NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F033562

Metagenome / Metatranscriptome Family F033562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F033562
Family Type Metagenome / Metatranscriptome
Number of Sequences 177
Average Sequence Length 77 residues
Representative Sequence MSDEPLRLMLAKAVQLLRGATDLTMDEVIGLRALPESVRTPDVCYSLGVIEGAAAALRATPREMLEDHDLLTAPKR
Number of Associated Samples 148
Number of Associated Scaffolds 177

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 37.85 %
% of genes near scaffold ends (potentially truncated) 20.34 %
% of genes from short scaffolds (< 2000 bps) 78.53 %
Associated GOLD sequencing projects 131
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.480 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(9.604 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.633 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.12%    β-sheet: 0.00%    Coil/Unstructured: 52.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.177.1.1: Sigma2 domain of RNA polymerase sigma factorsd1siga11sig0.64096
a.104.1.0: automated matchesd2fdva_2fdv0.60394
d.163.1.1: Lambda integrase-like, catalytic cored1f44a21f440.59731
a.104.1.0: automated matchesd4dvqa_4dvq0.59094
a.70.2.0: automated matchesd4gkfa_4gkf0.58787


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 177 Family Scaffolds
PF00313CSD 8.47
PF00069Pkinase 6.78
PF00270DEAD 5.08
PF00076RRM_1 3.95
PF00583Acetyltransf_1 2.82
PF01163RIO1 1.69
PF03880DbpA 1.69
PF02518HATPase_c 1.13
PF00462Glutaredoxin 1.13
PF02954HTH_8 1.13
PF16123HAGH_C 1.13
PF00582Usp 1.13
PF01161PBP 0.56
PF00849PseudoU_synth_2 0.56
PF04015DUF362 0.56
PF136402OG-FeII_Oxy_3 0.56
PF00498FHA 0.56
PF02517Rce1-like 0.56
PF09723Zn-ribbon_8 0.56
PF10282Lactonase 0.56
PF00413Peptidase_M10 0.56
PF01872RibD_C 0.56
PF12850Metallophos_2 0.56
PF08240ADH_N 0.56
PF03379CcmB 0.56
PF01207Dus 0.56
PF06241Castor_Poll_mid 0.56
PF12697Abhydrolase_6 0.56
PF01648ACPS 0.56
PF13442Cytochrome_CBB3 0.56
PF01433Peptidase_M1 0.56
PF12894ANAPC4_WD40 0.56
PF00089Trypsin 0.56
PF13545HTH_Crp_2 0.56
PF11325DUF3127 0.56
PF00756Esterase 0.56
PF13564DoxX_2 0.56
PF05368NmrA 0.56
PF01734Patatin 0.56
PF05572Peptidase_M43 0.56
PF07849DUF1641 0.56
PF09423PhoD 0.56
PF01042Ribonuc_L-PSP 0.56
PF100142OG-Fe_Oxy_2 0.56
PF00144Beta-lactamase 0.56
PF00118Cpn60_TCP1 0.56
PF01402RHH_1 0.56
PF11127DUF2892 0.56
PF13620CarboxypepD_reg 0.56
PF13648Lipocalin_4 0.56
PF05147LANC_like 0.56
PF01471PG_binding_1 0.56
PF00656Peptidase_C14 0.56
PF00160Pro_isomerase 0.56
PF00067p450 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 177 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 27.12
COG0513Superfamily II DNA and RNA helicaseReplication, recombination and repair [L] 5.08
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 0.56
COG5549Predicted Zn-dependent proteasePosttranslational modification, protein turnover, chaperones [O] 0.56
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 0.56
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.56
COG4403Lantibiotic modifying enzymeDefense mechanisms [V] 0.56
COG4249Uncharacterized conserved protein, contains caspase domainGeneral function prediction only [R] 0.56
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 0.56
COG2427Uncharacterized conserved protein YjgD, DUF1641 familyFunction unknown [S] 0.56
COG2386ABC-type transport system involved in cytochrome c biogenesis, permease componentPosttranslational modification, protein turnover, chaperones [O] 0.56
COG2367Beta-lactamase class ADefense mechanisms [V] 0.56
COG2124Cytochrome P450Defense mechanisms [V] 0.56
COG2006Uncharacterized conserved protein, DUF362 familyFunction unknown [S] 0.56
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.56
COG1881Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) familyGeneral function prediction only [R] 0.56
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 0.56
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.56
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.56
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.56
COG1187Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605Translation, ribosomal structure and biogenesis [J] 0.56
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 0.56
COG0564Pseudouridine synthase RluA, 23S rRNA- or tRNA-specificTranslation, ribosomal structure and biogenesis [J] 0.56
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.56
COG0308Aminopeptidase N, contains DUF3458 domainAmino acid transport and metabolism [E] 0.56
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.56
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 0.56


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.48 %
UnclassifiedrootN/A4.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c2267592All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium962Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c2269545Not Available815Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105702860All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1037Open in IMG/M
3300000890|JGI11643J12802_10596395All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300000956|JGI10216J12902_100038566All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria881Open in IMG/M
3300000956|JGI10216J12902_111679283All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium688Open in IMG/M
3300000956|JGI10216J12902_123120832All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium558Open in IMG/M
3300001213|JGIcombinedJ13530_105729451All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium645Open in IMG/M
3300004114|Ga0062593_101562053All Organisms → cellular organisms → Bacteria → Proteobacteria714Open in IMG/M
3300004643|Ga0062591_102727966All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium522Open in IMG/M
3300004778|Ga0062383_10669233All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300005177|Ga0066690_10552002All Organisms → cellular organisms → Bacteria → Proteobacteria771Open in IMG/M
3300005238|Ga0073692_1006186All Organisms → cellular organisms → Bacteria2294Open in IMG/M
3300005258|Ga0074071_1001690All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales7257Open in IMG/M
