Metagenome / Metatranscriptome Family F033347

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033347
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	65 residues
Representative Sequence	CSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAMAALAGQRAAV
Number of Associated Samples	124
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.34 %
% of genes near scaffold ends (potentially truncated)	92.09 %
% of genes from short scaffolds (< 2000 bps)	90.96 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.887 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.458 % of family members)
Environment Ontology (ENVO)	Unclassified (59.322 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.29% β-sheet: 0.00% Coil/Unstructured: 38.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d1nfva_	1nfv	0.89328
a.25.1.1: Ferritin	d4cvra_	4cvr	0.88577
a.25.1.0: automated matches	d5hjfa_	5hjf	0.88471
a.2.6.1: HR1 repeat	d1cxzb_	1cxz	0.88383
a.25.1.1: Ferritin	d3ka8a_	3ka8	0.88176

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF00106	adh_short	15.82
PF06736	TMEM175	2.26
PF06210	DUF1003	1.69
PF02909	TetR_C_1	1.69
PF07690	MFS_1	1.69
PF00589	Phage_integrase	1.13
PF00018	SH3_1	0.56
PF01370	Epimerase	0.56
PF02577	BFN_dom	0.56
PF13669	Glyoxalase_4	0.56
PF01988	VIT1	0.56
PF08240	ADH_N	0.56
PF00498	FHA	0.56
PF00296	Bac_luciferase	0.56
PF11941	DUF3459	0.56
PF00485	PRK	0.56
PF03992	ABM	0.56
PF03176	MMPL	0.56
PF00378	ECH_1	0.56
PF01494	FAD_binding_3	0.56
PF04024	PspC	0.56
PF00440	TetR_N	0.56
PF01145	Band_7	0.56
PF13561	adh_short_C2	0.56
PF12831	FAD_oxidored	0.56
PF00072	Response_reg	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	2.26
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	1.69
COG4420	Uncharacterized membrane protein	Function unknown [S]	1.69
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.13
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.56
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.56
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.56
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.56
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.56
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.56
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.56
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.56
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
All Organisms	root	All Organisms	40.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
cellular organisms	root	All Organisms → cellular organisms	40.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.55 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.16 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17.51 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.73 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5.65 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.82 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.56 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	5.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.82 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.56 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.56 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Rothia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia	5.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.82 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.56 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.56 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.89 %
Rothia dentocariosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	5.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.82 %
Microbacterium luticocti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium luticocti	0.56 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.56 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402JCC3M	Not Available	513	Open in IMG/M
3300002914\|JGI25617J43924_10133163	Not Available	867	Open in IMG/M
3300004152\|Ga0062386_100933851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300004479\|Ga0062595_100513138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300004479\|Ga0062595_101536997	Not Available	616	Open in IMG/M
3300004633\|Ga0066395_10468286	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005332\|Ga0066388_103264800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	829	Open in IMG/M
3300005434\|Ga0070709_11096704	Not Available	636	Open in IMG/M
3300005435\|Ga0070714_101643566	Not Available	627	Open in IMG/M
3300005435\|Ga0070714_101944858	All Organisms → cellular organisms → Bacteria → Terrabacteria group	574	Open in IMG/M
3300005436\|Ga0070713_101317742	Not Available	700	Open in IMG/M
3300005548\|Ga0070665_100081451	All Organisms → cellular organisms → Bacteria	3243	Open in IMG/M
3300005564\|Ga0070664_100447768	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300005764\|Ga0066903_101697555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	1202	Open in IMG/M
3300005892\|Ga0075275_1100159	Not Available	508	Open in IMG/M
3300006806\|Ga0079220_10400949	Not Available	896	Open in IMG/M
3300006893\|Ga0073928_10297342	Not Available	1214	Open in IMG/M
3300006954\|Ga0079219_10983517	Not Available	697	Open in IMG/M
3300006954\|Ga0079219_11855880	Not Available	567	Open in IMG/M
3300009090\|Ga0099827_10643003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300009137\|Ga0066709_102788193	Not Available	649	Open in IMG/M
3300010048\|Ga0126373_11455385	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010048\|Ga0126373_11471084	Not Available	747	Open in IMG/M
3300010048\|Ga0126373_11794736	Not Available	677	Open in IMG/M
3300010343\|Ga0074044_10231882	Not Available	1222	Open in IMG/M
3300010358\|Ga0126370_10303810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300010358\|Ga0126370_11262323	Not Available	690	Open in IMG/M
3300010358\|Ga0126370_12008545	Not Available	565	Open in IMG/M
3300010359\|Ga0126376_10674205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300010360\|Ga0126372_11184720	Not Available	787	Open in IMG/M
3300010361\|Ga0126378_10191110	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300010361\|Ga0126378_10481795	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300010361\|Ga0126378_10791653	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300010361\|Ga0126378_13412786	Not Available	504	Open in IMG/M
3300010366\|Ga0126379_10195683	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300010366\|Ga0126379_10800807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300010366\|Ga0126379_12077083	Not Available	670	Open in IMG/M
3300010376\|Ga0126381_100098226	All Organisms → cellular organisms → Bacteria	3731	Open in IMG/M
3300010376\|Ga0126381_101585003	Not Available	946	Open in IMG/M
3300010376\|Ga0126381_104556904	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300010379\|Ga0136449_102028803	Not Available	848	Open in IMG/M
3300010398\|Ga0126383_11870172	Not Available	688	Open in IMG/M
3300010398\|Ga0126383_12534444	Not Available	597	Open in IMG/M
3300010876\|Ga0126361_10818496	Not Available	526	Open in IMG/M
3300011270\|Ga0137391_10602155	Not Available	921	Open in IMG/M
3300012198\|Ga0137364_10255712	Not Available	1295	Open in IMG/M
3300012198\|Ga0137364_11327859	Not Available	535	Open in IMG/M
3300012209\|Ga0137379_10051671	All Organisms → cellular organisms → Bacteria	3958	Open in IMG/M
3300012285\|Ga0137370_10204494	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300012971\|Ga0126369_10066816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3136	Open in IMG/M
3300015372\|Ga0132256_101110962	Not Available	905	Open in IMG/M
3300015373\|Ga0132257_101835280	Not Available	779	Open in IMG/M
3300015374\|Ga0132255_101552795	Not Available	1002	Open in IMG/M
3300016270\|Ga0182036_11439645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300016319\|Ga0182033_10203628	Not Available	1576	Open in IMG/M
3300016319\|Ga0182033_10595970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	959	Open in IMG/M
3300016341\|Ga0182035_11498741	Not Available	607	Open in IMG/M
3300016371\|Ga0182034_11230041	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300016387\|Ga0182040_10801666	All Organisms → cellular organisms → Bacteria → Terrabacteria group	776	Open in IMG/M
3300016387\|Ga0182040_11821213	Not Available	521	Open in IMG/M
3300016445\|Ga0182038_11429780	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300017942\|Ga0187808_10145903	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1041	Open in IMG/M
3300017955\|Ga0187817_10903509	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300017975\|Ga0187782_10811626	Not Available	724	Open in IMG/M
3300019887\|Ga0193729_1187798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	716	Open in IMG/M
3300021403\|Ga0210397_10163525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1565	Open in IMG/M
3300021559\|Ga0210409_10742689	Not Available	853	Open in IMG/M
3300021560\|Ga0126371_10471918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium luticocti	1402	Open in IMG/M
3300021560\|Ga0126371_10586398	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300021560\|Ga0126371_11563460	Not Available	786	Open in IMG/M
3300021560\|Ga0126371_12570430	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300021560\|Ga0126371_13451001	Not Available	534	Open in IMG/M
3300025906\|Ga0207699_10455350	Not Available	918	Open in IMG/M
3300025945\|Ga0207679_10708063	Not Available	914	Open in IMG/M
3300025961\|Ga0207712_10498971	Not Available	1040	Open in IMG/M
3300026317\|Ga0209154_1246369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	625	Open in IMG/M
3300027568\|Ga0208042_1048457	Not Available	1087	Open in IMG/M
3300028381\|Ga0268264_11662406	Not Available	649	Open in IMG/M
3300029943\|Ga0311340_10008520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13396	Open in IMG/M
3300030494\|Ga0310037_10370120	Not Available	598	Open in IMG/M
3300031549\|Ga0318571_10116723	Not Available	891	Open in IMG/M
3300031561\|Ga0318528_10678704	Not Available	552	Open in IMG/M
3300031564\|Ga0318573_10626189	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031573\|Ga0310915_11158999	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031668\|Ga0318542_10552462	Not Available	600	Open in IMG/M
3300031679\|Ga0318561_10062118	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1896	Open in IMG/M
3300031679\|Ga0318561_10441950	Not Available	715	Open in IMG/M
3300031679\|Ga0318561_10630663	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031680\|Ga0318574_10491284	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300031680\|Ga0318574_10778088	Not Available	561	Open in IMG/M
3300031682\|Ga0318560_10138886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1281	Open in IMG/M
3300031723\|Ga0318493_10602421	Not Available	612	Open in IMG/M
3300031747\|Ga0318502_10677496	Not Available	623	Open in IMG/M
3300031748\|Ga0318492_10360490	Not Available	762	Open in IMG/M
3300031748\|Ga0318492_10686031	Not Available	548	Open in IMG/M
3300031751\|Ga0318494_10338868	Not Available	869	Open in IMG/M
3300031763\|Ga0318537_10052380	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1483	Open in IMG/M
3300031764\|Ga0318535_10061015	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300031765\|Ga0318554_10162724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1268	Open in IMG/M
3300031768\|Ga0318509_10614933	Not Available	605	Open in IMG/M
3300031768\|Ga0318509_10751147	Not Available	540	Open in IMG/M
3300031769\|Ga0318526_10484768	Not Available	505	Open in IMG/M
3300031770\|Ga0318521_10421379	Not Available	797	Open in IMG/M
3300031770\|Ga0318521_10473318	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031770\|Ga0318521_10751362	Not Available	593	Open in IMG/M
3300031771\|Ga0318546_10439519	Not Available	913	Open in IMG/M
3300031782\|Ga0318552_10301876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	814	Open in IMG/M
3300031782\|Ga0318552_10383249	Not Available	716	Open in IMG/M
3300031792\|Ga0318529_10126984	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1165	Open in IMG/M
3300031796\|Ga0318576_10434077	Not Available	620	Open in IMG/M
3300031799\|Ga0318565_10258024	Not Available	848	Open in IMG/M
3300031805\|Ga0318497_10322967	Not Available	861	Open in IMG/M
3300031819\|Ga0318568_10781894	Not Available	592	Open in IMG/M
3300031821\|Ga0318567_10073320	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1813	Open in IMG/M
3300031821\|Ga0318567_10523608	Not Available	673	Open in IMG/M
3300031831\|Ga0318564_10349917	Not Available	649	Open in IMG/M
3300031832\|Ga0318499_10331952	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031833\|Ga0310917_10314808	Not Available	1060	Open in IMG/M
3300031833\|Ga0310917_11031385	Not Available	551	Open in IMG/M
3300031845\|Ga0318511_10245739	Not Available	803	Open in IMG/M
3300031845\|Ga0318511_10531029	Not Available	546	Open in IMG/M
3300031846\|Ga0318512_10457301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300031860\|Ga0318495_10351071	Not Available	653	Open in IMG/M
3300031879\|Ga0306919_10763811	Not Available	744	Open in IMG/M
3300031879\|Ga0306919_11528147	Not Available	502	Open in IMG/M
3300031890\|Ga0306925_10861093	Not Available	935	Open in IMG/M
3300031896\|Ga0318551_10566889	Not Available	654	Open in IMG/M
3300031896\|Ga0318551_10574476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300031896\|Ga0318551_10889457	Not Available	519	Open in IMG/M
3300031897\|Ga0318520_10027570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2800	Open in IMG/M
3300031897\|Ga0318520_10966082	Not Available	537	Open in IMG/M
3300031910\|Ga0306923_10149489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2665	Open in IMG/M
3300031910\|Ga0306923_11723546	Not Available	646	Open in IMG/M
3300031910\|Ga0306923_12480534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300031912\|Ga0306921_11465548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	748	Open in IMG/M
3300031912\|Ga0306921_11730996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	675	Open in IMG/M
3300031912\|Ga0306921_12007266	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031941\|Ga0310912_10233941	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1411	Open in IMG/M
3300031942\|Ga0310916_10971178	Not Available	710	Open in IMG/M
3300031942\|Ga0310916_10971623	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300031945\|Ga0310913_10329847	Not Available	1079	Open in IMG/M
3300031945\|Ga0310913_10685946	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031947\|Ga0310909_10812042	Not Available	772	Open in IMG/M
3300031954\|Ga0306926_10771414	Not Available	1161	Open in IMG/M
3300032001\|Ga0306922_11774112	Not Available	608	Open in IMG/M
3300032001\|Ga0306922_12147691	Not Available	540	Open in IMG/M
3300032009\|Ga0318563_10531954	Not Available	635	Open in IMG/M
3300032039\|Ga0318559_10274489	Not Available	781	Open in IMG/M
3300032041\|Ga0318549_10049415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1731	Open in IMG/M
3300032041\|Ga0318549_10166736	Not Available	984	Open in IMG/M
3300032041\|Ga0318549_10436319	Not Available	590	Open in IMG/M
3300032042\|Ga0318545_10350170	Not Available	532	Open in IMG/M
3300032043\|Ga0318556_10489917	Not Available	643	Open in IMG/M
3300032059\|Ga0318533_10399876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	1003	Open in IMG/M
3300032060\|Ga0318505_10570986	Not Available	532	Open in IMG/M
3300032065\|Ga0318513_10311778	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300032066\|Ga0318514_10761980	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300032067\|Ga0318524_10547785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300032068\|Ga0318553_10566307	Not Available	595	Open in IMG/M
3300032068\|Ga0318553_10743592	Not Available	513	Open in IMG/M
3300032068\|Ga0318553_10769862	Not Available	503	Open in IMG/M
3300032076\|Ga0306924_10182123	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2411	Open in IMG/M
3300032089\|Ga0318525_10211361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300032090\|Ga0318518_10087306	Not Available	1542	Open in IMG/M
3300032091\|Ga0318577_10044714	Not Available	1967	Open in IMG/M
3300032094\|Ga0318540_10087358	Not Available	1453	Open in IMG/M
3300032261\|Ga0306920_103320118	Not Available	599	Open in IMG/M
3300032261\|Ga0306920_103410992	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300033289\|Ga0310914_10011905	All Organisms → cellular organisms → Bacteria	6489	Open in IMG/M
3300033289\|Ga0310914_11032270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia dentocariosa	723	Open in IMG/M
3300033290\|Ga0318519_10554744	Not Available	695	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.48%
Host-Associated	Host-Associated	4.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.22%
Plants	Host-Associated → Plants	4.52%
Aquatic	Environmental → Aquatic	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.82%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.56%
Peat	Environmental → Terrestrial → Peat	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.44%
Loam	Environmental → Terrestrial → Soil → Loam	4.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.13%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.13%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.56%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.56%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_07350410	2189573004	Grass Soil	ITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAATLAGPETPA
JGI25617J43924_101331631	3300002914	Grasslands Soil	YALQRLNIIIAAYQAFLDKVRGRDDVSFALVVDLLGAEAHRRADVMAALAGP*
Ga0062386_1009338511	3300004152	Bog Forest Soil	CSDPRAITSYALQRLNVIIAAYQDFLDMVRGRDDVSFALVVSLLGAETHRRADVQAAMAGHGPAA*
Ga0062595_1005131382	3300004479	Soil	APGEAGFTIPDCSDPRAIISYALHRLDVIIAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVPA*
Ga0062595_1015369971	3300004479	Soil	QEGISGLQRLAITDVYHEFLDKVRARDDVSLALIVKLLGAETHRRADIEAVLAKGP*
Ga0066395_104682863	3300004633	Tropical Forest Soil	DPRAITTYALERLTIIIDAYQQFLDKIRGRDDVSFALVVGLLAAEQHRRADVVAALAGQ*
Ga0066388_1032648002	3300005332	Tropical Forest Soil	LDRAPGGTEFTIPDCSDPRAIISYALQRLNVIIAAYQDFLDRVRGRDDVSFALVVGLLAAEAHRRADIEAALAGQPAPA*
Ga0070709_110967042	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RAPGNYEFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRKADVAAALAGQETPA*
Ga0070714_1016435662	3300005435	Agricultural Soil	SDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVVAALAVQETPA*
Ga0070714_1019448582	3300005435	Agricultural Soil	SYALDRLNVVITAYEAFLDTVRGRDDVSFALVVRLLAAEARRRADVVAALAGQRADA*
Ga0070713_1013177422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NEFAIPDCSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADVMAALAGSKVPA*
Ga0070665_1000814511	3300005548	Switchgrass Rhizosphere	PGNYEFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVVAALAVQETPA*
Ga0070664_1004477681	3300005564	Corn Rhizosphere	ITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVVAALAVQETPA*
Ga0066903_1016975551	3300005764	Tropical Forest Soil	EFTIPDCSDPRAIISYALQRLNVIIAAYQDFLDRVRGRDDVSFALVVGLLAAEAHRRADIEAALAGQPAPA*
Ga0075275_11001592	3300005892	Rice Paddy Soil	AVQRLEVIIAAYQEFLDKVRGRDDVSFALVVGLLAAETRRRADARAALAGQETPA*
Ga0079220_104009492	3300006806	Agricultural Soil	PGEAEFTIPDCSDPQAIISYAVHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAMAALAGQRVPA*
Ga0073928_102973422	3300006893	Iron-Sulfur Acid Spring	YAVQRLTIIITAYQAFLDTIRGHDDVSFALVVGLLAAETHRRADAEAALAQPPA*
Ga0079219_109835171	3300006954	Agricultural Soil	FTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALAVQETPA*
Ga0079219_118558801	3300006954	Agricultural Soil	DPRAIISYALHRLDVIITAYQAFLDKVRGRDNVSFALVVGLLAAEAHRRADAVAALAGQRAAA*
Ga0099827_106430031	3300009090	Vadose Zone Soil	PRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALAGQETPA*
Ga0066709_1027881932	3300009137	Grasslands Soil	AITSYALQRLNVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALARQETPA
Ga0126373_114553852	3300010048	Tropical Forest Soil	TAPRGDTEFTIPDCSDPRAIASYALKRLDVIIAAYQAFLDKVRGRDDVSFALVVGLLGAEAHRRADVMAALAGQ*
Ga0126373_114710843	3300010048	Tropical Forest Soil	EFTIPDCSDPRAIISYARERLDAIIAAYQAFLDQVRGHDDVSFALVVGLLAAETHRRADAAAALAGQ*
Ga0126373_117947363	3300010048	Tropical Forest Soil	PRAITTYALERLTIIIDAYQEFLDKIRGRDDVSFALVVGLLAAEQHRRADVVAALAGQ*
Ga0074044_102318821	3300010343	Bog Forest Soil	MIPDCSDPRAITSYALQRLNIIISAYQAFLERVRARDDVSFALVVKLLAAETHRRADVEAALAGGPGAAAR*
Ga0126370_103038103	3300010358	Tropical Forest Soil	YALQRLDEIIAAYQAFLDKVRAHDDVSFALVVGLLAAESHRRADIEAALASS*
Ga0126370_112623231	3300010358	Tropical Forest Soil	GTYEYTIPDCSDPRAITTYALERLTIIIDAYQEFLDKIRGRDDVSFALVVGLLAAEQHRRADVVAALAGQ*
Ga0126370_120085452	3300010358	Tropical Forest Soil	GRAPGGYEFAIPDCSDPRAITGYALQRLNEIIAAYQSFLDKVRSRDDVSFALIVRLLAAETHRRADIEAALASS*
Ga0126376_106742052	3300010359	Tropical Forest Soil	TGYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVSLLAAEAHRRADIEAALAGQPAAG*
Ga0126372_111847201	3300010360	Tropical Forest Soil	ALERLNVIIEAYQAFLDKVRGRDDVSFALVVGLLDAETHRRADVVAALAGQGAAA*
Ga0126378_101911101	3300010361	Tropical Forest Soil	ILNYALRRLDVIIAAYQAFLDAIRGRDDVSFALVVQLLAAETHRRADAIAALAGQGTAA*
Ga0126378_104817953	3300010361	Tropical Forest Soil	IPDCADPRAITSYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVSLLAAETHRRADVAAALAGPGIPA*
Ga0126378_107916533	3300010361	Tropical Forest Soil	YAIPDCSDPRAITTYALERLTIIIDAYQEFLDKIRGRDDVSFALVVGLLAAEQHRRADVVAALAGQ*
Ga0126378_134127862	3300010361	Tropical Forest Soil	YALQRLDVIIAAYQAFLDKTRGHDDVSFALIVGLLATETHRRADVAAALAGQETPA*
Ga0126379_101956832	3300010366	Tropical Forest Soil	EFTIPDCSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAMAALAGQRAAA*
Ga0126379_108008073	3300010366	Tropical Forest Soil	EFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKTRGHDDVSFALIVGLLATETHRRADVAAALAGQETPA*
Ga0126379_120770832	3300010366	Tropical Forest Soil	DPRAITSYALQRLNVIIAAYQAFLDRVRGHDDVSFALVVKLLAAETHRRADIEAALAGH*
Ga0126381_1000982265	3300010376	Tropical Forest Soil	LRRLDDIIAAYQAFLDKVRGRDDVSFALVVDLLAIEAHRRADAMAALAGPSSAP*
Ga0126381_1015850032	3300010376	Tropical Forest Soil	PDCSDPRAITGYALHRLDVIIAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADVMAALAGPPANA*
Ga0126381_1045569041	3300010376	Tropical Forest Soil	ALHRLDVIIAAYQAFLDTVRERDDVSFALVVGLLAAEAHRRADAVAALARQPAAA*
Ga0136449_1020288032	3300010379	Peatlands Soil	LHRLDVIIVACQVFLDMMRGRDEVSFAPVAGLLAAGAHRRADAMAALAGQRVAA*
Ga0126383_118701722	3300010398	Tropical Forest Soil	PDCSDPRAITTYALHRLNVIIAAYQAFLDKVRGHDDVSFALVVGLLAAETHRRADVQAALARTTSTP*
Ga0126383_125344441	3300010398	Tropical Forest Soil	SYALQRLNIIIDAYQAFLDKVRGRDDVSFALVVGLLGAEAHRRADAAAALAGQRATA*
Ga0126361_108184961	3300010876	Boreal Forest Soil	KAITCYALQRLAVIIGAYQAFLGKVRGRDDVSFALVVELLGAETHRRADVTAALAGP*
Ga0137391_106021551	3300011270	Vadose Zone Soil	TIPDCSDPRAITTYALQRLNIIITAYQAFLDKVRGRDDVSFALVVDLLGAETHRRADVMTALAGQ*
Ga0137364_102557122	3300012198	Vadose Zone Soil	SDPRAVISYALHRLDLIIAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADVMAALAGQRAAA*
Ga0137364_113278591	3300012198	Vadose Zone Soil	NYEFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALARQETPA*
Ga0137379_100516717	3300012209	Vadose Zone Soil	LDHAPGNYEFTIPDCSDPRAIASYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALAGQETPA*
Ga0137370_102044941	3300012285	Vadose Zone Soil	GNYEFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRSDVAAALAGQETPA*
Ga0126369_100668161	3300012971	Tropical Forest Soil	IPDCSDPRAITTYALERLTIITDAYQQFLDKIRGRDDVSFALVVGLLAAEQHRRADVVAALAGQ*
Ga0132256_1011109622	3300015372	Arabidopsis Rhizosphere	DRAPGNYEFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALAVQETPA*
Ga0132257_1018352802	3300015373	Arabidopsis Rhizosphere	YEFTIPDCSDPRAITSYALQRLDVIIAAYQALLDKIRGRDDVSFALVVGLLATETHRRADVAAALAGQGTPA*
Ga0132255_1015527951	3300015374	Arabidopsis Rhizosphere	RAPGNYEFTIPDCADPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALAGQETPA*
Ga0182036_114396451	3300016270	Soil	AIISYALHRLDVIITAYQAFLDRVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQ
Ga0182033_102036281	3300016319	Soil	IISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0182033_105959701	3300016319	Soil	TEFTIPDCSDPRAIISYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLLAAKAHRRAHIEAALAGQPGAA
Ga0182035_114987412	3300016341	Soil	AIVNYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLLSAEAHRRADIEAALAGQPASA
Ga0182034_112300412	3300016371	Soil	AITTYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADVAAALAGPGIPA
Ga0182040_108016661	3300016387	Soil	GTEFTIPDCSDPRAIISYALDRLDVIITAYQAFLDTVRGQDDVSFALVVGLLAAEAHRRADIMAALARQRVAG
Ga0182040_118212132	3300016387	Soil	DCSDPRAITSYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLPAAETHRRADIEAALAGQPTEA
Ga0182038_114297801	3300016445	Soil	PDCADPRAITTYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADVAAALAGPGIPA
Ga0187808_101459031	3300017942	Freshwater Sediment	AITSYALHRLEVIIAAHQPFLNKVRGRDDVSFALVVGLLATEQHRRADIQAALARQ
Ga0187817_109035091	3300017955	Freshwater Sediment	RLNGIIAAYQDFLDMVRGADDVSFALVVGLLGAETHRRADVQAAMAGHGPAA
Ga0187782_108116261	3300017975	Tropical Peatland	DCSDPHAIVSYALHRLNVIIAAYQAFLDQVRGRDDVSFALVVKLLGAETHRRADARAALAGQAAGS
Ga0193729_11877981	3300019887	Soil	MTSPELTVQDVIDDLGSGDEEFTIPDCSDPRAIASYAPHRLDVIIAAYQAFLDKVRGRDDVSFALVVGLLAAETHRRADVRAALAGQ
Ga0210397_101635253	3300021403	Soil	FTIPDCSDPRAIVTYAVQRLNIIITAYQAFLDKIRGHDDVSFRAGRRLLAAEIHRRADAEAALAQPAISQTGL
Ga0210409_107426893	3300021559	Soil	NEFTIPDCSDPRAIITYALQRLDIIISAYQAFLDKVRGGDDVSFALVVGLLGAEHHRRADVKAALAM
Ga0126371_104719181	3300021560	Tropical Forest Soil	DTEFTIPDCSDPRAIISYALHRLDVIITAYQAFLDTVRERDDVSFALVVGLLAAEAHRRADAVAALAGS
Ga0126371_105863983	3300021560	Tropical Forest Soil	PDCSDPRAITTYALERLTIIIDAYQEFLDKIRGRDDVSFALVVGLLAAEQHRRADVVAALAGQ
Ga0126371_115634601	3300021560	Tropical Forest Soil	TEFTIPDCSDPRAIIGYALRSLDDIIAAYQAFLDKVRGRDEVSFALVVELLAIEAHRRADAMAALAGPSSAP
Ga0126371_125704302	3300021560	Tropical Forest Soil	TYEYAIPDCSDPRAITTYALERLTIIIDAYQEFLDKIRGRDDVSFALVVGLLAAEQHRRADVIAALAGQ
Ga0126371_134510011	3300021560	Tropical Forest Soil	GTYEYAIPDCSDPRAITTYALERLTIIIDAYQEFLDKIRGRDDVSFALVVGLLAAEQHRRADVVAALAGQ
Ga0207699_104553501	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DRAPGNYEFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVVAALAVQETPA
Ga0207679_107080631	3300025945	Corn Rhizosphere	ITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVVAALAVQETPA
Ga0207712_104989711	3300025961	Switchgrass Rhizosphere	IPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVVAALAVQETPA
Ga0209154_12463692	3300026317	Soil	TIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVAAALARQETPA
Ga0208042_10484571	3300027568	Peatlands Soil	YALQCLNVIIAAYQAFLDMVRGRDDVSFALVVGLLGTETHRRADVTAALAGQ
Ga0268264_116624061	3300028381	Switchgrass Rhizosphere	LEFTIPDCSDPRAITSYALQRLDVIIAAYQAFLDKIRGRDDVSFALVVGLLATETHRRADVVAALAVQETPA
Ga0311340_100085201	3300029943	Palsa	IPDCSNPRAITSYALHRLDAIIAAYQAFLDKVRGRDDVSFALVVGLLGAETHRRADVRAALAGH
Ga0310037_103701201	3300030494	Peatlands Soil	DNEFTIPDCSDPRAITCYALQCLNVIIAAYQAFLDMVRGRDDVSFALVVGLLGTETHRRADVTAALAGQ
Ga0318571_101167233	3300031549	Soil	LTAPCDVEFTIPDCSSPQAIARYALHRLDIIIDAYQTLLDKVRGRDDVSFALVVDLLAAETHRRADVIAALARS
Ga0318528_102120162	3300031561	Soil	VAGYARHRLDIIIGACQTLLDKVRGRDDVSFALVAGLLAAETRRRAGVIAALA
Ga0318528_106787041	3300031561	Soil	TIPDCSDPRAIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0318573_106261892	3300031564	Soil	CSDPRAIVTYGLQRLNTIIDAYQDFLDKIRGRDDVSFALVVGLLAAETHRRADIIAALAG
Ga0310915_111589991	3300031573	Soil	LIDRAPGDVEFTIPDCSSPRAIASYALHRLDIIIDAYQTLLDKVRGCDDVTFALVVDLLAAETHRRADVAAALAGPGIPA
Ga0318542_105524621	3300031668	Soil	AIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGS
Ga0318561_100621182	3300031679	Soil	ALHRLDVIITAYQAFLDTVRGRDDASFALVVGLLAAEAHRRADAVAALAGQRAAV
Ga0318561_104419502	3300031679	Soil	INRAPGEAEFTIPDCSDPRAIVTYALQRLNIIISAYQEFLDRVRARDDVSFALVVNLMDAETHRRADAQAALAAGPGAAVR
Ga0318561_106306632	3300031679	Soil	SDPRAIVTYGLQRLNTIIDAYQDFLDKIRGRDDVSFALVVGLLAAETHRRADIIAALAGQ
Ga0318574_104912842	3300031680	Soil	YALHRLDVIIAAYQAFLDQIRGRDDVSFVLVVGLLAAETHRRADVAAALAGPGIPA
Ga0318574_107780881	3300031680	Soil	IVSYALQRLNVIIAAYQEFLDQVRGRDDVSFALVVGLLAAEAHRRADIEAALAGQRATA
Ga0318560_101388861	3300031682	Soil	LTAPCDVEFTIPDCSSPQAIARYALHRLDIIIDAYQTLLDKVRGRDDVSFALVVDLLAAETHRRADVIAAL
Ga0318493_106024211	3300031723	Soil	SSPRAIASYARHRLDIIIDAYQTLLDKVRGRDDVSFALVVDLLAAETHRRADVIAALARS
Ga0318501_106911022	3300031736	Soil	IPDCSDPRAIVTYALQRLNIIISAYQEFLDRVRARDDVSFALVVNLLDAETHRRADAQAALAAGPGAAAR
Ga0318502_106774962	3300031747	Soil	EFTIPDCSDPRAIISYALQRLDVIIAAYQDFLDQVRGRDDVSFALVVGLLAAEAHRRADIEAALAG
Ga0318492_103604902	3300031748	Soil	ISYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLLAAKAHRRAHIEAALAGQPGAA
Ga0318492_106860312	3300031748	Soil	RAPGEAEFTIPDCSDPRAIVTYALQRLNIIISAYQEFLDRVRARDDVSFALVVNLMDAETHRRADAQAALAAGPGAAVR
Ga0318494_101888971	3300031751	Soil	VAGYARHRLDIIIGACQTLLDKVRGRDDVSFALVAGLLAAETRRRAGVIAALAGS
Ga0318494_103388683	3300031751	Soil	AIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0318537_100523802	3300031763	Soil	VIITAYQAFLDTVRGRDDASFALVVGLLAAEAHRRADAVAALAGQRAAV
Ga0318535_100610153	3300031764	Soil	LVDRAPGDTEFTIPDCSDPQAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALARS
Ga0318554_101627241	3300031765	Soil	DRAPGDTEFTIPDCSDPRAIISYALQRLNVIIAAYQDFLDQVWGRDDVSFALVVALLTAEAHRRADIEAALAREAPI
Ga0318509_106149331	3300031768	Soil	IDRAPGDNEFTIPDCSDPRAITTYALQRLNVIIAAYQAFLDKVRGRDDVSFALVVDLLGAETHRRADVMAALAGQ
Ga0318509_107511471	3300031768	Soil	IISYALQRLNVIIAAYQDFLDQVWGRDDVSFALVVALLTAEAHRRADIEAALAREAPI
Ga0318526_104847681	3300031769	Soil	YALHRLDIIIDAYQTLLDKVRGRDDVSFALVVELLAAETHRRADVIAALAGSGARP
Ga0318521_103333283	3300031770	Soil	AGYARRRLDIIIGAYQGFLEEVRGRDDVSFALVAGLLAAETRRRAGVIAALAGS
Ga0318521_104213792	3300031770	Soil	PGEGEFTIPDCSDPRAIVTYAVQRLNIIISAYQAFLDRVRARDDVSFALVVKLLDAETHRRADAQAALAGGPGAAAR
Ga0318521_104733181	3300031770	Soil	CADPRAITSYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADVAAALAGPGIPA
Ga0318521_107513621	3300031770	Soil	RAIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVA
Ga0318546_104395191	3300031771	Soil	QAIIRYALHRLDLIITAYQAFLDTVRGRDDVSFALVVGLLADEAHRRADAMAALAGQRAA
Ga0318552_103018761	3300031782	Soil	ISYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVALLTAEAHRRADIEAALAREAPI
Ga0318552_103832492	3300031782	Soil	DPRAIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRAAA
Ga0318529_101269843	3300031792	Soil	VIPGSSSTAPPGGTEFTIPDCSDPRAITSYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLLAAEAHRRADIEAALAG
Ga0318576_104340771	3300031796	Soil	IPDCSDPRAIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0318565_102580241	3300031799	Soil	IIRYALHRLDLVITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAMAALAGQRAAV
Ga0318497_103229672	3300031805	Soil	CSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAMAALAGQRAAV
Ga0318568_107818941	3300031819	Soil	IPDCSDPQAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALARS
Ga0318567_100733201	3300031821	Soil	APRAIVSYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADVMAALAGQRAAV
Ga0318567_105236081	3300031821	Soil	CSSPRAIASYALHRLDIIIDAYQTLLDKVRGRDDVSFALVVDLLAAETHRRADVIAALAR
Ga0318564_103499172	3300031831	Soil	SYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALARS
Ga0318499_103319522	3300031832	Soil	APGNYEFTIPDCTDPRAITTYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADVAAALAGPGIPA
Ga0310917_103148083	3300031833	Soil	RDIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVA
Ga0310917_110313852	3300031833	Soil	AIISDALHRLDVIIAAYEAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQ
Ga0318511_102457392	3300031845	Soil	MATYAPQRLNTSIAAYQAFPDKIRGRDDVSFALVVGLLGAETHRGADVMAALAGHGARA
Ga0318511_105310291	3300031845	Soil	SSPRAIASYALHRLDIIIDAYQTLLDKVRGRDDVSFALVVELLAAETHRRADVIAALAGSGARP
Ga0318512_104573011	3300031846	Soil	LIDRAPGDIEFTVPDCSDPRAIISYALHRLDVIITAYQAFLDRVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQ
Ga0318495_103510711	3300031860	Soil	HRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRAAV
Ga0306919_107638111	3300031879	Soil	GTEFTIPDCSDPRAIISYALQRLNVIIAAYQEFLDQVRGRDDVSFALVVGLPAAETHRRADIEAALAWQPTEA
Ga0306919_115281471	3300031879	Soil	DCSSPRAIASYALHRLDIIIDAYQTLLDKVRGRDDVSFALVVELLAAETHRRADVIAALAGSGARP
Ga0306925_108610933	3300031890	Soil	EFTIPDCSDPQAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALARS
Ga0318551_105668891	3300031896	Soil	RLNTSIAAYQAFPDKIRGRDDVSFALVVGLLGAETHRGADVMAALAGHGARA
Ga0318551_105744761	3300031896	Soil	IEFTVPDCSDPRAIISYALHRLDVIITAYQAFLNRVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQ
Ga0318551_108894573	3300031896	Soil	DPQAIIRYALHRLDLIITAYQAFLDTVRGRDDVSFALVVGLLADEAHRRADAMAALAGQRAAV
Ga0318520_100275701	3300031897	Soil	AIISYALRRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0318520_109660821	3300031897	Soil	AEFTVPDCSDPRAIVTYALQRLNIIISAYQEFLDRVRARDDVSFALVVNLMDAETHRRADAQAALAAGPGAAVR
Ga0306923_101494893	3300031910	Soil	CSDPRAIIRYALHRLDVIITAYQAFLDTVRGRDDASFALVVGLLAAEAHRRADAVAALAGQRAAV
Ga0306923_117235461	3300031910	Soil	VTYAVQRLNTIIDAYQAFLDKVRGKDDVSFALVVGLLAAETHRRADAEAALAQP
Ga0306923_124805341	3300031910	Soil	CSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAQRQAAAVAALAGQRAA
Ga0306921_114655481	3300031912	Soil	GTEFTIPDCSDPRAIISYALQRLNVIIAAYQEFLDQVRGRDDVSFALVVGLLAAEAHRRADIEAALAGQRATA
Ga0306921_117309961	3300031912	Soil	SDPRAIISYALQRLDVIIAAYQDFLDQVRGRDDVSFALVVALLTAETHRRADIEAALAREAPI
Ga0306921_120072662	3300031912	Soil	PDCSDPRAIITYGLQRLNTIIDAYQDFLDKIRGRDDVSFALVVGLLAAETHRRADIIAALAGQ
Ga0310912_102339411	3300031941	Soil	IIRYALHRLDVIITAYQAFLDRVRGRDDASFALVVGLLAAEAHRRADAVAALAGQRAAV
Ga0310916_109711781	3300031942	Soil	ARAPGDTEFTIPDCSDPRAIVTYAVQRLNTIIHAYQAFLDKVRGKDDVSFALVVGLLAAETHRRADAEAALAQP
Ga0310916_109716232	3300031942	Soil	LDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADAAAALAGPDIPA
Ga0310913_103298472	3300031945	Soil	LTAPCDVEFTIPDCSSPRAIASYALHRLDIIIDAYQTLLDKVRGRDDVSFALVVELLAAETHRRADVIAALAGSGARP
Ga0310913_106859461	3300031945	Soil	LQRLNTIIDAYQDFLDKIRGRDDVSFALVVGLLAAETHRRADVAAALAGPDIPA
Ga0310909_108120421	3300031947	Soil	IDRAPGEAEFTIPDCSDPRAIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0306926_107714142	3300031954	Soil	GDIEFTVPDCSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAMAALAGQRAAV
Ga0306922_117741122	3300032001	Soil	APGGIEFTIPDCSDPRAITSYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLPAAETHRRADIEAALAWQPTEA
Ga0306922_121476912	3300032001	Soil	QRLDVIIAAYQAFLDKTRGRDDVSFALIVGLLASETHRRADVAAALAGQETPA
Ga0318563_105319541	3300032009	Soil	YALQRLNVIIAAYQAFLDKVRGRDDVSFALVVDLLGAETHRRADVMAALAGQ
Ga0310911_100837681	3300032035	Soil	HRLDIIIGACQTLLDKVRGRDDVSFALVAGLLAAETRRRAGVIAALAGS
Ga0318559_102744892	3300032039	Soil	YALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLLAAKAHRRAHIEAALAGQPGAA
Ga0318549_100494154	3300032041	Soil	IDRAPGDIEFTVPDCSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALARS
Ga0318549_101667361	3300032041	Soil	DRAPGEAEFTIPDCSDPRAIISYALHRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0318549_104363191	3300032041	Soil	SDPRAITTYALQRLNVIIAAYQAFLDKVRGRDDVSFALVVDLLGAETHRRADVMAALAGQ
Ga0318545_103501701	3300032042	Soil	LDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0318556_104899171	3300032043	Soil	IPDCSDPRAIISYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVALLTAEAHRRADIEAALAREAPI
Ga0318570_100127663	3300032054	Soil	VAGYARHRLDIIIGACQTLLDKVRGRDDVSFALVAGLLAAETRRRAG
Ga0318533_103998762	3300032059	Soil	EFTIPDCSDPRAIISYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLLAAKAHRRAHIEAALAGQPGAA
Ga0318505_105709863	3300032060	Soil	IIRYALHRLDLIITAYQAFLDTVRGRDDVSFALVVGLLADEAHRRADAMAALAGQRAAV
Ga0318513_103117781	3300032065	Soil	LLDRAPGNYEFTIPDCTDPRAITTYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADVAAALAGPGIPA
Ga0318514_107619801	3300032066	Soil	APGGTEFTIPDCSDPRAIISYALHRLDVIITAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADVMAALAGQRAAV
Ga0318524_105477851	3300032067	Soil	VPDCSDPRAIISYALHRLDVIITAYQAFLDRVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQ
Ga0318553_105663071	3300032068	Soil	ITSYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADAAAALARPDIP
Ga0318553_107435921	3300032068	Soil	IPDCADPRAVTSYALQRLDVIIAAYQAFLDQIRGRDDVSFALVVGLLAAETHRRADVAAALARPDIPA
Ga0318553_107698621	3300032068	Soil	RLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRAAA
Ga0306924_101821234	3300032076	Soil	YRAPGVTEFTIPDCSDPRAIISYALQRLDVIIAAYQDFLDQVRGRDDVSFALVVALLTAETHRRADIEAALAREAPI
Ga0318525_102113611	3300032089	Soil	LVDRAPGSNEFAIPDCSDPRAIVSYALHRLDVIIAAYQAFLDTVRGRDDVSFALVVGLLAAETHRRADVMAALAGQRAAV
Ga0318518_100873064	3300032090	Soil	CSDPQAIISYALRRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0318577_100447145	3300032091	Soil	RAIISYALHRLDVITAAYQAFLDAVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVA
Ga0318540_100873584	3300032094	Soil	SYALRRLDVITAAYQAFLDTVRGRDDVSFALVVGLLAAEAHRRADAVAALAGQRVAA
Ga0306920_1033201183	3300032261	Soil	LLVDRAPGDTEFTIPDCSDPRAIISYARCRLDVIIAAYQAFLDTVRGRDEVSFALVVGLLAAEAHRRADAVAALAGS
Ga0306920_1034109922	3300032261	Soil	LTAPCDVEFTIPDCSSPQAIARYALHRLDIIIDAYQTLLDKVRGRDDVSFALVVDLLAAETHRRADVIAALAGSGARP
Ga0310914_100119051	3300033289	Soil	DPRAIISYALQRLNVIIAAYQDFLDQVRGRDDVSFALVVGLLAAKAHRRAHIEAALAGQPGAA
Ga0310914_110322701	3300033289	Soil	TEFTIPDCSDPRAIISYALQRLDVIIAAYQDFLDQVRGRDDVSFALVVGLLTAEAHRRADIEAALAREAPI
Ga0318519_105547442	3300033290	Soil	VPDCSDPQAIIRYALHRLDLIITAYQAFLDTVRGRDDVSFALVVGLLADEAHRRADAMAALAGQRAAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033347

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences