NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F033417

Metagenome / Metatranscriptome Family F033417

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F033417
Family Type Metagenome / Metatranscriptome
Number of Sequences 177
Average Sequence Length 43 residues
Representative Sequence MSTLIDHLATDRIRGGRLVLAYSIGAVFGIALALAALLAAGTGP
Number of Associated Samples 117
Number of Associated Scaffolds 176

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 87.01 %
% of genes near scaffold ends (potentially truncated) 18.08 %
% of genes from short scaffolds (< 2000 bps) 84.75 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.017 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(14.124 % of family members)
Environment Ontology (ENVO) Unclassified
(23.164 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.972 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 52.78%    β-sheet: 0.00%    Coil/Unstructured: 47.22%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 176 Family Scaffolds
PF03663Glyco_hydro_76 13.64
PF13466STAS_2 5.68
PF09594GT87 1.14
PF08447PAS_3 1.14
PF05715zf-piccolo 0.57
PF00731AIRC 0.57
PF08281Sigma70_r4_2 0.57
PF02559CarD_CdnL_TRCF 0.57
PF12490BCAS3 0.57
PF00903Glyoxalase 0.57
PF01148CTP_transf_1 0.57
PF14742GDE_N_bis 0.57
PF104171-cysPrx_C 0.57
PF07681DoxX 0.57
PF00561Abhydrolase_1 0.57

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 176 Family Scaffolds
COG4833Predicted alpha-1,6-mannanase, GH76 familyCarbohydrate transport and metabolism [G] 13.64
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.57
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.57


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.02 %
All OrganismsrootAll Organisms38.98 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908036|A5_v_NODE_11738_len_1669_cov_9_164170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1719Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101322790Not Available666Open in IMG/M
3300000891|JGI10214J12806_10200685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1673Open in IMG/M
3300000955|JGI1027J12803_106706589Not Available1451Open in IMG/M
3300000956|JGI10216J12902_100966456Not Available642Open in IMG/M
3300000956|JGI10216J12902_101081827Not Available1135Open in IMG/M
3300000956|JGI10216J12902_108185988Not Available572Open in IMG/M
3300001305|C688J14111_10169802Not Available673Open in IMG/M
3300001686|C688J18823_10134404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1705Open in IMG/M
3300002568|C688J35102_119476871Not Available702Open in IMG/M
3300002568|C688J35102_119496762Not Available706Open in IMG/M
3300002568|C688J35102_119877777Not Available801Open in IMG/M
3300002568|C688J35102_120444265Not Available1074Open in IMG/M
3300002568|C688J35102_120514789Not Available1135Open in IMG/M
3300002568|C688J35102_120658094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1307Open in IMG/M
3300004114|Ga0062593_100184472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1638Open in IMG/M
3300004114|Ga0062593_103184870Not Available526Open in IMG/M
3300004153|Ga0063455_100178506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1019Open in IMG/M
3300004156|Ga0062589_100342899Not Available1181Open in IMG/M
3300004156|Ga0062589_100432688Not Available1082Open in IMG/M
3300004156|Ga0062589_101777177Not Available618Open in IMG/M
3300004479|Ga0062595_101150493Not Available684Open in IMG/M
3300004643|Ga0062591_101538832Not Available667Open in IMG/M
3300005093|Ga0062594_100152754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1516Open in IMG/M
3300005093|Ga0062594_101567888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300005093|Ga0062594_102245189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria592Open in IMG/M
3300005161|Ga0066807_1004046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1203Open in IMG/M
3300005164|Ga0066815_10034450Not Available778Open in IMG/M
3300005186|Ga0066676_10445112Not Available877Open in IMG/M
3300005332|Ga0066388_100067618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3853Open in IMG/M
3300005332|Ga0066388_100356022All Organisms → cellular organisms → Bacteria2110Open in IMG/M
3300005332|Ga0066388_102414562Not Available954Open in IMG/M
3300005332|Ga0066388_102593465Not Available923Open in IMG/M
3300005332|Ga0066388_104109606Not Available742Open in IMG/M
3300005444|Ga0070694_100677251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria837Open in IMG/M
3300005468|Ga0070707_100876832Not Available862Open in IMG/M
3300005468|Ga0070707_101370160Not Available674Open in IMG/M
3300005529|Ga0070741_10007208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria23211Open in IMG/M
3300005562|Ga0058697_10099146Not Available1206Open in IMG/M
3300005713|Ga0066905_100032791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2972Open in IMG/M
3300005713|Ga0066905_100216989Not Available1444Open in IMG/M
3300005713|Ga0066905_101249571Not Available666Open in IMG/M
3300005713|Ga0066905_101532623Not Available608Open in IMG/M
3300005764|Ga0066903_100018778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7235Open in IMG/M
3300005764|Ga0066903_100801419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1685Open in IMG/M
3300005764|Ga0066903_101971685All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300005937|Ga0081455_10009955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales9719Open in IMG/M
3300005937|Ga0081455_10028631All Organisms → cellular organisms → Bacteria5089Open in IMG/M
3300005937|Ga0081455_10105400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2253Open in IMG/M
3300005937|Ga0081455_10119418All Organisms → cellular organisms → Bacteria → Proteobacteria2079Open in IMG/M
3300005981|Ga0081538_10064837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2063Open in IMG/M
3300005981|Ga0081538_10274064Not Available630Open in IMG/M
3300005983|Ga0081540_1002345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria15502Open in IMG/M
3300005985|Ga0081539_10284627Not Available718Open in IMG/M
3300006046|Ga0066652_100230177Not Available1612Open in IMG/M
3300006046|Ga0066652_101356578Not Available668Open in IMG/M
3300006046|Ga0066652_101967124Not Available522Open in IMG/M
3300006048|Ga0075363_100961507Not Available525Open in IMG/M
3300006051|Ga0075364_10187413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1401Open in IMG/M
3300006572|Ga0074051_11648152Not Available1266Open in IMG/M
3300006575|Ga0074053_11114798Not Available559Open in IMG/M
3300006575|Ga0074053_11920509Not Available683Open in IMG/M
3300006604|Ga0074060_11821753Not Available1118Open in IMG/M
3300006755|Ga0079222_11316016Not Available660Open in IMG/M
3300006755|Ga0079222_11471129Not Available636Open in IMG/M
3300006953|Ga0074063_10066196All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300006954|Ga0079219_10118319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1344Open in IMG/M
3300006954|Ga0079219_12361267Not Available515Open in IMG/M
3300009012|Ga0066710_100862177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_91392Open in IMG/M
3300009098|Ga0105245_10420104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1340Open in IMG/M
3300009098|Ga0105245_12191464Not Available606Open in IMG/M
3300009789|Ga0126307_10000334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia30487Open in IMG/M
3300009789|Ga0126307_10001642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria14823Open in IMG/M
3300009789|Ga0126307_10021582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4873Open in IMG/M
3300009789|Ga0126307_10036200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3817Open in IMG/M
3300009789|Ga0126307_10067375All Organisms → cellular organisms → Bacteria2813Open in IMG/M
3300009789|Ga0126307_10888336Not Available720Open in IMG/M
3300009840|Ga0126313_10230523Not Available1431Open in IMG/M
3300009840|Ga0126313_11359854Not Available588Open in IMG/M
3300010036|Ga0126305_10444292Not Available860Open in IMG/M
3300010036|Ga0126305_10535860Not Available783Open in IMG/M
3300010037|Ga0126304_10098411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1847Open in IMG/M
3300010037|Ga0126304_10100974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1824Open in IMG/M
3300010037|Ga0126304_10165524Not Available1436Open in IMG/M
3300010038|Ga0126315_10065406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2011Open in IMG/M
3300010038|Ga0126315_10125981All Organisms → cellular organisms → Bacteria1497Open in IMG/M
3300010038|Ga0126315_10210469Not Available1175Open in IMG/M
3300010039|Ga0126309_10014477All Organisms → cellular organisms → Bacteria3331Open in IMG/M
3300010040|Ga0126308_10343289All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300010040|Ga0126308_10348477Not Available981Open in IMG/M
3300010040|Ga0126308_10757232Not Available670Open in IMG/M
3300010041|Ga0126312_10975387Not Available620Open in IMG/M
3300010042|Ga0126314_10297500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1151Open in IMG/M
3300010043|Ga0126380_11985831Not Available532Open in IMG/M
3300010044|Ga0126310_10603888Not Available818Open in IMG/M
3300010046|Ga0126384_12202799Not Available530Open in IMG/M
3300010145|Ga0126321_1504417Not Available956Open in IMG/M
3300010166|Ga0126306_10556067Not Available911Open in IMG/M
3300010166|Ga0126306_11414275Not Available576Open in IMG/M
3300010362|Ga0126377_10491457Not Available1257Open in IMG/M
3300010362|Ga0126377_12236333Not Available623Open in IMG/M
3300010397|Ga0134124_10676595All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300010400|Ga0134122_12700118Not Available548Open in IMG/M
3300012198|Ga0137364_10946338Not Available652Open in IMG/M
3300012200|Ga0137382_10176757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1459Open in IMG/M
3300012201|Ga0137365_11309926Not Available513Open in IMG/M
3300012205|Ga0137362_11099733Not Available675Open in IMG/M
3300012212|Ga0150985_110163861Not Available646Open in IMG/M
3300012212|Ga0150985_119943280Not Available660Open in IMG/M
3300012212|Ga0150985_121311143Not Available1000Open in IMG/M
3300012350|Ga0137372_10768658Not Available693Open in IMG/M
3300012354|Ga0137366_10562572Not Available820Open in IMG/M
3300012355|Ga0137369_10406691Not Available980Open in IMG/M
3300012356|Ga0137371_10732606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9755Open in IMG/M
3300012358|Ga0137368_10130456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1887Open in IMG/M
3300012400|Ga0134048_1367637Not Available516Open in IMG/M
3300012901|Ga0157288_10019061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1285Open in IMG/M
3300012924|Ga0137413_10088872All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300012929|Ga0137404_10849398Not Available831Open in IMG/M
3300012938|Ga0162651_100028201Not Available808Open in IMG/M
3300012951|Ga0164300_10018100All Organisms → cellular organisms → Bacteria2386Open in IMG/M
3300012955|Ga0164298_10276354Not Available1027Open in IMG/M
3300012957|Ga0164303_11413592Not Available521Open in IMG/M
3300012958|Ga0164299_10005782All Organisms → cellular organisms → Bacteria4219Open in IMG/M
3300012961|Ga0164302_10030678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2465Open in IMG/M
3300012986|Ga0164304_11807842Not Available511Open in IMG/M
3300013297|Ga0157378_11676690Not Available682Open in IMG/M
3300013772|Ga0120158_10264256Not Available852Open in IMG/M
3300015242|Ga0137412_10075416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2744Open in IMG/M
3300015371|Ga0132258_10513890All Organisms → cellular organisms → Bacteria2997Open in IMG/M
3300015371|Ga0132258_11609693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1639Open in IMG/M
3300015371|Ga0132258_12475814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1299Open in IMG/M
3300017947|Ga0187785_10250040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300017947|Ga0187785_10250040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300018028|Ga0184608_10532869Not Available500Open in IMG/M
3300018032|Ga0187788_10180088Not Available810Open in IMG/M
3300018071|Ga0184618_10060170Not Available1404Open in IMG/M
3300018433|Ga0066667_10790026Not Available806Open in IMG/M
3300019356|Ga0173481_10203744Not Available860Open in IMG/M
3300019361|Ga0173482_10111285Not Available1010Open in IMG/M
3300019362|Ga0173479_10610972Not Available572Open in IMG/M
3300021286|Ga0179583_1119207Not Available507Open in IMG/M
3300022756|Ga0222622_10440030Not Available924Open in IMG/M
3300022756|Ga0222622_10706351Not Available733Open in IMG/M
3300024288|Ga0179589_10026875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1976Open in IMG/M
3300024288|Ga0179589_10501642Not Available563Open in IMG/M
3300025552|Ga0210142_1016773Not Available1358Open in IMG/M
3300025552|Ga0210142_1036454Not Available940Open in IMG/M
3300025556|Ga0210120_1001279All Organisms → cellular organisms → Bacteria5841Open in IMG/M
3300025927|Ga0207687_11335923Not Available616Open in IMG/M
3300027401|Ga0208637_1025080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria667Open in IMG/M
3300028708|Ga0307295_10016534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1780Open in IMG/M
3300028708|Ga0307295_10068748Not Available930Open in IMG/M
3300028720|Ga0307317_10338463Not Available508Open in IMG/M
3300028784|Ga0307282_10235587Not Available878Open in IMG/M
3300028828|Ga0307312_10198071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1289Open in IMG/M
3300028828|Ga0307312_11104312Not Available525Open in IMG/M
3300028875|Ga0307289_10086316Not Available1274Open in IMG/M
3300028875|Ga0307289_10238444Not Available748Open in IMG/M
3300028881|Ga0307277_10027856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2239Open in IMG/M
3300028885|Ga0307304_10437841Not Available594Open in IMG/M
3300030006|Ga0299907_10184937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1722Open in IMG/M
3300030336|Ga0247826_10700355Not Available786Open in IMG/M
3300030785|Ga0102757_10044542Not Available922Open in IMG/M
3300030785|Ga0102757_11466509Not Available554Open in IMG/M
3300031091|Ga0308201_10363099Not Available534Open in IMG/M
3300031421|Ga0308194_10101720Not Available827Open in IMG/M
3300031740|Ga0307468_100045239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2248Open in IMG/M
3300031938|Ga0308175_100240983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1809Open in IMG/M
3300031939|Ga0308174_11524176Not Available573Open in IMG/M
3300032080|Ga0326721_10295090Not Available901Open in IMG/M
3300032174|Ga0307470_10629496Not Available807Open in IMG/M
3300033433|Ga0326726_10087307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2772Open in IMG/M
3300033433|Ga0326726_10266119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1600Open in IMG/M
3300033550|Ga0247829_10921812All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300034090|Ga0326723_0060150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1615Open in IMG/M
3300034681|Ga0370546_022229Not Available850Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.12%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil14.12%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.47%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil5.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.52%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere3.39%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.26%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.26%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.69%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.69%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.69%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.13%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.13%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.13%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.13%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.13%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.13%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere1.13%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.56%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.56%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.56%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.56%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.56%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908036Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005161Soil and rhizosphere microbial communities from Laval, Canada - mgLPAEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012400Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021286Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027401Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030785Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034681Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A5_v_000595002124908036SoilMGTLIDHLATDRIRGGRLVFAYTIGAIFGIALALIALSAAGP
INPhiseqgaiiFebDRAFT_10132279013300000364SoilMSTLIDQLATDRIRGGRLVLAYSVGAAFGIIVALAALLLAGTAP*
JGI10214J12806_1020068533300000891SoilMGTLIDHLATDRIRGGRLILAYSIGAVFGIALAIVALLAAGT
JGI1027J12803_10670658933300000955SoilMSTLIDQLATDRIRGGRLVLAYSVGAAFGIIVALAALLLA
JGI10216J12902_10096645613300000956SoilLATDRIRGGRLVLAYSIGAIFGIALAIGTLLAAGTGP*
JGI10216J12902_10108182723300000956SoilMSTLIDHLATDRIRGGRLVLAYSIGALFGIIVAVLALLVAGTGP*
JGI10216J12902_10818598813300000956SoilLALSTLIDHLATDRVRGGRLVLAYTVGAIFGVAVAVVALLAAGTGP*
C688J14111_1016980213300001305SoilMGTLIDQLATDRIRGGRLVLAYTIGALCGIAVAVLALAIAGTGP*
C688J18823_1013440413300001686SoilMNTLIDHLATDRIRGGRLVLAYSIGAIFGIALALVALLAAGPA*
C688J35102_11947687113300002568SoilMSTLIDHLATDRVRGGRLVLAYSIGAIFGTALALVALLATGTGL*
C688J35102_11949676213300002568SoilMSTLIDHLATDRIRGGRLVLAYAIGAVFGIAVAVLALAIAGTGP*
C688J35102_11987777723300002568SoilMGTLIDQLATDRIRGGRLVFAYSIGAVFGIALAVVALLAAGTGP*
C688J35102_12044426533300002568SoilMSTLIDQLATDRIRGGRLVLAYSIGAICGIVIAALALLIVG
C688J35102_12051478923300002568SoilMSTLINQLATDRIRGGRLVFAYSIGAIVGIALALVALLATGTGL*
C688J35102_12065809423300002568SoilMSTLIDQLATDRIRGGRLVLAYGIGVAFGIIVALAALLLAGTTA*
Ga0062593_10018447213300004114SoilMSTLVDYLASNRIRGGRLVLAYAVGAILGIAVAVVALLVTGTA*
Ga0062593_10318487013300004114SoilMSTLIDHLATDRIRGGRLVLAYSVGAICGIAVAVLALLLAGT
Ga0063455_10017850623300004153SoilMSTLIDHLATDRIRGGRLVLAYSVGAICGIVVAVLALLIAGTGP*
Ga0062589_10034289923300004156SoilMSTLIDHLATDRIRGGRLVLAYSVGAICGIAVAVLALLLAGTGP*
Ga0062589_10043268823300004156SoilMSTLIDQLATDRIRGGRLVLAYGIGAAFGIIVALAALLLAGTTP*
Ga0062589_10177717713300004156SoilMGTLIDHLATDRIRGGRLVLAYSIGAIFGIALAIVALLAAGTGP*
Ga0062595_10115049313300004479SoilREREVGMSTLIDHLATDRIRGGRLVLAYSVGAICGIAVAVLALLLAGTGP*
Ga0062591_10153883213300004643SoilDHLATDRIRGGRLVLAYSIGAIFGIALAIAALLAAGTGP*
Ga0062594_10015275413300005093SoilMGTLIDHLATDRIRGGRLVLAYSVGAIFGIALAMVALLAAGTGP*
Ga0062594_10156788823300005093SoilMSTLIDQLATDRIQGGRLVLAYGIGAAFGIIVALAALLLAGTAP*
Ga0062594_10224518913300005093SoilMSTLIDQLATDRIRGGRLVLAYGVGAAFGIIVALAALLLAGTAP*
Ga0066807_100404613300005161SoilVGTLIDHLATDRIRGGRLILAYSIGAVFGIALAIVALLAAGTGP*
Ga0066815_1003445023300005164SoilMSTLIDHLATDRIRGGRLVLAYSVGAVFGIALAMVALLATGTGF*
Ga0066676_1044511213300005186SoilMSTLIDQLATDRIRGGRLVLAYSIGAVFGIAVAVVALLVAGTGP*
Ga0066388_10006761823300005332Tropical Forest SoilMGTLIDHFASERIRGGRLILAYAVGIVFGAALAVALLAAGT*
Ga0066388_10035602223300005332Tropical Forest SoilMSTLIDHLATDRIRGGRLVLAYSIGAILGIAVAVVALAIAGTGP*
Ga0066388_10241456223300005332Tropical Forest SoilMGTLIDQLATDRLRGGRLVIAYAVGLFVGIGLAVAALLLAGTTP*
Ga0066388_10259346523300005332Tropical Forest SoilMSTLIDQLATDRIRGGRLVLAYGIGAIFGIALAVVALLATAG*
Ga0066388_10410960613300005332Tropical Forest SoilMSTLIDQLASERIRGGRLVLAYTIGALFGIVVAIAALTATAGL*
Ga0070694_10067725113300005444Corn, Switchgrass And Miscanthus RhizosphereMSTLIDQLATDRIRGGRLVLAYGIGATFGIIVALAALLLAGTAP*
Ga0070707_10087683223300005468Corn, Switchgrass And Miscanthus RhizosphereMSTLIDHLATDRIRGGRLVLAYTIGAIFGIALAVIALSAAGP*
Ga0070707_10137016023300005468Corn, Switchgrass And Miscanthus RhizosphereMGTLIDHLATDRIRGGRLVLAYSIGAVFGIALALAALLAAGTGP*
Ga0070741_10007208143300005529Surface SoilMSTLIDQFASDRIRGGRLVLAYVVGGIFGTAVALAALLVTGTTP*
Ga0058697_1009914633300005562AgaveMSTLIDHLATDRVRGGRLVLAYTIGIVCGVAVAALALLVAGTGP*
Ga0066905_10003279123300005713Tropical Forest SoilMGTLIDHFASDRIRGGWLVLAYSIGALCGIAVAGLALLIAGTGP*
Ga0066905_10021698943300005713Tropical Forest SoilMSTLIDHLATDRIRGGRLVFAYGIGAICGIAVAVAALLIAGTGP*
Ga0066905_10124957123300005713Tropical Forest SoilMNTLIDQLASERIRGGRLVLAYGIGAIFGIGLAVTALLATAG*
Ga0066905_10153262323300005713Tropical Forest SoilMGTLIDQLATDRLRGGRLVMAYAVGLFVGIALAVVALLLAGTTP*
Ga0066903_10001877833300005764Tropical Forest SoilMSTLIDHLATDRIRGRRLVIAYAIGALFGTVVAAAALLAAGTGP*
Ga0066903_10080141933300005764Tropical Forest SoilMGQLLNHLATDRLRGGKLVIAYSAGLLIGIAVAVAALLAAGPTP*
Ga0066903_10197168533300005764Tropical Forest SoilLATDRIRGGRLVLAYSIGAVFGIALAAAALLAAGPGV*
Ga0081455_1000995573300005937Tabebuia Heterophylla RhizosphereMSTLIDHLATDRIRGARLVLAYGIGAVFGIAVAVLALALAGTGP*
Ga0081455_1002863153300005937Tabebuia Heterophylla RhizosphereMSTLIDQLATDRVKGGRLVFAYSVGAIFGVALAIAALLAAGTGP*
Ga0081455_1010540033300005937Tabebuia Heterophylla RhizosphereMGTLIDRLATDRIRGGRLVFAYSIGAVFGIALAIAALLAAGTGP*
Ga0081455_1011941813300005937Tabebuia Heterophylla RhizosphereMGTLIDHLATDRLKGGRLVFAYSVGAVFGIVLAIAALLAAGPGV*
Ga0081538_1006483733300005981Tabebuia Heterophylla RhizosphereMSTLIDHLATDRIRGGRLVFAYSIGAVCGIVVAVLALLIAGTGP*
Ga0081538_1027406423300005981Tabebuia Heterophylla RhizosphereMGTLIDHLATDRLRGGKLVAAYTVGLIAGVAMALIALLATGTA*
Ga0081540_1002345113300005983Tabebuia Heterophylla RhizosphereMSTLIDHLATDRIRGGRLVLAYSIGAACGIAVAVVALLLAGTAP*
Ga0081539_1028462723300005985Tabebuia Heterophylla RhizosphereMGTLIDHLATDRVRGGRLFAAYSVGLIVGIAVALAALLAAGTTP*
Ga0066652_10023017733300006046SoilMSTLIDHLATDRIRGGRLVLAYGIGAVFGIVVAALALMIAGTGP*
Ga0066652_10135657823300006046SoilATDRLRGGKLVVAYTAGLLVGIAVALVALLAAGTTP*
Ga0066652_10196712413300006046SoilMSTLIEQLANDRIRGARLVLAYAVGGIFGIAVALALLAAL*
Ga0075363_10096150733300006048Populus EndosphereMSTLIDQLATDRIRGGRLVLAYSIGAIFGIALALVALVAAGP*
Ga0075364_1018741343300006051Populus EndosphereMSTLIDHLATDRIRGGRLVLAYSVGAVFGIALAIVALLAAGTT*
Ga0074051_1164815223300006572SoilMGTLIDHLATDRIRGGRLILAYSIGAVFGIALAIVALLAAGTGP*
Ga0074053_1111479813300006575SoilREREVGMSTLIDHLATDRIRGGRLVLAYSVGAVFGIALAMVALLATGTGF*
Ga0074053_1192050933300006575SoilMTTLIDHLATDRIRGGRLVLAYSIGAIFGIALAIVALVAAGTGP*
Ga0074060_1182175323300006604SoilMSTLIDHLATDRIRGGRLILAYSIGAVFGIALAIVALLAAGTGP*
Ga0079222_1131601623300006755Agricultural SoilMGTLIDHLATDRLRGSKLVIAYTVGLLVGIAVALVALLVTGTTP*
Ga0079222_1147112923300006755Agricultural SoilEREVCMGTLIDHLATDRLRGGRLVIAYTVGLLVGVGLALVALLVTGTTP*
Ga0074063_1006619623300006953SoilGMGTLIDHLATDRIRGGRLILAYSIGAVFGIALAIVALLAAGTGP*
Ga0079219_1011831913300006954Agricultural SoilMSTLIDQLATDRIRGGRLVLAYTIGALCGIAVAVLAL
Ga0079219_1236126713300006954Agricultural SoilMSTLIDQLASDRIRGARLVLAYVVGGIFGTAVAVLALLAAGTGP*
Ga0066710_10086217723300009012Grasslands SoilMSTLIDQLANDRIRGARLVLAYAIGGIVGIALALGLLAAL
Ga0105245_1042010423300009098Miscanthus RhizosphereVGTLIDHLTTERVRGGRLVIAYTVGVVFGIGLALVALLATGTGL*
Ga0105245_1219146413300009098Miscanthus RhizosphereREVGMGTLIDHLATDRIRGGRLVLAYSIGAIFGIALAIVALLAAGTGP*
Ga0126307_1000033473300009789Serpentine SoilMSTLIDHLATDRIRGGRLVVAYTIGAVCGIAVAVVALLIAGTGP*
Ga0126307_10001642113300009789Serpentine SoilMSTLIDHLATDRIRGGRLVLAYSIGAIFGIVVALAALLVAGTSI*
Ga0126307_1002158253300009789Serpentine SoilMSTLIDHLATDRVRGGRLVLAYSIGAICGIALALLALLVTGTAI*
Ga0126307_1003620033300009789Serpentine SoilMSTLIDHLATDRIRGGRLVLAYSIGAVCGIAVAVLALLIAGTGP*
Ga0126307_1006737543300009789Serpentine SoilMGTLIDHLATDRLRGGKLVIAYTVGILVGVAVALVALLAAGTTP*
Ga0126307_1088833613300009789Serpentine SoilMSTLIDHLASDRVRGARLVLAYAIGILVGVVLALIALVAAGTTP*
Ga0126313_1023052323300009840Serpentine SoilMGTLIDHLATDRLRGGKLVVAYTVGLLVGVAVALVALLAAGTTP*
Ga0126313_1135985423300009840Serpentine SoilMGTLIDHLATDRLRGGKLVIAYTVGLLVGVAVALIALLVAGTTP*
Ga0126305_1044429223300010036Serpentine SoilSTLIDHLATDRIRGGRLVLAYSIGAIFGIVVALAALLVAGTSI*
Ga0126305_1053586013300010036Serpentine SoilMGRLIDHLATDRLRGGKLVIAYTVGILGGVAVALVALLAAGTTP*
Ga0126304_1009841123300010037Serpentine SoilMTTLIDHLATDRIRGGRLVLAYTIGIIFGIAVAAAALLTAGP*
Ga0126304_1010097433300010037Serpentine SoilMSTLIDHLASDRIGGGRLVLAYTVGAIFGIALALVALGAAGTGP*
Ga0126304_1016552423300010037Serpentine SoilMSTLIDHLATDRVRGGRLVLAYSIGAICGIALALLALLVAGTSI*
Ga0126315_1006540613300010038Serpentine SoilMGTLIDHLATDRIRGGRLVLAYTIGAIVGIALAIVALGAAGA*
Ga0126315_1012598143300010038Serpentine SoilMGTLIDHLASDRVRGARLVLAYAIGILVGVVLALIALVAAGTTP*
Ga0126315_1021046923300010038Serpentine SoilMTTLIDHLATDRIRGRRLVLAYTIGIIFGIAVAAAALLTAGP*
Ga0126309_1001447743300010039Serpentine SoilMGTLIDQLASDRIRGTRLVIAYGIGILIGVIVALIALLAAGTTP*
Ga0126308_1034328933300010040Serpentine SoilMSTLIDQLASDRIRGGRLVLAYTVGAFFGIAVALLALLVTGTA*
Ga0126308_1034847713300010040Serpentine SoilMSTLIDHLASDRVRGARLVLAYAIGILVGVVLALIA
Ga0126308_1075723223300010040Serpentine SoilMGTLIDHLASDRIRGGRLVVAYTIGAIFGTALAIAALGATAGL*
Ga0126312_1097538723300010041Serpentine SoilMSTLIDHLATDRIRGGRLVLAYSIGAIFGIVVALAALLAAGTSI*
Ga0126314_1029750013300010042Serpentine SoilLATDRLRGGRLVIAYTVGLLVGVVVALIALLAAGTTP*
Ga0126380_1198583123300010043Tropical Forest SoilVGPLIDQLATDRLRGGKLLIAYGVGLFVGIALALVALLVAGTTP*
Ga0126310_1060388823300010044Serpentine SoilMSTLIDQLATDRVRGGRLVLAYSIGAIFGTALAVAALVATGTGI*
Ga0126384_1220279923300010046Tropical Forest SoilMSTLIDQLATDRIRGGRLVLAYGIGAIFGIVVALAALLLAGPAA*
Ga0126321_150441723300010145SoilMSTLIDHLATDRIRGGRLVLAYGIGAVFGIAVAVLALALAGTGP*
Ga0126306_1055606723300010166Serpentine SoilMGTLIDHLATDRLRGGKLVVAYTIGLLVGVVVALIALLAAGSAP*
Ga0126306_1141427513300010166Serpentine SoilMNTLIDQLATDRIRGGRLVLAYIVGIVFGVAVAGAALLTAGP*
Ga0126377_1049145723300010362Tropical Forest SoilMGTLIDHLATDRIRGGRLVFAYSVGAACGIVVAVLALLLAGTGP*
Ga0126377_1223633323300010362Tropical Forest SoilLIDHLATDRIRGARLVLAYGIGAVFGIAVAVLALALAGTGP*
Ga0134124_1067659513300010397Terrestrial SoilMSTLIDQLATDRIRGGRLVLAYGIGAAFGIIVALAALLLAGTA
Ga0134122_1270011823300010400Terrestrial SoilMGTLIDHLATDRIRGGRLVLAYSIGAIFGIALAIAALLAAGTGP*
Ga0137364_1094633823300012198Vadose Zone SoilREREVGMSTLIDHLATDRIRGGRLVLAYTVGAIFGIAVALVALLVAGTGP*
Ga0137382_1017675723300012200Vadose Zone SoilMSTLIDHLATDRIRGGRLVLAYTVGAIFGIAVALGALLVAGTGP*
Ga0137365_1130992613300012201Vadose Zone SoilMSTLIDHLATDRIRGGRLVFAYTIGAVVGIALAIIALSAAGP*
Ga0137362_1109973313300012205Vadose Zone SoilMSTLIDHLATDRIRGGRLVLAYTVGAIFGIALAIVALQAAGTGP*
Ga0150985_11016386123300012212Avena Fatua RhizosphereMSTLIDHLATDRIRGGRLVLAYSIGAIFGIALALVALAAAGP*
Ga0150985_11994328023300012212Avena Fatua RhizosphereMSTLIDHLATDRIRGGRLVLAYSIGAIFGIALALVALLATGTGF*
Ga0150985_12131114323300012212Avena Fatua RhizosphereMSTLIDHLATDRIRGGRLVLAYTIGAIFGIVVAVVALLIAGTGP*
Ga0137372_1076865823300012350Vadose Zone SoilMSTLIDHLATDRIRGGRLVLAYSIGAVFGIALAIIALLAAGTGP*
Ga0137366_1056257223300012354Vadose Zone SoilMSTLIDHLATDRIRGGRLVLAYAIGAIFGIALAIVALSAAGP*
Ga0137369_1040669123300012355Vadose Zone SoilMSTLIDRLATDRIRGGRLVLAYSIGAVFGIALAIAALLAAGTGP*
Ga0137371_1073260623300012356Vadose Zone SoilMSTLIDQLANDRIRGARLVRAYAIGGIVGIALALGLLAAL*
Ga0137368_1013045623300012358Vadose Zone SoilMSTLIDHLATDRIRGGRLVLAYGIGAIFGVALAIVALSAAGP*
Ga0134048_136763723300012400Grasslands SoilMSTLIDHLATDRIRGGRLVLAYSIGAVFGIAVAVVALLVAGTGP*
Ga0157288_1001906133300012901SoilMGTLIDHLATDRIRGGRLILAYSIGAVFGIALAIVALL
Ga0137413_1008887233300012924Vadose Zone SoilSTLIDHLATNRIRGGRLVLAYSIGAIFGTALALIALLAAGTSL*
Ga0137404_1084939823300012929Vadose Zone SoilMSTLIDHLATDRIRGGRLVLAYSIGAVFGIALALAALLAAGTGP*
Ga0162651_10002820123300012938SoilMGTLIDHLATDRLRGGKLVIAYTIGLLIGIVLALVALVATGTTP*
Ga0164300_1001810013300012951SoilMSALIDQLATDRIRGGRLVLAYSIGAICGIVIAALALLIAGTGP*
Ga0164298_1027635413300012955SoilMSTLIDQLATDRIRGGRLVLAYGVGAAFGIIVALAALLL
Ga0164303_1141359213300012957SoilMSTLIDQLATDRIRGGRLVLAYGIGAACGIIVALAALLLAGSAP*
Ga0164299_1000578233300012958SoilMSTLIDQLATDRIRGGRLVLAYSIGAICGIVIAALALLIAGTGP*
Ga0164302_1003067823300012961SoilMSTLIDHLATDRIRGGRLVLAYSIGAICGIVLAVLALAIAGTGP*
Ga0164304_1180784223300012986SoilMSTLIYQLATDRIRGGRLVLAYGIGAACGIIVALAALLLAGSAP*
Ga0157378_1167669023300013297Miscanthus RhizosphereMGTLIDHLATDRIRGGRLVLAYSIDAIFGIALAIVALLAAGTGP*
Ga0120158_1026425613300013772PermafrostMSTLINHLATDRVKGGRLVFAYAIGGVFGTALAIAALLAAGTGP*
Ga0137412_1007541623300015242Vadose Zone SoilMSTLIDHLATNRIRGGRLVLAYSIGAIFGTALALIALLAAGTSL*
Ga0132258_1051389023300015371Arabidopsis RhizosphereMGTLIDHLATDRLRGGRLLIAYVVGLVLGIGVALVALLAAAPTP*
Ga0132258_1160969313300015371Arabidopsis RhizosphereMGTLIDRLATDRLRGSRLVIAYGIGLLVGIAVALVALLVAGTTP*
Ga0132258_1247581423300015371Arabidopsis RhizosphereMSTLIDQLATDRIRGGRLVLAYGIGAAFGIIVALAALLLAGTAP*
Ga0187785_1025004023300017947Tropical PeatlandMSTLIDQLATDRIRGGRLVLAYSIGAVFGIALAAAALVAAGTGV
Ga0187785_1025004033300017947Tropical PeatlandMSTLIDQFSTDRIRGGRLVLAYGIGAVFGIAFAVAALFTWMALLGR
Ga0184608_1053286913300018028Groundwater SedimentMSTLIDHLATDRIRGGRLVLAYSIGAIFGIALALVALLAAGPA
Ga0187788_1018008823300018032Tropical PeatlandMSTLIDQFSTDRIRGGRLVLAYGIGAVFGIAFAVAALFAAGTTP
Ga0184618_1006017033300018071Groundwater SedimentMGTLIDHLATDRIRGGRLVLAYSIGAVFGIALAIVALLAAGTGP
Ga0066667_1079002623300018433Grasslands SoilMSTLIDHLATDRIRGGRLVLAYSIGAIFGIALALIALLAAGPA
Ga0173481_1020374423300019356SoilMGTLIDHLATDRIRGGRLVLAYSIGAIFGIALAIVALLAAGTGP
Ga0173482_1011128523300019361SoilMGTLIDHLATDRIRGGRLILAYSIGAVFGIALAIVALLAAGTGP
Ga0173479_1061097213300019362SoilMSTLIDHLATDRIRGGRLVLAYGIGAFCGIAVAVVALLLAGTGP
Ga0179583_111920713300021286Vadose Zone SoilMSTLIDRLASDRIGGGRLVLAYVIGAVFGIAVALVALAAA
Ga0222622_1044003023300022756Groundwater SedimentMSTLIDQLATDRIRGGRLVLAYSIGAICGIVIAALALLIAGTGP
Ga0222622_1070635113300022756Groundwater SedimentREREAGMSTLIDHLATDRIRGGRLVLAYSIGAICGIVVAALALAIAGTGP
Ga0179589_1002687533300024288Vadose Zone SoilMSTLIDRLASDRIGGGRLVLAYVIGAVFGIAVALVALAAAGPA
Ga0179589_1050164223300024288Vadose Zone SoilMSTLIDHLATNRIRGGRLVLAYSIGAIFGTALALIALLAAGTSL
Ga0210142_101677323300025552Natural And Restored WetlandsMGTLIDHLATDRIRGGRLILAYSIGAIFGIALALVALAAAGP
Ga0210142_103645423300025552Natural And Restored WetlandsMNTLIDHLATDRIRGGRLVLAYSIGAVFGIALAIAALLAAGTGP
Ga0210120_100127913300025556Natural And Restored WetlandsMGTLIDHLATDRIRGGRLILAYSIGAIFGIALALVALAAA
Ga0207687_1133592313300025927Miscanthus RhizosphereVGTLIDHLTTERVRGGRLVIAYTVGVVFGIGLALVALLATGTGL
Ga0208637_102508023300027401SoilMGTLIDQLSSDRIRGGRFVLAYAVGIVFGVALAIAALSAAGT
Ga0307295_1001653423300028708SoilMSTLIDQLATDRIRGGRLVLAYSIGAFCGIVIAALALLIAGTGP
Ga0307295_1006874813300028708SoilMSTLIDHLATDRIRGGRLVLAYSIGAIFGIALALVALAAAGP
Ga0307317_1033846323300028720SoilMSTLIDQLATDRIRGGRLVLAYSIGAFCGIIIAALALLIAGTGP
Ga0307282_1023558723300028784SoilMGTLIDHLATDRIRGGRLVLAYTIGAIFGIALALVALSAAGP
Ga0307312_1019807143300028828SoilMSTLIDQLATDRIRGGRLVLAYSIGAFCGIVIAALALLI
Ga0307312_1110431213300028828SoilMSTLIDQLASDRIRGGRLVLAYTIGAVFGIALAVMALLATG
Ga0307289_1008631623300028875SoilMSTLIDHLATDRIRGGRLVLAYSIGAIFGIALALIALAAAGP
Ga0307289_1023844423300028875SoilMSTLIDQLATDRIRGGWLVLAYSIGAICGIVIAALALLIAGTGP
Ga0307277_1002785623300028881SoilMSTLIDQLATDRIRGGRLVLAYSIGAICGIVIAALALLITGTGP
Ga0307304_1043784113300028885SoilMSTLIDQLATDRIRGGRLVLAYSIGALCGIVIAALALLIAGTGP
Ga0299907_1018493733300030006SoilMSTLIDHLATDRIRGGRLVLAYLVGIVFGVAVAGAALLTAGP
Ga0247826_1070035523300030336SoilMGTLIDHLATDRLRGRKLVIAYTIGLLIGIALALVALLAAGTTP
Ga0102757_1004454223300030785SoilMGTLIDHLATDRIRGGRLVLAYSIGAVCGIIVAVLALLIAGTGP
Ga0102757_1146650923300030785SoilMSTLIDQLATDRIRGGRLVLAYGIGAICGIAIAGLALLIAGTGP
Ga0308201_1036309923300031091SoilAREREVGMSTLIDQLATDRIRGGRLVLAYSIGAFCGIVIAALALLIAGTGP
Ga0308194_1010172013300031421SoilMSTLIDHLATDRIRGGRLVLAYSIGAIFGIALALVALLAA
Ga0307468_10004523923300031740Hardwood Forest SoilMGTLIDHLATDRLRGGKLVIAYTIGLLIGIALALVALLATGTTP
Ga0308175_10024098333300031938SoilMSTLIDQLATDRVRGARLVLAYSIGAIFGIALALVALLATGTSF
Ga0308174_1152417623300031939SoilMSTLIDHLATDRIRGGRLVLAYSIGAVFGIALALVALL
Ga0326721_1029509023300032080SoilMGTLIDHLATDRVRGGRLVAAYSVGLIVGVLVALAALLAAGTTP
Ga0307470_1062949613300032174Hardwood Forest SoilMSTLIDHLATDRIRGGRLVLAYSIGAICGIVLAVLALAIAGTGP
Ga0326726_1008730733300033433Peat SoilMGTLIDQLATDRIRGGRFVLAYSIGAVFGIALALVALMAAGTGF
Ga0326726_1026611923300033433Peat SoilVSTLIDHLATDRIRGGRLVLAYSIGAIFGVALAIAALAAAGTGP
Ga0247829_1092181213300033550SoilHLASDRIRGGRLVLAYTVGAIFGIAVALLALLVTGNA
Ga0326723_0060150_89_2233300034090Peat SoilMGTLIDQLATDRMRGGRLVLAYSIGAVFGIALALVALMAAGTGF
Ga0370546_022229_697_8313300034681SoilMSTLIDHLATDRIRGGRLVLAYSIGAFFGIALAIVALLAAGTGP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.