3300005258|Ga0074071_1011641All Organisms → cellular organisms → Bacteria2094Open in IMG/M
3300005327|Ga0070658_10869976All Organisms → cellular organisms → Bacteria → Proteobacteria783Open in IMG/M
3300005329|Ga0070683_100328532All Organisms → cellular organisms → Bacteria → Proteobacteria1456Open in IMG/M
3300005330|Ga0070690_100053657All Organisms → cellular organisms → Bacteria2579Open in IMG/M
3300005334|Ga0068869_100107971All Organisms → cellular organisms → Bacteria → Proteobacteria2114Open in IMG/M
3300005337|Ga0070682_100297418All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300005340|Ga0070689_100718429All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium873Open in IMG/M
3300005343|Ga0070687_100144302All Organisms → cellular organisms → Bacteria → Proteobacteria1390Open in IMG/M
3300005356|Ga0070674_100153663All Organisms → cellular organisms → Bacteria → Proteobacteria1739Open in IMG/M
3300005365|Ga0070688_100435704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium OLB15977Open in IMG/M
3300005434|Ga0070709_11734658All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium510Open in IMG/M
3300005438|Ga0070701_10457501All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium820Open in IMG/M
3300005445|Ga0070708_100807099All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria882Open in IMG/M
3300005445|Ga0070708_101130496All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium733Open in IMG/M
3300005456|Ga0070678_100001447All Organisms → cellular organisms → Bacteria12637Open in IMG/M
3300005466|Ga0070685_10267313All Organisms → cellular organisms → Bacteria → Proteobacteria1140Open in IMG/M
3300005466|Ga0070685_10792853All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300005467|Ga0070706_100076128All Organisms → cellular organisms → Bacteria → Proteobacteria3106Open in IMG/M
3300005468|Ga0070707_101669394All Organisms → cellular organisms → Bacteria → Proteobacteria604Open in IMG/M
3300005471|Ga0070698_100003337All Organisms → cellular organisms → Bacteria17667Open in IMG/M
3300005471|Ga0070698_100300019All Organisms → cellular organisms → Bacteria1537Open in IMG/M
3300005518|Ga0070699_100611392All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300005536|Ga0070697_100776400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium847Open in IMG/M
3300005549|Ga0070704_100528970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1027Open in IMG/M
3300005577|Ga0068857_100364925All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1339Open in IMG/M
3300005577|Ga0068857_102036025All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium563Open in IMG/M
3300005615|Ga0070702_101780841All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium514Open in IMG/M
3300005836|Ga0074470_10714403All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae2891Open in IMG/M
3300005836|Ga0074470_11296939All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5497Open in IMG/M
3300005841|Ga0068863_101381743All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium712Open in IMG/M
3300005843|Ga0068860_100318698All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300005986|Ga0075152_10409271All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium747Open in IMG/M
3300005988|Ga0075160_10388370All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium758Open in IMG/M
3300006028|Ga0070717_10002314All Organisms → cellular organisms → Bacteria13380Open in IMG/M
3300006028|Ga0070717_11670886All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium576Open in IMG/M
3300006046|Ga0066652_101155250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales733Open in IMG/M
3300006056|Ga0075163_11119275All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium795Open in IMG/M
3300006173|Ga0070716_101450877All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium559Open in IMG/M
3300006237|Ga0097621_100510462All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1090Open in IMG/M
3300006358|Ga0068871_101255478All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium696Open in IMG/M
3300006845|Ga0075421_101780408All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium663Open in IMG/M
3300006847|Ga0075431_101161908All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium735Open in IMG/M
3300006854|Ga0075425_101231090All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300006854|Ga0075425_101408610All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium788Open in IMG/M
3300006880|Ga0075429_100135892All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2152Open in IMG/M
3300006880|Ga0075429_100202141All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1741Open in IMG/M
3300006880|Ga0075429_101910002All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium514Open in IMG/M
3300006894|Ga0079215_11421146All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium543Open in IMG/M
3300006904|Ga0075424_102539898All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium536Open in IMG/M
3300006930|Ga0079303_10063377All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1333Open in IMG/M
3300006930|Ga0079303_10174906All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium850Open in IMG/M
3300007076|Ga0075435_101031471All Organisms → cellular organisms → Bacteria → Proteobacteria718Open in IMG/M
3300007521|Ga0105044_10222321All Organisms → cellular organisms → Bacteria1880Open in IMG/M
3300009091|Ga0102851_10972131All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium921Open in IMG/M
3300009094|Ga0111539_13170981All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium530Open in IMG/M
3300009098|Ga0105245_10000107All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales80101Open in IMG/M
3300009111|Ga0115026_10035796All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2612Open in IMG/M
3300009143|Ga0099792_10813691All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium613Open in IMG/M
3300009167|Ga0113563_10036425All Organisms → cellular organisms → Bacteria3995Open in IMG/M
3300009177|Ga0105248_10696536All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1146Open in IMG/M
3300009540|Ga0073899_10042179All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3644Open in IMG/M
3300009870|Ga0131092_10000670All Organisms → cellular organisms → Bacteria → Proteobacteria107004Open in IMG/M
3300009870|Ga0131092_10998329All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria677Open in IMG/M
3300009873|Ga0131077_10028324All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola8980Open in IMG/M
3300010117|Ga0127449_1014113All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium525Open in IMG/M
3300010371|Ga0134125_11891415All Organisms → cellular organisms → Bacteria → Proteobacteria649Open in IMG/M
3300010401|Ga0134121_10051601All Organisms → cellular organisms → Bacteria → Proteobacteria3373Open in IMG/M
3300010869|Ga0126359_1452516All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1129Open in IMG/M
3300011333|Ga0127502_10172411All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium792Open in IMG/M
3300011431|Ga0137438_1005149All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3633Open in IMG/M
3300011438|Ga0137451_1007023All Organisms → cellular organisms → Bacteria3300Open in IMG/M
3300011444|Ga0137463_1044330All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1650Open in IMG/M
3300012212|Ga0150985_100293978All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1156Open in IMG/M
3300012224|Ga0134028_1282268All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium513Open in IMG/M
3300012403|Ga0134049_1072329All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300012469|Ga0150984_108470186All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium535Open in IMG/M
3300012893|Ga0157284_10049720All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium952Open in IMG/M
3300012907|Ga0157283_10345625All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium534Open in IMG/M
3300012929|Ga0137404_10338287All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1314Open in IMG/M
3300012931|Ga0153915_10045276Not Available4492Open in IMG/M
3300012931|Ga0153915_10634624All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1230Open in IMG/M
3300012943|Ga0164241_10132044All Organisms → cellular organisms → Bacteria → Acidobacteria1789Open in IMG/M
3300012943|Ga0164241_10274204All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1206Open in IMG/M
3300012956|Ga0154020_10875343Not Available703Open in IMG/M
3300012960|Ga0164301_11521700All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300013297|Ga0157378_11234250All Organisms → cellular organisms → Bacteria → Proteobacteria788Open in IMG/M
3300014322|Ga0075355_1052231All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium918Open in IMG/M
3300014325|Ga0163163_10598065All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1166Open in IMG/M
3300014326|Ga0157380_12386580All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium594Open in IMG/M
3300014969|Ga0157376_10199911All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1838Open in IMG/M
3300017792|Ga0163161_10726111All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300017961|Ga0187778_11106216All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300017966|Ga0187776_11298070All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium550Open in IMG/M
3300018432|Ga0190275_12478722All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium596Open in IMG/M
3300018465|Ga0190269_10341719All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria895Open in IMG/M
3300019880|Ga0193712_1090490All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium664Open in IMG/M
3300019890|Ga0193728_1002231All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria9966Open in IMG/M
3300021057|Ga0196981_1005911All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus2098Open in IMG/M
(restricted) 3300021517|Ga0224723_1138221All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium742Open in IMG/M
3300022886|Ga0247746_1087828All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300024056|Ga0124853_1157113All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1745Open in IMG/M
3300024182|Ga0247669_1014695All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1390Open in IMG/M
3300024288|Ga0179589_10522133All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300025877|Ga0208460_10266366All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium643Open in IMG/M
3300025909|Ga0207705_10915365All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300025910|Ga0207684_10172970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum1862Open in IMG/M
3300025912|Ga0207707_10491282All Organisms → cellular organisms → Bacteria → Proteobacteria1048Open in IMG/M
3300025918|Ga0207662_10074616All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2059Open in IMG/M
3300025918|Ga0207662_10962906All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium605Open in IMG/M
3300025918|Ga0207662_11048848All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium579Open in IMG/M
3300025922|Ga0207646_11350618All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium621Open in IMG/M
3300025927|Ga0207687_10001113All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria18272Open in IMG/M
3300025933|Ga0207706_10784617Not Available810Open in IMG/M
3300025936|Ga0207670_10026335All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3663Open in IMG/M
3300025936|Ga0207670_10973597All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium713Open in IMG/M
3300025936|Ga0207670_11819103All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria518Open in IMG/M
3300025937|Ga0207669_10636941All Organisms → cellular organisms → Bacteria → Proteobacteria870Open in IMG/M
3300025942|Ga0207689_11666173Not Available529Open in IMG/M
3300025972|Ga0207668_10258812All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1417Open in IMG/M
3300026035|Ga0207703_12172141All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium531Open in IMG/M
3300026116|Ga0207674_10251433All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1714Open in IMG/M
3300026121|Ga0207683_10002375All Organisms → cellular organisms → Bacteria → Proteobacteria16435Open in IMG/M
3300026121|Ga0207683_10238851All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1657Open in IMG/M
