NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F033239

Metagenome / Metatranscriptome Family F033239

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F033239
Family Type Metagenome / Metatranscriptome
Number of Sequences 178
Average Sequence Length 50 residues
Representative Sequence MVRVLMPATQSRPYRVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALL
Number of Associated Samples 134
Number of Associated Scaffolds 178

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.98 %
% of genes near scaffold ends (potentially truncated) 51.69 %
% of genes from short scaffolds (< 2000 bps) 82.02 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (78.090 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(14.607 % of family members)
Environment Ontology (ENVO) Unclassified
(26.966 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.135 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82
1JGI12269J14319_100111538
2JGI26339J46600_100132973
3JGI26341J46601_100387873
4Ga0062595_1018689542
5Ga0068981_11414893
6Ga0068923_11449163
7Ga0070710_102266101
8Ga0070711_1009391282
9Ga0070706_1000983813
10Ga0066661_106565942
11Ga0066903_1082399523
12Ga0068863_1001586273
13Ga0070717_105217662
14Ga0070715_103727933
15Ga0070712_1005725234
16Ga0070712_1008957731
17Ga0075021_105257331
18Ga0079221_112362333
19Ga0079220_114093451
20Ga0079219_101853462
21Ga0066710_1035528201
22Ga0099827_108936493
23Ga0116214_12631602
24Ga0116220_100840681
25Ga0116220_101540472
26Ga0105237_118980712
27Ga0116133_10921212
28Ga0116224_103230632
29Ga0116216_100736511
30Ga0116216_100815502
31Ga0116216_101042733
32Ga0116216_107680041
33Ga0116134_11028772
34Ga0126374_108390402
35Ga0116219_100615463
36Ga0126380_103929842
37Ga0126373_111326452
38Ga0134109_103759622
39Ga0134084_102769422
40Ga0126372_100072451
41Ga0126378_115362082
42Ga0134128_122612523
43Ga0134128_123564631
44Ga0126381_1005099301
45Ga0136449_1002630382
46Ga0136449_1011914302
47Ga0134126_118905831
48Ga0138514_1000664131
49Ga0138554_1005971
50Ga0138584_11380451
51Ga0151490_11726441
52Ga0137383_100536253
53Ga0137382_102557501
54Ga0137382_107216602
55Ga0137374_110254381
56Ga0137380_100042489
57Ga0137381_101447934
58Ga0137376_111040122
59Ga0137378_115420211
60Ga0137377_102488754
61Ga0137377_105473551
62Ga0137387_106300921
63Ga0137386_101421011
64Ga0137366_104243392
65Ga0137385_110708472
66Ga0137390_104637253
67Ga0157342_10254213
68Ga0126369_118803131
69Ga0164307_104555393
70Ga0164305_121446261
71Ga0182005_11861871
72Ga0132258_114759574
73Ga0182036_112266611
74Ga0182040_109127121
75Ga0187812_10250853
76Ga0187802_101678871
77Ga0187818_101769541
78Ga0187818_104987612
79Ga0187814_100136632
80Ga0187809_101594453
81Ga0187809_102698623
82Ga0187879_100594613
83Ga0187781_100030568
84Ga0187781_114679181
85Ga0187780_101727891
86Ga0187780_108864731
87Ga0187782_100068297
88Ga0187883_106332331
89Ga0187766_100055165
