Metagenome / Metatranscriptome Family F033529

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033529
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	47 residues
Representative Sequence	LITTITRVTRILVLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Number of Associated Samples	109
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.27 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	70.62 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.927 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.294 % of family members)
Environment Ontology (ENVO)	Unclassified (46.328 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.271 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.23% β-sheet: 0.00% Coil/Unstructured: 41.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF03466	LysR_substrate	6.21
PF01738	DLH	3.95
PF02321	OEP	3.39
PF14125	DUF4292	2.82
PF00106	adh_short	2.26
PF00581	Rhodanese	2.26
PF13561	adh_short_C2	1.69
PF07690	MFS_1	1.13
PF14361	RsbRD_N	1.13
PF07638	Sigma70_ECF	1.13
PF00158	Sigma54_activat	1.13
PF09335	SNARE_assoc	1.13
PF02954	HTH_8	1.13
PF13620	CarboxypepD_reg	1.13
PF08281	Sigma70_r4_2	1.13
PF00561	Abhydrolase_1	0.56
PF03061	4HBT	0.56
PF13185	GAF_2	0.56
PF13365	Trypsin_2	0.56
PF12867	DinB_2	0.56
PF13442	Cytochrome_CBB3	0.56
PF07813	LTXXQ	0.56
PF04073	tRNA_edit	0.56
PF08386	Abhydrolase_4	0.56
PF13505	OMP_b-brl	0.56
PF13374	TPR_10	0.56
PF02518	HATPase_c	0.56
PF17131	LolA_like	0.56
PF13533	Biotin_lipoyl_2	0.56
PF00166	Cpn10	0.56
PF03888	MucB_RseB	0.56
PF03446	NAD_binding_2	0.56
PF13581	HATPase_c_2	0.56
PF00378	ECH_1	0.56
PF02457	DAC	0.56
PF08818	DUF1801	0.56
PF13186	SPASM	0.56
PF00440	TetR_N	0.56
PF05977	MFS_3	0.56
PF07617	DUF1579	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	6.78
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.26
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.13
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.13
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.13
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.13
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.56
COG3026	RseB, negative regulator of sigma E activity	Signal transduction mechanisms [T]	0.56
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.56
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.93 %
Unclassified	root	N/A	31.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.93 %
Unclassified	root	N/A	31.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.93 %
Unclassified	root	N/A	31.07 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.37 %
Unclassified	root	N/A	31.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.99 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.21 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.21 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.21 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.56 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.56 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.56 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.56 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.56 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.56 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01BEAD0	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300001084\|JGI12648J13191_1002111	Not Available	2265	Open in IMG/M
3300001175\|JGI12649J13570_1011200	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300001471\|JGI12712J15308_10002132	All Organisms → cellular organisms → Bacteria → Acidobacteria	5925	Open in IMG/M
3300001471\|JGI12712J15308_10026568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1501	Open in IMG/M
3300001471\|JGI12712J15308_10065847	Not Available	917	Open in IMG/M
3300001546\|JGI12659J15293_10000447	All Organisms → cellular organisms → Bacteria	13316	Open in IMG/M
3300001546\|JGI12659J15293_10129566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300001593\|JGI12635J15846_10140418	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300001593\|JGI12635J15846_10223338	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300001593\|JGI12635J15846_10248389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300002245\|JGIcombinedJ26739_100470699	Not Available	1134	Open in IMG/M
3300002245\|JGIcombinedJ26739_100561169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1019	Open in IMG/M
3300002245\|JGIcombinedJ26739_101583805	Not Available	552	Open in IMG/M
3300004082\|Ga0062384_100051129	Not Available	2001	Open in IMG/M
3300004635\|Ga0062388_100069985	All Organisms → cellular organisms → Bacteria	2387	Open in IMG/M
3300005534\|Ga0070735_10261785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300005538\|Ga0070731_10810694	Not Available	621	Open in IMG/M
3300005542\|Ga0070732_10085149	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300005542\|Ga0070732_10333292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300005542\|Ga0070732_10352375	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005542\|Ga0070732_10736170	Not Available	601	Open in IMG/M
3300005557\|Ga0066704_10182939	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300005591\|Ga0070761_10288291	Not Available	986	Open in IMG/M
3300005591\|Ga0070761_10513737	Not Available	740	Open in IMG/M
3300005591\|Ga0070761_11050502	Not Available	518	Open in IMG/M
3300005602\|Ga0070762_10025014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3149	Open in IMG/M
3300005602\|Ga0070762_10033204	All Organisms → cellular organisms → Bacteria	2773	Open in IMG/M
3300005602\|Ga0070762_10250054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300005602\|Ga0070762_10667740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300005610\|Ga0070763_10649101	Not Available	615	Open in IMG/M
3300005921\|Ga0070766_10127660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1535	Open in IMG/M
3300005921\|Ga0070766_10245636	Not Available	1134	Open in IMG/M
3300005921\|Ga0070766_10280694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300005921\|Ga0070766_10454486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300006176\|Ga0070765_100040653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3720	Open in IMG/M
3300006176\|Ga0070765_100280741	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300006176\|Ga0070765_101486901	Not Available	638	Open in IMG/M
3300006893\|Ga0073928_10000507	All Organisms → cellular organisms → Bacteria	91274	Open in IMG/M
3300006893\|Ga0073928_10085472	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300006893\|Ga0073928_10268023	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300009038\|Ga0099829_10008872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6401	Open in IMG/M
3300009633\|Ga0116129_1020031	All Organisms → cellular organisms → Bacteria	2357	Open in IMG/M
3300010343\|Ga0074044_11122585	Not Available	514	Open in IMG/M
3300012189\|Ga0137388_10001463	All Organisms → cellular organisms → Bacteria → Acidobacteria	14353	Open in IMG/M
3300012362\|Ga0137361_11344087	Not Available	638	Open in IMG/M
3300012685\|Ga0137397_11149107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012925\|Ga0137419_11550371	Not Available	562	Open in IMG/M
3300012927\|Ga0137416_10133256	Not Available	1921	Open in IMG/M
3300014489\|Ga0182018_10069607	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300014489\|Ga0182018_10355014	Not Available	789	Open in IMG/M
3300014489\|Ga0182018_10404508	Not Available	730	Open in IMG/M
3300014501\|Ga0182024_11984892	Not Available	644	Open in IMG/M
3300018009\|Ga0187884_10331076	Not Available	615	Open in IMG/M
3300018025\|Ga0187885_10331579	Not Available	686	Open in IMG/M
3300018034\|Ga0187863_10848084	Not Available	519	Open in IMG/M
3300018042\|Ga0187871_10020529	All Organisms → cellular organisms → Bacteria → Acidobacteria	4278	Open in IMG/M
3300020579\|Ga0210407_10444461	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300020579\|Ga0210407_10617303	Not Available	844	Open in IMG/M
3300020581\|Ga0210399_10025294	All Organisms → cellular organisms → Bacteria	4718	Open in IMG/M
3300020581\|Ga0210399_10082916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2607	Open in IMG/M
3300020582\|Ga0210395_10220923	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300020582\|Ga0210395_10422759	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300020582\|Ga0210395_11228508	Not Available	550	Open in IMG/M
3300020583\|Ga0210401_10019556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6513	Open in IMG/M
3300020583\|Ga0210401_10828297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300021088\|Ga0210404_10183913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300021168\|Ga0210406_10999659	Not Available	622	Open in IMG/M
3300021171\|Ga0210405_10045740	All Organisms → cellular organisms → Bacteria	3472	Open in IMG/M
3300021171\|Ga0210405_10978626	Not Available	639	Open in IMG/M
3300021178\|Ga0210408_10000457	All Organisms → cellular organisms → Bacteria	52587	Open in IMG/M
3300021178\|Ga0210408_11297854	Not Available	552	Open in IMG/M
3300021180\|Ga0210396_10142539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2155	Open in IMG/M
3300021181\|Ga0210388_10075890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	2843	Open in IMG/M
3300021181\|Ga0210388_11053119	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300021181\|Ga0210388_11294783	Not Available	615	Open in IMG/M
3300021401\|Ga0210393_10130166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	2016	Open in IMG/M
3300021402\|Ga0210385_10649270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300021404\|Ga0210389_10284284	Not Available	1296	Open in IMG/M
3300021404\|Ga0210389_10318799	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300021404\|Ga0210389_10866151	Not Available	704	Open in IMG/M
3300021407\|Ga0210383_10408519	Not Available	1171	Open in IMG/M
3300021407\|Ga0210383_10410002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300021420\|Ga0210394_10075836	All Organisms → cellular organisms → Bacteria	2908	Open in IMG/M
3300021420\|Ga0210394_11216983	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300021432\|Ga0210384_10020029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6463	Open in IMG/M
3300021432\|Ga0210384_10878241	Not Available	796	Open in IMG/M
3300021433\|Ga0210391_10014581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6348	Open in IMG/M
3300021433\|Ga0210391_10051647	All Organisms → cellular organisms → Bacteria	3270	Open in IMG/M
3300021433\|Ga0210391_10337563	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300021433\|Ga0210391_10362968	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300021474\|Ga0210390_10040384	All Organisms → cellular organisms → Bacteria → Acidobacteria	3814	Open in IMG/M
3300021477\|Ga0210398_11213075	Not Available	596	Open in IMG/M
3300021478\|Ga0210402_11544204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300021559\|Ga0210409_10198963	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300021559\|Ga0210409_11267901	Not Available	613	Open in IMG/M
3300022557\|Ga0212123_10001856	All Organisms → cellular organisms → Bacteria → Acidobacteria	55162	Open in IMG/M
3300022557\|Ga0212123_10012471	All Organisms → cellular organisms → Bacteria → Acidobacteria	11379	Open in IMG/M
3300022713\|Ga0242677_1091510	Not Available	503	Open in IMG/M
3300022724\|Ga0242665_10366735	Not Available	519	Open in IMG/M
3300024227\|Ga0228598_1005435	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300025320\|Ga0209171_10200976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300025612\|Ga0208691_1024453	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300026446\|Ga0257178_1017020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300026551\|Ga0209648_10342886	Not Available	1034	Open in IMG/M
3300027370\|Ga0209010_1046746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300027545\|Ga0209008_1069561	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	794	Open in IMG/M
3300027567\|Ga0209115_1027214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300027575\|Ga0209525_1156974	Not Available	518	Open in IMG/M
3300027590\|Ga0209116_1114974	Not Available	590	Open in IMG/M
3300027609\|Ga0209221_1000417	All Organisms → cellular organisms → Bacteria	18379	Open in IMG/M
3300027629\|Ga0209422_1033897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300027648\|Ga0209420_1000445	All Organisms → cellular organisms → Bacteria	22336	Open in IMG/M
3300027648\|Ga0209420_1023802	All Organisms → cellular organisms → Bacteria → Acidobacteria	1960	Open in IMG/M
3300027648\|Ga0209420_1041881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1399	Open in IMG/M
3300027648\|Ga0209420_1094701	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300027692\|Ga0209530_1004778	All Organisms → cellular organisms → Bacteria → Acidobacteria	4563	Open in IMG/M
3300027692\|Ga0209530_1058024	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300027729\|Ga0209248_10088220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300027737\|Ga0209038_10070951	Not Available	1045	Open in IMG/M
3300027767\|Ga0209655_10003359	All Organisms → cellular organisms → Bacteria → Acidobacteria	5618	Open in IMG/M
3300027767\|Ga0209655_10308835	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300027768\|Ga0209772_10026259	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300027842\|Ga0209580_10076170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1598	Open in IMG/M
3300027846\|Ga0209180_10548131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300027853\|Ga0209274_10338188	Not Available	775	Open in IMG/M
3300027857\|Ga0209166_10000045	All Organisms → cellular organisms → Bacteria	168255	Open in IMG/M
3300027884\|Ga0209275_10054201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1938	Open in IMG/M
3300027889\|Ga0209380_10284087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300027895\|Ga0209624_10082301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2086	Open in IMG/M
3300027895\|Ga0209624_10111315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1793	Open in IMG/M
3300027895\|Ga0209624_10349771	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300027895\|Ga0209624_10573699	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300027908\|Ga0209006_10000185	All Organisms → cellular organisms → Bacteria	65363	Open in IMG/M
3300027908\|Ga0209006_10000654	All Organisms → cellular organisms → Bacteria → Acidobacteria	32296	Open in IMG/M
3300027908\|Ga0209006_10024460	All Organisms → cellular organisms → Bacteria → Acidobacteria	5469	Open in IMG/M
3300027908\|Ga0209006_10108794	All Organisms → cellular organisms → Bacteria	2454	Open in IMG/M
3300027908\|Ga0209006_10539872	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300027908\|Ga0209006_10846646	Not Available	738	Open in IMG/M
3300027986\|Ga0209168_10016810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4200	Open in IMG/M
3300027986\|Ga0209168_10580202	Not Available	537	Open in IMG/M
3300028536\|Ga0137415_10869935	Not Available	711	Open in IMG/M
3300028747\|Ga0302219_10145347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300028863\|Ga0302218_10324819	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300028906\|Ga0308309_10245450	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300028906\|Ga0308309_10883075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300029910\|Ga0311369_11462015	Not Available	514	Open in IMG/M
3300029944\|Ga0311352_10647706	Not Available	839	Open in IMG/M
3300029944\|Ga0311352_11400828	Not Available	525	Open in IMG/M
3300030054\|Ga0302182_10310362	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300030503\|Ga0311370_11293069	Not Available	781	Open in IMG/M
3300030580\|Ga0311355_10150088	All Organisms → cellular organisms → Bacteria	2507	Open in IMG/M
3300030815\|Ga0265746_1015224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300030848\|Ga0075388_11473650	Not Available	667	Open in IMG/M
3300031231\|Ga0170824_121583354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300031525\|Ga0302326_10151106	All Organisms → cellular organisms → Bacteria → Acidobacteria	3994	Open in IMG/M
3300031663\|Ga0307484_114706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300031708\|Ga0310686_109349841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300031708\|Ga0310686_119643713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2671	Open in IMG/M
3300031715\|Ga0307476_10364382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300031718\|Ga0307474_11379942	Not Available	556	Open in IMG/M
3300031720\|Ga0307469_10312109	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300031753\|Ga0307477_10111971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1900	Open in IMG/M
3300031754\|Ga0307475_10703603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300031754\|Ga0307475_11001139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300031823\|Ga0307478_10000011	All Organisms → cellular organisms → Bacteria → Acidobacteria	301539	Open in IMG/M
3300031823\|Ga0307478_10257574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1419	Open in IMG/M
3300031823\|Ga0307478_10998102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300031823\|Ga0307478_11139164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	650	Open in IMG/M
3300031962\|Ga0307479_10117972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2586	Open in IMG/M
3300031962\|Ga0307479_10195495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1992	Open in IMG/M
3300033829\|Ga0334854_049627	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300034163\|Ga0370515_0006412	All Organisms → cellular organisms → Bacteria	5708	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.44%
Host-Associated	Host-Associated	0.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.14%
Aquatic	Environmental → Aquatic	11.30%
Plants	Host-Associated → Plants	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.49%
Freshwater	Environmental → Aquatic → Freshwater	7.91%
Peat	Environmental → Terrestrial → Peat	5.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.33%
Loam	Environmental → Terrestrial → Soil → Loam	32.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	32.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	21.47%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.34%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.08%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.56%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_339910	2032320005	Soil	LITTITRVTRILVLAVFFVAVVDFSLDSARFDLVVMTAALALFISGGLWSH
JGI12648J13191_10021114	3300001084	Forest Soil	LITTITRLTRILVLALFLIYAVDFSLDTAWFDLVIMTAALVIVISGGLRRP*
JGI12649J13570_10112001	3300001175	Forest Soil	VLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRNP*
JGI12712J15308_100021328	3300001471	Forest Soil	MATTTTVVRILVLALFFVSVADFSLESAQFDLVVMTAALAIFFSGGLRSP*
JGI12712J15308_100265682	3300001471	Forest Soil	VPETKHIKRILVLALLFASVVDFILDSARFDLVVMIAALAIFLSGGLRSP*
JGI12712J15308_100658472	3300001471	Forest Soil	MRILVLALFFASVVDFSLDSARFDLVVMTAALAIFLSSGLRSP*
JGI12659J15293_100004475	3300001546	Forest Soil	MITRVARILVLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP*
JGI12659J15293_101295662	3300001546	Forest Soil	MRILVLALFFISVVDFSLDSAQFDLVVMTAAVAIFLSGGLRSP*
JGI12635J15846_101404181	3300001593	Forest Soil	VLALFFVSVVDFSLDSVRFDLVVMTAALAIFLSGGLQNP*
JGI12635J15846_102233383	3300001593	Forest Soil	WACLDRGLELITTITRVTRIPVPALLIVSVVDFSLDSARFDLVVISAALAIFLSGGLRAS
JGI12635J15846_102483893	3300001593	Forest Soil	MATTTSAVRILVLALFFASVADFSLESAQFDLVVMTAALAIFFSGGLRSP*
JGIcombinedJ26739_1004706991	3300002245	Forest Soil	LITTIRRVIRILVAALFFVSVVDFSLDNARFDLVVMTAALAIFLSGGLRSP*
JGIcombinedJ26739_1005611691	3300002245	Forest Soil	LIATTTRVVRILVLALFFVSVADFSLESAQFDLVVMTAALAIFFSGGLR
JGIcombinedJ26739_1015838051	3300002245	Forest Soil	LITTTTRVTRILVLALFFVSVVDFSLDSARFDLVVMTAALAIFFSGGLRNP*
Ga0062384_1000511292	3300004082	Bog Forest Soil	MITKVTQILVLALLFVSIVDFSLDNAGFDLVVITAALAIFFSGGLRGP*
Ga0062388_1000699852	3300004635	Bog Forest Soil	LITMITKVTQILVLALLFVSIVDFSLDNAGFDLVVITAALAIFFSGGLRGP*
Ga0070735_102617852	3300005534	Surface Soil	LITTITRVTRILVVALFFVSVMDFGLDSAGYDLVVMTAGLAIFFSGGLRRL*
Ga0070731_108106942	3300005538	Surface Soil	RVTRILVVALFFVSVMDFGLDSAGYDLVVMTAGLAIFFSGGLRRL*
Ga0070732_100851493	3300005542	Surface Soil	MARVTRILGLALFFASVADFSLDSARFDLVVMTAALAIFLSGGLRSP*
Ga0070732_103332922	3300005542	Surface Soil	LITTITRVTRILVLALFFVAVVDFSLDSARFDLVVMTAAVALFISGGLRSH*
Ga0070732_103523752	3300005542	Surface Soil	LITTITRVTRVLVLALLLASVVDFSLDNARFDLVVMTAALVIFLSGGLRSP*
Ga0070732_107361701	3300005542	Surface Soil	LITTITRATRILVLTLLFICVVVFSLDSVRFDLVVVTAALA
Ga0066704_101829393	3300005557	Soil	VTRIPLLALFFVSVVEFILENARIDLELMTAALVILLWGRLRSP*
Ga0070761_102882912	3300005591	Soil	LIITITRVTRIPLLALFFVSVVDFILDSERIDLVLMTAALAILFLGGMRRP*
Ga0070761_105137372	3300005591	Soil	MRILVFALLFVSVVDFSLDSAAFDLVAIAAALTIFLSGGLRNP*
Ga0070761_110505021	3300005591	Soil	ELITTITRVMRILVLALLFASVVDFSLDSARFDLVVMTAALAIFFSGGLRSP*
Ga0070762_100250142	3300005602	Soil	VLALFFVSVVDFSLDSARFDLVVMTAALAIFFSGGLRSP*
Ga0070762_100332044	3300005602	Soil	VLALLFACIADFSLDNARFDLVVITAALAILLSGGLQSP*
Ga0070762_102500543	3300005602	Soil	SHLGQKLELVTELITTITRVMRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGAVRRS*
Ga0070762_106677401	3300005602	Soil	VLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRRP*
Ga0070763_106491011	3300005610	Soil	LITTITRVIRILVLALLFVSVLDFSLDSARFDLVFMTAALVIFLSGGLRSP*
Ga0070766_101276603	3300005921	Soil	VLALFFVSVVDFSLDSAQFDLVVMTAALAIFLSGGLRSP*
Ga0070766_102456361	3300005921	Soil	DSRHSPCSLGLELITTITRLARILVLALFFVSGVDFSLDSARFDLVVMTAALVIVISGGLRSP*
Ga0070766_102806942	3300005921	Soil	MRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGGLRRS*
Ga0070766_104544861	3300005921	Soil	TTITRVTRILVLALFFVSAVDTSLDSVRFDLVVMIAALAILLSGGLRNP*
Ga0070765_1000406532	3300006176	Soil	VLITTITRVTRILVLALLLASVVNFSLDSARFDLVVMTAALAIFLSGGLRSP*
Ga0070765_1002807413	3300006176	Soil	VLALFFVSVVDFSLDSAQFDLVVMTAALAIFLSGGLRRP*
Ga0070765_1014869011	3300006176	Soil	VLITTITRVTRILVLALFFVSAVDTSLDSVRFDLVVIIAALAILLSGGLRNP*
Ga0073928_100005071	3300006893	Iron-Sulfur Acid Spring	LLALLFVSVADFSLDSARFDLVVMTAALAIFLSGGLRSP*
Ga0073928_100854725	3300006893	Iron-Sulfur Acid Spring	DSELCLDRRLELITTITRVTRIFLLALFFVSLVHFSLDSARFDLVVMTAALAIFFSGGLRSP*
Ga0073928_102680233	3300006893	Iron-Sulfur Acid Spring	SELCLDRRLELITTITRVTRILVLALFFVSVVDFSLDSAQFDLVVMTAALAIFLSGGLRSP*
Ga0099829_100088723	3300009038	Vadose Zone Soil	VTRIPLLALFFVAAVDFSLDKARIDLVLMTAALAILLWGGLRSP*
Ga0099830_101027742	3300009088	Vadose Zone Soil	VTRIPLLALFFVAAVDFSLDKARIDLVLMTAALAILLWGGVRSP*
Ga0116129_10200314	3300009633	Peatland	MARSESCFDGRLELITTITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAILFSGGLRSP*
Ga0074044_111225851	3300010343	Bog Forest Soil	RVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRNP*
Ga0137388_100014636	3300012189	Vadose Zone Soil	VTRIPLLALFFVAAVDFSLDKARIDLVLMTAALTILLWGGLRSP*
Ga0137361_113440872	3300012362	Vadose Zone Soil	FVSAADFSLDSARIDPVLMIVALAILLWGGLWSP*
Ga0137397_111491072	3300012685	Vadose Zone Soil	LITTITRVTRILVLALFFVAVVDFSLDSARFDLVVMTAALAIFISGGLRSP*
Ga0137419_115503711	3300012925	Vadose Zone Soil	IELITTITRVTRIPLLALFFVSAVDFSLDSARIDLALMTAALAILLWGGLRSP*
Ga0137416_101332563	3300012927	Vadose Zone Soil	ITTITRVTRIPLLALFFVSAVDFSLDSARIDLALMTAALAILLWGGLRSP*
Ga0182018_100696074	3300014489	Palsa	MRILVLALFFASIADFSLDSARCDLVVMTAALAILLSAGLRKS*
Ga0182018_103550141	3300014489	Palsa	DSESCLDRKLELVTELITTITRVMRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGGLRRS*
Ga0182018_104045082	3300014489	Palsa	TMITRVARILVLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP*
Ga0182024_119848921	3300014501	Permafrost	VLALFFVSVVDFSLDSVRFDLVVMTAALAIFLSGGLRNP*
Ga0187884_103310762	3300018009	Peatland	LITTITRVMRILVFALLFVSVVDFSLDSAAFDLVAIAAALTIFLSGGLRNP
Ga0187885_103315792	3300018025	Peatland	LITTITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRNP
Ga0187863_108480841	3300018034	Peatland	LITTITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIYLSGGLRNP
Ga0187871_100205296	3300018042	Peatland	VLALLFVSVVDFSLDSARFDLVVMTAALAIYLSGGLRNP
Ga0210407_104444612	3300020579	Soil	TRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSS
Ga0210407_106173033	3300020579	Soil	MRILLLVLFFVSVVDFSLDSARFDLVVMTAALAIFLSSGLRSP
Ga0210399_100252945	3300020581	Soil	VLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0210399_100829162	3300020581	Soil	VLALFFVSVVDFSLDSAQFDLVVMTAALAIFLSGGLRSP
Ga0210395_102209231	3300020582	Soil	ILVFALLLASVVNVSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0210395_104227593	3300020582	Soil	LITTITRVIRILVLALLFVSVLDFSLDSARFDLVFMTAALVIFL
Ga0210395_112285081	3300020582	Soil	LITRITRVTRILVLALFCVAVVDFSLDNARFDLVVMTAALTLLISGGLRSH
Ga0210401_100195566	3300020583	Soil	VLALFFVSVVDFGLDSAGFDLVVMTAGLAIFFSGGLRSP
Ga0210401_108282972	3300020583	Soil	MTRVTRIPLLALFFLSVVDFSLDNARIDLLVMTAALAMLLWGGLRKP
Ga0210404_101839131	3300021088	Soil	LITTITKVIQILVLALLVVSAVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0210406_109996591	3300021168	Soil	VLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRRP
Ga0210405_100457406	3300021171	Soil	TKITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFSSGGLRSS
Ga0210405_109786261	3300021171	Soil	LITKITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGL
Ga0210408_100004579	3300021178	Soil	VFALLLASVVNVSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0210408_112978541	3300021178	Soil	MTMITRVTRILVLALLFASAVDFSLDSARFDLVVVTAALAIFLSGGLRSP
Ga0210396_101425393	3300021180	Soil	VLDRRLELIITATKITRILVLALLLASVVNSSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0210388_100758903	3300021181	Soil	MTGVTRIPLLALFFLSVMDFSLDSARIDLLVMTAALAMLLWGGLRKP
Ga0210388_110531192	3300021181	Soil	RIQNTVSDLRHLVRRLELIATITRLTRILMLALFFVSLADFSLDSARFDLVVMAAALAILLSSGLRSP
Ga0210388_112947832	3300021181	Soil	MTTIARVMRILVLALFFVSVVDFSLDSAQFDLVVMVAALAIVFSGGL
Ga0210393_101301663	3300021401	Soil	VLALLLASVVDFSLDSARFDLLVVTAALAIFLPGGL
Ga0210385_106492702	3300021402	Soil	MTTIARVMRILVLALFFVSVVDFSLDSAQFDLVVMVAALAIVFSGGLRSP
Ga0210389_102842841	3300021404	Soil	FFLSLVDFSLDNARLDLLVMTAALAMLLWGGLRKP
Ga0210389_103187992	3300021404	Soil	VIRTISRVTRIPLLALFFVTVVDFALDSARIDLVLMSAALAILFWGGMRRP
Ga0210389_108661511	3300021404	Soil	ALLFASVADFSLDSARYDLVVMTAALTIFLSGGLRTP
Ga0210383_104085192	3300021407	Soil	MLALFFVSLADFSLDSARFDLVVMAAALAILLSSGLRSP
Ga0210383_104100021	3300021407	Soil	MATTTTVVRILVLALFFVSVADFSLESAQFDLVVMTAALAIFFSGGLRSP
Ga0210394_100758361	3300021420	Soil	VLALFFVSVVDFSLDSAQFDLVVMTAALAIFLSGGLRRP
Ga0210394_112169832	3300021420	Soil	LELIATITRLTRILMLALFFVSLADFSLDSARFDLVVMAAALAILLSSGLRSP
Ga0210384_100200297	3300021432	Soil	MITRVTRILVLALLFASAVDFSLDSARFDLVVVTAALAIFLSGGLRSP
Ga0210384_108782412	3300021432	Soil	MITRLTRILVLALFFVSVVDFSLDSAGFDLVVMTGALAIVLSGGLRSH
Ga0210391_100145817	3300021433	Soil	VLALFFVSVVDFSLDSARFDLVVMTAALAIFFSGGLRSP
Ga0210391_100516472	3300021433	Soil	VLALFFVSGVDFSLDSARFDLVVMTAALVIVISGGLRSP
Ga0210391_103375631	3300021433	Soil	VLALLFVSVVDFSLDSAQFDLVVMTAALAIFLSGGLRTP
Ga0210391_103629683	3300021433	Soil	LDRGLELITTITRVTRIPVPALLFVSVVDFSLDSARFDLVVITAALAIFLSGGLRTS
Ga0210390_100403844	3300021474	Soil	VLITTITRVTRILVLALLFVSVVDFSLDSARFDLVVITGALAIYLSGGLRNP
Ga0210398_112130751	3300021477	Soil	LITTITRVTRILVLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0210402_115442041	3300021478	Soil	MIAMITRVKRIPLLALFFVSVLDFALESARIDLVVMVGAVTILLWGGLRKP
Ga0210409_101989633	3300021559	Soil	MTMITRVKRILVLELLFAYAVDFSLDSARFDLVVVTAALAIFLSGGLRSP
Ga0210409_112679011	3300021559	Soil	LITTITRATRILVFTLLSICVVVFSLDSVRFDLVVVTAALAIFFSGGLRSP
Ga0212123_1000185611	3300022557	Iron-Sulfur Acid Spring	LLALLFVSVADFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0212123_100124715	3300022557	Iron-Sulfur Acid Spring	MTRVTRIPLLALFFLSVVDFSLDNARIDLLVMTAALVMLLWGGLRKP
Ga0242677_10915102	3300022713	Soil	ALFFLSVMDFSLDSARIDLLVMTAALAMLLWGGLRKP
Ga0242665_103667352	3300022724	Soil	ALLLASVVNSSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0228598_10054351	3300024227	Rhizosphere	VLALLFACIADFSLDNARFDLVVITAALAILLSGGL
Ga0209171_102009761	3300025320	Iron-Sulfur Acid Spring	LITKITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0208691_10244531	3300025612	Peatland	MRILVFALLFVSVVDFSLDSAAFDLVAIAAALTIFLSGGLRNP
Ga0257178_10170201	3300026446	Soil	VTRIPLLALFFVAAVDFSLDKARIDLVLMTAALTILLWGGLRSP
Ga0209648_103428862	3300026551	Grasslands Soil	VLALFFVAVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0209010_10467462	3300027370	Forest Soil	MRVTRIVVLALFFVSVVDFSLDSARFDLVVMIAALAIFFSGGVHSS
Ga0209008_10695611	3300027545	Forest Soil	MITRVARILVLALFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0209008_10820422	3300027545	Forest Soil	RLELITTMTRVTRIPLLALFFLSVVDFSLDNARIDLLVMTAALAMLLWGGLRKP
Ga0209115_10272142	3300027567	Forest Soil	MTRVTRIPLLALFFLSVMDFSLDSARIDILVMTAALAMLLWGGLRKP
Ga0209525_11569741	3300027575	Forest Soil	VLITTITRVPRIPVLALFFVSAVDFSLDSARFDLVVMTAALAIFLSGGLRTP
Ga0209116_11149741	3300027590	Forest Soil	TTITRLTQILVLALFLIYAVDFSLDSAWFDLVVMTAALVIVISGGLRSP
Ga0209221_100041716	3300027609	Forest Soil	VFALLFVSVVDFSLDSAAFDLVAIAAALTIFLSGGLRNP
Ga0209422_10338973	3300027629	Forest Soil	VLALFFVSVLDFSLDSARFDLVVMTAALAIYLSGGLRNP
Ga0209420_100044522	3300027648	Forest Soil	VLALFLIYAVDFSLDTAWFDLVIMTAALVIVISGGLRRP
Ga0209420_10238021	3300027648	Forest Soil	VLALFFVSVVDFSLDSVRFDLVVMTAALAIFLSGG
Ga0209420_10418812	3300027648	Forest Soil	VLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRNP
Ga0209420_10947012	3300027648	Forest Soil	LRLDRRLELITTIMRVTRIVVLALFFVSVVDFSLDSARFDLVVMIAALAIFFSGGVHSS
Ga0209530_10047785	3300027692	Forest Soil	ITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRNP
Ga0209530_10580242	3300027692	Forest Soil	VLALFFVSVVDFSLDSVRFDLVVMTAALAIFLSGGLQNP
Ga0209248_100882201	3300027729	Bog Forest Soil	LITTITRVTRILVLALLFVSVVDFSLDSARFDLVVITAALAIYLSGGLRNP
Ga0209038_100299943	3300027737	Bog Forest Soil	FAGYSKSKCNRLSRESQGKGRDAESCLDRRLELITTITRVTRILLLALLLASVVNFRLDSARFDVVVVTAALAIFLSGGLRSP
Ga0209038_100709512	3300027737	Bog Forest Soil	VLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRTP
Ga0209655_100033595	3300027767	Bog Forest Soil	VLAMLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRNP
Ga0209655_103088351	3300027767	Bog Forest Soil	ESCLDRRLELITMITKVTQILVLALLFVSIVDFSLDNAGFDLVVITAALAIFFSGGLRGP
Ga0209772_100262591	3300027768	Bog Forest Soil	LITTITRVTRILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRTP
Ga0209580_100761702	3300027842	Surface Soil	MARVTRILGLALFFASVADFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0209180_105481311	3300027846	Vadose Zone Soil	LIAIITRVTRIPLLALFFVAAVDFSLDKARIDLVLMTAALTIL
Ga0209274_103381881	3300027853	Soil	AIEPCLDRRVVLITTITRVTRILVLALLFVSVVDFSLDSARFDLVVITGALAIYLSGGLRNP
Ga0209166_1000004556	3300027857	Surface Soil	VLALLLASIVDFSLDNARFDLVVMTAALVIFISGGLRSP
Ga0209275_100542014	3300027884	Soil	SHLGQKLELVTELITTITRVMRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGAVRRS
Ga0209380_102840872	3300027889	Soil	MRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGGLRRS
Ga0209624_100823014	3300027895	Forest Soil	VLALFFISVVDFSLDSAQFDLVVMTAAVAIFLSGGLRSP
Ga0209624_101113152	3300027895	Forest Soil	VPRPETELITTTTRVTRILVLALFFVSVVDFSLDSARFDLVVMTAALAIFFSGGLRSP
Ga0209624_103497713	3300027895	Forest Soil	MTRVTRIPLLALFFVSVVDFSLDNARIDLLVMTAALAMLLWGGLRKP
Ga0209624_105736992	3300027895	Forest Soil	LDRRLELITTIRRVIRILVAALFFVSVVDFSLDNARFDLVVITAALAILLSGGLQSP
Ga0209006_1000018523	3300027908	Forest Soil	VLALLFACIADFSLDNARFDLVVITAALAILLSGGLQSP
Ga0209006_1000065423	3300027908	Forest Soil	MRILVLALFFASVVDFSLDSARFDLVVMTAALAIFLSSGLRSP
Ga0209006_100244604	3300027908	Forest Soil	VPETKHIKRILVLALLFASVVDFILDSARFDLVVMIAALAIFLSGGLRSP
Ga0209006_101087943	3300027908	Forest Soil	VLALFFVSAVDFSLDSARFDLVVMTAALAIFLSGGLRTP
Ga0209006_105398721	3300027908	Forest Soil	ELITTITRVTRILVLALFFVSVVDFSLDSAQFDLVVMTAALAIFLSGGLRSP
Ga0209006_106455982	3300027908	Forest Soil	SQGNGRGSESRLDRRLELITTITRVTRILVLALLFASLVDFSLDSALFDLVVMTGALAIFLSGGLRSP
Ga0209006_108466461	3300027908	Forest Soil	VIRILVAALFFVSVVDFSLDNARFDLVVMTAALAIFLSGGLRSP
Ga0209168_100168105	3300027986	Surface Soil	MARVTRILVLALFFASVADFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0209168_105802022	3300027986	Surface Soil	LITTITRVTRILVVALFFVSVMDFGLDSAGYDLVVMTAGLAIFFSGGLRRL
Ga0137415_108699352	3300028536	Vadose Zone Soil	IELITTITRVTRIPLLALFFVSAVDFSLDSARIDLALMTAALAILLWGGLRSP
Ga0302219_101453471	3300028747	Palsa	ELEWVTELITTITRVMRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGGLRRS
Ga0302218_103248191	3300028863	Palsa	ALFFASIADFSLDSARCDLVVMTAAVAILLSGGLRRS
Ga0308309_102454501	3300028906	Soil	CLDRRLELITTIARVTRILVLALFASVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0308309_108830751	3300028906	Soil	KWRDSESHLGQKLELVTELITTITRVMRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGAVRRS
Ga0311369_114620152	3300029910	Palsa	VLALFFVSIVDFSLDSARFDLVVMTAALAIFFSGGLRSP
Ga0311352_106477062	3300029944	Palsa	SESCPDRRPELIITITRVTRGLVLALFFVSIVDFSLDSARFDLVVMTAALAIFFSGGLRS
Ga0311352_114008281	3300029944	Palsa	PELEWVTELITTITRVMRILVLALFFASIADFSLDSARCDLVVMTTTLAILLSAGLRKS
Ga0302182_103103621	3300030054	Palsa	HAKWRDSESCLDRKLELVTELITTITRVIRILVLALFFASIADFSLDSARCDLVVMTAAVAILLSGGLRRS
Ga0311370_112930692	3300030503	Palsa	LIITITRVTRGLVLALFFVSIVDFSLDSARFDLVVMTAALAIFFSGGLRS
Ga0311355_101500881	3300030580	Palsa	DRRPELIITITRVTRGLVLALFFVSIVDFSLDSARFDLVVMTAALAIYLSGGLRNP
Ga0265746_10152241	3300030815	Soil	MATTTTVVRILVLALFFVSVADFSLESAQFDLVVMAAALAIFFSGGLRSP
Ga0075388_114736501	3300030848	Soil	LITTITRVTRILVLALFFVAVVDFSLDSARFDLVVMTAALALFISGGLRSH
Ga0170824_1215833543	3300031231	Forest Soil	LKTTITTVTRILVLALFFVSVVDFCLDSAGFDLVVMTAALAIFFSGALLSH
Ga0302326_101511065	3300031525	Palsa	MRILVLALFFASIADFSLDSARCDLVVMTTTLAILLSAGLRKS
Ga0307484_1147062	3300031663	Hardwood Forest Soil	LITTITRVIRILVLALLFVSVLDFSLDSARFDLVFMTAALVIFLSGGLR
Ga0310686_1093498412	3300031708	Soil	MATTTSAVRILVLALFFVSVADFSLESAQFDLVVMTAALAIFFSGGLRSP
Ga0310686_1196437134	3300031708	Soil	LLALLFVSVADFSLDSVRFDLVVMTAALAIFLSGGLRSP
Ga0307476_103643822	3300031715	Hardwood Forest Soil	MTRVARIPLLALFFLSVVDFSLDNARFDLLVMTAALAMLLWGGLRKP
Ga0307474_113799422	3300031718	Hardwood Forest Soil	VSALRHLVRRLELIATITRVTRILVLALFFVSIVDFSLDSAGFDLVVMTGALAIVLSGGLRSH
Ga0307469_103121091	3300031720	Hardwood Forest Soil	AITRVTRIPLLALFFVSAVDFSLDSARIDLVLMTAAVAILLWGGLRSP
Ga0307477_101119712	3300031753	Hardwood Forest Soil	VFALLLASVVNVSLDSARFDLVVVTAALAIFLSGGLRSP
Ga0307475_107036032	3300031754	Hardwood Forest Soil	LITTITRVTRILVLALFFVAVVDFSLDSARFDLVVMTAALALFVSGGLRCH
Ga0307475_110011392	3300031754	Hardwood Forest Soil	VEVIRTISRVTRIPLLALFFFSVVDFALDSARIDLVLMSAALAILFWGGMRRP
Ga0307478_10000011212	3300031823	Hardwood Forest Soil	LTRATRILALALFFVSVVDFGLDSARFDLVVMTAAVAIFFSGGLRSP
Ga0307478_102575741	3300031823	Hardwood Forest Soil	ILVLTLLFICVVVFSLDSVRFDLVVVTAALAIFFTGGLRSP
Ga0307478_109981022	3300031823	Hardwood Forest Soil	MTRVTRIPLLALFFLSLVDFSLDNARLDLLVMTAALAMLLWGG
Ga0307478_111391641	3300031823	Hardwood Forest Soil	MTTITRVTRIPLLALFFVSVVDFSLDRTRIDLVLMTGALAILLWGGLRKP
Ga0307479_101179723	3300031962	Hardwood Forest Soil	VFALLLASVVNVSLDSVRFDLVVMTAALAIFLSGGLRSP
Ga0307479_101954952	3300031962	Hardwood Forest Soil	LITTITKVIQILVLALLFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRSP
Ga0334854_049627_14_127	3300033829	Soil	VLFFVSVVDFSLDSARFDLVVMTAALAIFLSGGLRNP
Ga0370515_0006412_2138_2257	3300034163	Untreated Peat Soil	VLALFFVAVMDFSLDSAQFDFVVMTAALTIFLSGGLRSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033529

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences