Basic Information | |
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Family ID | F033476 |
Family Type | Metagenome |
Number of Sequences | 177 |
Average Sequence Length | 54 residues |
Representative Sequence | MFPYRLFSHDGFGNFSLIQEFAAPNDEAAALFVGRWRVRPLELWQATRKVKFWA |
Number of Associated Samples | 116 |
Number of Associated Scaffolds | 177 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 76.84 % |
% of genes near scaffold ends (potentially truncated) | 37.29 % |
% of genes from short scaffolds (< 2000 bps) | 81.36 % |
Associated GOLD sequencing projects | 97 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.68 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (87.571 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (16.384 % of family members) |
Environment Ontology (ENVO) | Unclassified (71.186 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (63.277 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.98% β-sheet: 34.15% Coil/Unstructured: 54.88% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.68 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 177 Family Scaffolds |
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PF00487 | FA_desaturase | 9.04 |
PF02913 | FAD-oxidase_C | 7.34 |
PF01176 | eIF-1a | 4.52 |
PF00313 | CSD | 2.26 |
PF09351 | DUF1993 | 1.69 |
PF02786 | CPSase_L_D2 | 1.13 |
PF03720 | UDPG_MGDP_dh_C | 1.13 |
PF13147 | Obsolete Pfam Family | 1.13 |
PF02785 | Biotin_carb_C | 1.13 |
PF00990 | GGDEF | 1.13 |
PF00675 | Peptidase_M16 | 1.13 |
PF08031 | BBE | 1.13 |
PF12680 | SnoaL_2 | 1.13 |
PF01427 | Peptidase_M15 | 0.56 |
PF00226 | DnaJ | 0.56 |
PF00298 | Ribosomal_L11 | 0.56 |
PF10067 | DUF2306 | 0.56 |
PF10503 | Esterase_PHB | 0.56 |
PF08448 | PAS_4 | 0.56 |
PF00154 | RecA | 0.56 |
PF00871 | Acetate_kinase | 0.56 |
PF05221 | AdoHcyase | 0.56 |
PF07676 | PD40 | 0.56 |
PF14534 | DUF4440 | 0.56 |
PF00986 | DNA_gyraseB_C | 0.56 |
PF04402 | SIMPL | 0.56 |
PF03466 | LysR_substrate | 0.56 |
PF12833 | HTH_18 | 0.56 |
PF13628 | DUF4142 | 0.56 |
PF12706 | Lactamase_B_2 | 0.56 |
PF09722 | Xre_MbcA_ParS_C | 0.56 |
PF13507 | GATase_5 | 0.56 |
PF08557 | Lipid_DES | 0.56 |
PF13545 | HTH_Crp_2 | 0.56 |
PF01738 | DLH | 0.56 |
PF01042 | Ribonuc_L-PSP | 0.56 |
PF00351 | Biopterin_H | 0.56 |
PF13410 | GST_C_2 | 0.56 |
PF01979 | Amidohydro_1 | 0.56 |
PF01329 | Pterin_4a | 0.56 |
PF05690 | ThiG | 0.56 |
PF03462 | PCRF | 0.56 |
PF08811 | DUF1800 | 0.56 |
PF00989 | PAS | 0.56 |
PF00106 | adh_short | 0.56 |
COG ID | Name | Functional Category | % Frequency in 177 Family Scaffolds |
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COG3239 | Fatty acid desaturase | Lipid transport and metabolism [I] | 9.04 |
COG1398 | Fatty-acid desaturase | Lipid transport and metabolism [I] | 9.04 |
COG0277 | FAD/FMN-containing lactate dehydrogenase/glycolate oxidase | Energy production and conversion [C] | 8.47 |
COG0361 | Translation initiation factor IF-1 | Translation, ribosomal structure and biogenesis [J] | 4.52 |
COG5267 | Uncharacterized conserved protein, DUF1800 family | Function unknown [S] | 0.56 |
COG0080 | Ribosomal protein L11 | Translation, ribosomal structure and biogenesis [J] | 0.56 |
COG3471 | Predicted secreted (periplasmic) protein | Function unknown [S] | 0.56 |
COG3426 | Butyrate kinase | Energy production and conversion [C] | 0.56 |
COG3186 | Phenylalanine-4-hydroxylase | Amino acid transport and metabolism [E] | 0.56 |
COG2968 | Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain | Function unknown [S] | 0.56 |
COG2859 | Outer membrane channel-forming protein BP26/OMP28, SIMPL family | Cell wall/membrane/envelope biogenesis [M] | 0.56 |
COG2173 | D-alanyl-D-alanine dipeptidase | Cell wall/membrane/envelope biogenesis [M] | 0.56 |
COG2154 | Pterin-4a-carbinolamine dehydratase | Coenzyme transport and metabolism [H] | 0.56 |
COG2070 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family | General function prediction only [R] | 0.56 |
COG2022 | Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) | Coenzyme transport and metabolism [H] | 0.56 |
COG1186 | Protein chain release factor PrfB | Translation, ribosomal structure and biogenesis [J] | 0.56 |
COG0499 | S-adenosylhomocysteine hydrolase | Coenzyme transport and metabolism [H] | 0.56 |
COG0468 | RecA/RadA recombinase | Replication, recombination and repair [L] | 0.56 |
COG0282 | Acetate kinase | Energy production and conversion [C] | 0.56 |
COG0251 | Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family | Defense mechanisms [V] | 0.56 |
COG0216 | Protein chain release factor RF1 | Translation, ribosomal structure and biogenesis [J] | 0.56 |
COG0214 | Pyridoxal 5'-phosphate synthase subunit PdxS | Coenzyme transport and metabolism [H] | 0.56 |
COG0187 | DNA gyrase/topoisomerase IV, subunit B | Replication, recombination and repair [L] | 0.56 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 87.57 % |
Unclassified | root | N/A | 12.43 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2088090014|GPIPI_16505903 | All Organisms → cellular organisms → Bacteria | 3354 | Open in IMG/M |
2162886012|MBSR1b_contig_366064 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1228 | Open in IMG/M |
2162886012|MBSR1b_contig_7962809 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1266 | Open in IMG/M |
2170459022|GZEQPF102G6ECT | All Organisms → cellular organisms → Bacteria | 505 | Open in IMG/M |
2228664022|INPgaii200_c0793164 | All Organisms → cellular organisms → Bacteria | 566 | Open in IMG/M |
2228664022|INPgaii200_c1021487 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 3780 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101313226 | All Organisms → cellular organisms → Bacteria | 829 | Open in IMG/M |
3300000789|JGI1027J11758_12879261 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 1015 | Open in IMG/M |
3300000956|JGI10216J12902_113114921 | All Organisms → cellular organisms → Bacteria | 511 | Open in IMG/M |