90Ga0187766_107828122
91Ga0187766_107960961
92Ga0187766_112834741
93Ga0187765_108466902
94Ga0187770_107047351
95Ga0066669_104925313
96Ga0187800_13290531
97Ga0187800_16404421
98Ga0187800_18600982
99Ga0187797_11472701
100Ga0126371_105741673
101Ga0126371_112664072
102Ga0213851_13866081
103Ga0213853_102072091
104Ga0242672_11145231
105Ga0207692_104399472
106Ga0207684_110158512
107Ga0207702_108631093
108Ga0207702_121046001
109Ga0207641_101255684
110Ga0209073_104799681
111Ga0209656_100345333
112Ga0209069_104338981
113Ga0209069_105467071
114Ga0310037_100494295
115Ga0310037_100650243
116Ga0310039_103131521
117Ga0310038_102061772
118Ga0318516_102117893
119Ga0318516_104323892
120Ga0318515_101912011
121Ga0318574_100752491
122Ga0318574_105473513
123Ga0310686_1029033901
124Ga0318496_103734153
125Ga0318493_103244522
126Ga0318493_107510743
127Ga0306918_108750441
128Ga0318526_100017843
129Ga0318557_103661501
130Ga0318550_104933371
131Ga0318550_105713861
132Ga0318565_103161961
133Ga0318567_106227182
134Ga0318517_103200691
135Ga0318495_103921503
136Ga0308174_110584321
137Ga0308176_122397441
138Ga0306922_124034251
139Ga0318563_103446991
140Ga0318563_106171361
141Ga0318569_101793653
142Ga0318506_105720942
143Ga0318513_103813101
144Ga0318553_107630831
145Ga0306924_110724651
146Ga0318577_103096483
147Ga0311301_101892152
148Ga0311301_111102852
149Ga0307472_1020308181
150Ga0306920_1013181881
151Ga0306920_1025336052
152Ga0335085_100356384
153Ga0335085_100968825
154Ga0335085_101107645
155Ga0335079_107451753
156Ga0335079_107740961
157Ga0335079_114244722
158Ga0335079_116052201
159Ga0335080_102132892
160Ga0335080_105154191
161Ga0335080_106977573
162Ga0335080_121166672
163Ga0335081_103656753
164Ga0335081_109470312
165Ga0335081_111637191
166Ga0335081_113188682
167Ga0335069_100292995
168Ga0335074_1000494113
169Ga0335074_100135216
170Ga0335075_102135901
171Ga0335071_101136275
172Ga0335076_106150222
173Ga0335073_101238064
174Ga0335073_104842381
175Ga0335077_104778411
176Ga0335077_105038931
177Ga0335077_113497612
178Ga0318519_106790121
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.48%    β-sheet: 16.67%    Coil/Unstructured: 67.86%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055MVRVLMPATQSRPYRVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALLSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
78.1%21.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Watersheds
Peatland
Bog Forest Soil
Peatland
Freshwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Peatlands Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Peatland
Tropical Peatland
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Corn Rhizosphere
Rhizosphere
3.9%9.0%5.1%12.4%14.0%3.9%14.6%6.2%5.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1001115383300001356Peatlands SoilMVRVLMPATSDRPTESDLLLCGHHFRISQWKLDAAGAVVDVIPDTAGELVLL*
JGI26339J46600_1001329733300003218Bog Forest SoilMPAAPGRPYRMDLLLCGHHFRLSQWTLAAAGAVARVLPGTLAGEKSGLALL*
JGI26341J46601_1003878733300003219Bog Forest SoilMVQVLMPAAPGRPYRMDLLLCGHHFRLSQWTLAAAGAVARVLPGTLAGEKSGLALL*
Ga0062595_10186895423300004479SoilMVRVLMPATESRPYRVDLLLCGHHFRLSQWSLAAAGAVARVMPGRR
Ga0068981_114148933300004503Peatlands SoilDLLLCGHHFRLSQWTLAAAGAVAWLLPGGLAGDKSGLALL*
Ga0068923_114491633300004504Peatlands SoilAMVQVLMPAAPGRPYRVDLLLCGHHFRLSQWTLAASGAVARILPGRLAGEQSGLALL*
Ga0070710_1022661013300005437Corn, Switchgrass And Miscanthus RhizosphereMVRVLMPATSVRPYRVDLLCGRHFRLSQWTLAATGAVAQILPGKRTAANAPALL*
Ga0070711_10093912823300005439Corn, Switchgrass And Miscanthus RhizosphereMVRVLMPATSVRPYRVDLLCGRHFRLSQWTLAATGAVAQILPGK
Ga0070706_10009838133300005467Corn, Switchgrass And Miscanthus RhizosphereMVRVLIPAAPGRPYRVDLLLCGHHFRRSQWALAAAGAVARVLRAAEASGLALL*
Ga0066661_1065659423300005554SoilMPATESRPYRMDLLLCGHHFRLSQWTLAAAGAMARVMPGLRRADESVPALL*
Ga0066903_10823995233300005764Tropical Forest SoilLLCGHHYRLSQWTLAAAGGVAQILPGRRSEDVFEMTLF*
Ga0068863_10015862733300005841Switchgrass RhizosphereMVRVLMPATSARPYRVDLLLCGHHFRLSQWTLAAAGAVVRVLPGRRTTDNTLALL*
Ga0070717_1052176623300006028Corn, Switchgrass And Miscanthus RhizosphereMVRVLMPAAPGRPYRVDLLLCGHHFRRSQWALAAAGAVARVLRAAEASGLALL*
Ga0070715_1037279333300006163Corn, Switchgrass And Miscanthus RhizosphereLCGHHFRLSQWTLAAAGAVAKVMPGRHRAGESVPALL*
Ga0070712_10057252343300006175Corn, Switchgrass And Miscanthus RhizosphereDLLCGRHFRLSQWTLAATGAVAQILPGKRTAANAPALL*
Ga0070712_10089577313300006175Corn, Switchgrass And Miscanthus RhizosphereRPYRVDLLLCGHHFRLSQWTLAAAGAVAKVMPGRRRADEFVPALL*
Ga0075021_1052573313300006354WatershedsCGHHFRLSQWTLAAAGAVAKVIPGRRRADESVPALL*
Ga0079221_1123623333300006804Agricultural SoilYRVDLPLCGHHFRLSQWSLAAAGAVARVLPGRRSADNALALL*
Ga0079220_1140934513300006806Agricultural SoilRVELLLCGHHFRLSQWTLAAAGGVAQVLPGRRTAGVFEIALL*
Ga0079219_1018534623300006954Agricultural SoilLLCGHHFRLSRWTLAAAGGVAQVLPGQRTADVFEITHHRAPRAG*
Ga0066710_10355282013300009012Grasslands SoilMMRVLMPATQSRPYRVDVLLCGHHFRLSQWTLAAAGAMARVMPGLRRADESVPALL
Ga0099827_1089364933300009090Vadose Zone SoilDLLLCGHHFRLSQWTLAAAGAVARVLPGRHTAEASRLALL*
Ga0116214_126316023300009520Peatlands SoilMVRVLMPAAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGE
Ga0116220_1008406813300009525Peatlands SoilRRYQVELLLCGHHFRVSQWTLAASGAAAHAIPGQPAEQASQLARL*
Ga0116220_1015404723300009525Peatlands SoilMVRVLMPTAPGRPYRVDLLLCGHHFRLSEWTLAAAGAVARILPGRLADDKSGLALL*
Ga0105237_1189807123300009545Corn RhizosphereMVRVLMPTTQSRPYRVDLLLCGHHFRLSQWTLAAAGAVARMMPGRLRADESVPALL*
Ga0116133_109212123300009623PeatlandMVRVLMPATSVRPYRVELLLCGHHFRRSQWTLAAAGAVAQILPGRRTTANALALL*
Ga0116224_1032306323300009683Peatlands SoilMVQVLMPAAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGEQSGLALL*
Ga0116216_1007365113300009698Peatlands SoilMPTAPGRPYRVDLLLCGHHFRLSEWTLAAAGAAARILPGGRAGG*
Ga0116216_1008155023300009698Peatlands SoilVVKVLMPPTADRRYQVELLLCGHHFRVSQWTLAASGAAAHAIPGQPAEQASQLARL*
Ga0116216_1010427333300009698Peatlands SoilMVRVLMPTAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGEQSGLALL*
Ga0116216_1076800413300009698Peatlands SoilMVRVIMPPTAERAHPVELLLCGHHFRLSQWTLATGGAVAHNMRGDVAGRASELALL*
Ga0116134_110287723300009764PeatlandMVQVLMPAAPGRPYRVDLLLCGHHFHLSQWTLAAAGAVARILPGRLADDKSGLALL*
Ga0126374_1083904023300009792Tropical Forest SoilMVRVLIPATENRPYRVDLLLCGHHYRLSQWTLAAAEAVVKVLPGRRATDVSSEVALR*
Ga0116219_1006154633300009824Peatlands SoilVVKVLIPPTADRRYQVELLLCGHHFRVSQWTLAASGAAAHAIPGQPAEQASQLARL*
Ga0126380_1039298423300010043Tropical Forest SoilMPATPGRPYRVDLLLCGHHYRLAQWTLAAAGGVAQVLPGQRAADVFEMALL*
Ga0126373_1113264523300010048Tropical Forest SoilVDLLLCGHHFRHFQWTLAAAGGVAQVLPGRHTADVFEMTLL*
Ga0134109_1037596223300010320Grasslands SoilMVRVLMPATENRPYRVDLLLCGHHFRLSQWTLAAAGAMARVMPGLRRADESVPALL*
Ga0134084_1027694223300010322Grasslands SoilMVRVLMPATQSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRRHADESVPALL*
Ga0126372_1000724513300010360Tropical Forest SoilMMRVLMPATSDRPYRVDLLLCGHHFRLSQWTLAAAGAVAQILPGRRRAD
Ga0126378_1153620823300010361Tropical Forest SoilMMRVLMPATSDRPYRVDLLLCGHHFRLSQWTLAAAGAVAQILPGRRRADDSVPALI*
Ga0134128_1226125233300010373Terrestrial SoilLLCGHHFRLSQWTLAAAGAVVRVLPGRRTTDNTLALL*
Ga0134128_1235646313300010373Terrestrial SoilMVRVLMPATSARPYRVDLLLCGHHFRLSQWTLAAAGAVARVLPGRRTTDNTL
Ga0126381_10050993013300010376Tropical Forest SoilMPATPSRPYRVELLLCGHHFRLSQWTLAAAGGVAQVLPGQRAAEVFETALL*
Ga0136449_10026303823300010379Peatlands SoilMPPAAGRPHPVELLLCGHHFRISQWTLATAGAVAQVLRGYPAKRVAELALL*
Ga0136449_10119143023300010379Peatlands SoilMVRVLMPAAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGEQSGLALL*
Ga0134126_1189058313300010396Terrestrial SoilMVRVLMPATSARPYRVDLLLCGHHFRLSQWTLAAAGAVTQVPAGPTQRG*
Ga0138514_10006641313300011003SoilYRVDLLLCGHHFRISQWTLAAAGAVPRVLPGRRAADAFAMALF*
Ga0138554_10059713300011049Peatlands SoilTAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGEQSGLALL*
Ga0138584_113804513300011073Peatlands SoilAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGEQSGLALL*
Ga0151490_117264413300011107SoilMVRVLMPANQSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRRHADESVPALL*
Ga0137383_1005362533300012199Vadose Zone SoilMVRVLMPATQSWPYRVDLLLCGHHFRLSQWTLAAAGAVAQVVPGRRRADESVPALL*
Ga0137382_1025575013300012200Vadose Zone SoilVLVLTPATESRPYRMDLLLCGHHFRLSQWTLAAAGAMARVMPGLRRADESVPALL*
Ga0137382_1072166023300012200Vadose Zone SoilMVRVLMPATENRPYRVDLLLCGHHFRLSQWTLAAAGAMARVMPGLRR
Ga0137374_1102543813300012204Vadose Zone SoilRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRRHADESVPALL*
Ga0137380_1000424893300012206Vadose Zone SoilMVRVLMPAAQDRPYRVDLLLCGHHFRLSQWTLAAAGAVARVLPGRPPTETAKLALL*
Ga0137381_1014479343300012207Vadose Zone SoilMVRVLMPATQSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVTPGRRHADESVPALL*
Ga0137376_1110401223300012208Vadose Zone SoilMVRVLMPATKSRPYRVDLLLCGHHFRLSQWTLAAAGA
Ga0137378_1154202113300012210Vadose Zone SoilMPTAPDRPHRVDLLLCGHHFRLSQWTLAAAGAVARVLPGHAAAEESRLALL*
Ga0137377_1024887543300012211Vadose Zone SoilMVRVLMPATQSWPYRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRRRADESVPALL*
Ga0137377_1054735513300012211Vadose Zone SoilMVRVLMPAAQDRPYRVDLLLCGHHFRLSQWTLAAAGAVARVLPGQQPTETAK
Ga0137387_1063009213300012349Vadose Zone SoilMVRVLMPATQSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRRRADESVPALL*
Ga0137386_1014210113300012351Vadose Zone SoilMVRVLMPTTQSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRRRADESVPALL*
Ga0137366_1042433923300012354Vadose Zone SoilMVRVLMPATPSRPYRVDLLLCGHHFRISQWALAAAGAMPRLLPGRRTADASAMALF*
Ga0137385_1107084723300012359Vadose Zone SoilMPAATSQPYRVDLLLCGHHFRLSQWTLAAAGAVAQVL
Ga0137390_1046372533300012363Vadose Zone SoilMPAAPGRPYRVDLLLCGHHFRRSQWALAAAGAVARVLRAAEASGLALL*
Ga0157342_102542133300012507Arabidopsis RhizosphereMPATSARPYRMDLLLCGHHFRLSQWTLAAAGAVAKVMPGRRHADESVPALL*
Ga0126369_1188031313300012971Tropical Forest SoilRPYRVELLLCGHHFRLSQWTLAAARGVARVLPGQRATEVFETALL*
Ga0164307_1045553933300012987SoilMVRVLMPATSARLYRVDLLLCGHHFRLSQWTLAAAGAVARVLPG*
Ga0164305_1214462613300012989SoilLCGHHFRLSQWTLAAAGAVAQVMPGRRRADESVPALL*
Ga0182005_118618713300015265RhizosphereMPATSARPYRVDLLLCGHHFRLSQWTLAAAGAVARVLPGRRTTDNTLALL*
Ga0132258_1147595743300015371Arabidopsis RhizosphereMPATPSRPYRVELLLCGHHFRLSRWTLAAAGGVAQVLPGQRTADVFEITHHRAPRAG*
Ga0182036_1122666113300016270SoilYRVDLLLCGHHYHLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0182040_1091271213300016387SoilMPATASRPYRVDVLLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0187812_102508533300017821Freshwater SedimentMPAAPGRPYRVDLLLCGHHFRLSQWTLAAAGAVARILPGRLAGEQSGLALL
Ga0187802_1016788713300017822Freshwater SedimentMPSTSDRPYRVELLLCGHHFRLSQWTLAAAGAVARVIPGSSAGRVAELALL
Ga0187818_1017695413300017823Freshwater SedimentMPAAPGRPYRVDLLLCGHHFRLSQWTLAAAGAVARILPGRPAGEQSGLALL
Ga0187818_1049876123300017823Freshwater SedimentMPSTSDRPYRVELLLCGHHFRLSQWTLAAAGAVARVIPGSSAARVSELALL
Ga0187814_1001366323300017932Freshwater SedimentMPAAPGRPYRVDLLLCGHHFRLSQWTLAAAGAVAWILPGRLAGEQSGLALL
Ga0187809_1015944533300017937Freshwater SedimentLMLATPSRPYRVDLLLCGHHYRLSQWTLAAAEAMVQVLPGRRAADVFEMALL
Ga0187809_1026986233300017937Freshwater SedimentMPAAPGRPYRVDLLLCGHHFRLSQWSLAAAGAVARVMPGRRRADESVPALL
Ga0187879_1005946133300017946PeatlandMPAAPGRPYRVDLLLCGHHFHLSQWTLAAAGAVARILPGRLADDKSGLALL
Ga0187781_1000305683300017972Tropical PeatlandMPPTTDRRYRVELLLCGHHFRLSQWTLATVGAVARVIPGSSAGRVSELALL
Ga0187781_1146791813300017972Tropical PeatlandMVRVLMPATASRPYRVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRTANA
Ga0187780_1017278913300017973Tropical PeatlandRPYRVELLLCGHHFRLSQWTLASAGAVARVIPGSSAARVSELALL
Ga0187780_1088647313300017973Tropical PeatlandYRVDLLLCGHHFRLSQWTLAAAGAVARVLPDRAADRTARLALL
Ga0187782_1000682973300017975Tropical PeatlandMPPTADRRYRVELLLCGHHFRLSQWTLATVGAVARVIPGSSAGRVSELALL
Ga0187883_1063323313300018037PeatlandDLLLCGHHFHLSQWTLAAAGAVARILPGRLADDKSGLALL
Ga0187766_1000551653300018058Tropical PeatlandMVRVFMPSAPHRPYRVELLLCGHHFRLCKWTLAAAGAVARVIPDKVGELALL
Ga0187766_1078281223300018058Tropical PeatlandVLMPSTSDRPYRVELLLCGHHFRLSQWTLASAGAVARVIPGSSAARVSELALL
Ga0187766_1079609613300018058Tropical PeatlandPSTSDRPYRVELLLCGHHFRLSQWTLAAVGAVARVIPGSSAGRISELALL
Ga0187766_1128347413300018058Tropical PeatlandMVRVLMPATSARPYRVDLLLCGHHFRLSQWTLAAAGAVARVLPGRTADRTAELALL
Ga0187765_1084669023300018060Tropical PeatlandMVRVLMPATASRPYRVDLLLCGHHFRLSQWTLATTGAMARILPGRTPGPA
Ga0187770_1070473513300018090Tropical PeatlandTASRRYRVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRDADASALALL
Ga0066669_1049253133300018482Grasslands SoilLPMVRVLMPAPGNRPYRVDLLLCGHHFRLSQWTLAAAGAMARVMPGLRRADESVPALL
Ga0187800_132905313300019278PeatlandSRPVVGVLMPATADRPYRVELLLCGHHFRLSQWTLAAAGAVARVVPGSSAGRVSELALL
Ga0187800_164044213300019278PeatlandPMVRVLMPATASRPYRVELLLCGHHFRLSQWTLAATGAMARVLPGRAADRTAQLALL
Ga0187800_186009823300019278PeatlandVLMPPTTDRRYRVELLLCGHHFRLSQWTLATVGAVARVIPGSSAGRVSELALL
Ga0187797_114727013300019284PeatlandSRPVVGVLMPATADRPYRVELLLCGHHFRLSQWTLAAVGAVARVVPGSSAGRVSELALL
Ga0126371_1057416733300021560Tropical Forest SoilMVRVLLPATPSRPYGVDLLLCGLHYHISQLTLAAAEAVVQVLPGGREAGGPSLH
Ga0126371_1126640723300021560Tropical Forest SoilMDGKACCCSARPVVRVLMPATPIRPYRVDLLLCAPHFRLSQWTLAAAEAVVQVLPDRSTADVMDLP
Ga0213851_138660813300021860WatershedsPSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVITGRRRADESVPALL
Ga0213853_1020720913300021861WatershedsHSRPYRVDLLLCGHYFRLSQWGLAAAGAVAQVMPGRRRADESVPALL
Ga0242672_111452313300022720SoilACCCPSRPVVRVLMPATPNRPDRVASPPCGQHFRLAQWTLAAAEAVVQVLPGRSIADASEMALL
Ga0207692_1043994723300025898Corn, Switchgrass And Miscanthus RhizosphereMVRVLMPATSVRPYRVDLLCGRHFRLSQWTLAATGAVAQILPGKRTA
Ga0207684_1101585123300025910Corn, Switchgrass And Miscanthus RhizosphereMVRVLIPAAPGRPYRVDLLLCGHHFRRSQWALAAAGAVARVLRAAEASGLALL
Ga0207702_1086310933300026078Corn RhizosphereRVLMPATSARPYRVDLLLCGHHFRLSQWTLAAAGAVARVLPGRRTTDNTLALL
Ga0207702_1210460013300026078Corn RhizosphereLMPTTESRPYRVDLLLCGHHFRLTQWTLAAAGAVARVMPGRRRADESVPALL
Ga0207641_1012556843300026088Switchgrass RhizosphereMVRVLMPATSARPYRVDLLLCGHHFRLSQWTLAAAGAVVRVLPGRRTTDNTLALL
Ga0209073_1047996813300027765Agricultural SoilRVELLLCGHHFRLSQWTLAAAGGVAQVLPGRRTAGVFEIALL
Ga0209656_1003453333300027812Bog Forest SoilMPAAPGRPYRMDLLLCGHHFRLSQWTLAAAGAVARVLPGTLAGEKSGLALL
Ga0209069_1043389813300027915WatershedsVRVLMPATQSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRHRADESVPALL
Ga0209069_1054670713300027915WatershedsMVRVLMPATQSRPYRVDLLLCGHHFRVSQWTLAAAGAVAKVMPARRHADEFVPALF
Ga0310037_1004942953300030494Peatlands SoilMPTAPGRPYRVDLLLCGHHFRLSEWTLAAAGAAARILPGGRAGG
Ga0310037_1006502433300030494Peatlands SoilMVRVLMPAAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGEQSGLALL
Ga0310039_1031315213300030706Peatlands SoilVVKVLIPPTADRRYQVELLLCGHHFRVSQWTLAASGAAAHAIPGQPAEQASQLARL
Ga0310038_1020617723300030707Peatlands SoilMVRVLMPTAPGRPYRVDLLLCGHHFRLSQWTLAATGAVARILPGRLAGEQSGLALL
Ga0318516_1021178933300031543SoilMPATPSRPYRVELLLCGHHFRLSQWTLAAAGGVARVLPGQRAAEVFETALL
Ga0318516_1043238923300031543SoilMPATASRPYRVDLLLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318515_1019120113300031572SoilRVDLLLCGHHYHLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318574_1007524913300031680SoilPAIPSRPYRVDLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0318574_1054735133300031680SoilGRPYRVDLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0310686_10290339013300031708SoilMVRVLMPTPPDRPCRVDLLLCGHHFRISQWKLAAAGAVVDVIPDTSGELV
Ga0318496_1037341533300031713SoilAIPGRPYRVDLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0318493_1032445223300031723SoilMPATASRPYRVDLLLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMAL
Ga0318493_1075107433300031723SoilVLMPATASRPYRVDLLLCGHHYHLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0306918_1087504413300031744SoilASRPYRVDLLLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318526_1000178433300031769SoilMPATPSRPYRVDLLLCGHHFRRSQWDLAAAGAVASVLPGRRATEGAGLALL
Ga0318557_1036615013300031795SoilPSRPYRVDLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0318550_1049333713300031797SoilLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318550_1057138613300031797SoilYRVELLLCGHHFRLSQWTLAAAGGVARVLPGQRAAEVFETALL
Ga0318565_1031619613300031799SoilTASRPYRVDLLLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318567_1062271823300031821SoilPVVRVLMPAIPGRPYRVDLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0318517_1032006913300031835SoilMPATPSRPYRVELLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0318495_1039215033300031860SoilLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0308174_1105843213300031939SoilDLLLCGHHFRLSQWTLAAAGAVARVMPGRRRSDESVPALL
Ga0308176_1223974413300031996SoilMPATQSRPYRMDLLLCGHHFRLCQWTLAAAGAVARVMPGRRRADESVPALL
Ga0306922_1240342513300032001SoilLMPAIPGRPYRVDLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0318563_1034469913300032009SoilMPATASRPYRVDLLLCGHHYHLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318563_1061713613300032009SoilMPATASRPYRVDLLLCDHHYRLVQWALAAAGGVAQILPGRRAANVSEMAPL
Ga0318569_1017936533300032010SoilYRVDLLLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318506_1057209423300032052SoilPYRVDLLLCGHHYRLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0318513_1038131013300032065SoilLARPVVRVLMPAIPSRPYRVDLLLCGHHFRLSQWTLAAAGGVAQVLPGRRAADVFEMAPL
Ga0318553_1076308313300032068SoilTASRPYRVDLLLCGHHYHLFQWTLAAAGGTAQILPGRRTADVSDMALF
Ga0306924_1107246513300032076SoilMPATPSRPYRVELLLCGHHFRLSQWTLAAAGGVARVLPGPRAAEVFESALL
Ga0318577_1030964833300032091SoilMPATPSRPYRVDLLLCGHHFRHFQWTLAAAGGVAQVLPGRHTADVFEMTLL
Ga0311301_1018921523300032160Peatlands SoilMPPAAGRPHPVELLLCGHHFRISQWTLATAGAVAQVLRGYPAKRVAELALL
Ga0311301_1111028523300032160Peatlands SoilMVRVIMPPTAERAHPVELLLCGHHFRLSQWTLATGGAVAHNMRGDVAGRASELALL
Ga0307472_10203081813300032205Hardwood Forest SoilMPATPSRSYRVELLLCGHHFRLSQWTLAAAGAVAKVMPGRHRAGESVPALL
Ga0306920_10131818813300032261SoilATPSRPYRVELLLCGHHFRLSQWTLAAAGGVARVLPGQRAAEVFETALL
Ga0306920_10253360523300032261SoilMVRVLMPATASRPYRVELLLCGHHYRLSQWTLAAAGGVAQLLPGRRI
Ga0335085_1003563843300032770SoilMPATQSRPYRVELLLCGHHFRLSQWTLAAAGAVARVMPGRRHAGESVPALL
Ga0335085_1009688253300032770SoilMPATASRPYRVDLLLCGHHYRLFQWTLAAAGGVAQILPGRRTADLSEMALL
Ga0335085_1011076453300032770SoilMVRVLMPITPARPYRVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRTEDARALALL
Ga0335079_1074517533300032783SoilMVRVLMPATQSRPYRVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALL
Ga0335079_1077409613300032783SoilYRVDLLLCGHHFRLAQWTLAAAGGVAQVLPGRRAADVFEMALL
Ga0335079_1142447223300032783SoilRMDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALL
Ga0335079_1160522013300032783SoilMPPTTGRPYRVELLLCGHHFRLSQWTLATVGAVARVIPGGSAGRVSELALL
Ga0335080_1021328923300032828SoilVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALL
Ga0335080_1051541913300032828SoilMVRVLMPATRARPYRVDLLLCGHHFRLAQWTLAASGAVAQVLPGRRTEDARALALL
Ga0335080_1069775733300032828SoilMPATASRPYRVDLLLCGHHYRLCQWTLAAAGGVAQILPGRRTADLSEMALL
Ga0335080_1211666723300032828SoilRPYRVELLLCGHHFRLSQWTLAAVGAVARVMPGGSAGRVSELALL
Ga0335081_1036567533300032892SoilVELLLCGHHFRLSQWTLAAAGAVARVIPGGSAERMSELALL
Ga0335081_1094703123300032892SoilMVRVLMPATASRPYRVDLLLCGHHFRLSQWTLAVAGATARVLPGRPADRTAELALL
Ga0335081_1116371913300032892SoilMVRVLMPATQSRPYRMDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALL
Ga0335081_1131886823300032892SoilMVRVLMPATASRPYRVDLLLCGHHFRLSQWTLAAAGAVARVLPGRAAGRTTELALL
Ga0335069_1002929953300032893SoilMPATASRPYRVDLLLCGHHYRLSQWTLAAAGGVAQILPGRRIADVSDLVLF
Ga0335074_10004941133300032895SoilMPPTAGRLYRVELLLCGHHFRLSQWTLAAAGAVARVVPGKPAEPAAQLTLL
Ga0335074_1001352163300032895SoilMPPTADRPCWVELLLCGHHFRLSQWTLAAAGAVAWVMLGASVERTAELALL
Ga0335075_1021359013300032896SoilPCGHHFRLSQWILAAVGTVARVLPDSSAGRVSELALL
Ga0335071_1011362753300032897SoilMPATASRPYRVELLLCGHHYRLSQWTLAAAGGVAQILPGRRTADLSEMALL
Ga0335076_1061502223300032955SoilTQSRPYRVDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALL
Ga0335073_1012380643300033134SoilMVRVIMPPAADRPHEVELLLCGHHFRRSQWTLAAAGAMISV
Ga0335073_1048423813300033134SoilSRPYRVDLLLCGHHFRLSQWTLAAAGAVARVMPGRRRADDSVPALI
Ga0335077_1047784113300033158SoilVVRVLMPRTTDRPYRVELLLCGHHFRLSQWTLAAAGAVARVIPGGSAERMSELALL
Ga0335077_1050389313300033158SoilVDLLLCGHHFRLSQWTLAASGAVARVLPGRAADRTAQLALL
Ga0335077_1134976123300033158SoilMDLLLCGHHFRLSQWTLAAAGAVAQVLPGRRHADESVLALL
Ga0318519_1067901213300033290SoilMVRVLMPATASRPYRVDLLLCGHHYHLFQWTLAAAGGTAQILPGRRTADVSDMALF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.