Metagenome / Metatranscriptome Family F033388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033388
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	54 residues
Representative Sequence	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Number of Associated Samples	87
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.93 %
% of genes near scaffold ends (potentially truncated)	26.55 %
% of genes from short scaffolds (< 2000 bps)	79.10 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.011 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (40.113 % of family members)
Environment Ontology (ENVO)	Unclassified (48.023 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (49.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.12% β-sheet: 0.00% Coil/Unstructured: 54.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF04392	ABC_sub_bind	27.68
PF00072	Response_reg	10.73
PF03992	ABM	2.26
PF00857	Isochorismatase	2.26
PF00578	AhpC-TSA	1.69
PF01613	Flavin_Reduct	1.69
PF13419	HAD_2	1.13
PF01135	PCMT	1.13
PF09084	NMT1	1.13
PF12680	SnoaL_2	1.13
PF13379	NMT1_2	1.13
PF03692	CxxCxxCC	0.56
PF13185	GAF_2	0.56
PF00589	Phage_integrase	0.56
PF00872	Transposase_mut	0.56
PF13744	HTH_37	0.56
PF08031	BBE	0.56
PF09413	DUF2007	0.56
PF16113	ECH_2	0.56
PF12700	HlyD_2	0.56
PF09650	PHA_gran_rgn	0.56
PF00893	Multi_Drug_Res	0.56
PF13424	TPR_12	0.56
PF11604	CusF_Ec	0.56
PF13358	DDE_3	0.56
PF01548	DEDD_Tnp_IS110	0.56
PF07366	SnoaL	0.56
PF05977	MFS_3	0.56
PF00873	ACR_tran	0.56
PF01436	NHL	0.56
PF01145	Band_7	0.56
PF08666	SAF	0.56
PF13458	Peripla_BP_6	0.56
PF04075	F420H2_quin_red	0.56
PF02775	TPP_enzyme_C	0.56
PF02945	Endonuclease_7	0.56
PF00378	ECH_1	0.56
PF03781	FGE-sulfatase	0.56
PF13545	HTH_Crp_2	0.56
PF01494	FAD_binding_3	0.56
PF01435	Peptidase_M48	0.56
PF13360	PQQ_2	0.56
PF03404	Mo-co_dimer	0.56
PF13189	Cytidylate_kin2	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	27.68
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	2.26
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.26
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	1.69
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.13
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.13
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.13
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.13
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.13
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.13
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.13
COG2076	Multidrug transporter EmrE and related cation transporters	Defense mechanisms [V]	0.56
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.56
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.56
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.56
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.56
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.56
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.56
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.01 %
Unclassified	root	N/A	25.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.01 %
Unclassified	root	N/A	25.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.01 %
Unclassified	root	N/A	25.99 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	25.99 %
Unclassified	root	N/A	25.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.26 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	25.99 %
Unclassified	root	N/A	25.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.13 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.13 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.69 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	0.56 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	25.99 %
Unclassified	root	N/A	25.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.21 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.13 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.13 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.56 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.99 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	21.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.26 %
unclassified Chromatiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales	1.13 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.56 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.56 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.99 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	20.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.26 %
Chromatiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	1.13 %
Candidatus Rokubacteria bacterium GWC2_70_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	1.13 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.56 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.99 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	20.34 %
Chromatiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	1.13 %
Candidatus Rokubacteria bacterium GWC2_70_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	1.13 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.13 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.56 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.56 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.99 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	20.34 %
Chromatiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	1.13 %
Candidatus Rokubacteria bacterium GWC2_70_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	1.13 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.13 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.56 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.56 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.56 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_F5JHDJD02FS2VH	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300000559\|F14TC_100879540	Not Available	3401	Open in IMG/M
3300000956\|JGI10216J12902_103887858	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300000956\|JGI10216J12902_104438332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1731	Open in IMG/M
3300004114\|Ga0062593_103217398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	523	Open in IMG/M
3300004463\|Ga0063356_100014166	All Organisms → cellular organisms → Bacteria → Proteobacteria	7291	Open in IMG/M
3300004463\|Ga0063356_100098583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3160	Open in IMG/M
3300005093\|Ga0062594_100087706	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300005336\|Ga0070680_100094820	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300005444\|Ga0070694_100209906	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300006049\|Ga0075417_10394417	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300006755\|Ga0079222_10232062	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300006844\|Ga0075428_100013302	All Organisms → cellular organisms → Bacteria	9154	Open in IMG/M
3300006844\|Ga0075428_100017403	All Organisms → cellular organisms → Bacteria	7945	Open in IMG/M
3300006844\|Ga0075428_101010995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300006845\|Ga0075421_100771469	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300006845\|Ga0075421_101085962	Not Available	900	Open in IMG/M
3300006845\|Ga0075421_101398895	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300006845\|Ga0075421_101635446	Not Available	699	Open in IMG/M
3300006852\|Ga0075433_10131351	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2225	Open in IMG/M
3300006852\|Ga0075433_10214921	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300006854\|Ga0075425_100366141	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300006880\|Ga0075429_100188518	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1807	Open in IMG/M
3300006904\|Ga0075424_101172939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	818	Open in IMG/M
3300006918\|Ga0079216_10443272	Not Available	834	Open in IMG/M
3300006969\|Ga0075419_10232581	Not Available	1228	Open in IMG/M
3300006969\|Ga0075419_11170515	Not Available	566	Open in IMG/M
3300009094\|Ga0111539_11105256	Not Available	921	Open in IMG/M
3300009100\|Ga0075418_10296865	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1722	Open in IMG/M
3300009147\|Ga0114129_10119834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3624	Open in IMG/M
3300009147\|Ga0114129_10339366	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300009147\|Ga0114129_10834360	Not Available	1173	Open in IMG/M
3300009147\|Ga0114129_11722551	Not Available	764	Open in IMG/M
3300009147\|Ga0114129_12855338	Not Available	573	Open in IMG/M
3300009157\|Ga0105092_10342298	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300009157\|Ga0105092_10469718	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300012202\|Ga0137363_11087034	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300012205\|Ga0137362_10629895	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300012349\|Ga0137387_10397628	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	999	Open in IMG/M
3300012349\|Ga0137387_10891656	Not Available	643	Open in IMG/M
3300012355\|Ga0137369_10353627	Not Available	1072	Open in IMG/M
3300012355\|Ga0137369_10601529	Not Available	765	Open in IMG/M
3300012358\|Ga0137368_10342902	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300012360\|Ga0137375_10238631	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300012362\|Ga0137361_10545544	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300012362\|Ga0137361_11534378	Not Available	588	Open in IMG/M
3300012582\|Ga0137358_10194094	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300012923\|Ga0137359_10980505	Not Available	726	Open in IMG/M
3300012929\|Ga0137404_10027181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4199	Open in IMG/M
3300012930\|Ga0137407_10989580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300012948\|Ga0126375_10065559	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2010	Open in IMG/M
3300015249\|Ga0180071_1069331	Not Available	549	Open in IMG/M
3300015264\|Ga0137403_10092413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3041	Open in IMG/M
3300017997\|Ga0184610_1024669	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300017997\|Ga0184610_1086570	Not Available	978	Open in IMG/M
3300017997\|Ga0184610_1169113	Not Available	723	Open in IMG/M
3300017997\|Ga0184610_1218710	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300017997\|Ga0184610_1230590	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300018027\|Ga0184605_10028947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	2273	Open in IMG/M
3300018027\|Ga0184605_10298130	Not Available	730	Open in IMG/M
3300018027\|Ga0184605_10404128	Not Available	609	Open in IMG/M
3300018027\|Ga0184605_10517862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300018028\|Ga0184608_10140216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	1036	Open in IMG/M
3300018031\|Ga0184634_10015456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2804	Open in IMG/M
3300018031\|Ga0184634_10015530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2798	Open in IMG/M
3300018031\|Ga0184634_10118124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1171	Open in IMG/M
3300018031\|Ga0184634_10287256	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300018031\|Ga0184634_10373594	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300018031\|Ga0184634_10424983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300018052\|Ga0184638_1007294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3666	Open in IMG/M
3300018052\|Ga0184638_1036061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1790	Open in IMG/M
3300018052\|Ga0184638_1085699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1155	Open in IMG/M
3300018052\|Ga0184638_1126868	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	931	Open in IMG/M
3300018052\|Ga0184638_1156518	Not Available	820	Open in IMG/M
3300018052\|Ga0184638_1188934	Not Available	729	Open in IMG/M
3300018052\|Ga0184638_1251599	Not Available	608	Open in IMG/M
3300018052\|Ga0184638_1254805	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300018053\|Ga0184626_10033540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2124	Open in IMG/M
3300018053\|Ga0184626_10213615	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300018053\|Ga0184626_10219099	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300018054\|Ga0184621_10246382	Not Available	638	Open in IMG/M
3300018056\|Ga0184623_10383601	Not Available	623	Open in IMG/M
3300018056\|Ga0184623_10398928	Not Available	606	Open in IMG/M
3300018056\|Ga0184623_10446561	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300018056\|Ga0184623_10482278	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300018059\|Ga0184615_10026859	All Organisms → cellular organisms → Bacteria	3181	Open in IMG/M
3300018059\|Ga0184615_10033893	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2828	Open in IMG/M
3300018059\|Ga0184615_10197441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1132	Open in IMG/M
3300018059\|Ga0184615_10596954	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300018061\|Ga0184619_10032744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2201	Open in IMG/M
3300018061\|Ga0184619_10163533	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300018061\|Ga0184619_10309860	Not Available	723	Open in IMG/M
3300018063\|Ga0184637_10018117	All Organisms → cellular organisms → Bacteria	4230	Open in IMG/M
3300018063\|Ga0184637_10099231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	1793	Open in IMG/M
3300018063\|Ga0184637_10714314	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300018074\|Ga0184640_10351984	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300018074\|Ga0184640_10364942	Not Available	654	Open in IMG/M
3300018074\|Ga0184640_10547703	Not Available	505	Open in IMG/M
3300018075\|Ga0184632_10030915	All Organisms → cellular organisms → Bacteria	2287	Open in IMG/M
3300018075\|Ga0184632_10093334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1317	Open in IMG/M
3300018075\|Ga0184632_10133560	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300018075\|Ga0184632_10450695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	533	Open in IMG/M
3300018076\|Ga0184609_10034224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2105	Open in IMG/M
3300018076\|Ga0184609_10084857	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300018076\|Ga0184609_10105204	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1271	Open in IMG/M
3300018076\|Ga0184609_10170521	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300018076\|Ga0184609_10231814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300018076\|Ga0184609_10307668	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300018077\|Ga0184633_10494467	Not Available	595	Open in IMG/M
3300018078\|Ga0184612_10014879	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3969	Open in IMG/M
3300018078\|Ga0184612_10030041	All Organisms → cellular organisms → Bacteria	2808	Open in IMG/M
3300018078\|Ga0184612_10055911	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300018078\|Ga0184612_10062446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1942	Open in IMG/M
3300018078\|Ga0184612_10084381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1660	Open in IMG/M
3300018078\|Ga0184612_10121955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1364	Open in IMG/M
3300018078\|Ga0184612_10131388	Not Available	1310	Open in IMG/M
3300018078\|Ga0184612_10134648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1292	Open in IMG/M
3300018078\|Ga0184612_10217990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	989	Open in IMG/M
3300018078\|Ga0184612_10266764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	882	Open in IMG/M
3300018078\|Ga0184612_10467083	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300018079\|Ga0184627_10464787	Not Available	657	Open in IMG/M
3300018079\|Ga0184627_10628686	Not Available	536	Open in IMG/M
3300018082\|Ga0184639_10037090	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300018082\|Ga0184639_10172259	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300018422\|Ga0190265_10581211	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1238	Open in IMG/M
3300018422\|Ga0190265_10990557	Not Available	962	Open in IMG/M
3300018422\|Ga0190265_11282438	Not Available	850	Open in IMG/M
3300018422\|Ga0190265_12172162	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300018422\|Ga0190265_12302877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	640	Open in IMG/M
3300018422\|Ga0190265_12458447	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300019233\|Ga0184645_1175225	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300019259\|Ga0184646_1427395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	903	Open in IMG/M
3300020018\|Ga0193721_1005382	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3335	Open in IMG/M
3300020018\|Ga0193721_1039867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1240	Open in IMG/M
3300020170\|Ga0179594_10363246	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300021073\|Ga0210378_10029284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2201	Open in IMG/M
3300021073\|Ga0210378_10162676	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300021073\|Ga0210378_10212329	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300021073\|Ga0210378_10247336	Not Available	675	Open in IMG/M
3300021080\|Ga0210382_10138593	Not Available	1037	Open in IMG/M
3300021081\|Ga0210379_10575694	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300021090\|Ga0210377_10013338	All Organisms → cellular organisms → Bacteria	6244	Open in IMG/M
3300021090\|Ga0210377_10632844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300022534\|Ga0224452_1100134	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	885	Open in IMG/M
3300022694\|Ga0222623_10094720	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300022694\|Ga0222623_10095151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1157	Open in IMG/M
3300027787\|Ga0209074_10154644	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300027873\|Ga0209814_10007795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4163	Open in IMG/M
3300027873\|Ga0209814_10391194	Not Available	611	Open in IMG/M
3300027880\|Ga0209481_10050038	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300027909\|Ga0209382_10001600	All Organisms → cellular organisms → Bacteria	35218	Open in IMG/M
3300027909\|Ga0209382_10517975	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1311	Open in IMG/M
3300028715\|Ga0307313_10059860	Not Available	1127	Open in IMG/M
3300028787\|Ga0307323_10316938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300028814\|Ga0307302_10500541	Not Available	603	Open in IMG/M
3300028819\|Ga0307296_10573675	Not Available	618	Open in IMG/M
3300028828\|Ga0307312_10944704	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300028878\|Ga0307278_10041392	Not Available	2096	Open in IMG/M
3300028878\|Ga0307278_10332839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	670	Open in IMG/M
3300030006\|Ga0299907_10083737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2598	Open in IMG/M
3300030006\|Ga0299907_10106821	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300030006\|Ga0299907_10409357	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300030006\|Ga0299907_10558998	Not Available	896	Open in IMG/M
3300030336\|Ga0247826_11696773	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300030619\|Ga0268386_10002557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13000	Open in IMG/M
3300030619\|Ga0268386_10146092	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300030619\|Ga0268386_10477405	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300030620\|Ga0302046_10068249	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300030620\|Ga0302046_10408316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	1115	Open in IMG/M
3300031229\|Ga0299913_10072010	All Organisms → cellular organisms → Bacteria → Proteobacteria	3338	Open in IMG/M
3300031421\|Ga0308194_10150212	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	717	Open in IMG/M
3300031548\|Ga0307408_101477254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300031716\|Ga0310813_10930296	Not Available	789	Open in IMG/M
3300031949\|Ga0214473_12144847	Not Available	540	Open in IMG/M
3300033550\|Ga0247829_10732240	Not Available	823	Open in IMG/M
3300034090\|Ga0326723_0193864	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300034178\|Ga0364934_0031279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1952	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.05%
Host-Associated	Host-Associated	16.95%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.15%
Terrestrial	Environmental → Terrestrial	33.90%
Plants	Host-Associated → Plants	16.95%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	42.37%
Soil	Environmental → Terrestrial → Soil	32.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.82%
Freshwater	Environmental → Aquatic → Freshwater	6.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.13%
Peat	Environmental → Terrestrial → Peat	0.56%
Floodplain	Environmental → Terrestrial → Floodplain	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	42.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.78%
Loam	Environmental → Terrestrial → Soil → Loam	1.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	42.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.13%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.13%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	40.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.04%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.13%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.56%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015249	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293A_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_00171510	2070309009	Soil	MTRLPYLLPWVRVLLLIRSITSTTWGHEAWPQVKPVLRRALEMRRQ
F14TC_1008795401	3300000559	Soil	MNQLPFLLPWVRVLLLIRSITSTDWDDTTGRLVQPLLCRSLEMCREIARDGWWN*
JGI10216J12902_1038878582	3300000956	Soil	VSDHRIPYLLPWVRVLFLIRSIPSTEWDETTGRLVQPILRRALEMRRQIAREGWWN*
JGI10216J12902_1044383322	3300000956	Soil	VSDLPYLLPWVRVLLLIRSITSTDWDDTTGRLVQPILRRALEMRRRIASDGALKLSFASALGR*
Ga0062593_1032173982	3300004114	Soil	MNQPPYLLPWVRVLIPIRAITSTTWGHELWPEVKPVLRRALETRRQIARKGWWN*
Ga0063356_1000141668	3300004463	Arabidopsis Thaliana Rhizosphere	MSQRPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALELRRQIAREGWWN*
Ga0063356_1000985834	3300004463	Arabidopsis Thaliana Rhizosphere	MNQLPYLLPWVRVLLLIRSITSTTWGHERWPHVKPLLRRALEMRRQIARDGWWN*
Ga0062594_1000877062	3300005093	Soil	MIGVSRVAYLLPWVLLLIRPLRHKSTTWGHEAWPQVKPVLRRALEMRRQIAREGWWN*
Ga0070680_1000948204	3300005336	Corn Rhizosphere	MIGVSRVAYLLPWVLLLIRPLRHKSTTWGHEAWPQVKPVLRRALEMRRQIARKGWWN*
Ga0070694_1002099064	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIGVSRVAYLLPWVLLLIRPLRHKSTTWGHEAWPQVKPVLRRALEMRRQIAREGWWN
Ga0075417_103944172	3300006049	Populus Rhizosphere	VSDLPYLLPWVRVLLLIRSITSTDWDDTTGRLAQPILRRALEMRRRIASDGAVN*
Ga0079222_102320622	3300006755	Agricultural Soil	VNQPPYLLPWVRVLLSIRSITSTTRGHELWLEVKPLLRRALEMRRQIARDGWWN*
Ga0075428_1000133029	3300006844	Populus Rhizosphere	VSTQDIKYLPYLLPYVRVLFLIHSITESDDMTGRLVQPLLRRVLEMRRQCARDGWWN*
Ga0075428_1000174037	3300006844	Populus Rhizosphere	VSTQDIRSLPFLLPWVGVLFLIRSITSTEWDDLTGRLVQPILRRTLEMRRQCARDGWWN*
Ga0075428_1010109952	3300006844	Populus Rhizosphere	VTHPTPGVRVLFLIRSITSTDWDNTTRRLVQPLLRRALEMRRQIARDGGWN*
Ga0075421_1007714691	3300006845	Populus Rhizosphere	VSTRDMRYLPYLLPWVRVLFLIRSITSTEWDEMTGRLVQPILRRALEMRSPCARDGWWN*
Ga0075421_1010859621	3300006845	Populus Rhizosphere	MAPFLLPWVRVLILIRSITSTTWGHERWPHVKPLLRRALEMRRQIAREGWWN*
Ga0075421_1013988952	3300006845	Populus Rhizosphere	VSHSPYLLPWVRMLLLIRSITSTTWGHEAWPQVKPLLRRALEMRRQIARDGWWN*
Ga0075421_1016354462	3300006845	Populus Rhizosphere	VSTQDIRYLPYLLPWVRVLFLIHSITATDWDDMTGRLVQPILRRALEMRRQIARDGWWN*
Ga0075433_101313511	3300006852	Populus Rhizosphere	VSDLPYLLPWVRVLLLIRSITSTDWDDTTGRLAQPILRRALEMRRRIASDGALN*
Ga0075433_102149214	3300006852	Populus Rhizosphere	VSTRDMRYLPYLLPWVRVLFLIRSITSTEWDEMTGRLVQPILRRALEMRSQCARDGWWN*
Ga0075425_1003661413	3300006854	Populus Rhizosphere	MRYLPYLLPWVRVLFLIRSITSTEWDEMTGRLVQPILRRALEIRSQCARDGWWN*
Ga0075429_1001885182	3300006880	Populus Rhizosphere	MRYLPYLLPWVRVLFLIRSITSTEWDEMTGRLVQPILRRALEMRSQCARDGWWN*
Ga0075424_1011729392	3300006904	Populus Rhizosphere	MNQLPYLLPWVRVLFLIRSIASTDWDDTTGRLVQPLLRHALEMRRQIARDGWWN*
Ga0079216_104432723	3300006918	Agricultural Soil	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVFRRALEMRRQIAREGCWN*
Ga0075419_102325813	3300006969	Populus Rhizosphere	VSTQDIRSLPFLLPWVGVLFLIRSITSTEWDDLTGRLVQPILRRTLEMRRQCARDGW
Ga0075419_111705151	3300006969	Populus Rhizosphere	MNQLPYLLPWVRVLFLIRSIASTDWDDTTGRLVQPLLRRALEMRRQIARDGWWN*
Ga0111539_111052561	3300009094	Populus Rhizosphere	VSDENIEYLPYLLPWVRVLFLIRSITSTEWDDLTRRLVQPLLRRALEMRRQCARGGWWN*
Ga0075418_102968651	3300009100	Populus Rhizosphere	MTSVTHPTPGVRVLFLIRSITSTDWDNTTRRLVQPLLRRALEMRRQIARDGGWN*
Ga0114129_101198344	3300009147	Populus Rhizosphere	MPYLLPWVRVLLLIRSITSTDWDDTTGRLAQPILRRALEMRRRIASDGALN*
Ga0114129_103393662	3300009147	Populus Rhizosphere	LSQVNRLPYLLPCVRVLFLIHSFTSTEWHGTAERLVQPILRRALEMRREIAREGWWN*
Ga0114129_108343602	3300009147	Populus Rhizosphere	VSNHDLRYLPYLLPWVHVLFLIHSITSTEWHGTAERLVQPILRRALEMRRQIAREGWWN*
Ga0114129_117225511	3300009147	Populus Rhizosphere	MNELRYLPYLLPWVRVLFLIESITSTEWHGTAERLVQPILRRALGMRRQIARDGWWN*
Ga0114129_128553382	3300009147	Populus Rhizosphere	VSTQDLRYLPYLLLWVRVLFLIHSITSTERHGTAERLVQPILRRALEMRRQIAREGWWN*
Ga0105092_103422983	3300009157	Freshwater Sediment	MNRGPYLLPWVRVLLLILHIRSTTWGHERWPHVKPLLRRALEMRRQIARDGWWN*
Ga0105092_104697182	3300009157	Freshwater Sediment	MTRLPYLLPWVRVLFLIRSITSTTWGHETWPLVKPLLRRALEMRRQIARDGRWN*
Ga0137363_110870341	3300012202	Vadose Zone Soil	VKATPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGGGISRLPGRL*
Ga0137362_106298952	3300012205	Vadose Zone Soil	AGGSGHRVSVPYLLPWVRVLLLICSITSTTWGREVWPGVKPVLHRALEIRRQVAREGWN*
Ga0137387_103976283	3300012349	Vadose Zone Soil	MTQPFLLPWVRVFLPIRSITDEPWPDQTWPLVQPVLRRALEMRRQIAREGWWN*
Ga0137387_108916561	3300012349	Vadose Zone Soil	MIPLPYLLPWVRVLLLIRSITSTEGDDTTGRLMQPLLHRALEMRRQIARDGW
Ga0137369_103536272	3300012355	Vadose Zone Soil	MNQLPFLLPFGTALFLIRSITSTDWNDTTGRLVLPILRRALEMHRQIPRDGWWNQTRAAAASGAR
Ga0137369_106015292	3300012355	Vadose Zone Soil	LPWVRVLLLIRSITSTTWGHEAWPEVKPLLRRALEMRRQIARDGWWN*
Ga0137368_103429023	3300012358	Vadose Zone Soil	MTQPFLLPWVRVLLLIRSITSTTWGHEVWPEVKPVLRRALEMRRQIAREGWWN*
Ga0137375_102386311	3300012360	Vadose Zone Soil	VSENRLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRVLEMRRQIARETGGGIEA*
Ga0137361_105455443	3300012362	Vadose Zone Soil	VNGLPYLPSWVRVLLSIRSITSTDWDDTTGRLVQLLLRRALEMRRQIAREGWWN*
Ga0137361_115343781	3300012362	Vadose Zone Soil	GDRVTRLPYLLPWVRVLALIRSITSTDWDDTTGRLVQPLLRRALEMHRQIARDGWWN*
Ga0137358_101940943	3300012582	Vadose Zone Soil	MTQPFLLPWVRVLLLMRSITSTDWDDTTGRLVQPLLRRALEMRRQIARDGWWN*
Ga0137359_109805052	3300012923	Vadose Zone Soil	GAGGPGDRVNGLPYLPSWVRVLLSIRSITSTDWDDTTGRLVQLLLRRALEMRRQIAREGWWN*
Ga0137404_100271815	3300012929	Vadose Zone Soil	VKATPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGGGISRLPGCL*
Ga0137407_109895801	3300012930	Vadose Zone Soil	AAAGGSGDRVNQPPYLLPWVRVLILIRSITSTDWDDTTGRLVQPLLRRALEMHRQFARDGWWN*
Ga0126375_100655591	3300012948	Tropical Forest Soil	MRYLPYLLPWVRVLFLIHSITSTDWDEMTGRLVQPILRRALEMRQQIAREGWWN*
Ga0180071_10693312	3300015249	Soil	VNHAPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPLLRHALEMRRQIAREGLSGP*
Ga0137403_100924134	3300015264	Vadose Zone Soil	MTQPFLLPWVRVLLLMRSITSTDWDDTTGRLVQPLLRRALEMHRQIARDGWWN*
Ga0184610_10246694	3300017997	Groundwater Sediment	MMQPFLLPWVRVLLLIRSITSTSWGHTAWPEVKPVRRRALEMRRQIAREGWWN
Ga0184610_10865701	3300017997	Groundwater Sediment	VNQLPYLLPWVRVLLLIRSITSATWGYEAWPEVKPVLRRALEMR
Ga0184610_11691131	3300017997	Groundwater Sediment	SGHPVKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWRN
Ga0184610_12187102	3300017997	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITATTWSHEAWPAVKPVLRRALEMR
Ga0184610_12305901	3300017997	Groundwater Sediment	AVAPAAGGSSDRVKPLPYLLPWVRILLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184605_100289475	3300018027	Groundwater Sediment	VKPLPYLLPWVRVLLLIRSITSTSWGHEAGPEVKPVLRRALEMRRQIAREGWWN
Ga0184605_102981303	3300018027	Groundwater Sediment	PWVRVLLSFRSITSTTWGHEVWPQVKPVLRRALEMRRQIAREGW
Ga0184605_104041282	3300018027	Groundwater Sediment	MNRPPYLLPWVRVLLLIRSITSTTWGLEAWPEVKPVLRRGLEMRRQIAREGWWN
Ga0184605_105178621	3300018027	Groundwater Sediment	MMQQPFLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184608_101402162	3300018028	Groundwater Sediment	LVRVLPLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184634_100154564	3300018031	Groundwater Sediment	VKPLPNLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEIRRQIAREGWWN
Ga0184634_100155303	3300018031	Groundwater Sediment	VNRLPYLLPWVRVLLLIRSITSTTWGQEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184634_101181244	3300018031	Groundwater Sediment	AKTLERSADASLPWVRVLLLIRSITSTTWGHEAWPQGKPVLRRALEMRRQIAREGWWN
Ga0184634_102872563	3300018031	Groundwater Sediment	LLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184634_103735942	3300018031	Groundwater Sediment	VDRVPYLLPWVRGLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIARDGWWN
Ga0184634_104249832	3300018031	Groundwater Sediment	MNPLPYLLPWVRVLLLIRSITSITWGHEACPEVEPLLRRALDLREQIAREGWCNYTPVA
Ga0184638_10072941	3300018052	Groundwater Sediment	MRQLPYLLPWVRVLFLIRSITSTTWGREAWPEVKPVLRRALEMPRQIALEGWWN
Ga0184638_10360611	3300018052	Groundwater Sediment	VTPLPYLLPWVRVLLLIRPITSTTWGHEAWPQVKAVLRRAMEMRRQIAREGWWN
Ga0184638_10856992	3300018052	Groundwater Sediment	MTPLLYLLPWVRVLLLIRSITSTTWGDEAWPHVKPVLRRALEMRRQIAREGWWN
Ga0184638_11268681	3300018052	Groundwater Sediment	TSCNRVTRLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALKMRRQIAREGWWN
Ga0184638_11565182	3300018052	Groundwater Sediment	MTPPFLLPWVRVLLVIRSITSTTWGHEAWPQVKPVLRRALEMSRQIARDGWSN
Ga0184638_11889341	3300018052	Groundwater Sediment	MTPPFLLPWARVLLLIRSITSTTWGHEAWPKVKPVLGRALEMRRRIAREGWWN
Ga0184638_12515991	3300018052	Groundwater Sediment	MSPLPYLLPLVRVLLLIRSITSTTWGHEAWPHVKPVLRRALEMRRQIAREGWWN
Ga0184638_12548051	3300018052	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSIRSTTSGHEAWEVKPVLRRALEMRRQIAREGWWN
Ga0184626_100335408	3300018053	Groundwater Sediment	MTPPPYLLPWVRVLLLIRSITSTTWGHEAWPEVRPVLRRALEMPRQIALEGWWN
Ga0184626_102136154	3300018053	Groundwater Sediment	MTPPFLLPWARVLLLIRSITSTTWGHEAWPDVKPVLRRALEMRRQIAREGW
Ga0184626_102190993	3300018053	Groundwater Sediment	QTTMSRLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184621_102463822	3300018054	Groundwater Sediment	VDRVPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184623_103836011	3300018056	Groundwater Sediment	MTQPFLLPWVRVLFLIRSITSTTWGHEAWPEVKPVLRRALEMRRPIAREG
Ga0184623_103989282	3300018056	Groundwater Sediment	MSPLPYLLPLVRVLLLIRSITSTTWGHEAWPEVKPVLRCALEMRQQIA
Ga0184623_104465612	3300018056	Groundwater Sediment	VNQLPYLPWLRVELLLRSITSTTWGREAWPEVKPVLRRALEMRRQIAREGWWK
Ga0184623_104822782	3300018056	Groundwater Sediment	MTRLPYLLPWVRVLLLIRSITLTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184615_100268592	3300018059	Groundwater Sediment	MNQLPYLLPWVRVLPFIRSITSTIWGHETWPEVKPVLRQALEMRRQIEREGWWN
Ga0184615_100338934	3300018059	Groundwater Sediment	MKPLPYPLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRTLEMRRQIAREGWW
Ga0184615_101974412	3300018059	Groundwater Sediment	MTQPFLLPWARVLLLIRSITSTTWGHEAWPEVKPALRRALEMRRQIAREGWWN
Ga0184615_105969542	3300018059	Groundwater Sediment	MSQLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPLIRRALEMRRQIARDGWWN
Ga0184619_100327446	3300018061	Groundwater Sediment	MTQQPFLLPWVRVLLLIRSITSTTWGYEAWPQVKPALRRALEMRRQIAREGWWN
Ga0184619_101635333	3300018061	Groundwater Sediment	VTRIPYLLPWVRVLLLIRSVTSTTWGHEAWPEAKPVLRRALEMRRQI
Ga0184619_103098601	3300018061	Groundwater Sediment	GAGACGSDDRSVTRVPFLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRSLEMRRQLAREGWWN
Ga0184637_100181178	3300018063	Groundwater Sediment	MQPFLLPWVRVLLLIRSITSTSWGHKAWPEVKPVRRRALEMRRQIAREGWWN
Ga0184637_100992313	3300018063	Groundwater Sediment	MKPLPYLLPWARVLVLIRSITSTTWGHEAWPQVKPVLRRALEMRRQIAREGWWN
Ga0184637_107143141	3300018063	Groundwater Sediment	VKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQI
Ga0184640_103519842	3300018074	Groundwater Sediment	MNPLPYLLPWVRVLLLIRSITSITWGHEACPEVEPLLRRALEVRQQIAREGWWN
Ga0184640_103649422	3300018074	Groundwater Sediment	VKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRREIARDGWWN
Ga0184640_105477032	3300018074	Groundwater Sediment	KPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRQQIAREG
Ga0184632_100309153	3300018075	Groundwater Sediment	MKRLPYLLPWVRVLLLIRSITSTTWGHDAWPEVKPVLRRALEMRRQIARDGWWKRKGWPWPSM
Ga0184632_100933344	3300018075	Groundwater Sediment	MMQPFLLPWVRVLLLIRSITSTTWGREAWPEVKPVLRRALEMPRQIALEGWWN
Ga0184632_101335602	3300018075	Groundwater Sediment	MSRPYLLLWVRVLLLIRSITSTTWGHEVWPEVKPVLRRALEMRRQIAREGWWN
Ga0184632_104506951	3300018075	Groundwater Sediment	VTRLPYLLPWVRLLLLIRSITSTTWGHETWPEVKPVLRRALEMRRQIAREGWWN
Ga0184609_100342242	3300018076	Groundwater Sediment	VKPLPYLLPWVRVLLLIRSIRSTTWGHEAWPDVKRVLRRALAMRRQIALGGWWNYTRRPA
Ga0184609_100848573	3300018076	Groundwater Sediment	MSPLPYLLPLVRVLLLIRSITSTTWGHEAWPEVKPVLRCALEMRQQIAREGWWN
Ga0184609_101052043	3300018076	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITSTTSGHEASELKPVLRRALEMRRQIAREGWWN
Ga0184609_101705212	3300018076	Groundwater Sediment	RLPYLLPWVRVLLLIRSITSTTCEAWPEVKPLLRRALEMRRQIARDGWWN
Ga0184609_102318142	3300018076	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184609_103076681	3300018076	Groundwater Sediment	MNRPPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRQQIARDGWWN
Ga0184633_104944671	3300018077	Groundwater Sediment	VKPLLYLLPWVRVLLLIRSITSTTWGPEAWPEVKPVLRRALEMHRQIAREGWWN
Ga0184612_100148795	3300018078	Groundwater Sediment	LLPWVRVLLLIRSITSTTWGHEAWPQVKPVLRRALEMRRQIAREGWWN
Ga0184612_100300411	3300018078	Groundwater Sediment	MTQPFLLPWVRVLLLIRSITSTTWGHEAWPHVKPVLRRSLEMRRQIAREGWWN
Ga0184612_100559114	3300018078	Groundwater Sediment	VKLLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPLLRRALEMRRQIAREGWWN
Ga0184612_100624463	3300018078	Groundwater Sediment	LLPWARVLLLIRSITSTTWGHEAWPKVKPVLGRALEMRRRIAREGWWN
Ga0184612_100843812	3300018078	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALKMRRQIAREGWWN
Ga0184612_101219551	3300018078	Groundwater Sediment	MTPLLYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREG
Ga0184612_101313882	3300018078	Groundwater Sediment	MTQPFLLPWVRVLLLIRSITSTIWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184612_101346482	3300018078	Groundwater Sediment	MTQPFLLPWVRVLLLIRSITSTTSGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184612_102179902	3300018078	Groundwater Sediment	MSLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPLLRRALEMRRQIAREGWWN
Ga0184612_102667641	3300018078	Groundwater Sediment	RMKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0184612_104670832	3300018078	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPQVKPVLRRALEMRRQIAREGWWN
Ga0184627_104647871	3300018079	Groundwater Sediment	VKPLPYLLPWVRVLLLIRSITSTTWGHEARPDVKPVLRRALEMRRQIACEGWWN
Ga0184627_106286861	3300018079	Groundwater Sediment	VSESGLPFLLPWVRVLLLIRSITSTTWGQEAWPEVKPVLRRALEMRRQIAREGWN
Ga0184639_100370904	3300018082	Groundwater Sediment	MMQPFLLPWVRVLLLIRSITSTSWGHKAWPEVKPVRRRALEMRRQIAREGWWN
Ga0184639_101722592	3300018082	Groundwater Sediment	VKPLLYLLPWVRVLLLIRSITSTTWGPEAWPEVKPVLRRALEMHRQIA
Ga0190265_105812113	3300018422	Soil	MSRPYLLPWVRVLLLIRSITSTTWGHEAWPQMKPVLRRALQMRRQIARDGWWN
Ga0190265_109905571	3300018422	Soil	MMQPFLLPWVRVLFLIRSIRSTTWGHEAWPEVKPLLRRALEMRRQIARDGWWN
Ga0190265_112824382	3300018422	Soil	MKPLPYLLPWVRVLLLIRSITSTTWGHKAWPEVKPELRRALEMRRQIAQEGRWN
Ga0190265_121721621	3300018422	Soil	MTQPFLFPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0190265_123028772	3300018422	Soil	PPWVRVLLFICSITATTWGREAWPEVKPVLRRALEMRRQIARDGWLDLPRFGRHLG
Ga0190265_124584472	3300018422	Soil	FPPWVRVLLLIRSITSTTSGHEAWPEVKPLLRRALEMRRQIARDGWWN
Ga0184645_11752251	3300019233	Groundwater Sediment	VTPLPYLLPWVRVLLLIRSITSTTCGHEAWPQVKPVLRRALEMRRQIAREGWWN
Ga0184646_14273951	3300019259	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWEVKPVLRRALEMRRQIAREGWWN
Ga0193721_10053823	3300020018	Soil	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALAMRRQIAREGWWN
Ga0193721_10398674	3300020018	Soil	MNRPPYLLPWVRVLLLIRSVTLTKWGHEVWPQVKPVPRRALEMRRQIAREGW
Ga0179594_103632462	3300020170	Vadose Zone Soil	VNGLPYLPSWVRVLLSIRSITSTDWDDTTGRLVQLLLRRALEMRRQIAREGWWN
Ga0210378_100292843	3300021073	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITSTTSGHEAWEVKPVLRRALEMRRQIAREGWWN
Ga0210378_101626762	3300021073	Groundwater Sediment	MTRLPYLLPWVRVLLLIRSITSTTCEAWPEVKPLLRRALEMRRQIARDGWWN
Ga0210378_102123291	3300021073	Groundwater Sediment	MTPPFLLPWARVLLLIRSITSTTWGHEAWPKVKPVLGRALEQIAREGWWN
Ga0210378_102473361	3300021073	Groundwater Sediment	PFLHPWVRVLLLIRSITSTTWGHDAWPEVKPVLRRALERRRQIAREGWWN
Ga0210382_101385933	3300021080	Groundwater Sediment	PPYLLPWVRVLLLIRSVALTKWGHEVWSQAKPVPRRALEMRRQIAREGW
Ga0210379_105756942	3300021081	Groundwater Sediment	VKPLPYLLPWVRVLLLIRSITSTTLGHEAWPEVKPVLRRALEMRRKIAREGWWN
Ga0210377_100133381	3300021090	Groundwater Sediment	MKPLPYPLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRTLEMRRQIAREGWWN
Ga0210377_106328441	3300021090	Groundwater Sediment	QPFLLPWARVLLLIRSITSTTWGHEAWPEVKPALRRALEMRRQIAREGWWN
Ga0224452_11001342	3300022534	Groundwater Sediment	MKPLPYLLPWVRVLLLIRSITSTTWGHKAWEVKPVLRRALEMRRQIAREGWWN
Ga0222623_100947202	3300022694	Groundwater Sediment	VVRVLLLIRSITATTWGHEAWPAVKPVLRRALEMRRQIAQEGWWN
Ga0222623_100951512	3300022694	Groundwater Sediment	MTRLPFLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0209074_101546441	3300027787	Agricultural Soil	VNQPPYLLPWVRVLLSIRSITSTTRGHELWLEVKPLLRRALEMRRQIARDGWWN
Ga0209814_100077954	3300027873	Populus Rhizosphere	MRYLPYLLPWVRVLFLIRSITSTEWDEMTGRLVQPILRRALEMRSQCARDGWWN
Ga0209814_103911942	3300027873	Populus Rhizosphere	VSDLPYLLPWVRVLLLIRSITSTDWDDTTGRLAQPILRRALEMRRRIASDGALN
Ga0209481_100500382	3300027880	Populus Rhizosphere	VSTQDIKYLPYLLPYVRVLFLIHSITESDDMTGRLVQPLLRRVLEMRRQCARDGWWN
Ga0209382_1000160012	3300027909	Populus Rhizosphere	VSTQDIRSLPFLLPWVGVLFLIRSITSTEWDDLTGRLVQPILRRTLEMRRQCARDGWWN
Ga0209382_105179751	3300027909	Populus Rhizosphere	MAPFLLPWVRVLILIRSITSTTWGHERWPHVKPLLRRALEMRRQIAREGWWN
Ga0307313_100598602	3300028715	Soil	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPQVKPVLQRALEMRRQIAREGWWN
Ga0307323_103169382	3300028787	Soil	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWLDLPRFGRYLG
Ga0307302_105005411	3300028814	Soil	QPFLLPWVRVLLLIRSITSATWGHEAWPQVKPVLRRTLEMRRQIARDGWWN
Ga0307296_105736751	3300028819	Soil	AGGSGHPVTRLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWW
Ga0307312_109447042	3300028828	Soil	MSHLPYLLPWVRVMLLIRSITSTEWDQRTWALVQPVLCRAVEMRRQIARD
Ga0307278_100413924	3300028878	Soil	MNQLPYLLPWARVLLLIRAITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWN
Ga0307278_103328392	3300028878	Soil	LVRVLPLIRSITSTTWGHEAWPEVKPVLRRALEMRLQIAREGWWN
Ga0299907_100837372	3300030006	Soil	MQPFLLPWVRVLLLIRDIRSTTWGHERWPHVKPLLRRALEMRRQLARDGWWN
Ga0299907_101068212	3300030006	Soil	MSQRPYLLPWVRVPLLIRDIRSTTWVTRRGRLVKPLLRRALEMRRQIARDGWWN
Ga0299907_104093572	3300030006	Soil	MQPFLLPWVRVLVLIRDIRSTQWGHERWPQVKPLLRQALEMRRQIARDGWWN
Ga0299907_105589982	3300030006	Soil	MTRLPYLLPWVRVLFLIRSITSTTWGHETWPLVKPLLRRALEMRRQIARDGRWN
Ga0247826_116967732	3300030336	Soil	VTHPTPGVRVLFLIRSITSTDWDNTTRRLVQPLLRRALEMRRQIARDGGWN
Ga0268386_100025573	3300030619	Soil	LNELPFLLPWVRVLLLIRSITSTTWGHEAWPEVKPVLRRALEMRRQIAREGWWT
Ga0268386_101460921	3300030619	Soil	MQPFLLPWVRVLVLIRDIRSTTWGHERWPLVKPLLRRALEMRRQIARDGWWN
Ga0268386_104774052	3300030619	Soil	MSQRPYLLPWVRVLLLIRDIRSTTWGHERWPHVKPLLRRAFDMRRRQIARDG
Ga0302046_100682493	3300030620	Soil	MQPFLLPWVRVLLLIRDIRSTTWGHERWPLEKPLHRRALEMRRQIARDGWWN
Ga0302046_104083161	3300030620	Soil	MQPFLLPWVRVMLIRDIRSTTWGHERWPLVKPLLRRALEMRRQIAREGWWN
Ga0299913_100720107	3300031229	Soil	MQPFLLPWVRVLLLIRDIRSTTWGHERWPLVKPLLRRALEMRRQIARDG
Ga0308194_101502122	3300031421	Soil	MTSVNQPPYLLPWVRVLLLIRSITSTTWGHEAWPQVKPVLRRVLELRRQIAREGWWN
Ga0307408_1014772542	3300031548	Rhizosphere	MSQRPYLLPWVRVLLLICDIRSTTWGHERWPQVKPLLRRALEMRRRDGWWN
Ga0310813_109302961	3300031716	Soil	IPIVPWVRVLILIRSITSTTWGHELWPEVKPVLRRALEMRRQIARDGWWN
Ga0214473_121448472	3300031949	Soil	VNQLPYLLPWVRVLLLIGSITSTTCGHEAWPQVKPVLRRALKMRRQIASEGWWS
Ga0247829_107322401	3300033550	Soil	VTHPTPGVRVLFLIRSITSTDWDNTTRRLVQPLLRRALEMR
Ga0326723_0193864_320_481	3300034090	Peat Soil	MKPLPYLLPWVRVLLLIRSITSTTWGHEVWPEVKPVLRRALEMRRQIAREGCT
Ga0364934_0031279_1442_1606	3300034178	Sediment	MKPLPYLLPWVRVLLLIRSITSTTWGHEAWPEVKPLLRRALEMRRQIAREGWWN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033388

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences