209	Vadose Zone Soil	MGDNQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRRQAEELVAEFERLVATAAEKRA*
Ga0137378_114681121	3300012210	Vadose Zone Soil	MGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIIITRQQAEELIAEVERLRATHK*
Ga0137377_104741393	3300012211	Vadose Zone Soil	MADKQAESTLERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK
Ga0137386_109643681	3300012351	Vadose Zone Soil	RKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRRQAEELVAEFERLVATAAEKRA*
Ga0137367_104565193	3300012353	Vadose Zone Soil	MGADIQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRQQAEE
Ga0137375_108852581	3300012360	Vadose Zone Soil	MGADIQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRRQAEELVAEFERLVATAAEDRG*
Ga0182036_100713705	3300016270	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEEL
Ga0182041_100585012	3300016294	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGGKSDLGGGLLDRGDGGQKTWAR
Ga0182033_102551661	3300016319	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLD
Ga0182035_100616801	3300016341	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSDL
Ga0182035_111877442	3300016341	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERF
Ga0182034_101199111	3300016371	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFER
Ga0182037_106864511	3300016404	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDL
Ga0182039_107687342	3300016422	Soil	GVPERKRLSAIAKIKQDLAWRSVTGVPMMKNIILTRGQAEELVAEFERLSSQGGKA
Ga0182039_108559361	3300016422	Soil	ESILERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEVERLRATHK
Ga0066655_100776175	3300018431	Grasslands Soil	WDSREWSMGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK
Ga0066667_101117272	3300018433	Grasslands Soil	MGADKQAESTLERNRLSAIAKAKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATH
Ga0066662_126139532	3300018468	Grasslands Soil	MGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK
Ga0210408_102178391	3300021178	Soil	MGADDQAESRLSAIAKIKRDLAWRSVTGLPMSQIVITRQQAEELVAEVERLRATHK
Ga0126371_102168801	3300021560	Tropical Forest Soil	MGADNQAESVPERKRLSAVAKIRQDLAWCSVTGVPMEHIVLTRQQAEELVAEFERFSSQGGKE
Ga0126371_105725363	3300021560	Tropical Forest Soil	MGVDNQAESGSKRKRLSAIAKIKQNLAWRSVTGVPREYIVLTRGHAEELVAEFERLSSQGEKD
Ga0207684_100704767	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGADKQAESTLERNRLSAIAKIKQDLAWRSVAGVPMSQIVITRQQAEELVAEVERLRATH
Ga0207684_100773253	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGADIQAESVPERKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRRQAEELVAEFERLSSQGGKE
Ga0207684_101027533	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDAEAESIRNRLSAIAKIKQDLAWRNVAGVPMSQIVITRQQAEELVAEIERLQATHK
Ga0207684_102400802	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGADNQVESILERNRLSAIAKIKQDLAWRSVTAVPMSQIVITRQQAEELIAEVERLRATH
Ga0207646_100477351	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLR
Ga0207646_100500243	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGADNQAESILERNRLSAIAKIKQDLAWRSVTAVPMSQIVITRQQAEELIAEVERLRATH
Ga0207664_108414812	3300025929	Agricultural Soil	MGADNQAESILERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATH
Ga0207665_111976411	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGADKQAESTLERNRLSAIAKIKQDLAWRSVAGVPMSQIVITRQQAEELVAEIERLQACTHKSQ
Ga0209802_12193211	3300026328	Soil	MGADKQAESTLERNRLSAIAKAKQDLAWRSVTGVPMSQIVITRQQAEELIAEV
Ga0209267_10943243	3300026331	Soil	MGADDQAESRLSAAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK
Ga0209803_11103653	3300026332	Soil	SMGAGDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK
Ga0257156_11355351	3300026498	Soil	MGADNQAESILERNHLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRAT
Ga0209056_100615246	3300026538	Soil	RGCGADIDTRWWDSREWSMGADDQAESRLSAIAKVKQDLAWRSVTGVPMSQIVITRQQAEELIAEVERLRATHK
Ga0222749_103482571	3300029636	Soil	MGADKQAESTLERNRLSAIAKIKQDLAWRSVAGVPMSQIVITRQQAEELVAEIERIQACTHK
Ga0318516_100546511	3300031543	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGERVI
Ga0318516_100621942	3300031543	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDGGQKTGAR
Ga0318516_107849511	3300031543	Soil	MGADNQAESVPERKRLPAIAKIKQDLAWRSVTGVSREHIVLTRSQAEELVAEFERLSSQGGKE
Ga0318516_108082041	3300031543	Soil	MGADNQAESVPDRKRLSAIAKIKQDLAWRSVTGILREHIVLTRQQAEELVAEFERFSSQEGKE
Ga0318534_108392661	3300031544	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLDRGDGGQKTEAR
Ga0318541_100033026	3300031545	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLSEHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDGGQKTGAR
Ga0318541_102992481	3300031545	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLERDDGGQKTEAR
Ga0318538_100377795	3300031546	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQEGKE
Ga0318528_100234335	3300031561	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDGGQKTGAR
Ga0318555_104412432	3300031640	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERF
Ga0318560_100188215	3300031682	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLSEHIVLTRQQAEELEQIPVEFTHNLRA
Ga0318560_100589736	3300031682	Soil	MGADNQAESVPDRKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVA
Ga0310813_121677792	3300031716	Soil	MGADDQAESRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELIADI
Ga0318500_101461141	3300031724	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLSEHIVLTRQQAEELEQIPV
Ga0318500_103017841	3300031724	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLG
Ga0318501_100105541	3300031736	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLG
Ga0318494_100191731	3300031751	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSD
Ga0318537_101855791	3300031763	Soil	DNQAESVPDRKRLSAIAKIKQDLAWRSVTGILREHIVLTRQQAEELVAEFERFSSQEGKE
Ga0318537_101985882	3300031763	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTPQQAEDRARLHPE
Ga0318535_100498842	3300031764	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLDRGDGGQKTWAR
Ga0318521_104841431	3300031770	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRG
Ga0318547_103184781	3300031781	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGGKSDLGGG
Ga0318529_100018281	3300031792	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGG
Ga0318557_100329171	3300031795	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFS
Ga0318499_101123724	3300031832	Soil	SVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDGGQKTGAR
Ga0318499_102397181	3300031832	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAQELV
Ga0310917_100838111	3300031833	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGGKE
Ga0318517_100290922	3300031835	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGILREHIVLTRQQAEELVAEFERFSSQEGKE
Ga0318512_100981024	3300031846	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSD
Ga0318495_103262081	3300031860	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGG
Ga0306919_100467142	3300031879	Soil	MGADNQAESILERNRLSAIAKIKQDLAWRSVTGAPMSQIVITRQQAEELVAEVERLRATH
Ga0306919_113603771	3300031879	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLDRGD
Ga0318544_100048378	3300031880	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLSEHIVLTRQQAEELEQIPVEFTHN
Ga0306925_102737902	3300031890	Soil	MGADNQAESILERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEVERLRATH
Ga0306925_110219212	3300031890	Soil	MGADNQAESILERDRLSAIAKIKQDLAWRSVTGAPMSQIVITRQQAEELVAEVERLRATH
Ga0318522_101956961	3300031894	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGGKSDLG
Ga0310912_104254093	3300031941	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLERD
Ga0310910_102223881	3300031946	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGLLDRG
Ga0306926_102546071	3300031954	Soil	DNQAESILERNRLSAIAKIKQDLAWRSVTGVPMSQIVITRQQAEELVAEVERLRATHK
Ga0318530_100734191	3300031959	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLSEHIVLTRQQAEELIPNPIDQN
Ga0318562_106073951	3300032008	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGDGGQKSGAR
Ga0318506_100387803	3300032052	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGGKS
Ga0318533_105067131	3300032059	Soil	MGADNQAESILERDRLSAIAKIKQDLAWRSVTGAPMSQIVITRQQAEE
Ga0318533_106513902	3300032059	Soil	MGADNQAESAPKRKRLSAIAKIKQDLAWRSVTGVPMEHIVLTRQQAEELVAEFERFSSQGGKE
Ga0318505_100311921	3300032060	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFS
Ga0318513_102885661	3300032065	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGG
Ga0318514_100768453	3300032066	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFE
Ga0318525_102262431	3300032089	Soil	MGADNQAESVPERKRLSAITKIKQDLAWRSVTGILREHIVLTRSQAEELVAEFERLSSQGGKE
Ga0318577_100478911	3300032091	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQGGKE
Ga0306920_1002774774	3300032261	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQG
Ga0306920_1031916112	3300032261	Soil	MGADNQAESVPERKRLPAIAKIKQDLAWRSVTGISREHIVLTRSQAEELVAEFERLSSQGGK
Ga0318519_100017037	3300033290	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVAGVLREHIVLTRQQAEELVAEFERFSSQGGKSDLGGGMLDRGGGGQKTGAR
Ga0318519_100494691	3300033290	Soil	MGADNQAESVPERKRLSAIAKIKQDLAWRSVTGVLREHIVLTRQQAEELIAEFERFSSQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033728

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences