Metagenome / Metatranscriptome Family F033203

Basic Information
Family ID	F033203
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	41 residues
Representative Sequence	EVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Number of Associated Samples	146
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.56 %
% of genes near scaffold ends (potentially truncated)	98.88 %
% of genes from short scaffolds (< 2000 bps)	91.01 %
Associated GOLD sequencing projects	139
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (88.764 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.292 % of family members)
Environment Ontology (ENVO)	Unclassified (21.348 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.247 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.84% β-sheet: 0.00% Coil/Unstructured: 67.16%
Feature Viewer

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Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF01738	DLH	6.74
PF16156	DUF4864	3.37
PF02617	ClpS	2.81
PF00857	Isochorismatase	2.81
PF01402	RHH_1	2.25
PF02776	TPP_enzyme_N	2.25
PF03401	TctC	1.69
PF12697	Abhydrolase_6	1.69
PF07690	MFS_1	1.12
PF00089	Trypsin	1.12
PF00083	Sugar_tr	1.12
PF00296	Bac_luciferase	1.12
PF13671	AAA_33	1.12
PF00175	NAD_binding_1	1.12
PF10049	DUF2283	0.56
PF00561	Abhydrolase_1	0.56
PF04964	Flp_Fap	0.56
PF14499	DUF4437	0.56
PF00694	Aconitase_C	0.56
PF00484	Pro_CA	0.56
PF03972	MmgE_PrpD	0.56
PF07662	Nucleos_tra2_C	0.56
PF03960	ArsC	0.56
PF01977	UbiD	0.56
PF00483	NTP_transferase	0.56
PF07927	HicA_toxin	0.56
PF13669	Glyoxalase_4	0.56
PF13618	Gluconate_2-dh3	0.56
PF03928	HbpS-like	0.56
PF08734	GYD	0.56
PF00565	SNase	0.56
PF00300	His_Phos_1	0.56
PF13532	2OG-FeII_Oxy_2	0.56
PF00072	Response_reg	0.56
PF04392	ABC_sub_bind	0.56
PF13432	TPR_16	0.56
PF01979	Amidohydro_1	0.56
PF00034	Cytochrom_C	0.56
PF13592	HTH_33	0.56
PF00903	Glyoxalase	0.56
PF00909	Ammonium_transp	0.56
PF01593	Amino_oxidase	0.56
PF01161	PBP	0.56
PF01494	FAD_binding_3	0.56
PF13594	Obsolete Pfam Family	0.56
PF05199	GMC_oxred_C	0.56
PF11295	DUF3096	0.56
PF01909	NTP_transf_2	0.56
PF02224	Cytidylate_kin	0.56
PF03992	ABM	0.56
PF01850	PIN	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	2.81
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	2.81
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.81
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.69
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.12
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.12
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.56
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.56
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.56
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.56
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.56
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.56
COG1972	Nucleoside permease NupC	Nucleotide transport and metabolism [F]	0.56
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.56
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.56
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	0.56
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.56
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.56
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.56
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.56
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	0.56
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.76 %
Unclassified	root	N/A	11.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.76 %
Unclassified	root	N/A	11.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.76 %
Unclassified	root	N/A	11.24 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.57 %
Unclassified	root	N/A	11.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.25 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.97 %
Unclassified	root	N/A	11.24 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.69 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.69 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.12 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.56 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.56 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.73 %
Unclassified	root	N/A	11.24 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.25 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.69 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.69 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.12 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.12 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.12 %
Holosporales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.24 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.81 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.25 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.69 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.69 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.12 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.12 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	0.56 %
Candidatus Paracaedibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae	0.56 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.56 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.24 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.25 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.69 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.69 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	1.12 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.12 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.56 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.56 %
Candidatus Odyssella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella	0.56 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.24 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.25 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.69 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.69 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.69 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.12 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.12 %
unclassified Candidatus Odyssella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella	0.56 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.56 %
Mesorhizobium soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium soli	0.56 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.56 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.56 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.24 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.25 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.69 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.69 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.12 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1.12 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.56 %
Candidatus Odyssella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	0.56 %
Mesorhizobium soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium soli	0.56 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.56 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.56 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.56 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.56 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12719938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1205	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10039374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1085	Open in IMG/M
3300000955\|JGI1027J12803_108951238	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300000956\|JGI10216J12902_121774351	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300001661\|JGI12053J15887_10269452	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300002245\|JGIcombinedJ26739_101071774	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300002568\|C688J35102_119880554	Not Available	802	Open in IMG/M
3300004281\|Ga0066397_10018921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1000	Open in IMG/M
3300004633\|Ga0066395_10270791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300005167\|Ga0066672_10286157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium soli	1068	Open in IMG/M
3300005172\|Ga0066683_10253602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1091	Open in IMG/M
3300005332\|Ga0066388_101253289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1273	Open in IMG/M
3300005332\|Ga0066388_105924584	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005332\|Ga0066388_106120657	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005439\|Ga0070711_100992414	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005471\|Ga0070698_100486838	Not Available	1171	Open in IMG/M
3300005554\|Ga0066661_10330023	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005561\|Ga0066699_11287016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Odyssella → unclassified Candidatus Odyssella → Candidatus Odyssella sp.	501	Open in IMG/M
3300005586\|Ga0066691_10744744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005713\|Ga0066905_100497956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300005713\|Ga0066905_101970421	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005764\|Ga0066903_105457139	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300005764\|Ga0066903_105506753	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005764\|Ga0066903_106182819	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006047\|Ga0075024_100861887	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006172\|Ga0075018_10224686	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300006175\|Ga0070712_100008551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6439	Open in IMG/M
3300006844\|Ga0075428_100702021	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300006845\|Ga0075421_102542160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	533	Open in IMG/M
3300006845\|Ga0075421_102652185	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300006969\|Ga0075419_10215961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1274	Open in IMG/M
3300009089\|Ga0099828_11720114	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009100\|Ga0075418_12730880	Not Available	539	Open in IMG/M
3300009143\|Ga0099792_10573200	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300009147\|Ga0114129_13525543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	500	Open in IMG/M
3300009156\|Ga0111538_11966538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	735	Open in IMG/M
3300009257\|Ga0103869_10159264	Not Available	601	Open in IMG/M
3300009789\|Ga0126307_10177534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1707	Open in IMG/M
3300009792\|Ga0126374_11188804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300009792\|Ga0126374_11421734	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010039\|Ga0126309_11246105	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300010043\|Ga0126380_10260471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1207	Open in IMG/M
3300010047\|Ga0126382_10596461	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300010047\|Ga0126382_11390068	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010329\|Ga0134111_10104568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1089	Open in IMG/M
3300010336\|Ga0134071_10074873	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1576	Open in IMG/M
3300010359\|Ga0126376_10456965	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300010359\|Ga0126376_12101844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300010360\|Ga0126372_11181895	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	788	Open in IMG/M
3300010362\|Ga0126377_10127822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2357	Open in IMG/M
3300010362\|Ga0126377_11416131	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010362\|Ga0126377_13216170	Not Available	528	Open in IMG/M
3300010376\|Ga0126381_100024510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7123	Open in IMG/M
3300010376\|Ga0126381_102958900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300010376\|Ga0126381_103944771	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010398\|Ga0126383_10536602	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1234	Open in IMG/M
3300010398\|Ga0126383_11447594	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	777	Open in IMG/M
3300010398\|Ga0126383_12889885	Not Available	561	Open in IMG/M
3300011270\|Ga0137391_10439948	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300011270\|Ga0137391_10759635	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300012096\|Ga0137389_10168208	All Organisms → cellular organisms → Bacteria → Proteobacteria	1807	Open in IMG/M
3300012189\|Ga0137388_11174851	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300012203\|Ga0137399_10102136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2220	Open in IMG/M
3300012203\|Ga0137399_11649512	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012353\|Ga0137367_10966974	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012356\|Ga0137371_10352360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300012357\|Ga0137384_10050317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3447	Open in IMG/M
3300012357\|Ga0137384_10650169	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012357\|Ga0137384_11602225	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300012361\|Ga0137360_11695034	Not Available	537	Open in IMG/M
3300012363\|Ga0137390_10808605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	895	Open in IMG/M
3300012469\|Ga0150984_111558665	Not Available	610	Open in IMG/M
3300012685\|Ga0137397_10710485	Not Available	747	Open in IMG/M
3300012902\|Ga0157291_10403229	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012918\|Ga0137396_11025564	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012924\|Ga0137413_10787603	Not Available	729	Open in IMG/M
3300012930\|Ga0137407_12037393	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012944\|Ga0137410_10620893	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300012955\|Ga0164298_10039310	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300012957\|Ga0164303_10023073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2435	Open in IMG/M
3300012961\|Ga0164302_10881129	Not Available	685	Open in IMG/M
3300012971\|Ga0126369_10421911	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M
3300012971\|Ga0126369_11337641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300012975\|Ga0134110_10629139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012989\|Ga0164305_11784632	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300014326\|Ga0157380_11719363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	685	Open in IMG/M
3300014865\|Ga0180078_1042021	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300014968\|Ga0157379_11625174	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300015358\|Ga0134089_10277002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300015373\|Ga0132257_103471318	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300016294\|Ga0182041_10612152	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300016294\|Ga0182041_11982077	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300016357\|Ga0182032_11594260	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300016371\|Ga0182034_10898537	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300016371\|Ga0182034_11354291	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300016387\|Ga0182040_10410062	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300016404\|Ga0182037_11200423	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300016422\|Ga0182039_11825785	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300016445\|Ga0182038_10062354	All Organisms → cellular organisms → Bacteria → Proteobacteria	2548	Open in IMG/M
3300018075\|Ga0184632_10190265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	904	Open in IMG/M
3300018081\|Ga0184625_10478354	Not Available	633	Open in IMG/M
3300018429\|Ga0190272_10812356	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300018431\|Ga0066655_11071389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300018468\|Ga0066662_11675693	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300018476\|Ga0190274_12060472	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300019356\|Ga0173481_10343585	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300020579\|Ga0210407_10773175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	742	Open in IMG/M
3300020583\|Ga0210401_10258568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1601	Open in IMG/M
3300021082\|Ga0210380_10355765	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300021082\|Ga0210380_10529173	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300021086\|Ga0179596_10387421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	704	Open in IMG/M
3300021086\|Ga0179596_10393896	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300021171\|Ga0210405_11384217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300021178\|Ga0210408_10913599	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300021407\|Ga0210383_11502223	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300021432\|Ga0210384_10911551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	779	Open in IMG/M
3300021475\|Ga0210392_10491036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	904	Open in IMG/M
3300021479\|Ga0210410_10687017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	905	Open in IMG/M
3300021861\|Ga0213853_11620361	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300022726\|Ga0242654_10068130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1052	Open in IMG/M
3300023058\|Ga0193714_1022936	Not Available	922	Open in IMG/M
3300025915\|Ga0207693_10082838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2512	Open in IMG/M
3300025918\|Ga0207662_11078586	Not Available	571	Open in IMG/M
3300026075\|Ga0207708_10098524	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300026277\|Ga0209350_1028604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1674	Open in IMG/M
3300026277\|Ga0209350_1072176	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300026313\|Ga0209761_1305789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	550	Open in IMG/M
3300026537\|Ga0209157_1028429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3280	Open in IMG/M
3300027324\|Ga0209845_1011291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1502	Open in IMG/M
3300027512\|Ga0209179_1092712	Not Available	670	Open in IMG/M
3300027787\|Ga0209074_10083067	Not Available	1051	Open in IMG/M
3300027842\|Ga0209580_10205181	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	978	Open in IMG/M
3300027869\|Ga0209579_10099467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1541	Open in IMG/M
3300027880\|Ga0209481_10188860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300027882\|Ga0209590_10511667	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300027903\|Ga0209488_10959514	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300027952\|Ga0209889_1083562	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300028047\|Ga0209526_10645887	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300028536\|Ga0137415_10105772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2664	Open in IMG/M
3300028536\|Ga0137415_11385450	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300028754\|Ga0307297_10308787	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300028782\|Ga0307306_10081367	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300028812\|Ga0247825_10080963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2183	Open in IMG/M
3300028872\|Ga0307314_10041195	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300031093\|Ga0308197_10310709	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300031572\|Ga0318515_10672789	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031679\|Ga0318561_10542649	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031679\|Ga0318561_10625447	Not Available	592	Open in IMG/M
3300031679\|Ga0318561_10826199	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031682\|Ga0318560_10399872	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031719\|Ga0306917_10022850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3892	Open in IMG/M
3300031719\|Ga0306917_10848542	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031740\|Ga0307468_101460391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300031740\|Ga0307468_102496180	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	506	Open in IMG/M
3300031744\|Ga0306918_10806942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300031765\|Ga0318554_10372075	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300031768\|Ga0318509_10231827	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300031770\|Ga0318521_10623178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300031797\|Ga0318550_10586451	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031833\|Ga0310917_10590727	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031835\|Ga0318517_10491405	Not Available	553	Open in IMG/M
3300031897\|Ga0318520_10924122	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031910\|Ga0306923_11130996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300031912\|Ga0306921_10161375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2624	Open in IMG/M
3300031947\|Ga0310909_11562715	Not Available	524	Open in IMG/M
3300031959\|Ga0318530_10022961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	2162	Open in IMG/M
3300031995\|Ga0307409_101768447	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300032001\|Ga0306922_12055501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	555	Open in IMG/M
3300032041\|Ga0318549_10377074	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300032044\|Ga0318558_10352093	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300032059\|Ga0318533_10688973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300032059\|Ga0318533_11193820	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	557	Open in IMG/M
3300032068\|Ga0318553_10193973	Not Available	1058	Open in IMG/M
3300032094\|Ga0318540_10351068	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032261\|Ga0306920_103889289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300032261\|Ga0306920_104121245	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300033550\|Ga0247829_11179901	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300034257\|Ga0370495_0081170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	995	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.70%
Host-Associated	Host-Associated	7.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.64%
Plants	Host-Associated → Plants	7.30%
Aquatic	Environmental → Aquatic	5.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.74%
Freshwater	Environmental → Aquatic → Freshwater	2.25%
Sediment	Environmental → Aquatic → Sediment	2.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.72%
Loam	Environmental → Terrestrial → Soil → Loam	11.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.69%
Sand	Environmental → Terrestrial → Soil → Sand	1.12%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.12%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.12%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.69%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.12%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.12%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.12%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.12%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.12%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.12%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.56%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009257	Microbial communities of water from Amazon river, Brazil - RCM22	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033203

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_127199384	3300000789	Soil	SGTGHGYSTPKNKDEERANAQSLASSARFLKEIFNGE*
AF_2010_repII_A001DRAFT_100393742	3300000793	Forest Soil	TGHGFSTPKNKAEERANAQSIASTARTLKELFGTGLPGLP*
JGI1027J12803_1089512382	3300000955	Soil	VPFQLEVYSGTGHGFSTPKNKAEERANTQSIASTARTLKELFGI*
JGI10216J12902_1217743511	3300000956	Soil	EVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI*
JGI12053J15887_102694523	3300001661	Forest Soil	GTGHGFSTPKNKAEERANAQSIGTTARTLKELFGI*
JGIcombinedJ26739_1010717742	3300002245	Forest Soil	KVPFELEVYSGTGHGFSTPKNSAEERANSQSIGTTARTLKELFGI*
C688J35102_1198805541	3300002568	Soil	EVYSGTGHGFSSPKGKDEERANAQSIATTSRTMKELFGI*
Ga0066397_100189211	3300004281	Tropical Forest Soil	EVYSGTGHGFSTPKNKAEERANAQSIASTGRTLKELFGI*
Ga0066395_102707913	3300004633	Tropical Forest Soil	FQLEVYSGTGHGFSTPKNKAEERANVQSIASTARTLKELFGI*
Ga0066672_102861572	3300005167	Soil	AKVRFELEVYSGTGHGFSAPKNKDEERANTESIATTARTLKELFGT*
Ga0066683_102536021	3300005172	Soil	QYELYSGAGHGFSTPKDKAEERANVQSIASTERFLKEVFAR*
Ga0066388_1012532891	3300005332	Tropical Forest Soil	AKVPFQLEVYSGTGHGFSTPKNKAEERANVQSIASTARTLKELFGI*
Ga0066388_1059245841	3300005332	Tropical Forest Soil	PFQLEVYSGTGHGFSSPKNKAEERANEQSIASTGRTLKELFGI*
Ga0066388_1061206571	3300005332	Tropical Forest Soil	LKAAKTPFEVELYSGTAHGFSQPKNKAEERAITQAKATTGRTLKELFGA*
Ga0070711_1009924141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EVYSGTGHGFSTPKNKAEERANTQSIAATARTLKELFGI*
Ga0070698_1004868381	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EVYSGTGHGFSTPKNKAEERANAQSIASATRTLKELFGI*
Ga0066661_103300233	3300005554	Soil	EVYSGTGHGFSTPKNKAEERANAQSIGTTARTLKELFGI*
Ga0066699_112870162	3300005561	Soil	LEVYSGTGHGFSTPKNKDEERANTQSIATTARTFKELFGI*
Ga0066691_107447442	3300005586	Soil	GTGHGFSTPKNKAEERANEQSIGTTARTLKELFGI*
Ga0066905_1004979562	3300005713	Tropical Forest Soil	LRGAKVPFQLEVYSGTGHGFSTPKNKAEERANVQSIASTARTLKELFGI*
Ga0066905_1019704212	3300005713	Tropical Forest Soil	VPFELEVYSGTGHGFSTPKNPAEERANAQSIAATTRTLKEVFGPRGGI*
Ga0066903_1054571392	3300005764	Tropical Forest Soil	RAAKIGWQLELYSGTKHGFSTPKNADEERANAQSQAAMARFFKEVFGI*
Ga0066903_1055067533	3300005764	Tropical Forest Soil	GTGHGFSTPKNKAEERANAQSIASTARTLKELFGI*
Ga0066903_1061828193	3300005764	Tropical Forest Soil	AKVPFQLEVYSGTGHGFSTPKNKAEERANTQSIAATARTLKELFGI*
Ga0075024_1008618871	3300006047	Watersheds	YSGAEHGFSTPKNKAEERANSRSIEATDRYLKETFGI*
Ga0075018_102246863	3300006172	Watersheds	LEVYSGTGHGFSTPKGSSEERANTQSIGTTARTLKELFGS*
Ga0070712_1000085511	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI*
Ga0075428_1007020212	3300006844	Populus Rhizosphere	ANVPFQVEIYGGVGHGFYKPANKAEERALELSFASTARNLREVFGD*
Ga0075421_1025421602	3300006845	Populus Rhizosphere	LRKAKVDFHYELYSGADHGFSTPQNAAEERANVQSIASSTRYLKEVFGR*
Ga0075421_1026521852	3300006845	Populus Rhizosphere	YSGTGHGFSTPKNKDEERANAQSIASTARTLKELFGI*
Ga0075419_102159611	3300006969	Populus Rhizosphere	RGAKVPFQLEVYSGTGHGFSTPKNKAEERANVQSIASTARTLKELFGI*
Ga0099828_117201141	3300009089	Vadose Zone Soil	PFQLEVYSGTGHGFSTPKNKDEERANAQSIASTARTLKELFGI*
Ga0075418_127308801	3300009100	Populus Rhizosphere	VPFQLEVYSGTGHGYSTPKNKDEERANAQSLASSARFLKEIFNGE*
Ga0099792_105732001	3300009143	Vadose Zone Soil	KIDWQFELYSGTKHGFSTPKNADEERANAQSQGSMARFFKEVFGI*
Ga0114129_135255432	3300009147	Populus Rhizosphere	YSGAGHGFYRPVGRDNERALEQSIASTTRMLREVFGP*
Ga0111538_119665381	3300009156	Populus Rhizosphere	EVYSGAGHGFSSPKGQDNERANAQSIASTARNLREVFGE*
Ga0103869_101592641	3300009257	River Water	EVYSGTEHGFSTPKNKDEERANTQSIAAASRTMKDLFGM*
Ga0126307_101775341	3300009789	Serpentine Soil	QVELYSGTAHGFSRPKNKAEERANAQSIDTTGRTLKELFGI*
Ga0126374_111888041	3300009792	Tropical Forest Soil	EVYSGTGHGFSSPKNKAEERANAQSIASTSRTLKELFGS*
Ga0126374_114217341	3300009792	Tropical Forest Soil	SGTGHGFSAPKNKAEERANAQSIASTARLFKEVFGN*
Ga0126309_112461052	3300010039	Serpentine Soil	QYELYSGAGHGFSTPRNKAEERANVQSVASTERFLKEVFGR*
Ga0126380_102604711	3300010043	Tropical Forest Soil	TGHGFSTPKNKAEERANAQSIASTGRTLKELFGI*
Ga0126382_105964611	3300010047	Tropical Forest Soil	WKVPFQLEVYSGTGHGFSTPKNEAEERANAQSIASTARTLKELFGI*
Ga0126382_113900682	3300010047	Tropical Forest Soil	AWKVPFQLEVYSGTGHGFSTPKNEAEERANAQSIASTARTLKEPFGI*
Ga0134111_101045681	3300010329	Grasslands Soil	SAKVPFQLEVYSGTGHGFSTPKNKAEERANAQSIGTTARTLKELFGI*
Ga0134071_100748732	3300010336	Grasslands Soil	EVYSGTGHGFSTPKNKAEERANAQSIDSTARTLKEVFGM*
Ga0126376_104569651	3300010359	Tropical Forest Soil	RTGHGFSRPKNKDEERANTQSIETTARTLKELFGT*
Ga0126376_121018442	3300010359	Tropical Forest Soil	FQLEVYSGTGHGFSSPRNKAEERANTESVATATRTLRELFGI*
Ga0126372_111818952	3300010360	Tropical Forest Soil	KAAKTPFEVELYSGTAHGFSQPKDRAEERAITQAKATTGRTLKELFGV*
Ga0126377_101278221	3300010362	Tropical Forest Soil	SGTGHGFSSPKNKAEERANAQSIATTSRTMKELFGI*
Ga0126377_114161312	3300010362	Tropical Forest Soil	FQLEVYSGTGHGFSTPKNKDEERANTQSIATTGRTLKELFGI*
Ga0126377_132161701	3300010362	Tropical Forest Soil	GFSTPKNKAEERANAQSIASTARTLKELFGTGLPGLP*
Ga0126381_10002451011	3300010376	Tropical Forest Soil	WQLELYSGTKHGFSTPKNADEERADAQSRASMARFFKEVFGI*
Ga0126381_1029589002	3300010376	Tropical Forest Soil	LRAWKVPFQLEVYSGTGHGFSTPKNKAEVRANAQSIASTARTLKELFGI*
Ga0126381_1039447712	3300010376	Tropical Forest Soil	WQLELYSGTKHGFSTPKNADEERADAQSRASMARFFKEVFGS*
Ga0126383_105366023	3300010398	Tropical Forest Soil	LYSGTAHGFSQPKDKAEERAITQAKATTGRTLKELFGV*
Ga0126383_114475941	3300010398	Tropical Forest Soil	SGTGHGFSSPKNKAEERANAQSIDTTARTLKELFGS*
Ga0126383_128898852	3300010398	Tropical Forest Soil	GTGHGFSTPKNKDEERANEQSIGTTARALKELFGI*
Ga0137391_104399484	3300011270	Vadose Zone Soil	GTGHGFSSPKNKAEERANAQSIGATARTLKELFGI*
Ga0137391_107596353	3300011270	Vadose Zone Soil	EVYSGTGHGFSTPKNKAEERANAQSIGATARTLKELFGI*
Ga0137389_101682083	3300012096	Vadose Zone Soil	QVEVYSGTAHGFSTPKNKDEERANAQSIATTARTLKELFGI*
Ga0137388_111748511	3300012189	Vadose Zone Soil	SGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI*
Ga0137399_101021363	3300012203	Vadose Zone Soil	EVYSGTGHGFSSPKGKDEERANAQSIASTSRTMKELFGI*
Ga0137399_116495121	3300012203	Vadose Zone Soil	EVYSGTGHGFSSPKNKAEERANAQSIGATARTLKELFGI*
Ga0137367_109669741	3300012353	Vadose Zone Soil	SGTGHGFSTPKNKAEERANAQSIGATARTLKELFGI*
Ga0137371_103523604	3300012356	Vadose Zone Soil	EVYSGTGHGFSTPKNKAEERANEQSIGTTARTLKELFGI*
Ga0137384_100503171	3300012357	Vadose Zone Soil	LEVYSGTGHGFSTPKNKAEERANAQSIASTTRTLKELFGI*
Ga0137384_106501692	3300012357	Vadose Zone Soil	PFQLEVYSGTGHGFSTPKNKAEERANTQSIATTARTFKELFGI*
Ga0137384_116022251	3300012357	Vadose Zone Soil	TGHGFSTPKNKAEERANAQSIGATARTLKELFGI*
Ga0137360_116950342	3300012361	Vadose Zone Soil	VYSGTGHGFSTPKNKAEERANAQSIDTTARTLKELFGI*
Ga0137390_108086051	3300012363	Vadose Zone Soil	SGTGHGFSTPKNKAEERANAQSIGAPARTLKELFGI*
Ga0150984_1115586652	3300012469	Avena Fatua Rhizosphere	GTGHGFSSPKGKDEERANAQSIATTSRTMKELFGI*
Ga0137397_107104852	3300012685	Vadose Zone Soil	SGTGHGFSSPKGKDEERANAQSIATTSKAFKELFGI*
Ga0157291_104032291	3300012902	Soil	EVYSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI*
Ga0137396_110255641	3300012918	Vadose Zone Soil	SGAGHGFSVPKNKDEERANAQSIATTSRFLKDVFGI*
Ga0137413_107876031	3300012924	Vadose Zone Soil	FQLEVYSGTGHGFSTPKNKAEERANAQSIASTGRTLKELFGI*
Ga0137407_120373933	3300012930	Vadose Zone Soil	GTGHGFSSPKNQAEERANAQSIASTARTLKEIFGI*
Ga0137410_106208932	3300012944	Vadose Zone Soil	VYSGTGHGFSAPKNKSEERANDTSIASTARTFKELFGI*
Ga0164298_100393101	3300012955	Soil	GTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI*
Ga0164303_100230731	3300012957	Soil	PFQLEVYSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI*
Ga0164302_108811292	3300012961	Soil	YSGTGHGFSSPKGKDEERANAQSIGTTSRTMKELFGI*
Ga0126369_104219112	3300012971	Tropical Forest Soil	ELYSGTAHGFSQPKDKAEERAITQAKATTGRTLKELFGV*
Ga0126369_113376411	3300012971	Tropical Forest Soil	SGTGHGFSTPKNKAEERANAQSIASTARTLKEVFGI*
Ga0134110_106291392	3300012975	Grasslands Soil	FQLEVYSGTGHGFSTPKNKAEERANAQSIDSTARTLKEVFGM*
Ga0164305_117846322	3300012989	Soil	VPFQLEVYSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI*
Ga0157380_117193631	3300014326	Switchgrass Rhizosphere	VEVYSGAGHGFSSPKGQDNERANAQSIASTARNLREVFGD*
Ga0180078_10420212	3300014865	Soil	PFQLEVYSGTAHGFSAPKNKAEERANAQSIASAARLFKELFGI*
Ga0157379_116251742	3300014968	Switchgrass Rhizosphere	VYSGTGHGFSSPKGKDEERANAQSIATTSRAFKELFGI*
Ga0134089_102770022	3300015358	Grasslands Soil	YSGTGHGFSTPKNKAEERANAQSIDSTARTLKEVFGM*
Ga0132257_1034713181	3300015373	Arabidopsis Rhizosphere	FQLEVYSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI*
Ga0182041_106121521	3300016294	Soil	KVPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0182041_119820773	3300016294	Soil	KVPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKDLFGI
Ga0182032_115942601	3300016357	Soil	LKAAKTPFEVELYSGTAHGFSQPKNKAEERAITQANATTGRTLKELFGV
Ga0182034_108985372	3300016371	Soil	VYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0182034_113542911	3300016371	Soil	PFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0182040_104100623	3300016387	Soil	FEFELYSGTGHGFSNPKNKDEERANAESIATTTRTLKQLFGS
Ga0182037_112004232	3300016404	Soil	FEVELYSGTAHGFSQPKNKAEERAIAQANATTGRTLKELFGV
Ga0182039_118257851	3300016422	Soil	SGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0182038_100623541	3300016445	Soil	QLEVYSGTGHGFSTPKNGAEERANAQSTASTARTLRELFGI
Ga0184632_101902652	3300018075	Groundwater Sediment	PFQLEVYSGTGHGFSDPKNKAEERANAQSIASTARTLKELFGI
Ga0184625_104783541	3300018081	Groundwater Sediment	EVYSGTGHGFSSPKGKDEERANSQSIATTSRTMKELFGI
Ga0190272_108123561	3300018429	Soil	YSGAGHGFSVPKNKAEERANAQSIAATTRFLKEIFGD
Ga0066655_110713891	3300018431	Grasslands Soil	YSGTGHGFSTPKNKAEERANAQSIDSTARTLKEVFGM
Ga0066662_116756931	3300018468	Grasslands Soil	SGTAHGFSAPKNKAEERAHAQSIDTAARTFKELFGI
Ga0190274_120604721	3300018476	Soil	YSGAGHGFSTPKGPDNERANTQSIAATARNLREVFGD
Ga0173481_103435851	3300019356	Soil	GAGHGFSTPKGPDNERANTQSIASATRNLREVFGP
Ga0210407_107731751	3300020579	Soil	ELKAAKTPFEVELYSGTAHGFSQPKNKAEERAITQAKATTGRTLKELFGV
Ga0210401_102585681	3300020583	Soil	LYSGTAHGFSQPKNKAEERAITQAKATAGRTLKELFGV
Ga0210380_103557652	3300021082	Groundwater Sediment	SGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI
Ga0210380_105291731	3300021082	Groundwater Sediment	VYSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI
Ga0179596_103874212	3300021086	Vadose Zone Soil	ELYSGAGHGFSTPKDKAEERANVQSIASTERFLKEVFAR
Ga0179596_103938962	3300021086	Vadose Zone Soil	AKTPFEVELYSGTAHGFSQPKNKAEERAITQAKATTGRTLKELFGV
Ga0210405_113842172	3300021171	Soil	FEVELYSGTAHGFSEPKNKAEERAITQAKATTGRTLKELFGV
Ga0210408_109135991	3300021178	Soil	ELKVAKTPFEVELYSGTAHGFSEPKNKAEERAITQAKATTGRTLKELFGV
Ga0210383_115022232	3300021407	Soil	KMPFEVEIYSGTAHGFSEPKNKAEERAITQAKATTGRTLKELFGV
Ga0210384_109115511	3300021432	Soil	YSGTAHGFSQPKNKAEERAITQAKATAGRTLKELFGV
Ga0210392_104910361	3300021475	Soil	SRVPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTTRTLKELFGI
Ga0210410_106870171	3300021479	Soil	KTPFEVELYSGTAHGFSEPKNMAEERAITQAKATTGRTLKELFGV
Ga0213853_116203611	3300021861	Watersheds	PIELKAAKTPFEVELYSGTAHGFSQPKNKAEERAITQAKATTGRTLKELFGV
Ga0242654_100681301	3300022726	Soil	KTPFEVELYSGTAHGFSQPKNKAEERAITQAKATTGRTLKELFGV
Ga0193714_10229362	3300023058	Soil	GTGHGFSSPKGKDEERANAQSIATTSRTMKELFGI
Ga0207693_100828381	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	EVYSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGI
Ga0207662_110785861	3300025918	Switchgrass Rhizosphere	VYSGAGHGFSSPKGQDNERANTQSIASTARNLREVFGD
Ga0207708_100985241	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	KVPFQLEVYSGTGHAFSTPKNKDEERANAQSIASTGRTLKELFGI
Ga0209350_10286041	3300026277	Grasslands Soil	EVYSGTGHGFSTPKNKAEERANAQSIASTTRTLKELFGI
Ga0209350_10721763	3300026277	Grasslands Soil	EVYSGTGHGFSTPKNKAEERANAQSIGATARTLKELFGI
Ga0209761_13057892	3300026313	Grasslands Soil	SGTGHGFSTPKNKAEERANAQSIGATARTLKELFGI
Ga0209157_10284294	3300026537	Soil	QLEVYSGTGHGFSTPKNKAEERANAQSIDSTARTLKEVFGM
Ga0209845_10112911	3300027324	Groundwater Sand	PFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLREVFGL
Ga0209179_10927122	3300027512	Vadose Zone Soil	VPFQLEVYSGTGHGFSSPKGKDEERANAQSIASTSRTMKELFGI
Ga0209074_100830671	3300027787	Agricultural Soil	EVYSGTGHGFSIPKGKDEERANAQSIGTTSRTMKELFGI
Ga0209580_102051812	3300027842	Surface Soil	KVPFELEVYSGTAHGFSTPKNKAEERANATSIATTARTLKELFGI
Ga0209579_100994673	3300027869	Surface Soil	EVELYSGTKHGFSQPKNEAEKRAITQAKATTGRTLKELFGV
Ga0209481_101888602	3300027880	Populus Rhizosphere	AKVPFQLEVYSGTGHGFSTPKNKAEERANVQSIASTARTLKELFGI
Ga0209590_105116671	3300027882	Vadose Zone Soil	YSGTGHGFSTPKNKDEERANAQSIASTARTLKELFGI
Ga0209488_109595141	3300027903	Vadose Zone Soil	YSGTGHGFSTPKNKAEERANAQSIGATARTLKELFGI
Ga0209889_10835621	3300027952	Groundwater Sand	EIYSGSGHGFSTPKNKDEERANTQSISSTARTMKEVFGM
Ga0209526_106458872	3300028047	Forest Soil	KTPFEVELYSGTAHGFSEPKNKAEERAITQAKATAGRTLKELFGV
Ga0137415_101057721	3300028536	Vadose Zone Soil	KTPFQLEVYSGTGHGFSSPKGKDEERANSQSIATTSRTMKELFGI
Ga0137415_113854501	3300028536	Vadose Zone Soil	EVYSGTGHGFSSPKNKAEEHANAESIATTTRTLKELFGS
Ga0307297_103087872	3300028754	Soil	MVPFQLEVYSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGM
Ga0307306_100813673	3300028782	Soil	GTGHGFSTPKNKDEERANAQSIASTGRTLKELFGM
Ga0247825_100809631	3300028812	Soil	YSGAGHGFSTPKGPDNERANTQSIASATRNLREVFGP
Ga0307314_100411951	3300028872	Soil	YSGTGHGFSTPKNKDEERANAQSIASTGRTLKELFGM
Ga0308197_103107092	3300031093	Soil	VYSGTGHGFSSPKGKDEERANAQSIATTSRTMKELFGI
Ga0318515_106727892	3300031572	Soil	RAWKVPFQLEVYSGTGHGFSTPKNGAEERANAQSTASTARTLRELFGI
Ga0318561_105426491	3300031679	Soil	LEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0318561_106254472	3300031679	Soil	VPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0318561_108261992	3300031679	Soil	FQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0318560_103998721	3300031682	Soil	AWKVPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0306917_100228505	3300031719	Soil	AARVEFQYELYSGAEHGFSTPRNKAEERANAQSIAATARFLKESFGM
Ga0306917_108485423	3300031719	Soil	WKVPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0307468_1014603911	3300031740	Hardwood Forest Soil	ELYSGTAHGFSQPKNKAEERAIAQAKATTGRTLKELFGV
Ga0307468_1024961801	3300031740	Hardwood Forest Soil	EVYSGTGHGYSTPKNKDEERANAQSLVSSARFLKQVFNGE
Ga0306918_108069421	3300031744	Soil	VELYSGTAHGFSQPKDKAEERAITQAKATTGRTLKELFGV
Ga0318554_103720752	3300031765	Soil	PFEFELYSGTGHGFSNPKNKDEERANAESIVTTTRTLKQLFGS
Ga0318509_102318271	3300031768	Soil	FQLEVYSGTGHGFSTPKNEAEERANAQSIASTARTLKELFGI
Ga0318521_106231782	3300031770	Soil	LYSGAEHGFSTPRNKAEERANAQSIAATARFLKESFGM
Ga0318550_105864512	3300031797	Soil	VELYSGTAHGFSQPKNKAEERAITQANATTGQTLKELFGV
Ga0310917_105907271	3300031833	Soil	EVYSGTGHGFSTPKNGAEERANAQSTASTARTLRELFGI
Ga0318517_104914052	3300031835	Soil	QLEVYSGTGHGFSTPKNKAEERANAQSIASTVRTLKELFGI
Ga0318520_109241222	3300031897	Soil	TSNWKVPFQLEVYSGTGHGFSTPKNEAEERANAQSIASTARTLKELFGI
Ga0306923_111309962	3300031910	Soil	WKVPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKDLFGI
Ga0306921_101613751	3300031912	Soil	FELYSGTGHGFSNPKNKDEERANAESIVTTTRTLKQLFGS
Ga0310909_115627151	3300031947	Soil	YSGTAHGFSQPKNKAEERAITQANATTGRTLKELFGV
Ga0318530_100229611	3300031959	Soil	AWKVPFQLEVYSSTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0307409_1017684472	3300031995	Rhizosphere	GAGHGFSVPKNKAEERANAQSIAATARFLKETFGE
Ga0306922_120555011	3300032001	Soil	KAAQTPFEVELYSGTAHGFSQPKNKAEERAITQAKATTGRTLKELFGV
Ga0318549_103770742	3300032041	Soil	YSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0318558_103520931	3300032044	Soil	ELRTWKTPFQLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0318533_106889731	3300032059	Soil	VYSGTGHGFSTPKNKAEERANAQSIASTGRTLKELFGI
Ga0318533_111938202	3300032059	Soil	VYSGTAHGFSTPKNKDEERANATSIATTARTLKELFGI
Ga0318553_101939732	3300032068	Soil	YSGAGHGFSTPRNKAEERANAQSIAATARFLKESFGM
Ga0318540_103510681	3300032094	Soil	QLEVYSGTGHGFSTPKNKAEERANAQSIASTARTLKELFGI
Ga0306920_1038892892	3300032261	Soil	AQRPFQLEVYSGTGHGFSSPKNKDEERANAQSIDTTARTLKELFGS
Ga0306920_1041212452	3300032261	Soil	VYSGTGHGFSTPKNKAEERANAQSIASTARTLKDLFGI
Ga0247829_111799012	3300033550	Soil	SGTGHGFSAPKNKAEERANARSIESAARTLKELFGI
Ga0370495_0081170_880_993	3300034257	Untreated Peat Soil	YSGTGHGFSTPKNKAEERANVQSIDSTARTLKELFGN

Hidden Markov Model


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