3300002568|C688J35102_120850662 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. | 1816 | Open in IMG/M |
3300004114|Ga0062593_100150339 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1764 | Open in IMG/M |
3300004114|Ga0062593_101211447 | Not Available | 793 | Open in IMG/M |
3300004114|Ga0062593_102208811 | All Organisms → cellular organisms → Bacteria | 617 | Open in IMG/M |
3300004157|Ga0062590_101432230 | All Organisms → cellular organisms → Bacteria | 689 | Open in IMG/M |
3300004643|Ga0062591_102830115 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 514 | Open in IMG/M |
3300005093|Ga0062594_100162854 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1486 | Open in IMG/M |
3300005093|Ga0062594_102811602 | All Organisms → cellular organisms → Bacteria | 541 | Open in IMG/M |
3300005093|Ga0062594_102959458 | All Organisms → cellular organisms → Bacteria | 530 | Open in IMG/M |
3300005104|Ga0066818_1006485 | All Organisms → cellular organisms → Bacteria | 792 | Open in IMG/M |
3300005288|Ga0065714_10184743 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 949 | Open in IMG/M |
3300005290|Ga0065712_10626580 | All Organisms → cellular organisms → Bacteria | 578 | Open in IMG/M |
3300005293|Ga0065715_10011875 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 2356 | Open in IMG/M |
3300005327|Ga0070658_10058343 | All Organisms → cellular organisms → Bacteria | 3141 | Open in IMG/M |
3300005327|Ga0070658_11650254 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 555 | Open in IMG/M |
3300005327|Ga0070658_11772513 | All Organisms → cellular organisms → Bacteria | 534 | Open in IMG/M |
3300005328|Ga0070676_10032783 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 2978 | Open in IMG/M |
3300005328|Ga0070676_11522154 | Not Available | 515 | Open in IMG/M |
3300005329|Ga0070683_102055342 | All Organisms → cellular organisms → Bacteria | 549 | Open in IMG/M |
3300005331|Ga0070670_100146362 | All Organisms → cellular organisms → Bacteria | 2044 | Open in IMG/M |
3300005331|Ga0070670_101617605 | All Organisms → cellular organisms → Bacteria | 596 | Open in IMG/M |
3300005335|Ga0070666_10953177 | All Organisms → cellular organisms → Bacteria | 635 | Open in IMG/M |
3300005335|Ga0070666_11007134 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 618 | Open in IMG/M |
3300005336|Ga0070680_100780909 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 823 | Open in IMG/M |
3300005339|Ga0070660_100640980 | Not Available | 889 | Open in IMG/M |
3300005343|Ga0070687_100190802 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1235 | Open in IMG/M |
3300005345|Ga0070692_11246102 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 531 | Open in IMG/M |
3300005347|Ga0070668_100114518 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 2148 | Open in IMG/M |
3300005347|Ga0070668_100802775 | All Organisms → cellular organisms → Bacteria | 836 | Open in IMG/M |
3300005347|Ga0070668_101468844 | All Organisms → cellular organisms → Bacteria | 623 | Open in IMG/M |
3300005354|Ga0070675_101985269 | Not Available | 536 | Open in IMG/M |
3300005355|Ga0070671_100086840 | All Organisms → cellular organisms → Bacteria | 2618 | Open in IMG/M |
3300005355|Ga0070671_100165262 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1871 | Open in IMG/M |
3300005364|Ga0070673_100008433 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 6853 | Open in IMG/M |
3300005364|Ga0070673_101385649 | Not Available | 661 | Open in IMG/M |
3300005366|Ga0070659_100038456 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3732 | Open in IMG/M |
3300005366|Ga0070659_100150514 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1898 | Open in IMG/M |
3300005366|Ga0070659_101860321 | Not Available | 539 | Open in IMG/M |
3300005367|Ga0070667_100632383 | All Organisms → cellular organisms → Bacteria | 987 | Open in IMG/M |
3300005434|Ga0070709_10677887 | All Organisms → cellular organisms → Bacteria | 800 | Open in IMG/M |
3300005435|Ga0070714_100673455 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 997 | Open in IMG/M |
3300005455|Ga0070663_101930660 | Not Available | 530 | Open in IMG/M |
3300005457|Ga0070662_100055177 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2882 | Open in IMG/M |
3300005457|Ga0070662_101641316 | Not Available | 555 | Open in IMG/M |
3300005543|Ga0070672_101063662 | All Organisms → cellular organisms → Bacteria | 718 | Open in IMG/M |
3300005547|Ga0070693_100212705 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1262 | Open in IMG/M |
3300005547|Ga0070693_100438953 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 913 | Open in IMG/M |
3300005548|Ga0070665_100604961 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1109 | Open in IMG/M |
3300005548|Ga0070665_101782981 | Not Available | 622 | Open in IMG/M |
3300005563|Ga0068855_100181365 | All Organisms → cellular organisms → Bacteria | 2380 | Open in IMG/M |
3300005563|Ga0068855_100321902 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1709 | Open in IMG/M |
3300005577|Ga0068857_101462392 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 665 | Open in IMG/M |
3300005578|Ga0068854_100096718 | All Organisms → cellular organisms → Bacteria | 2206 | Open in IMG/M |
3300005578|Ga0068854_101433499 | All Organisms → cellular organisms → Bacteria | 625 | Open in IMG/M |
3300005614|Ga0068856_100532530 | All Organisms → cellular organisms → Bacteria | 1196 | Open in IMG/M |
3300005614|Ga0068856_100712199 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1024 | Open in IMG/M |
3300005614|Ga0068856_101253644 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 757 | Open in IMG/M |
3300005616|Ga0068852_100563158 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 1141 | Open in IMG/M |
3300005616|Ga0068852_100598516 | All Organisms → cellular organisms → Bacteria | 1107 | Open in IMG/M |
3300005616|Ga0068852_101650216 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis | 663 | Open in IMG/M |
3300005719|Ga0068861_101489165 | Not Available | 664 | Open in IMG/M |
3300005841|Ga0068863_100003791 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 14948 | Open in IMG/M |
3300005841|Ga0068863_100042853 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 4299 | Open in IMG/M |
3300005844|Ga0068862_101081248 | All Organisms → cellular organisms → Bacteria | 796 | Open in IMG/M |
3300006237|Ga0097621_100268692 | Not Available | 1498 | Open in IMG/M |
3300006237|Ga0097621_101312956 | All Organisms → cellular organisms → Bacteria | 683 | Open in IMG/M |
3300006881|Ga0068865_101463510 | All Organisms → cellular organisms → Bacteria | 611 | Open in IMG/M |
3300006954|Ga0079219_11849044 | All Organisms → cellular organisms → Bacteria | 567 | Open in IMG/M |
3300009176|Ga0105242_12903985 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 530 | Open in IMG/M |
3300009177|Ga0105248_11249681 | Not Available | 840 | Open in IMG/M |
3300010227|Ga0136219_1001759 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 2767 | Open in IMG/M |
3300010375|Ga0105239_13038697 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 547 | Open in IMG/M |
3300010400|Ga0134122_11155215 | Not Available | 771 | Open in IMG/M |
3300012212|Ga0150985_105335858 | All Organisms → cellular organisms → Bacteria | 581 | Open in IMG/M |
3300012955|Ga0164298_10179387 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SE220 | 1219 | Open in IMG/M |
3300012957|Ga0164303_10156976 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1212 | Open in IMG/M |
3300012957|Ga0164303_11554841 | All Organisms → cellular organisms → Bacteria | 502 | Open in IMG/M |
3300012960|Ga0164301_10432392 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SM33 | 931 | Open in IMG/M |
3300012986|Ga0164304_10283479 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomicrobium → Sphingomicrobium flavum | 1127 | Open in IMG/M |
3300012987|Ga0164307_10879766 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SE220 | 719 | Open in IMG/M |
3300013104|Ga0157370_10053365 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 3855 | Open in IMG/M |
3300013297|Ga0157378_12314087 | Not Available | 589 | Open in IMG/M |
3300013307|Ga0157372_10652007 | All Organisms → cellular organisms → Bacteria | 1226 | Open in IMG/M |
3300014325|Ga0163163_11186897 | All Organisms → cellular organisms → Bacteria | 826 | Open in IMG/M |
3300015374|Ga0132255_100871103 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1345 | Open in IMG/M |
3300015374|Ga0132255_104069229 | All Organisms → cellular organisms → Bacteria | 620 | Open in IMG/M |
3300017792|Ga0163161_10099343 | All Organisms → cellular organisms → Bacteria | 2164 | Open in IMG/M |
3300018432|Ga0190275_10596854 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1151 | Open in IMG/M |
3300019377|Ga0190264_11219252 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 627 | Open in IMG/M |
3300025315|Ga0207697_10493379 | All Organisms → cellular organisms → Bacteria | 541 | Open in IMG/M |
3300025321|Ga0207656_10361648 | Not Available | 725 | Open in IMG/M |
3300025893|Ga0207682_10014087 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 3117 | Open in IMG/M |
3300025893|Ga0207682_10144950 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1068 | Open in IMG/M |
3300025893|Ga0207682_10283909 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 774 | Open in IMG/M |
3300025904|Ga0207647_10012147 | All Organisms → cellular organisms → Bacteria | 6009 | Open in IMG/M |
3300025904|Ga0207647_10078470 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 1983 | Open in IMG/M |
3300025905|Ga0207685_10846283 | Not Available | 506 | Open in IMG/M |
3300025906|Ga0207699_10300778 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1120 | Open in IMG/M |
3300025907|Ga0207645_10339648 | Not Available | 1004 | Open in IMG/M |
3300025908|Ga0207643_10853317 | Not Available | 590 | Open in IMG/M |
3300025909|Ga0207705_10432072 | All Organisms → cellular organisms → Bacteria | 1020 | Open in IMG/M |
3300025919|Ga0207657_10982253 | All Organisms → cellular organisms → Bacteria | 648 | Open in IMG/M |
3300025920|Ga0207649_10839714 | All Organisms → cellular organisms → Bacteria | 718 | Open in IMG/M |
3300025923|Ga0207681_10103817 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 2055 | Open in IMG/M |
3300025923|Ga0207681_10257805 | All Organisms → cellular organisms → Bacteria | 1364 | Open in IMG/M |
3300025925|Ga0207650_10037439 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 3535 | Open in IMG/M |
3300025925|Ga0207650_10079211 | All Organisms → cellular organisms → Bacteria | 2488 | Open in IMG/M |
3300025925|Ga0207650_10103273 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2197 | Open in IMG/M |
3300025925|Ga0207650_10672653 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 873 | Open in IMG/M |
3300025925|Ga0207650_11178912 | All Organisms → cellular organisms → Bacteria | 652 | Open in IMG/M |
3300025926|Ga0207659_11866484 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 510 | Open in IMG/M |
3300025931|Ga0207644_10000399 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 28260 | Open in IMG/M |
3300025931|Ga0207644_10048149 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 3046 | Open in IMG/M |
3300025931|Ga0207644_10066443 | All Organisms → cellular organisms → Bacteria | 2626 | Open in IMG/M |
3300025931|Ga0207644_10156736 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1766 | Open in IMG/M |
3300025931|Ga0207644_10635839 | All Organisms → cellular organisms → Bacteria | 887 | Open in IMG/M |
3300025933|Ga0207706_10188540 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1810 | Open in IMG/M |
3300025933|Ga0207706_10289524 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1428 | Open in IMG/M |
3300025933|Ga0207706_11715896 | All Organisms → cellular organisms → Bacteria | 505 | Open in IMG/M |
3300025949|Ga0207667_10230981 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1894 | Open in IMG/M |
3300025949|Ga0207667_10425806 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1350 | Open in IMG/M |
3300025972|Ga0207668_10324905 | All Organisms → cellular organisms → Bacteria | 1278 | Open in IMG/M |
3300025981|Ga0207640_10461302 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1049 | Open in IMG/M |
3300026067|Ga0207678_11918053 | All Organisms → cellular organisms → Bacteria | 517 | Open in IMG/M |
3300026078|Ga0207702_10861959 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → environmental samples → uncultured Sphingomonas sp. | 897 | Open in IMG/M |
3300026088|Ga0207641_11429740 | All Organisms → cellular organisms → Bacteria | 693 | Open in IMG/M |
3300026095|Ga0207676_10278410 | Not Available | 1518 | Open in IMG/M |
3300027514|Ga0208338_1018667 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 529 | Open in IMG/M |
3300028379|Ga0268266_10533907 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1123 | Open in IMG/M |
3300028379|Ga0268266_10812386 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 903 | Open in IMG/M |
3300028587|Ga0247828_10294580 | All Organisms → cellular organisms → Bacteria | 892 | Open in IMG/M |
3300028587|Ga0247828_11158136 | All Organisms → cellular organisms → Bacteria | 515 | Open in IMG/M |
3300028590|Ga0247823_11277859 | All Organisms → cellular organisms → Bacteria | 550 | Open in IMG/M |
3300028592|Ga0247822_11253699 | All Organisms → cellular organisms → Bacteria | 620 | Open in IMG/M |
3300031128|Ga0170823_14848442 | All Organisms → cellular organisms → Bacteria | 689 | Open in IMG/M |
(restricted) 3300031150|Ga0255311_1061646 | All Organisms → cellular organisms → Bacteria | 794 | Open in IMG/M |
3300031231|Ga0170824_105343989 | All Organisms → cellular organisms → Bacteria | 995 | Open in IMG/M |
(restricted) 3300031248|Ga0255312_1197270 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 508 | Open in IMG/M |
3300031548|Ga0307408_100104071 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2168 | Open in IMG/M |
3300031548|Ga0307408_100205915 | All Organisms → cellular organisms → Bacteria | 1595 | Open in IMG/M |
3300031548|Ga0307408_100951429 | All Organisms → cellular organisms → Bacteria | 789 | Open in IMG/M |
3300031548|Ga0307408_101304532 | Not Available | 680 | Open in IMG/M |
3300031548|Ga0307408_102032110 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 553 | Open in IMG/M |
3300031548|Ga0307408_102141526 | All Organisms → cellular organisms → Bacteria | 540 | Open in IMG/M |
3300031548|Ga0307408_102169171 | All Organisms → cellular organisms → Bacteria | 536 | Open in IMG/M |
3300031731|Ga0307405_11773654 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 548 | Open in IMG/M |
3300031824|Ga0307413_10007756 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 5011 | Open in IMG/M |
3300031824|Ga0307413_10094724 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1955 | Open in IMG/M |
3300031824|Ga0307413_11066834 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 696 | Open in IMG/M |
(restricted) 3300031825|Ga0255338_1000034 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 591903 | Open in IMG/M |
(restricted) 3300031825|Ga0255338_1163574 | All Organisms → cellular organisms → Bacteria | 667 | Open in IMG/M |
3300031852|Ga0307410_10107567 | All Organisms → cellular organisms → Bacteria | 2012 | Open in IMG/M |
3300031852|Ga0307410_10645891 | Not Available | 887 | Open in IMG/M |
3300031901|Ga0307406_10041082 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2880 | Open in IMG/M |
3300031903|Ga0307407_10063700 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2164 | Open in IMG/M |
3300031903|Ga0307407_10236226 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales | 1244 | Open in IMG/M |
3300031911|Ga0307412_11671273 | All Organisms → cellular organisms → Bacteria | 583 | Open in IMG/M |
3300031938|Ga0308175_101323659 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 803 | Open in IMG/M |
3300031939|Ga0308174_11468540 | All Organisms → cellular organisms → Bacteria | 584 | Open in IMG/M |
3300031995|Ga0307409_100379652 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1343 | Open in IMG/M |
3300032002|Ga0307416_100300319 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1595 | Open in IMG/M |
3300032004|Ga0307414_10579265 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1004 | Open in IMG/M |
3300032005|Ga0307411_10233372 | All Organisms → cellular organisms → Bacteria | 1436 | Open in IMG/M |
3300032005|Ga0307411_11138129 | All Organisms → cellular organisms → Bacteria | 705 | Open in IMG/M |
3300032005|Ga0307411_11208045 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 686 | Open in IMG/M |
3300032080|Ga0326721_10330069 | Not Available | 861 | Open in IMG/M |
3300032126|Ga0307415_100146270 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007 | 1812 | Open in IMG/M |
3300032126|Ga0307415_101867886 | All Organisms → cellular organisms → Bacteria | 582 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 16.38% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 14.12% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 10.17% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 9.60% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.08% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 5.08% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.52% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.39% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.39% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.39% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.39% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.82% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 2.26% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.13% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.13% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.13% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.13% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.13% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.13% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.56% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.56% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.56% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.56% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.56% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.56% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.56% |
Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.56% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.56% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.56% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.56% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.56% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.56% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.56% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.56% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.56% |
Soil | Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil | 0.56% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2088090014 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
2170459022 | Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition) | Environmental | Open in IMG/M |
2228664022 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005104 | Soil and rhizosphere microbial communities from Laval, Canada - mgHAC | Environmental | Open in IMG/M |
3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 | Host-Associated | Open in IMG/M |
3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Host-Associated | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300010227 | Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2 | Engineered | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Host-Associated | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300018432 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T | Environmental | Open in IMG/M |
3300019377 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027514 | Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91 (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
3300028590 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30 | Environmental | Open in IMG/M |
3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031248 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5 | Environmental | Open in IMG/M |
3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
3300031825 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195 | Environmental | Open in IMG/M |
3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Host-Associated | Open in IMG/M |
3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Host-Associated | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300032080 | Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016 | Environmental | Open in IMG/M |
3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
GPIPI_02851030 | 2088090014 | Soil | MGGFMFLYRLFSHDGLGNFSLLHEFKAQNDEAAAVLVGRWGDRPLELWQSSRKVNRRT |
MBSR1b_0281.00000990 | 2162886012 | Miscanthus Rhizosphere | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVTLPR |
MBSR1b_0922.00002840 | 2162886012 | Miscanthus Rhizosphere | MFPYRLFSHDGFGNFSLIQEFAAANDEAAALFVGRWRVRPLELWQATRKVQLWA |
FA2_00193920 | 2170459022 | Grass Soil | RVPPAGGSMHLYRLFSHDGLGNFTLVQEFNAQNDQAATTFVGRWPVRPLELWQSGRKVKCWG |
INPgaii200_07931641 | 2228664022 | Soil | VFPYRLFSHDGLGNFSLIQEFVAANDEAAALFIGRWRTCPLELWQSTRKVKLPSA |
INPgaii200_10214875 | 2228664022 | Soil | MFLYRLFSHDGLGNFSLLHEFKAQNDEAAAVLVGRWGDRPLELWQSSRKVNRRT |
INPhiseqgaiiFebDRAFT_1013132261 | 3300000364 | Soil | VFPYRLFSHDGLGNFSLIQEFVAANDEAAALFIGRWRTCPLELWQSTRKVKLPSA* |
JGI1027J11758_128792612 | 3300000789 | Soil | MFLYRLFSHDGLGNFSLLHEFKAQNDEAAAVLVGRWGDRPLELWQSSRKVNRRT* |
JGI10216J12902_1131149211 | 3300000956 | Soil | MLLYRLFSHDGLGNFSLLQEFKAQNDEDAARSVGRWNARPMELWQSSRIVNRWI* |
C688J35102_1208506622 | 3300002568 | Soil | LLQYRLFSHDGHGNFSLIQEFAAPNDADAAEHIGRWRVRPLELWQSSRKVKCWA* |
Ga0062593_1001503392 | 3300004114 | Soil | MFVYRLFSHDGGGNFSLLHEFKAQNDKDAAALVSRWDARPVELWQASRKVDRSA* |
Ga0062593_1012114471 | 3300004114 | Soil | FVFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVNLPR* |
Ga0062593_1022088112 | 3300004114 | Soil | PAGAYMHPYRLFAHDGLGNFNLLQEFSAQNDEAAAKFVGRWNNRPLELWQSSRRVKCWS* |
Ga0062590_1014322302 | 3300004157 | Soil | MHPYRLFAHDGLGNFNLLQEFSAQNDEAAAKFVGRWNNRPLELWQSSRRVKCWS* |
Ga0062591_1028301151 | 3300004643 | Soil | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVNLPR* |
Ga0062594_1001628541 | 3300005093 | Soil | MFQYQLFSHDGLGNFSLIQEFAAANDDAASRIVTPWLVRPLELWQCTRKVKRWS* |
Ga0062594_1028116021 | 3300005093 | Soil | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRRVKCWPTQDISSLGAET* |
Ga0062594_1029594581 | 3300005093 | Soil | MFLYRFFTHDGLGNFSLLQEFKAMNDEAAAKFVGRWTQRPLELWQCSRRVGEWA* |
Ga0066818_10064852 | 3300005104 | Soil | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKVKCWPTQDLNSLGAET* |
Ga0065714_101847431 | 3300005288 | Miscanthus Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAAKLMGRWGSGPFELWQSSRR |
Ga0065712_106265802 | 3300005290 | Miscanthus Rhizosphere | MHPYRLFAHDGLGNFNLLQEFSAQNDAAAAKFVGRWNNRPLELWQSSRRVKCWS* |
Ga0065715_100118756 | 3300005293 | Miscanthus Rhizosphere | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVTLPR* |
Ga0070658_100583433 | 3300005327 | Corn Rhizosphere | MFLYRLFSHDGSGNFSLIHEFAARNDEAAAVCVGRWKVRPLELWQATRKVGRWA* |
Ga0070658_116502541 | 3300005327 | Corn Rhizosphere | VFLYRLFSHDGSGNFNLIQEFAARDDEAATVVVGRWNVRPLELWQSTRKVKLWA* |
Ga0070658_117725131 | 3300005327 | Corn Rhizosphere | MFHYRLFSHDGVGNFSLIDEFGAQNDDAASMFVDRSLVRPLELWQSTRKVKCWPAS |
Ga0070676_100327831 | 3300005328 | Miscanthus Rhizosphere | MHPYRLFAHDGLGNFNLLQEFSAQNDAAAAKFVGRWNNRPLELWQSSRR |
Ga0070676_115221541 | 3300005328 | Miscanthus Rhizosphere | YRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVTLPR* |
Ga0070683_1020553421 | 3300005329 | Corn Rhizosphere | MFLYRLFSHDGSGNFSLIHEFAARDDDAAAAFVGRWNVRPLELWQATRKVRRWA* |
Ga0070670_1001463621 | 3300005331 | Switchgrass Rhizosphere | MFLYRLFLHDGLGNFSLLDEFSAVNDDAAARSVDRWHARPLELWQSCRKVNRWA* |
Ga0070670_1016176051 | 3300005331 | Switchgrass Rhizosphere | VFPYRLFSHDGLGNFSLIDEFVAPDDEAATLVAGRWRACQLELWQSTRKVKLPA* |
Ga0070666_109531772 | 3300005335 | Switchgrass Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAAKLMGRWGPGPFELWQSSRRVHQGT* |
Ga0070666_110071342 | 3300005335 | Switchgrass Rhizosphere | MFLYRLFSHDGLGNFSLLQEFKAQNDEVAERMIRDAVPRPLELWQSSRRVTRWA* |
Ga0070680_1007809093 | 3300005336 | Corn Rhizosphere | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKANLPR* |
Ga0070660_1006409802 | 3300005339 | Corn Rhizosphere | GAFVFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVTLPR* |
Ga0070687_1001908021 | 3300005343 | Switchgrass Rhizosphere | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQST |
Ga0070692_112461022 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | DGVGNFSLIDEFGAQNDDAASMFVDRSLVRPLELWQSTRKVKCWPASAKST* |
Ga0070668_1001145181 | 3300005347 | Switchgrass Rhizosphere | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKVKCWPTQD |
Ga0070668_1008027752 | 3300005347 | Switchgrass Rhizosphere | MFLYRLFAHDGLGNFSLLHEFRARNDDDAARSVGRWSARPLELWQSSRRVSQWA* |
Ga0070668_1014688441 | 3300005347 | Switchgrass Rhizosphere | MFPYRLFSHDGFGNFSLIQEFAAANDEAAALFVGRWRIRPLELWQATRKVQLWA* |
Ga0070675_1019852691 | 3300005354 | Miscanthus Rhizosphere | MFPYRLFSHYGFGNFSLIQEFAAANDEAAALFVGRWRVRPLELWQATRKVQLWA* |
Ga0070671_1000868401 | 3300005355 | Switchgrass Rhizosphere | MFQYQLFSHDGLGNFSLIQEFAAANDDAAARIVSPWLVRPLELWQSTRKVKRWP* |
Ga0070671_1001652627 | 3300005355 | Switchgrass Rhizosphere | LFSHDGLGNFSLIQEFAAANDDAASRIVTPWLVRPLELWQCTRKVKRWS* |
Ga0070673_1000084331 | 3300005364 | Switchgrass Rhizosphere | YRLFSHDGFGNFSLIQEFAAANDEAAALFVGRWRVRPLELWQATRKVQLWA* |
Ga0070673_1013856492 | 3300005364 | Switchgrass Rhizosphere | ATPPGAFVFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVTLPR* |
Ga0070659_1000384567 | 3300005366 | Corn Rhizosphere | MFLYRFFTHDGLGNFSLLQEFKAMNDEAAAKFVGRWTQRPLELWQCSRRVG |
Ga0070659_1001505147 | 3300005366 | Corn Rhizosphere | VFPYRLFSHDGLGNFSLIDEFVAPDDEAATLVAGRWRACQLELWQSTRKVKLP |
Ga0070659_1018603211 | 3300005366 | Corn Rhizosphere | FSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVNLPR* |
Ga0070667_1006323833 | 3300005367 | Switchgrass Rhizosphere | MFQYQLFSHDGLGNFSLIQEFAAANDDAASRVVTPWLVRPLELWQCTRKVKRWS* |
Ga0070709_106778872 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLYRLFSHDGLGNFTLVQEFNAQNDEVAATFVSRWAVRPLELWQSGRKVKCWG* |
Ga0070714_1006734552 | 3300005435 | Agricultural Soil | MLLYRLFSHDGLGNFTLVQEFNAQNDAAAATIVGRWPVRPLELWQSGRKVQRWG* |
Ga0070663_1019306602 | 3300005455 | Corn Rhizosphere | GAFVFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVNLPR* |
Ga0070662_1000551774 | 3300005457 | Corn Rhizosphere | MFLYRLFSHDGLGNFSLLHEFKAQNDDAAAALVGRWGDRPLELWQSSRKVNRWT* |
Ga0070662_1016413161 | 3300005457 | Corn Rhizosphere | MFPYRLFVHDGSGNFSLIQEFNAPNDEAATLIVDRSRLRPLELWQASRKVRLWS* |
Ga0070672_1010636622 | 3300005543 | Miscanthus Rhizosphere | MHFYRVFSHDGLGNFSLLQEFQAQNDEAAAKVVGRWSARPLELWQSSRRVNRWP* |
Ga0070693_1002127053 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | LLLYRLFSHDGHGNFSLVQEFSAPNDETAAEFIGRWRVRPLELWQSSRKVKCWA* |
Ga0070693_1004389531 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKV |
Ga0070665_1006049612 | 3300005548 | Switchgrass Rhizosphere | MLLYRLFSHDGLGNFSLLQEFKALNDEAAHKVVGGWSARPLELWQSSRKVDRWA* |
Ga0070665_1017829811 | 3300005548 | Switchgrass Rhizosphere | MHQYRLFSHDGLGNFSLLQEFRATNDEAATKLVGRWGSRSLELWQSTRVVNRWDA* |
Ga0068855_1001813653 | 3300005563 | Corn Rhizosphere | MFLYRLFSHDGSGNFSLIHEFAARNDEAAAVFVGRWKVRPLELWQATRKVGRWA* |
Ga0068855_1003219021 | 3300005563 | Corn Rhizosphere | MLLYRLFSHDGLGNFTLVQEFNAQNDAAAATIVGRWAVRPLELWQSSRKVQR |
Ga0068857_1014623921 | 3300005577 | Corn Rhizosphere | QLFKRVRRAGPGVSVFLYRLFSHDGSGNFNLIQEFAARDDEAATVVVGRWNVRPLELWQSTRKVKLWA* |
Ga0068854_1000967182 | 3300005578 | Corn Rhizosphere | MLVYRLFSHDGFGNFSLLQEFEAQDDEAAAKFVGRWPVRPLELWQSARKVKRLV* |
Ga0068854_1014334992 | 3300005578 | Corn Rhizosphere | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKV |
Ga0068856_1005325302 | 3300005614 | Corn Rhizosphere | MFVYRLFAHDGLGNFNLIQEFSAADDEAASMLAIRRRGRPLELWQSTRKVRLFA* |
Ga0068856_1007121992 | 3300005614 | Corn Rhizosphere | MFLYRLFSHDGSGNFNLIQEFTARDDEAATMVVGRWNVRPLELWQSTRKVKLWA* |
Ga0068856_1012536441 | 3300005614 | Corn Rhizosphere | RNQLFKRVRRAGPGVSVFLYRLFSHDGSGNFNLIQEFAARDDEAATVVVGRWNVRPLELWQSTRKVKLWA* |
Ga0068852_1005631582 | 3300005616 | Corn Rhizosphere | GPGVSVFLYRLFSHDGSGNFNLIQEFAARDDEAATVVVGRWNVRPLELWQSTRKVKLWA* |
Ga0068852_1005985162 | 3300005616 | Corn Rhizosphere | MLVYRLFSHDGFGNFSLLQEFEAQDDEAAAKFVGRWPVRPLELWQSARKVKRL |
Ga0068852_1016502161 | 3300005616 | Corn Rhizosphere | MFLYRLFSHDGFGNFSVLDEFKAPNDEAAAKLVDRWGPRPLELWQSSRRVFQR |
Ga0068861_1014891651 | 3300005719 | Switchgrass Rhizosphere | MFSYRLFSHDGLGNFSLIGEFDALNDDAAAVVVGRSRLRPLELWQATRKVKFWA* |
Ga0068863_10000379113 | 3300005841 | Switchgrass Rhizosphere | MFPYRLFSHDGFGNFSLIQEFAAANDEAAALFVGRWRVRPLELWQATRKVQLWA* |
Ga0068863_1000428532 | 3300005841 | Switchgrass Rhizosphere | VFPYRLFSHDGFGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVRLSA* |
Ga0068862_1010812481 | 3300005844 | Switchgrass Rhizosphere | VFPYRLFSHDGFGNFILIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVRLSA* |
Ga0097621_1002686922 | 3300006237 | Miscanthus Rhizosphere | AATPPGAFVFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVNLPR* |
Ga0097621_1013129561 | 3300006237 | Miscanthus Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAAKLMGRWGSGPFELWQSSSRVHQGT* |
Ga0068865_1014635101 | 3300006881 | Miscanthus Rhizosphere | MFPYRLFSHDGFGNFSLIQEFAAPNDEAAALFVGRWRVRPLELWQATRKVKFWA* |
Ga0079219_118490441 | 3300006954 | Agricultural Soil | MFLYRLFSHDGSGNFSLIKEFAALNDDAAAQQVSRWEVRPLELWQSTRKVKLWA* |
Ga0105242_129039851 | 3300009176 | Miscanthus Rhizosphere | MFLYRFFTHDGLGNFSLLQEFKAMNDEAAAKFVGRWTQRPLELWQCS |
Ga0105248_112496812 | 3300009177 | Switchgrass Rhizosphere | FSHDRGGNFSLLHEFKAQNDKDAAALVSRWDARPVELWQASRKVDRSA* |
Ga0136219_10017595 | 3300010227 | Soil | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKVKCWPTQDLNSLSVET* |
Ga0105239_130386972 | 3300010375 | Corn Rhizosphere | GNFSLIQEFAAANDEAAALFVGRWRVRPLELWQATRKVQLWA* |
Ga0134122_111552152 | 3300010400 | Terrestrial Soil | FVFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVPLPR* |
Ga0150985_1053358582 | 3300012212 | Avena Fatua Rhizosphere | LFPYRLFSHDGFGNFSLIEEFVAPNDEAAALLVGRWRTFPLELWQSTRKVKL |
Ga0164298_101793871 | 3300012955 | Soil | MFLYRLFSHDGSGNFSLVKEFAAPNDAAAAQQVGRWEVRPLELWQSTRKVKLWA* |
Ga0164303_101569762 | 3300012957 | Soil | MFMYRLFSHDGSGNFSLIREFAAPNDEAAAQQVGRWEVRTLELWQSTRKVKLCP* |
Ga0164303_115548411 | 3300012957 | Soil | MFPYRLFSHDGCGNFNLVKEFDAPNDAEAATIVDRSRLRPLELWQSTRKVRFWV* |
Ga0164301_104323921 | 3300012960 | Soil | MFMYRLFSHDGSGNFSLIREFAAPNDEAAAQQVGRWEVRPLELWQSTRKVKLCP* |
Ga0164304_102834792 | 3300012986 | Soil | MFHYRLFGHDGGGNFNLVSEFSAINDADAATIVEQSRVRPLELWQATRKVRLWS* |
Ga0164307_108797662 | 3300012987 | Soil | MFLYRLFSHDGSGNFSLVKEFAAPNDEAAAQQVGRWEVRPLELWQSTRKVKLWA* |
Ga0157370_100533653 | 3300013104 | Corn Rhizosphere | MLLYRLFSHDGLGNFTLVQEFNAQNDAAAATIVGRWAVRPLELWQSSRKVQRWG* |
Ga0157378_123140871 | 3300013297 | Miscanthus Rhizosphere | HDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTSKVTLPR* |
Ga0157372_106520074 | 3300013307 | Corn Rhizosphere | NSAAQACEGEHVAGATMFLYRLFSHDGSGNFSLIHEFAARNDEAAAGFVGRWKVRPLELWQAARKVGRWA* |
Ga0163163_111868971 | 3300014325 | Switchgrass Rhizosphere | SLAAETGSPPGALMFQYRLFSHDGLGNFSLLHEFKAQNDEAAAKLIGRWGSGPFELWQSSRRVHQGT* |
Ga0132255_1008711031 | 3300015374 | Arabidopsis Rhizosphere | LFSHDGLGNFSLLQEFKAQNDEVAERMIRDAVPRPLELWQSSRRVTRWA* |
Ga0132255_1040692292 | 3300015374 | Arabidopsis Rhizosphere | LLQYRLFSHDGQGNFSLIQQFSAPNDIDAAELIGRWSVRPLELWQSSRKVKCWA* |
Ga0163161_100993433 | 3300017792 | Switchgrass Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAAAKLMGRWGPGPFELWQSSRRVHQGT |
Ga0190275_105968543 | 3300018432 | Soil | MLLYRLFSHDGLGNFSLLQEFKAQNDEDAARSVGRWNARPMELWQSSRIVNRWI |
Ga0190264_112192521 | 3300019377 | Soil | MHQYRLFSHDGLGNFSLLQEFRATNDEAATKLVSRWGSRSLELWQSTRVVNRWDA |
Ga0207697_104933791 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAAKLMGRWGPGPFELWQSSRRVHQGT |
Ga0207656_103616481 | 3300025321 | Corn Rhizosphere | VFPYRLFSHDGLGNFSLIDEFVAPDDEAATLVAGRWRACQLELWQSTRKVKLPA |
Ga0207682_100140872 | 3300025893 | Miscanthus Rhizosphere | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVNLPR |
Ga0207682_101449502 | 3300025893 | Miscanthus Rhizosphere | MFLYRLFSHDGLGNFSLLHEFKAQNDDAAAALVGRWGDRPLELWQSSRKVNRWT |
Ga0207682_102839091 | 3300025893 | Miscanthus Rhizosphere | PLGDLMFVYRLFSHDGGGNFSLLHEFKAQNDKDAAALVSRWDARPVELWQASRKVDRSA |
Ga0207647_100121476 | 3300025904 | Corn Rhizosphere | MFLYRLFSHDGSGNFSLIHEFAARDDDAAAAFVGRWNVRPLELWQATRKVRRWA |
Ga0207647_100784702 | 3300025904 | Corn Rhizosphere | VFLYRLFSHDGSGNFNLIQEFAARDDEAATVVVGRWNVRPLELWQSTRKVKLWA |
Ga0207685_108462832 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MFVYRLFAHDGLGNFNLIQEFSAADDEAASMLAIRRRGRPLELWQ |
Ga0207699_103007782 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | MLLYRLFSHDGLGNFTLVQEFNAQNDEVAATFVSRWAVRPLELWQSGRKVKCWG |
Ga0207645_103396481 | 3300025907 | Miscanthus Rhizosphere | MHPYRLFAHDGLGNFNLLQEFSAQNDAAAAKFVGRWNNRPLELWQSSRRVK |
Ga0207643_108533172 | 3300025908 | Miscanthus Rhizosphere | MHPYRLFAHDGLGNFNLLQEFSAQNDAAAAKFVGRWNNRPLELWQSSRRVKCWS |
Ga0207705_104320722 | 3300025909 | Corn Rhizosphere | MFLYRLFSHDGSGNFSLIHEFAARNDEAAAVCVGRWKVRPLELWQATRKVGRWA |
Ga0207657_109822531 | 3300025919 | Corn Rhizosphere | VFPYRLFSHDGFGNFSLIQEFAAANDEAAALFVGRWRVRPLELWQATRKVQLWA |
Ga0207649_108397142 | 3300025920 | Corn Rhizosphere | MFLYRLFSHDGSGNFSLIHEFAARNDEAAAVFVGRWKVRPLELWQATRKVGRWA |
Ga0207681_101038172 | 3300025923 | Switchgrass Rhizosphere | VFPYRLFSHDGFGNFSLIQEFVAPNDEAATLLVGRWRACPLELWQSTRKVRLSA |
Ga0207681_102578051 | 3300025923 | Switchgrass Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAAKLMGRWGSGPFELWQSSRRVHQGT |
Ga0207650_100374393 | 3300025925 | Switchgrass Rhizosphere | MFVYRLFSHDGGGNFSLLHEFKAQNDKDAAALVSRWDARPVELWQASRKVDRSA |
Ga0207650_100792114 | 3300025925 | Switchgrass Rhizosphere | MFLYRLFLHDGLGNFSLLDEFSAVNDDAAARSVDRWHARPLELWQSCRKVNRWA |
Ga0207650_101032731 | 3300025925 | Switchgrass Rhizosphere | MFQYQLFSHDGLGNFSLIQEFAAANDDAASRIVTPWLVRPLELWQCTRKVKRWS |
Ga0207650_106726532 | 3300025925 | Switchgrass Rhizosphere | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRRVSQWA |
Ga0207650_111789121 | 3300025925 | Switchgrass Rhizosphere | MLIYRLFSHDGQGNFSLLQEFDAQSDADAERFVGRWRARPLELWQSARKVGRWA |
Ga0207659_118664842 | 3300025926 | Miscanthus Rhizosphere | EGPMFLYRLFLHDGLGNFSLLDEFSAVNDDAAARSVDRWHARPLELWQSCRKVNRWA |
Ga0207644_1000039925 | 3300025931 | Switchgrass Rhizosphere | MFQYQLFSHDGLGNFSLIQEFAAANDDAASRVVTPWLVRPLELWQCTRKVKRWS |
Ga0207644_100481491 | 3300025931 | Switchgrass Rhizosphere | MRIGSSMFFYRLFSHDGLGNFSLLHEFKAHDDEAAAVLANRWDSRPVEL |
Ga0207644_100664432 | 3300025931 | Switchgrass Rhizosphere | MFQYQLFSHDGLGNFSLIQEFAAANDDAAARIVSPWLVRPLELWQSTRKVKRWP |
Ga0207644_101567361 | 3300025931 | Switchgrass Rhizosphere | LFSHDGLGNFSLIQEFAAANDDAASRIVTPWLVRPLELWQCTRKVKRWS |
Ga0207644_106358393 | 3300025931 | Switchgrass Rhizosphere | SFMLFYRLFSHDGLGNFSLLHEFKAHDDEAAAVLANRWDSRPVELWQSSRRVKRWE |
Ga0207706_101885404 | 3300025933 | Corn Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAAKLMGRWGSGPFELW |
Ga0207706_102895242 | 3300025933 | Corn Rhizosphere | MFQYQLFSHDGLGNFSLIQEFAAANDDAASRVVTPWLVRPLELW |
Ga0207706_117158962 | 3300025933 | Corn Rhizosphere | MFPYRLFVHDGSGNFSLIQEFNAPNDEAATLIVDRSRLRPLELWQASRKVRLWS |
Ga0207667_102309813 | 3300025949 | Corn Rhizosphere | MFLYRLFSHDGFGNFSVLDEFKAPNDEAAAKLVDRWGPRPLELWQSS |
Ga0207667_104258061 | 3300025949 | Corn Rhizosphere | MFLYRLFSHDGFGNFSVLDEFKAPNDEAAAKLVDRWGPRPLELWQSSRRVFQRA |
Ga0207668_103249052 | 3300025972 | Switchgrass Rhizosphere | MFPYRLFSHDGFGNFSLIQEFAAANDEAAALFVGRWRIRPLELWQATRKVQLWA |
Ga0207640_104613021 | 3300025981 | Corn Rhizosphere | SHDGFGNFSLLQEFEAQDDEAAAKFVGRWPVRPLELWQSARKVKRLV |
Ga0207678_119180531 | 3300026067 | Corn Rhizosphere | MLSYRVFSHDGLGNFGLLQEFQAQNDEAAAKVVGRWSARPLELWQSSRRVNRWP |
Ga0207702_108619591 | 3300026078 | Corn Rhizosphere | MFLYRLFSHDGSGNFNLIQEFAARDDEAATVVVGRWNVRPLELWQSTRKVKLWA |
Ga0207641_114297401 | 3300026088 | Switchgrass Rhizosphere | YRLFAHDGLGNFNLLQEFSAQNDAAAAKFVGRWNNRPLELWQSSRRVKCWS |
Ga0207676_102784101 | 3300026095 | Switchgrass Rhizosphere | MHPYRLFAHDGLGNFNLLQEFSAQNDAAAAKFVGRWNNRPLEL |
Ga0208338_10186672 | 3300027514 | Soil | GNFSLIQEFAAPNDADAAEHIGRWRVRPLELWQSSRKVKCWA |
Ga0268266_105339071 | 3300028379 | Switchgrass Rhizosphere | MFLYRFFTHDGLGNFSLLQEFKAMNDEAAAKFVGRWTQRPLELWQCSRRVGEWA |
Ga0268266_108123862 | 3300028379 | Switchgrass Rhizosphere | MLLYRLFSHDGLGNFSLLQEFKALNDEAAHKVVGGWSARPLELWQSSRKVDRWA |
Ga0247828_102945804 | 3300028587 | Soil | HRETRMLIYRLFSHDGQGNFSLLQEFDAQSDADAERFVGRWRARPLELWQSARKVGRWA |
Ga0247828_111581361 | 3300028587 | Soil | MHAYRLFAHDGLGNFNLIQEFSAQNDEAAGRFVARWSARPLELWQSSRRVKCWPTQDLNSLGVET |
Ga0247823_112778592 | 3300028590 | Soil | MHAYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRRVRCWPTQDLNSLGVET |
Ga0247822_112536992 | 3300028592 | Soil | MHAYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRRVKCWPTQDLNSLGVET |
Ga0170823_148484422 | 3300031128 | Forest Soil | SPAGGSMHLYRLFSHDGLGNFTLVQEFNAQNDQAAATFVGRWPVRPLELWQSGRKVQCWG |
(restricted) Ga0255311_10616462 | 3300031150 | Sandy Soil | MLLYRLFSHDGLGNFTLVQEFNAQNDEAAATFVSRWPVRPLELWQSGRKVKCWG |
Ga0170824_1053439892 | 3300031231 | Forest Soil | MHLYRLFSHDGLGNFTLVQEFNAQNDQAAATFVGRWPVRPLELWQSGRKVQCWG |
(restricted) Ga0255312_11972701 | 3300031248 | Sandy Soil | FMHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKVKCWPTQDLNSLSVET |
Ga0307408_1001040714 | 3300031548 | Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAARLMGRWGPGPFELWQSSRKVHQGV |
Ga0307408_1002059153 | 3300031548 | Rhizosphere | MFSYRLFSHDGLGNFSLIGEFDAPNDDAAAVVVGRSRLRPLELWQATRKVRLWA |
Ga0307408_1009514291 | 3300031548 | Rhizosphere | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSR |
Ga0307408_1013045322 | 3300031548 | Rhizosphere | MHPYRLFAHDGLGNFNLLQEFSAQNDEAAAKFVGRWNNRPLELWQSSRRVKCWS |
Ga0307408_1020321102 | 3300031548 | Rhizosphere | FAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRRVKCWPTQDLNSLGAET |
Ga0307408_1021415261 | 3300031548 | Rhizosphere | AFMHPYRLFAHDGAGNFNLLQEFSAQNDEAAAKFVGRWNNRPLELWQSSRRVKCWS |
Ga0307408_1021691711 | 3300031548 | Rhizosphere | MFVYRLFSHDGLGNFSLIDEFKAQDDEAAGRLVSRWNARPLELWQSSRKVNRWA |
Ga0307405_117736542 | 3300031731 | Rhizosphere | EAFMFLYRLFSHDGLGNFSLLHEFKAQNDEAAERSVDRWSARPLELWQSSRRVNQWMIGDAA |
Ga0307413_100077563 | 3300031824 | Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQDDEAAARLVGRWGPGPFELWQSSRRVHQGT |
Ga0307413_100947244 | 3300031824 | Rhizosphere | MHQYRLFSHDGLGNFSLLQEFRATNDEAATKLVSRWGSRSLELWQSTRVV |
Ga0307413_110668342 | 3300031824 | Rhizosphere | MLLYRLFSHDGLGNFNLLQEFRALNDEAAHKVVGGWSARPLELWQSSRKVDRWA |
(restricted) Ga0255338_1000034623 | 3300031825 | Sandy Soil | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKVKCWPTQDLNSLSVET |
(restricted) Ga0255338_11635742 | 3300031825 | Sandy Soil | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKVRCWPTQDLNSLGIET |
Ga0307410_101075675 | 3300031852 | Rhizosphere | VLIYRLFSHDGYGNFNLLQEFEALNDQMADRFADRWLKAGPLEMWQSARKVKCWG |
Ga0307410_106458911 | 3300031852 | Rhizosphere | SHDGLGNFSLVHEFKAQNDAAAAVLVSRWDVRPLELWQSSRKVNRWT |
Ga0307406_100410824 | 3300031901 | Rhizosphere | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRRVKCWPTQDLNSLGAET |
Ga0307407_100637002 | 3300031903 | Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQDDEAAARLVGRWGPGPFELWQSSR |
Ga0307407_102362262 | 3300031903 | Rhizosphere | MHQYRLFSHDGLGNFSLLQEFRATNDEAATKLVGRWGSRSLELWQSTRVVNRWDA |
Ga0307412_116712732 | 3300031911 | Rhizosphere | MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVTRWSARPLELWQSSRKVKCWPTQDLNSLSVET |
Ga0308175_1013236592 | 3300031938 | Soil | MFPYRLFSHDGSGNFSLVKEFDAPNDDAASTIVVQSRVRPLELWQATRKV |
Ga0308174_114685402 | 3300031939 | Soil | MFPYRVFCHDGCGNFSLVTEFNAVNDAAAATIVEQTRLRPLELWQSTRKVRFWT |
Ga0307409_1003796522 | 3300031995 | Rhizosphere | MLLYRLFSHDGLGNFNLLQEFRALNDEAAHKVVGGWSARPLELWQSSR |
Ga0307416_1003003194 | 3300032002 | Rhizosphere | MFSYRLFSHDGLGNFSLIGEFDAPNDDAAAVVVGRSRLRPLELWQATRK |
Ga0307414_105792651 | 3300032004 | Rhizosphere | MHQYRLFSHDGLGNFSLLQEFRAHNDEAATKLVGRWGSRSLELWQSTRVVNRWDA |
Ga0307411_102333721 | 3300032005 | Rhizosphere | YLYRLFSHDGQGNFSLLQEFDAPNDADAERLVGRWRARPLELWQSARKVGRWA |
Ga0307411_111381291 | 3300032005 | Rhizosphere | VLVYRLFSHDGYGNFNLLQEFEALNDQMADRFADRWLKAGPLEMWQSARKVKCWG |
Ga0307411_112080451 | 3300032005 | Rhizosphere | MHPYRLFAHDGLGNFNLIQEFSAQDDEAAGKFVARWSARPLELWQSSRRVKCWPTQDLNSLGAET |
Ga0326721_103300691 | 3300032080 | Soil | VFPYRLFSHDGLGNFSLIQEFVAPNDEAATLLVGRWRACQLELWQSTRKVTLPR |
Ga0307415_1001462702 | 3300032126 | Rhizosphere | MFQYRLFSHDGLGNFSLLHEFKAQNDEAAARLMGRWGRWGPGPFELWQSSRKVHQGV |
Ga0307415_1018678861 | 3300032126 | Rhizosphere | FMHPYRLFAHDGLGNFNLLQEFSAQNDEAAAKFVGRWNNRPLELWQSSRRVKCWS |
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