3300026983|Ga0207856_1002131All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium4238Open in IMG/M
3300027781|Ga0209175_10191183All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium875Open in IMG/M
3300027789|Ga0209174_10337796All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium654Open in IMG/M
3300027843|Ga0209798_10521152All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium539Open in IMG/M
3300027850|Ga0209591_10000195All Organisms → cellular organisms → Bacteria → Proteobacteria79819Open in IMG/M
3300027880|Ga0209481_10028578All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2511Open in IMG/M
3300028379|Ga0268266_10932971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium840Open in IMG/M
3300028379|Ga0268266_11487270All Organisms → cellular organisms → Bacteria → Proteobacteria653Open in IMG/M
3300028802|Ga0307503_10717340All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300028819|Ga0307296_10719193All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium545Open in IMG/M
3300029923|Ga0311347_10942972All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium524Open in IMG/M
3300030000|Ga0311337_11424399All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria607Open in IMG/M
3300030010|Ga0302299_10329822Not Available790Open in IMG/M
3300030010|Ga0302299_10557230All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium572Open in IMG/M
3300030613|Ga0299915_10000032All Organisms → cellular organisms → Bacteria → Proteobacteria99879Open in IMG/M
3300031232|Ga0302323_100832787Not Available1016Open in IMG/M
3300031616|Ga0307508_10013716All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales7399Open in IMG/M
3300031616|Ga0307508_10153846All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1904Open in IMG/M
3300031711|Ga0265314_10237640All Organisms → cellular organisms → Bacteria → Proteobacteria1053Open in IMG/M
3300031720|Ga0307469_11381593Not Available671Open in IMG/M
3300031902|Ga0302322_103804800All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium516Open in IMG/M
3300031938|Ga0308175_100000239All Organisms → cellular organisms → Bacteria → Proteobacteria42033Open in IMG/M
3300031996|Ga0308176_11793183All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium655Open in IMG/M
3300032005|Ga0307411_12338184All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium502Open in IMG/M
3300032075|Ga0310890_10856357All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria723Open in IMG/M
3300032157|Ga0315912_10014972All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium6463Open in IMG/M
3300032157|Ga0315912_10726077All Organisms → cellular organisms → Bacteria → Proteobacteria791Open in IMG/M
3300032157|Ga0315912_10835140All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300032805|Ga0335078_12468808All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium538Open in IMG/M
3300032892|Ga0335081_12439553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium542Open in IMG/M
3300032893|Ga0335069_10686102All Organisms → cellular organisms → Bacteria → Proteobacteria1166Open in IMG/M
3300033179|Ga0307507_10035148All Organisms → cellular organisms → Bacteria → Proteobacteria5155Open in IMG/M
3300033408|Ga0316605_10242926All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1545Open in IMG/M
3300033413|Ga0316603_10006904All Organisms → cellular organisms → Bacteria → Proteobacteria6683Open in IMG/M
3300033413|Ga0316603_10217396All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1639Open in IMG/M
3300033480|Ga0316620_11669677All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium631Open in IMG/M
3300033486|Ga0316624_10737234All Organisms → cellular organisms → Bacteria → Proteobacteria870Open in IMG/M
3300033489|Ga0299912_10543302All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria928Open in IMG/M
3300033513|Ga0316628_100005604All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria10118Open in IMG/M
3300033513|Ga0316628_102677802All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium657Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.47%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere6.78%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.21%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.39%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen3.39%
Wastewater EffluentEngineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent2.82%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.69%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.69%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.69%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.69%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.69%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.69%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.69%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.13%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.13%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.13%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.13%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.13%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.13%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.13%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.13%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.13%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge1.13%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.56%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.56%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.56%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.56%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.56%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.56%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.56%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.56%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.56%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.56%
Active SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge0.56%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge0.56%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.56%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005238Microbial communities on the surface of aged kaolinite enhanced biochar from soil in Sydney, AustraliaEnvironmentalOpen in IMG/M
3300005258Microbial communities on the surface of bentonite enhanced biocharEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005986Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNAEngineeredOpen in IMG/M
3300005988Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNAEngineeredOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006056Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNAEngineeredOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007521Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009540Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-PhEngineeredOpen in IMG/M
3300009870Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plantEngineeredOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010117Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010869Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012224Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012956Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MGEngineeredOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014322Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300019880Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300021057Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_20-13CEnvironmentalOpen in IMG/M
3300021517 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR2_MetaGEnvironmentalOpen in IMG/M
3300022886Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5EnvironmentalOpen in IMG/M
3300024056Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300024182Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025877Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026983Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)EnvironmentalOpen in IMG/M
3300027781Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNA (SPAdes)EngineeredOpen in IMG/M
3300027789Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B DNA (SPAdes)EngineeredOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027850Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300029923II_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030010Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4EnvironmentalOpen in IMG/M
3300030613Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227EnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_226759223300000033SoilPIHPRRTRVGWVMVDDPLRIMLTKAVEQLRAATDLTMDEVIGIRRLPDSARTPDVCYSLGVIEGAATAMRATPRELLEDHDLLTAPKRS*
ICChiseqgaiiDRAFT_226954513300000033SoilMSDDPLRTMLTKAVEQLRAATDLTMDEVIGIRRLPDSARTPNVCYSLGVIEGAATALRATPRELLEDHDLLTAPKRS*
INPhiseqgaiiFebDRAFT_10570286033300000364SoilMSDEPLRNLLTNAVAQLRAATDLTMDEVIGIRALPEASRTPDVCYALGVIHGAAAALRATPREMLEDHDLLTAPKRT*
JGI11643J12802_1059639513300000890SoilMLSKAVEQLRAATELTIDEVLGVRALRALPDAVRTPEVCYSLGIIEGAATALRATPRELLEDHDLLIAPKRS*
JGI10216J12902_10003856613300000956SoilMSDEPLRNLLTNAVAQLRAATDLTMDEVIGIHALPESARTPDVGYALGVIHGAAAALRATPREMLEDHDLLTA
JGI10216J12902_11167928323300000956SoilMSDESLRVMLKTAVEQLRGATDLTMDEIIGLRALPESARTPEVCYSLGIIEGAAAALRATRREMLEDHELLTADKRA*
JGI10216J12902_12312083223300000956SoilEPLRILLTKAVEQLRAATDLTMDEVIGLRALPESARTAENCYSLGIIVGAASALRATPREMLEDHDLLTAPKRA*
JGIcombinedJ13530_10572945113300001213WetlandMSDDPLRALVTHAVAQLRAATDLTMDEVIGIRALPESARTPDVGYALGVIHGAAAALRATPREMLEDLELLTAPKRT*
Ga0062593_10156205323300004114SoilMSDEPLRNLLTNAVAQLRAATDLTMDEVIGIRALPEASRTPDVCYALGVIDGAAAALRATPREMLEDHEL
Ga0062591_10272796613300004643SoilMSDEPLRNLLTNAVAQLRAATDLTMDEVIGIRALPEASRTPDVCYALGVIDGAAAALRATPREMLEDHELLTAPKRT*
Ga0062383_1066923323300004778Wetland SedimentMSDDALRLMLTTAVEQLRGATDLTMHEIIGLRALPESARTPEVCYSLGIIEGAAAALRATPKEMLEDHDLLTAAKRTS*
Ga0066690_1055200223300005177SoilMSDERLLSMLTKAVEQLRGATDLTMNEIIGLSALPESARTPEVCYSLGIIEGAATALRATPKEMLEDHDLLTAVKRG*
Ga0073692_100618643300005238SoilMGDDALRLVLAEAVELLRAATELTMDEVIGVRAIRALPETARTPEVCYALGVIEGAAAALRATPREMLEDHELLTAVKGG*
Ga0074071_100169083300005258SoilVATAVAHLRTATDLTMDEVIGIAALPESVRTPDVAYALGVIHGAAAALRATSREMLEDLDLLTAPKRT*
Ga0074071_101164123300005258SoilMGDDALRLVLAEAVELLRAATELTMDEVIGVRAIRALPETARTPEVCYALGVIEGAAAALRATPREMLEDHELLTAAKGG*
Ga0070658_1086997623300005327Corn RhizosphereMSEDRLRIMLLKAVEQLRTATELTMDEVIGIRALPESARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAQKRP*
Ga0070683_10032853223300005329Corn RhizosphereMGDDALRLVLAEAVELLRAATELTMDEVIGVRAIRALPEAARTPEVCYALGVIEGAAAALRATPREMLEDHELLTAAKGG*
Ga0070690_10005365723300005330Switchgrass RhizosphereMPDDALRLMIAKAVHQLRMATDLTMTEIIGISALPETARTPDVCYSLGVLEGAAAALGATRQEMLEDFDLLTAPRR*
Ga0068869_10010797123300005334Miscanthus RhizosphereMSDERLRFMLVKAVEQLRAATDLTMDEVIGIRALPETARTPDVCYSLGIIEGAATALHATPREMLQDHDLLIAPKRS*
Ga0070682_10029741823300005337Corn RhizosphereMADDALRQVLVTAVAQLRAATELTMDEVIGVRAIRALPEAARTPEVCYALGVIEGAATALRATPREMLEDHDLLTAAKGA*
Ga0070689_10071842913300005340Switchgrass RhizosphereQLRAATDLTMTEVIGVSALPPDTRTPEVCYALGVLEGAATALRATRQELLDDLDLLTAPRRTPEA*
Ga0070687_10014430223300005343Switchgrass RhizosphereMSDDALRTMIAKAVEQLRAATDLTMTEVIGVSALPPDTRTPEVCYALGVLEGAATALRATRQELLDDLDLLTAPRRTPEA*
Ga0070674_10015366323300005356Miscanthus RhizosphereMLLKAVEQLRAATELTMDEVIGIRALPETARTPEVCYSLGIIEGAATALRATPREMLEDHDLL
Ga0070688_10043570423300005365Switchgrass RhizosphereARMSEEPLQSMLAKAVETLRGATDLTMDEIIGLRALPPTVHTPENCYSLGIIEGAAAALRSTPREMLEDHDLLIAPKRS*
Ga0070709_1173465813300005434Corn, Switchgrass And Miscanthus RhizosphereVTRACYVATMSDEALRAMLVTAVEQLRAATDLTMREVIGVSALPESVRTPEVCYSLGVIAGAAAALRGTRHELLDELDLLLASKRP*
Ga0070701_1045750123300005438Corn, Switchgrass And Miscanthus RhizosphereVQHLGRWSPARFDVIVWHMSDERLRLMLMKAVAQLRAATELTMDEVIGILTIPDAALTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAPKRS*
Ga0070708_10080709923300005445Corn, Switchgrass And Miscanthus RhizosphereMSDEPLRLMLAKAVQLLRGATDLTMDEVIGLRALPESVRTPDVCYSLGVIEGAAAALRATPREMLEDHDLLTAPKR*
Ga0070708_10113049613300005445Corn, Switchgrass And Miscanthus RhizosphereMSDELLLKMLTTAVEHLRGATDLTMDEIIGLRRLPETARTPDVCYSLGIIEGAATALRATPREMLEDHDLLIAPV
Ga0070678_100001447143300005456Miscanthus RhizosphereMSEDRLRLMLLKAVEQLRAATELTMDEVIGIRALPETARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAQKRP*
Ga0070685_1026731323300005466Switchgrass RhizosphereMTDDALRTMIAKAVEQLRAATDLTMTEVIGVSALPPDTRTPEVCYALGVLEGAATALRATRQELLDDLDLLTAPRRTPQA*
Ga0070685_1079285313300005466Switchgrass RhizosphereMSDEPLRDLLTNAVAQLRAATDLTMDEVIGIRALPESVRTPDVGYALGVIHGAAAALRATPRE
Ga0070706_10007612843300005467Corn, Switchgrass And Miscanthus RhizosphereMSDELLLKMLTTAVEHLRGATDLTMDEIIGLRRLPETARTPDVCYSLGIIEGAATALRATPREMLEDHDLLIAPVRT*
Ga0070707_10166939423300005468Corn, Switchgrass And Miscanthus RhizosphereMSDEALQSILAKAVDQLRVATDLTMHEVIGLVDLKRLPESARTPDVCYSLGIIAGAAAALRATPREMLEDHELLIAPKR*
Ga0070698_100003337113300005471Corn, Switchgrass And Miscanthus RhizosphereMSDEPLRIMLTKAVDELRATTDLTMDEVLGLRTLPENRRTPLVCYSLGVIEGAATALRATPREMLEDFDLLTAPKRT*
Ga0070698_10030001923300005471Corn, Switchgrass And Miscanthus RhizosphereMGDEPLRLMLVKAVAQLRAATDLTMEEVIGVSALPESARTPDVCYSLGIIEGAATALHATPREMLEDHDLLIAPKRE*
Ga0070699_10061139223300005518Corn, Switchgrass And Miscanthus RhizosphereMGDDRLRTMLVKAVEQLRGATDLTMNEVIGIRVLPDSARTPEVCYSLGIIEGAATALRATPREMLEDHDLWIAPKRS*
Ga0070697_10077640013300005536Corn, Switchgrass And Miscanthus RhizosphereMSDEPLRLMLIKAVAQLRAATELTMDEVIGIRAIPDATRTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAPKRS*
Ga0070704_10052897023300005549Corn, Switchgrass And Miscanthus RhizosphereMGDEPLRLMLVKAVAQLRAATDLTMEEVIGVSALPESARTPDVCYSLGIIEGAATALRATPREMLEDHDLLIAPKRE*
Ga0068857_10036492523300005577Corn RhizosphereMSDEPLRDLLTNAVAQLRTATDLTMDEVIGIRALPESVRTPDVGYALGVIHGAAAALRATPREMLEDHDLLTAPKRT*
Ga0068857_10203602523300005577Corn RhizosphereEPLRTLVTNAVAHLRAATDLTMDEVIGIRVLPDAARTPDVCYALGVIHGAAAALRATPREMLEDLDLLTAPKRT*
Ga0070702_10178084113300005615Corn, Switchgrass And Miscanthus RhizosphereMSDEPLRLMLIKAVAQLRAATELTMDEVIGIRAIPDATRTPEVCYSLGIIEGAATALRATPREMLEDHDLL
Ga0074470_1071440323300005836Sediment (Intertidal)MSDVPLRSMLTKAVEILRTATDLTMDEIIGIRELPPAALTPEVCHALGVVEGAATALRMTRRELLEDLDLLTAARREPAPTPSA*
Ga0074470_1129693923300005836Sediment (Intertidal)MPEEPLHVMLSTAVDQLRGTDLTMDELIGFRALPESVRTPDVCYALGVIMGAAAASRATPRELLEDHDLLTAPPRN*
Ga0068863_10138174323300005841Switchgrass RhizosphereMSDEPLRSLVTNAVAQLRAATDLTMDEVIGIRALPESARTPDVAYSLGVIHGAAAALRATPREMLEDLDLLTAPKRT*
Ga0068860_10031869823300005843Switchgrass RhizosphereMSDEPLRLMLIKAVAQLRAATELTMDEVIGIRAIPDTTRTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAPKRS*
Ga0075152_1040927133300005986Wastewater EffluentMSDEPLRAMLTLAVAQLRAATDLTMDEIIGLPSLPEDARTPEVSHALGIIEGAAAALRATRRELLEDHDLLTAPKRPA*
Ga0075160_1038837023300005988Wastewater EffluentMSDLALRALLSTAVEQLRDATDLTTDEVIGLRALPPALLTPDVCYSLGVIKGAAAALRLTQREMLEEFDLLTAPRRSA*
Ga0070717_1000231443300006028Corn, Switchgrass And Miscanthus RhizosphereMSDDALRTMIAKAVDQLRAATDLTMTEVIGVSALPPDTRTPEVCYALGVLEGAATALRATRQELLDDLDLLTAPRRTPEA*
Ga0070717_1167088613300006028Corn, Switchgrass And Miscanthus RhizosphereAKAVDQLRAATDLTMTEVIGVSALPPDTRTPEVCYALGVLEGAATALRATRQELLDDLDLLTAPRRTPEA*
Ga0066652_10115525023300006046SoilMSDDALRLLLTTAVAQLRTATDLTIDEVIGLRILQLEGLRTLPESALTPEVCYSLGVIEGAASALRSTPREILHDHGLLTTPAR*
Ga0075163_1111927523300006056Wastewater EffluentMTDHALRAMLAKAVEQLRLATDLTTDETIGLAALPESLRTPDTCFSLGVIEGAAAALRLTRREMLEELDLLTAPRRPA*
Ga0070716_10145087723300006173Corn, Switchgrass And Miscanthus RhizosphereRTLVTNAVAQLRAATDLTMDEVIGIRVLPEGSRTHDVCYALGVIHGAAAALRATPREMLEDLDLLTAPKRT*
Ga0097621_10051046223300006237Miscanthus RhizosphereMSDEALRAMIVTAVAQLRASTDLTMREIIGVSSLPESARTPEVCYSLGVIAGAAAALRGTRHELLDELDLLLAPKRS*
Ga0068871_10125547833300006358Miscanthus RhizosphereLRLMLLKAVEQLRAATELTMDEVIGIRALPETARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAQKRP*
Ga0075421_10178040813300006845Populus RhizosphereMSDEALRLLLTTAVEQLRGATDLTMDEIIGLRRLPESTRTPEVCYSLGVIEGAAAALRATPRELLEDHDLLTAPKRV*
Ga0075431_10116190813300006847Populus RhizosphereMSDEPLRQMLTKAVEQLRGATELTMDEIIGLRALPPTARTPEDCYSLGIIEGAAAALRATPRELLEDHDLLTAKQRHTPDA*
Ga0075425_10123109023300006854Populus RhizosphereMSDELLRLMLVKAVEQLRAATELTMDEVIGISRLPDAARTPEVCYSLGIIEGAATALGATPREILEDHDLLTAPKRS*
Ga0075425_10140861023300006854Populus RhizosphereMGDDRLRAMLVKAVEELREATDLTMNEVIGIRVLPDSARTPEVCYSLGIIEGAATALRATPREMLEDHDLWIAPKRS*
Ga0075429_10013589223300006880Populus RhizosphereMGDERMRAMLVGAVDVLRTATDLTMDEVIGIRALPETVRTPDVCYALGVIVGAATALRSTPRELLADHDLLIAPKRTT*
Ga0075429_10020214133300006880Populus RhizosphereMSDELLLSMLTKAVEQLRGATDLTMDEIIGLRALPESARTPETCYSLGVIEGAACALRATRREMLEDHDLLTAAKRS*
Ga0075429_10191000213300006880Populus RhizosphereMLRFPMSDEPLQIMLTKAVEQLRAATDLTMDEVIGLQTLPDSARTPDVCYSLGVIQGAATALRATPRELLEDHDLLTAPKRA*
Ga0079215_1142114613300006894Agricultural SoilMLSAAGTAYGLTMSDEALRAMLMQAVDQLRGATDLTMTEIIGLSALPPSVRTPEVCYSLGVLEGAAAALRATRHEMLDELDLLIKPKHLT*
Ga0075424_10253989823300006904Populus RhizosphereMSDEPLRNLLTNAVAQLRAATDLTMDEVIGIRALPEAARTADVGYALGIIHGAAAALRATPREMLEDHDLLIAPK
Ga0079303_1006337713300006930Deep SubsurfaceMLTKAVEQLRGATELTMDEIIGLRALPQSARTPEDCYSLGVIEGAAAALRATPRELLEDYDLLTAKRAAP*
Ga0079303_1017490623300006930Deep SubsurfaceMSDEPLRLMLTKAVEQLRGTTELTMDEIIGLRALPQSARTPEDCYSLGVIEGAAAALRATPRELLEDYDLLTAIKRE*
Ga0075435_10103147123300007076Populus RhizosphereMSDEPLRSMLTKAVEQLRGATDLTMDEIIGLRALPESARTPETCYSLGVIEGAACALRATRREMLEDHDLLTAAKRS*
Ga0105044_1022232123300007521FreshwaterMPDQALRSVLAKAVEQLRSATDLTTDEVIGLGQLPDAMRTPHVCYSLGLIEGAATALRLTRREMLEELDLLTAPRRSE*
Ga0102851_1097213123300009091Freshwater WetlandsMSEEPLRSMLTKAVEQLRGATELTMDEIIGLRALPQSARTPEDCYSLGVIEGAAAALRATPRELLEDYDLLTAKRAAP*
Ga0111539_1317098123300009094Populus RhizosphereMSDEPLRNLLTNAVAQLRAATDLTMDEVIGIRALPESVRTPDVGYALGVIHGAAAALRATPREMLEDHDLLTAPKRT*
Ga0105245_10000107673300009098Miscanthus RhizosphereMGDDALRRVLAEAVELLRAATELTMDEVIGVRAIRALPETARTPEVCYALGVIEGAASALRATPRELLEDHDLLTAAKAG*
Ga0115026_1003579623300009111WetlandMSEEPLRSMLTKAVEQLRGATELTMDEIIGLRALPQSARTPEDCYSLGVIEGAAAALRATPRALLEDYDLLTAKRAAP*
Ga0099792_1081369123300009143Vadose Zone SoilCVHAWYHVQMPDDALRLMIAKAVLQLRMATDLTMSEIIGISALPETARTPEVCYSLGVLEGAAVALRATRQEMLEDLDLLTAPRRQPQA*
Ga0113563_1003642523300009167Freshwater WetlandsMSDDALRSMLANAVETLRAATDLTMDEIIGIKALPESTRTPEVCYALGVLEGAATALRATRVEMLEDFELLTAAKRR*
Ga0105248_1069653623300009177Switchgrass RhizosphereMSDEPLRDLLTNAVAQLRTATDLTMDEVIGIRALPESVRTPDVGYALGVIHGAAAALRATPREMLEDLDLLTAPKRT*
Ga0073899_1004217963300009540Activated SludgeMGEQRLRVMLTKAVEQLRAATELTMDEVIGISALPESARTPDVCYSLGIIEGAATALRATPREMLEDHDLLTAPKRA*
Ga0131092_100006701023300009870Activated SludgeMSDLALRALLSTAVEQLRDATDLTTDEVIGLRALPPALVTPDVCYSLGVIKGAAAALRLTQREMLEEFDLLTAPRRSA*
Ga0131092_1099832923300009870Activated SludgeMLTKAVEQLRAATELTMHEVVGLRVLPDDARTPEVCYALGIIEGAATARHATPGEMLEDFDLLTAPKRS*
Ga0131077_1002832473300009873WastewaterMSDEPLRAMLSRAVDQLRAATELTMHEVVGLRALPDEARSPEVCYALGIIEGAATARHATPRELLEDFDLLTTPRRS*
Ga0127449_101411313300010117Grasslands SoilMSDEPLRNLITNAVAHLRAATDLTMDEVIGIRALPESVRTPDVGYALGVIHGAAAALRATPREMLEDLDL
Ga0134125_1189141513300010371Terrestrial SoilMADDALRQVLVTAVAQLRAATELTMDEVIGVRAIRALPEAARTPEVCYALGVIEGAATALRATPREMLEDHDLLTAAKGA
Ga0134121_1005160123300010401Terrestrial SoilMPDDALRLMIAKAVHQLRMATDLTMTEIIGISALPETARTPDVCYSLGVLDGAAAALRATRQEMLEDFDLLTAPRR*
Ga0126359_145251613300010869Boreal Forest SoilMAEDELRMMIAKAVQQLRTATDLTMTEIIGISALPETARTPDVCYSLGVLEGAATALRATRQELLDELDLLTAPRRPTEA*
Ga0127502_1017241123300011333SoilMSDEPLRDLLINAVAQLRAATDLTMDEVIGISALPDSVRTPDVGYALGVIHGAAAALRATPREMLEDLDLLTAPKRS*
Ga0137438_100514923300011431SoilMTEDALRTMIAKAVHQLRMATDLTMSEIIGVSALPSAARTPEVCFSLGVLEGAATALGATRQEMLDDLDLLTAPRRQPQA*
Ga0137451_100702323300011438SoilMSDEALRTMIAKAVQQLRTATDLTMTEIIGVSALPEAARTPEVCYSLGVLEGAAAALRATPQEMLEELDLLTAPRRQPQA*
Ga0137463_104433023300011444SoilMSDDQLRVMLVKAVGILREATDLTMDEVIGISALPESTRTPEVCYSLGVLEGAATALRCTRVELLEDHDLLTAAKRI*
Ga0150985_10029397813300012212Avena Fatua RhizosphereMSEEPLRTLLAQAVETLRGATDLTMDEIIGLRALPPTVHTPENCYSLGIIEGAAAALRSTPREVLEDHDLLTAAKR*
Ga0134028_128226813300012224Grasslands SoilMSDEALRILVTDAVAQLRTATDLTMDEVIGIRALPDSVRTPDVCYALGVIHGAAAALRATPREMLDDLDLLIAAKR*
Ga0134049_107232913300012403Grasslands SoilMSDEALRILVTDAVAQLRTATDLTMDEVIGIRALPDSVRTPDVCYALGVIHGAAAALRATPREMP
Ga0150984_10847018623300012469Avena Fatua RhizosphereRTLLAQAVETLRGATDLTMDEIIGLRALPPTVHTPENCYSLGIIEGAAAALRSTPREVLEDHDLLTAAKR*
Ga0157284_1004972013300012893SoilMSDEVLRAMLMQAIDQLRGATDLTMTEIIGLSALPRSVRTPEVCYSLGVIDGAAAALRATRHEMLDDLDLLIKPKHLT*
Ga0157283_1034562513300012907SoilMSDEPLRDLLTNAVAQLRAATDLTMEEVIGISALPESVRTPDVAYALGAIHGAAAALRATPREMLEDHDLLTAPKRT*
Ga0137404_1033828713300012929Vadose Zone SoilMPDDALRMMIAKAVHQLRMATDLTMTEIIGISALPETARTPDVCYSLGVLEGAAAALRATRQEMLEDFDLLTAPRR*
Ga0153915_1004527633300012931Freshwater WetlandsMSDVALQEMLTKAVEHLRSATDLTMDEIIGLQALPESARTPDVCYALGVVEGAAAALRATPRELLEDHDLLTAPKRS*
Ga0153915_1063462443300012931Freshwater WetlandsMSDEALRVMLMKAVEQLRGATDLTMDEIIGLRALPESARTPEVCYSLGVIEGAAAALRATRREMLEDHELLTAAKRA*
Ga0164241_1013204413300012943SoilVNANILEQLRAATELTMDEVIGIRVLPDAACTREVCYSLGIIEGAATALRATPRELLEDHDLLTAPKRS*
Ga0164241_1027420413300012943SoilMKAVEQLRAATDLTMDEVIGIRRLPDSARTPEVCYSLGVIEGAATALRATPRELLEDHDLLTAPKRS*
Ga0154020_1087534323300012956Active SludgeMSDQALRALLSTAVEQLRDATDLTTDEVIGLAALPPTMLTPDVCYSLGLLKGAAAALRLTQREMLEELELLTAPRRQA*
Ga0164301_1152170013300012960SoilMSDEALHVMLSKAVEQLRGATDLTMDEIIGLRALPESARTPEICYSLGIIEGAAAALRATRREMLEDHDLLTAAKRV*
Ga0157378_1123425023300013297Miscanthus RhizosphereMGDDALRRVLAEAVELLRAATEVTMDEVIGVRAIRALPETARTPELCYALGVIEGAASALRATPRELLEDHDLLTAAKAG*
Ga0075355_105223133300014322Natural And Restored WetlandsMPDDAFRLMLAKAVEQLRDATDLTMDEIIGLRALPESARTPEGCYSLGVIEGAAAALRATRRELLEEHDLLTAAKRA*
Ga0163163_1059806523300014325Switchgrass RhizosphereMSDDALRTLVTNAVAQLRAATDLTMDEVIGIRVLPEGSRTHDVCYSLGVIHGAAAALRATPREMLEDLDLLTAPKRT*
Ga0157380_1238658013300014326Switchgrass RhizosphereMSGEPLRAMLTKAVEHLRGSTDLTMDEIIGLRALPSTTRSPEACYSLGVIEGAAAALRATPREMLEDHDLLTAAKRP*
Ga0157376_1019991123300014969Miscanthus RhizosphereMGDDALRLVLVEAVELLRAATELTMDEVIGVRAIRALPETARTPEVCYALGVIEGAASALRATPRELLEDHDLLTAAKAG*
Ga0163161_1072611123300017792Switchgrass RhizosphereMPDDALRLMIAKAVHQLRMATDLTMTEIIGISALPEVARTPDVCYSLGVLEGAAAALRATRQEMLEDFDLLTAPRR
Ga0187778_1110621613300017961Tropical PeatlandMSDEALRTMIVAAVAQLRASTDLTMSEIIGVSALPESTRTPEVCYSLGVIAGAAAALRATRHELLDELDLLLAPVRG
Ga0187776_1129807013300017966Tropical PeatlandMSDEALRAMIVTAVAQLRASTDLTMSEIIGVSVLPEAARTPDVCYSLGVIAGAAAALRATRHELLDELDLLLAPERG
Ga0190275_1247872223300018432SoilMSDEPQLRVMLSKAVELLRGATDLTMDEVIGLRALPESVRTPDVCYSLGVIEGAAAASRATPRELLEDHDLLTAAKRT
Ga0190269_1034171913300018465SoilMSDEALRVLLTKAVEQLRDTDLTMDELIGLRALPDSARTPENCYSLGVIEGAAAAMRATPRELLEDHDLLTAAKRG
Ga0193712_109049023300019880SoilMIARAVDQLRTATDLTMSEIIGVSALPTTARTPEVCFSLGVLEGAATALGATRQEMLDDLDLLTAPRRRPQA
Ga0193728_100223163300019890SoilMLACGMSEEPLRLVLVEAVEQLRAATDLTMDEVIGIRALRALPAAARTPEVCYALGIIEGAAAALRATPREMLEDHDLLTAVKGA
Ga0196981_100591123300021057SoilMIACRMSDEALRTILAKAVEQLRAATDLTMHEVVGLRALPEPARTPEVCYSLGLIEGAALARHATPAEMLEDFELLTAPKR
(restricted) Ga0224723_113822133300021517Freshwater SedimentLLTNAVARLRAETDLTMDEVIGLRALPESVRTPDVSYALGVIHGAAAALRATPREMLEDFDLLTAPKRT
Ga0247746_108782823300022886SoilMSDEVLRAMLMQAIDQLRGATDLTMTEIIGLSALPRSVRTPEVCYSLGVIDGAAAALRATRHEMLDDLDLLIKPKHLT
Ga0124853_115711333300024056Freshwater WetlandsMLTKAVEQLRGATELTMDEIIGLRALPQSARTPEDCYSLGVIEGAAAALRATPRELLEDYDLLTAKRAAP
Ga0247669_101469523300024182SoilMSDDALQIILTKAVADLRAATELTMDEVIGLRRLPEATRTPDVCYALGVIEGAATALRATPREMLEDHDLLTAPVRT
Ga0179589_1052213313300024288Vadose Zone SoilMSDDALRSMIAKAVHQLRMATDLTMTEIIGISALPETARTPEVCYSLGVLEGAATALRATRQEMLEDFDLLTAPRR
Ga0208460_1026636613300025877Anaerobic Digestor SludgeSTAVEQLRDATDLTTDEVIGLRALPPALLTPDVCYSLGVIKGAAAALRLTQREMLEEFDLLTAPRRSA
Ga0207705_1091536513300025909Corn RhizosphereKAVEQLRTATELTMDEVIGIRALPESARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAQKRP
Ga0207684_1017297023300025910Corn, Switchgrass And Miscanthus RhizosphereMSDELLLKMLTTAVEHLRGATDLTMDEIIGLRRLPETARTPDVCYSLGIIEGAATALRATPREMLEDHDLLIAPVRT
Ga0207707_1049128223300025912Corn RhizosphereMGDDALRLVLAEAVELLRAATELTMDEVIGVRAIRALPEAARTPEVCYALGVIEGAAAALRATPREMLEDHELLTAAKGG
Ga0207662_1007461623300025918Switchgrass RhizosphereMSDDALRTMIAKAVEQLRAATDLTMTEVIGVSALPPDTRTPEVCYALGVLEGAATALRATRQELLDDLDLLTAPRRTPEA
Ga0207662_1096290623300025918Switchgrass RhizosphereVQHLGRWSPARFDVIVWHMSDERLRLMLMKAVAQLRAATELTMDEVIGILTIPDAARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAPKRS
Ga0207662_1104884823300025918Switchgrass RhizosphereMSDEPLRLMLIKAVAQLRAATELTMDEVIGIRAIPDATRTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAPKRS
Ga0207646_1135061823300025922Corn, Switchgrass And Miscanthus RhizosphereMSDEALQSILAKAVDQLRVATDLTMHEVIGLVDLKRLPESARTPDVCYSLGIIAGAAAALRATPREMLEDHELLIAPKR
Ga0207687_1000111393300025927Miscanthus RhizosphereMGDDALRRVLAEAVELLRAATELTMDEVIGVRAIRALPETARTPEVCYALGVIEGAASALRATPRELLEDHDLLTAAKAG
Ga0207706_1078461733300025933Corn RhizosphereCRAAYGLGMSDEALRAMLTQAIDQLRGATDLTMTEIIGLSALPPSVRTPEVCYSLGVLDGAAAASRATRHEMLDELDLLIKPKPLT
Ga0207670_1002633563300025936Switchgrass RhizosphereMSDEPLRDLLTNAVAQLRTATDLTMDEVIGIRALPESVRTPDVGYALGVIHGAAAALRATPREMLEDHDLLTAPKRT
Ga0207670_1097359713300025936Switchgrass RhizosphereMSDEPLRDLLTNAVAQLRAATDLTMEEVIGISALPESVRTPDVAYALGAIHGAAAALRATPREMLEDHDLLTAPKRT
Ga0207670_1181910313300025936Switchgrass RhizosphereMPDDALRLMIAKAVHQLRMATDLTMTEIIGISALPETARTPDVCYSLGVLEGAAAALGATRQEMLEDFDLLTAP
Ga0207669_1063694123300025937Miscanthus RhizosphereMSEDRLRLMLLKAVEQLRAATELTMDEVIGIRALPETARTPEVCYSLGIIEGAATALRATPREMLEDHDLLI
Ga0207689_1166617323300025942Miscanthus RhizosphereFMLVKAVEQLRAATDLTMDEVIGIRALPETARTPDVCYSLGIIEGAATALHATPREMLQDHDLLIAPKRS
Ga0207668_1025881223300025972Switchgrass RhizosphereMPEDALHTMIAKAVHQLRVATDLTMTEIIGISALPESARTPDVCHSLGVLEGAAAALRATRQEMLEDFDLLTAPQRQPSV
Ga0207703_1217214113300026035Switchgrass RhizosphereMSDEPLRLMLIKAVAQLRAATELTMDEVIGIQTIPDSARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAPKRS
Ga0207674_1025143333300026116Corn RhizosphereMSDEPLRLMLIKAVAQLRAATELTMDEVIGIRAIPDTTRTPEVCYSLGIIEGAATALRATPREMLEDHELLTAAKGG
Ga0207683_10002375133300026121Miscanthus RhizosphereMSEDRLRLMLLKAVEQLRAATELTMDEVIGIRALPETARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAQKRP
Ga0207683_1023885123300026121Miscanthus RhizosphereMSEDRLRIMLLKAVEQLRTATELTMDEVIGIRALPESARTPEVCYSLGIIEGAATALRATPREMLEDHDLLIAQKRP
Ga0207856_100213173300026983Tropical Forest SoilMSDEALRAMLTQAIDQLRGATDLTMTEIIGLSALPPSVRTPEVCYSLGVLDGAAAASRATRHEMLDELDLLIKPKHLT
Ga0209175_1019118313300027781Wastewater EffluentMSDLALRALLSTAVEQLRDATDLTTDEVIGLRALPPALLTPDVCYSLGVIKGAAAALRLTQREMLEEFDLLTAPRRSA
Ga0209174_1033779613300027789Wastewater EffluentMSDLALRALLSTAVEQLRDATDLTTDEVIGLRALPPALLTPDVCYSLGVIKGAAAALRLTQREMLEEFD
Ga0209798_1052115223300027843Wetland SedimentMSDDALRLMLTTAVEQLRGATDLTMHEIIGLRALPESARTPEVCYSLGIIEGAAAALRATPKEMLEDHDLLTAAKRTS
Ga0209591_10000195633300027850FreshwaterMPDQALRSVLAKAVEQLRSATDLTTDEVIGLGQLPDAMRTPHVCYSLGLIEGAATALRLTRREMLEELDLLTAPRRSE
Ga0209481_1002857833300027880Populus RhizosphereMGDERMRAMLVGAVDVLRTATDLTMDEVIGIRALPETVRTPDVCYALGVIVGAATALRSTPRELLADHDLLIAPKRTT
Ga0268266_1093297123300028379Switchgrass RhizosphereMSDDALRTMIAKAVEQLRAATDLTMTEVIGVSALPPDTRTPEVCYALGVLEGAATALRATRQELLDDLDLLTAPRRAPEA
Ga0268266_1148727023300028379Switchgrass RhizosphereMSDERLRLMLEKAVEQLRAATELTMDEVIGLRALPEATRTPDVCYSLGIIEGAATALRATPREMLEDHDLLTAPKRS
Ga0307503_1071734023300028802SoilRPKRDRPGAPVAGVLGCGMSDDALRIMLTKAVEQLRAATDLTMDEVIGISRLPDSARTPDVCYSLGVIEGAATALRATPREMLEDHDLLTAPKRA
Ga0307296_1071919323300028819SoilMSDERLRQMLVKAVEQLRAATELTMDEVIGISALPDSARTPEVCYSLGIIEGAATAMRATPREMLEDHDLLTAPKRP
Ga0311347_1094297223300029923FenMSDQGIRQLISTAVQQLRAATDLTMSEIIGISALPESARTPEVCHALGILEGAAAAMRVTRQELLDDLDLLTAPRRTPQA
Ga0311337_1142439923300030000FenMAEDALHQVIAKAVEQLRAATDLTMTEIIDVPVLPETARTSDVCYSLGVLQGAAIALGATRQEMLEELDLLTAP
Ga0302299_1032982223300030010FenMAEDALHQVIAKAVEQLRAATDLTMTEIIDVPVLPETARTSDVCYSLGVLQGAAIALGATRQEMLEELDLLTAPPS
Ga0302299_1055723023300030010FenMSDEALHAMLSLAVAQLRAATDLTMDEIIGLPSLPEDARTPEVSHALGIIEGAAAALRATRREMLEDHDLLTAPKRPA
Ga0299915_10000032623300030613SoilMDAPLRDMLIKAVEILREATDLTMDEVIGIRALPESTRTPEVCYALGVLEGAAVALRSTKREMLEDHDLLTAAKR
Ga0302323_10083278713300031232FenMIATAVEQLRAATDLTMTEIIGVSALPAAARTPEVCFSLGVLEGAAAALGSTRQEMLDDLDLLTAPRRQPPA
Ga0307508_1001371653300031616EctomycorrhizaVLAFVMAEDELRTMIAKAVHQLRMATDLTMTEIIGISALPEVARTPEVCFSLGVLEGAAAALRATRQEMLDDFDLLTAPRRPRPA
Ga0307508_1015384633300031616EctomycorrhizaMSEDALRTMIAKAVEQLRMATDLTMSEIIGVSALPATARTPEVCYSLGVLEGAATALGATRQEMLDDLDLLTAPRRQPQA
Ga0265314_1023764023300031711RhizosphereMADDALRLVLVEAVELLRAATELTMDEVIGVRAIRALPETARTPEVCYALGVIEGAASALRATPRELLEDHDLLTAAKAV
Ga0307469_1138159323300031720Hardwood Forest SoilMSDEPLRNLVTSAVAQLRAATDLTMDEVVGIRALPESVRTPDVAYALGVIHGAAAALRATPREMLED
Ga0302322_10380480013300031902FenTSRAGSNNGGRVPSMSDESIREMLAKAVAILREATDLTMDEVIGIKALPESTRTPEVCYSLGVLEGAATALRATRRELLEDHDLLTAEKRT
Ga0308175_100000239183300031938SoilMIAKAVHQLRMATDLTMTEIIGISALPETARTPEVCYSLGVLEGAAAALRATRQEMLEDFDLLTAPRR
Ga0308176_1179318323300031996SoilMADDALRQVLVEAVALLRAATELTMDEVIGVRAIRALPEAARTPEVCYALGVIEGAASALRATPREMLEDHDLLTAAKGA
Ga0307411_1233818423300032005RhizosphereMSDESLQNMLTKAVEHLRIATDLTMDEVIGLRSLPESARTPDVCYALGVIEGAATALRATPRELLEDHNLLTAPKRA
Ga0310890_1085635713300032075SoilMSDDALQVMLTKAVQQLRAATELTMDEVIGISALPDSARTPEVCYSLGIIEGAATALRATPREMLEDHDLLTAPKRT
Ga0315912_1001497253300032157SoilMSDEPLRNLLTNAVAQLRAATDLTMDEVIGIRALPESVRTPDVAYALGVIHGAAAALRATPREMLEDLDLLTAPKRS
Ga0315912_1072607713300032157SoilMTDEPLRRMLTKAVEQLRAATDLTMDEVIGIRALPDSARTPDVCYSLGIIEGAATALHATPREMLEDHDLLTAPKRD
Ga0315912_1083514043300032157SoilMSEEPLLGLVTRAVAQLRAATDLTMDEVIGIRALPESVRTPDVGYALGIIHGAAAALRATPRE
Ga0335078_1246880823300032805SoilVLACRMSDEALRAMIVTAVTQLRASTDLTMSEIIGVGALPESARTPEVCYSLGVIAGAAAALRGTRHELLDELDLLLAPKRG
Ga0335081_1243955313300032892SoilMSDEALRAMIVTAVAQLRASTDLTMSEIIGVSALPESARTPEVCYSLGVIAGAAAALRGTQHELLDELDLLLAPKRG
Ga0335069_1068610213300032893SoilMSDEALRLMLEKAVEQLRAATELTMDEVIGIRALPAAVRTPDVCYSLGIIEGAATALRSTPREMLEDIDLLTAPKRSGSTP
Ga0307507_1003514843300033179EctomycorrhizaVLAFMMAEDELRTMIAKAVHQLRMATDLTMTEIIGISALPEAARTPEVCFSLGVLEGAAAALRATRQEMLDDFDLLTAPRRPPAGVTVT
Ga0316605_1024292633300033408SoilMSDEPLRLMLTKAVEQLRGTTELTMDEIIGLRALPQSARTPEDCYSLGVIEGAAAALRATPRELLEDYDLLTAIKRE
Ga0316603_1000690423300033413SoilMSDDALRSMLANAVETLRAATDLTMDEIIGIKALPESTRTPEVCYALGVLEGAATALRATRVEMLEDFELLTAAKRR
Ga0316603_1021739633300033413SoilMLTKAVEQLRGTTELTMDEIIGLRALPQSARTPEDCYSLGVIEGAAAALRATPRELLEDYDLLTAIKRE
Ga0316620_1166967723300033480SoilVTNAVAQLRAATDLTMDEVIGIRALPDAVRTPDVGYALGVIHGAAAALRATPREMLEDLDLLTAPART
Ga0316624_1073723423300033486SoilMSDDPLRPLVTKAVALLRAATDLTMDEVIGIGALPEAVRTPDVAYALGVIHGAAAALRATPREMLEDLDLLTAPKRT
Ga0299912_1054330213300033489SoilMDAPLRDMLIKAVALLREATDLTMDEVIGIRALPESTRTPEVCYALGVLEGAAVALRSTKREMLEDHDLLTAAKR
Ga0316628_10000560493300033513SoilMSEDRLRIMLVKAVEQLRAATELTMDEVIGIRALPDSARTPDVCYSLGIIEGAATALRATPRELLEDHDLLTAPESP
Ga0316628_10267780213300033513SoilLACRMSDDALQLMLVKAVAQLRAATDLTMDEVIGIRALPDSARTPDVCYSLGIIEGAATALRATPREMLEDHDLLTAPKRS


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