NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F033174

Metagenome / Metatranscriptome Family F033174

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F033174
Family Type Metagenome / Metatranscriptome
Number of Sequences 178
Average Sequence Length 77 residues
Representative Sequence MSRQAFGWIVVVTDPSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVTMLSQRAVTVQLRLKPGEVAQIT
Number of Associated Samples 137
Number of Associated Scaffolds 178

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 43.82 %
% of genes near scaffold ends (potentially truncated) 31.46 %
% of genes from short scaffolds (< 2000 bps) 90.45 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (70.787 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(11.798 % of family members)
Environment Ontology (ENVO) Unclassified
(24.157 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.382 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.89%    β-sheet: 33.66%    Coil/Unstructured: 55.45%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 178 Family Scaffolds
PF02798GST_N 2.81
PF07045DUF1330 2.81
PF02403Seryl_tRNA_N 1.69
PF03979Sigma70_r1_1 1.69
PF13417GST_N_3 1.69
PF07883Cupin_2 1.69
PF00216Bac_DNA_binding 1.69
PF00587tRNA-synt_2b 1.69
PF00270DEAD 1.12
PF00313CSD 1.12
PF01127Sdh_cyt 1.12
PF01925TauE 1.12
PF13490zf-HC2 0.56
PF04545Sigma70_r4 0.56
PF00171Aldedh 0.56
PF04028DUF374 0.56
PF02026RyR 0.56
PF00462Glutaredoxin 0.56
PF03547Mem_trans 0.56
PF04546Sigma70_ner 0.56
PF04303PrpF 0.56
PF13560HTH_31 0.56
PF10294Methyltransf_16 0.56
PF028262-Hacid_dh_C 0.56
PF05050Methyltransf_21 0.56
PF14319Zn_Tnp_IS91 0.56
PF13545HTH_Crp_2 0.56
PF01975SurE 0.56
PF13183Fer4_8 0.56
PF06186DUF992 0.56
PF04392ABC_sub_bind 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 178 Family Scaffolds
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 2.81
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 2.25
COG0172Seryl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.69
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 1.69
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 1.12
COG2009Succinate dehydrogenase/fumarate reductase, cytochrome b subunitEnergy production and conversion [C] 1.12
COG2142Succinate dehydrogenase, hydrophobic anchor subunitEnergy production and conversion [C] 1.12
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.56
COG0496Broad specificity polyphosphatase and 5'/3'-nucleotidase SurEReplication, recombination and repair [L] 0.56
COG0679Predicted permease, AEC (auxin efflux carrier) familyGeneral function prediction only [R] 0.56
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.56
COG2121Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamilyFunction unknown [S] 0.56
COG28282-Methylaconitate cis-trans-isomerase PrpF (2-methyl citrate pathway)Energy production and conversion [C] 0.56
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.56
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.56


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.79 %
All OrganismsrootAll Organisms29.21 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918013|NODE_216486_length_2331_cov_10.289576Not Available2363Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0698348Not Available2389Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_11148222Not Available1720Open in IMG/M
3300000550|F24TB_12564428Not Available853Open in IMG/M
3300000559|F14TC_110440745Not Available680Open in IMG/M
3300000890|JGI11643J12802_12047402Not Available1725Open in IMG/M
3300000955|JGI1027J12803_100999714Not Available567Open in IMG/M
3300000956|JGI10216J12902_104709295All Organisms → cellular organisms → Bacteria → Proteobacteria1543Open in IMG/M
3300003659|JGI25404J52841_10087466Not Available651Open in IMG/M
3300004156|Ga0062589_102348058Not Available549Open in IMG/M
3300004268|Ga0066398_10150776Not Available583Open in IMG/M
3300004479|Ga0062595_101179932Not Available677Open in IMG/M
3300004633|Ga0066395_10521098Not Available688Open in IMG/M
3300005093|Ga0062594_101018248Not Available799Open in IMG/M
3300005093|Ga0062594_103391682Not Available501Open in IMG/M
3300005332|Ga0066388_100067658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3852Open in IMG/M
3300005332|Ga0066388_100161182All Organisms → cellular organisms → Bacteria2833Open in IMG/M
3300005332|Ga0066388_103739857All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales776Open in IMG/M
3300005332|Ga0066388_105407172Not Available647Open in IMG/M
3300005341|Ga0070691_10945468Not Available534Open in IMG/M
3300005347|Ga0070668_100300526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1346Open in IMG/M
3300005347|Ga0070668_102185584Not Available511Open in IMG/M
3300005365|Ga0070688_100915423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales692Open in IMG/M
3300005367|Ga0070667_101674898All Organisms → cellular organisms → Bacteria → Proteobacteria598Open in IMG/M
3300005435|Ga0070714_101936801Not Available575Open in IMG/M
3300005441|Ga0070700_100082677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2077Open in IMG/M
3300005441|Ga0070700_100216467All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1355Open in IMG/M
3300005441|Ga0070700_101694013Not Available542Open in IMG/M
3300005455|Ga0070663_100108094Not Available2086Open in IMG/M
3300005545|Ga0070695_101868055Not Available504Open in IMG/M
3300005548|Ga0070665_100869430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium914Open in IMG/M
3300005563|Ga0068855_101825498Not Available617Open in IMG/M
3300005615|Ga0070702_100985277Not Available666Open in IMG/M
3300005713|Ga0066905_100188507Not Available1529Open in IMG/M
3300005713|Ga0066905_100266425Not Available1326Open in IMG/M
3300005713|Ga0066905_100821976Not Available807Open in IMG/M
3300005713|Ga0066905_102158564Not Available519Open in IMG/M
3300005719|Ga0068861_101232935All Organisms → cellular organisms → Bacteria → Proteobacteria725Open in IMG/M
3300005764|Ga0066903_102865271Not Available935Open in IMG/M
3300005764|Ga0066903_104665908Not Available730Open in IMG/M
3300005764|Ga0066903_105488330Not Available669Open in IMG/M
3300005764|Ga0066903_108151439Not Available536Open in IMG/M
3300005841|Ga0068863_102054830Not Available581Open in IMG/M
3300005843|Ga0068860_101507252Not Available694Open in IMG/M
3300005937|Ga0081455_10008556Not Available10622Open in IMG/M
3300005937|Ga0081455_10138388All Organisms → cellular organisms → Bacteria → Proteobacteria1894Open in IMG/M
3300005983|Ga0081540_1074133Not Available1560Open in IMG/M
3300006038|Ga0075365_10052201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2703Open in IMG/M
3300006042|Ga0075368_10284754Not Available711Open in IMG/M
3300006173|Ga0070716_101322357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium583Open in IMG/M
3300006178|Ga0075367_10251862All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300006196|Ga0075422_10115197Not Available1045Open in IMG/M
3300006797|Ga0066659_10922516All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300006844|Ga0075428_100272907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1819Open in IMG/M
3300006844|Ga0075428_100312235All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella pratensis1690Open in IMG/M
3300006846|Ga0075430_101370940Not Available581Open in IMG/M
3300006847|Ga0075431_100274893All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300006852|Ga0075433_10663299Not Available914Open in IMG/M
3300006852|Ga0075433_10879616Not Available782Open in IMG/M
3300006854|Ga0075425_100888445All Organisms → cellular organisms → Bacteria → Proteobacteria1019Open in IMG/M
3300006881|Ga0068865_100724718Not Available852Open in IMG/M
3300006904|Ga0075424_100983691Not Available900Open in IMG/M
3300006914|Ga0075436_100524201Not Available868Open in IMG/M
3300006953|Ga0074063_12540622Not Available580Open in IMG/M
3300006954|Ga0079219_10019512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium2480Open in IMG/M
3300007076|Ga0075435_100499603Not Available1051Open in IMG/M
3300007076|Ga0075435_100817119Not Available812Open in IMG/M
3300009092|Ga0105250_10505097Not Available549Open in IMG/M
3300009094|Ga0111539_10698021Not Available1181Open in IMG/M
3300009094|Ga0111539_13462977Not Available507Open in IMG/M
3300009098|Ga0105245_12637213Not Available556Open in IMG/M
3300009156|Ga0111538_10186256All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → Bosea psychrotolerans2635Open in IMG/M
3300009156|Ga0111538_10625513All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1365Open in IMG/M
3300009156|Ga0111538_11003676All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300009162|Ga0075423_10916630Not Available929Open in IMG/M
3300009553|Ga0105249_13085819Not Available535Open in IMG/M
3300009609|Ga0105347_1035927All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin0381743Open in IMG/M
3300010043|Ga0126380_10102030Not Available1724Open in IMG/M
3300010043|Ga0126380_10411596Not Available1008Open in IMG/M
3300010046|Ga0126384_10147834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1805Open in IMG/M
3300010046|Ga0126384_11616532Not Available610Open in IMG/M
3300010047|Ga0126382_10038133Not Available2707Open in IMG/M
3300010047|Ga0126382_10622409Not Available892Open in IMG/M
3300010047|Ga0126382_10924219Not Available757Open in IMG/M
3300010048|Ga0126373_11020094Not Available893Open in IMG/M
3300010358|Ga0126370_11806578Not Available592Open in IMG/M
3300010359|Ga0126376_10048798Not Available2983Open in IMG/M
3300010359|Ga0126376_10421303All Organisms → cellular organisms → Bacteria → Proteobacteria1210Open in IMG/M
3300010359|Ga0126376_11429393Not Available717Open in IMG/M
3300010360|Ga0126372_11234624Not Available773Open in IMG/M
3300010362|Ga0126377_11331485Not Available790Open in IMG/M
3300010366|Ga0126379_10701872Not Available1105Open in IMG/M
3300010366|Ga0126379_11344101Not Available821Open in IMG/M
3300010371|Ga0134125_10930416Not Available954Open in IMG/M
3300010396|Ga0134126_12888752Not Available520Open in IMG/M
3300010400|Ga0134122_10150973All Organisms → cellular organisms → Bacteria1889Open in IMG/M
3300010400|Ga0134122_10244246Not Available1513Open in IMG/M
3300010400|Ga0134122_11182901Not Available764Open in IMG/M
3300010403|Ga0134123_12638439Not Available570Open in IMG/M
3300010403|Ga0134123_12692223Not Available565Open in IMG/M
3300010863|Ga0124850_1042583Not Available1441Open in IMG/M
3300012951|Ga0164300_10324614All Organisms → cellular organisms → Bacteria → Proteobacteria815Open in IMG/M
3300012951|Ga0164300_10510414Not Available689Open in IMG/M
3300012957|Ga0164303_10070069Not Available1633Open in IMG/M
3300012957|Ga0164303_10158277All Organisms → cellular organisms → Bacteria → Proteobacteria1208Open in IMG/M
3300012957|Ga0164303_10798993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium649Open in IMG/M
3300012971|Ga0126369_11497471Not Available765Open in IMG/M
3300013296|Ga0157374_10774592Not Available975Open in IMG/M
3300014326|Ga0157380_11309504All Organisms → cellular organisms → Bacteria → Proteobacteria772Open in IMG/M
3300014968|Ga0157379_12590273All Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300014969|Ga0157376_10718593Not Available1006Open in IMG/M
3300015258|Ga0180093_1020635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1356Open in IMG/M
3300015371|Ga0132258_10221294All Organisms → cellular organisms → Bacteria4605Open in IMG/M
3300015371|Ga0132258_10269695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium4171Open in IMG/M
3300015371|Ga0132258_11197094Not Available1921Open in IMG/M
3300016270|Ga0182036_11223426Not Available625Open in IMG/M
3300016294|Ga0182041_10837000Not Available824Open in IMG/M
3300016319|Ga0182033_10133283All Organisms → cellular organisms → Bacteria1890Open in IMG/M
3300016387|Ga0182040_10450815All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300016422|Ga0182039_10577977Not Available980Open in IMG/M
3300017970|Ga0187783_11359787Not Available512Open in IMG/M
3300017975|Ga0187782_11432680Not Available543Open in IMG/M
3300017993|Ga0187823_10046638Not Available1181Open in IMG/M
3300018079|Ga0184627_10466891Not Available655Open in IMG/M
3300018469|Ga0190270_11204175All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300018469|Ga0190270_12000598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales638Open in IMG/M
3300018476|Ga0190274_11772573Not Available712Open in IMG/M
3300019361|Ga0173482_10088080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1102Open in IMG/M
3300021476|Ga0187846_10062426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1634Open in IMG/M
3300021478|Ga0210402_11887313Not Available523Open in IMG/M
3300021560|Ga0126371_10154459Not Available2359Open in IMG/M
3300025885|Ga0207653_10156766Not Available841Open in IMG/M
3300025927|Ga0207687_11086380Not Available687Open in IMG/M
3300025937|Ga0207669_10543133Not Available937Open in IMG/M
3300025938|Ga0207704_10775797Not Available799Open in IMG/M
3300025972|Ga0207668_10263338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1406Open in IMG/M
3300025972|Ga0207668_10729106Not Available873Open in IMG/M
3300026075|Ga0207708_10644151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium901Open in IMG/M
3300026075|Ga0207708_12020632All Organisms → cellular organisms → Bacteria → Proteobacteria505Open in IMG/M
3300026088|Ga0207641_11641630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium645Open in IMG/M
3300027516|Ga0207761_1120775Not Available510Open in IMG/M
3300027646|Ga0209466_1044243Not Available903Open in IMG/M
3300027680|Ga0207826_1150787Not Available635Open in IMG/M
3300027703|Ga0207862_1072243Not Available1037Open in IMG/M
3300027775|Ga0209177_10093843Not Available940Open in IMG/M
3300027815|Ga0209726_10141163All Organisms → cellular organisms → Bacteria1364Open in IMG/M
3300027907|Ga0207428_10526926Not Available856Open in IMG/M
3300027909|Ga0209382_10280411Not Available1884Open in IMG/M
3300027909|Ga0209382_11737511Not Available610Open in IMG/M
3300028381|Ga0268264_11409713Not Available707Open in IMG/M
3300030336|Ga0247826_10043195Not Available2445Open in IMG/M
3300031184|Ga0307499_10040874Not Available1098Open in IMG/M
3300031561|Ga0318528_10629993Not Available575Open in IMG/M
3300031572|Ga0318515_10322094Not Available829Open in IMG/M
3300031573|Ga0310915_10879828Not Available628Open in IMG/M
3300031668|Ga0318542_10670847Not Available542Open in IMG/M
3300031719|Ga0306917_10960923Not Available668Open in IMG/M
3300031720|Ga0307469_11043888Not Available765Open in IMG/M
3300031724|Ga0318500_10207889Not Available940Open in IMG/M
3300031740|Ga0307468_100476721Not Available981Open in IMG/M
3300031744|Ga0306918_10024573All Organisms → cellular organisms → Bacteria3710Open in IMG/M
3300031770|Ga0318521_10429047Not Available790Open in IMG/M
3300031797|Ga0318550_10443399Not Available628Open in IMG/M
3300031908|Ga0310900_11479595Not Available572Open in IMG/M
3300031910|Ga0306923_10289869All Organisms → cellular organisms → Bacteria1871Open in IMG/M
3300031941|Ga0310912_11484720Not Available511Open in IMG/M
3300031954|Ga0306926_10649499Not Available1284Open in IMG/M
3300032001|Ga0306922_11513506All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300032003|Ga0310897_10257205Not Available784Open in IMG/M
3300032025|Ga0318507_10257352All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300032059|Ga0318533_11262932Not Available540Open in IMG/M
3300032068|Ga0318553_10421906Not Available699Open in IMG/M
3300032094|Ga0318540_10452458Not Available620Open in IMG/M
3300032174|Ga0307470_10092946Not Available1703Open in IMG/M
3300032174|Ga0307470_10450599Not Available925Open in IMG/M
3300032174|Ga0307470_11514462All Organisms → cellular organisms → Bacteria → Proteobacteria558Open in IMG/M
3300034690|Ga0364923_0013873Not Available1775Open in IMG/M
3300034773|Ga0364936_102776Not Available563Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil10.67%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.62%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.62%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.25%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere2.25%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.69%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.69%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.12%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.12%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.12%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.12%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.12%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.56%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.56%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.56%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.56%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.56%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918013Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)EnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003659Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015258Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1DaEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300034690Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17EnvironmentalOpen in IMG/M
3300034773Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_015454902140918013SoilMTEQAFGWIVIVTGPSGAKRYHVAIRNRVEAENAVRRRVAGAAIAHVEAVTMLSQRAVSVQLRLKPGDVVLIT
ICChiseqgaiiDRAFT_069834823300000033SoilMTEQAFGWIVIVTGPSGAKRYHVAIRNRVEAENAVRRRVAGAAIAHVEAVTMLSQRAVSVQLRLKPGDVVLIT*
ICChiseqgaiiFebDRAFT_1114822223300000363SoilLTTQAFGWIVAVTNPSGITRYHVAVRNRDDAVSAVRRRVIGAAAAQVEAVTMLSQGTVNKLLRLKPGEVAPIA*
F24TB_1256442813300000550SoilLAGIVRVEGRREQCHAAVMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVSAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLRPGDVAQVT*
F14TC_11044074523300000559SoilPGIVRVEGRREQCHAAVMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVSAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLRPGDVAQVT*
JGI11643J12802_1204740223300000890SoilQAFGWIVAVTNPSGITRYHVAVRNRDDAVSAVRRRVIGAAAAQVEAVTMLSQGTVNKLLRLKPGEVAPIA*
JGI1027J12803_10099971413300000955SoilASQSQNEAARLRVVGHREGCHVPCMSEQAFGWTVTVTGPSGVKQYHVAVRNRVEAVSAVRRRVAGAATADVEAVTMLSHRAVSVVLRLKPGEVVPVA*
JGI10216J12902_10470929533300000956SoilMSEQAFGWIVEVTGPDGTKRYHVAVRNRVEAANAVRRRVSGAKEARVEAVSMLSKRAVSIQLRLKPGEVAEIA*
JGI25404J52841_1008746613300003659Tabebuia Heterophylla RhizosphereLRSVESCHEQCHALFMSGQAFGWIVEVTDHSGTKRYHVAVRNRVEAANAVRRRVVGAAQAHVEAVTMLSQRAVTVLLRLKPGEVAQVK*
Ga0062589_10234805813300004156SoilMSDQAFGWTVAVTGPSGVKQYHVAVRNRVDAVSAVRRRVAGAATAHVEAVTMLSHRAVSVQLRLKPGEVVPAA*
Ga0066398_1015077613300004268Tropical Forest SoilMSDQAFGWIVEVTDRAGSRMYHVAVRNRVEAVDAVRRRVFGAPTAHVEAATMLSKRAVTVLLRLKPGEMAEIT*
Ga0062595_10117993213300004479SoilMSEQAFGWTVTVTDLSGIKRYHVAIKNRLAAVNAVRRRIAGAGIAHVEAGTMLSKRAVSVLHRLKPGDVVLIA*
Ga0066395_1052109823300004633Tropical Forest SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVRLRLKPGEMAEIT*
Ga0062594_10101824823300005093SoilVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0062594_10339168213300005093SoilLTQVAEAAQLGCMSEQAFGWTVTVTDPSGVKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0066388_10006765863300005332Tropical Forest SoilMSDQAFGWIVEVTNGAGSRKYHVAVRNRVEAADAVRRRVVGAGAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0066388_10016118243300005332Tropical Forest SoilMSDQAFGWIVEVTDRAGCRKYHIAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0066388_10373985713300005332Tropical Forest SoilMSGQAFGWIVEVSDHSGTKRYHVAIRNRVEAVNAVRQRVVGAALAHVEAVTMLSQRTITVLLRLKPGEVAQVT*
Ga0066388_10540717223300005332Tropical Forest SoilLAGVVRVEGRREQCHAAFMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAAPAHVEAVTMLSRRTVSVLLRLKPGEVAQVT*
Ga0070691_1094546813300005341Corn, Switchgrass And Miscanthus RhizosphereMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLR
Ga0070668_10030052613300005347Switchgrass RhizosphereMSEQAFGWTVAVTDPSGVKQYHVAVRNRVEAVSAVRRRVVGAATAHVEAVTMLSQRAVTILLRLKPGEVVPVT*
Ga0070668_10218558413300005347Switchgrass RhizosphereWVVAVTDRSGSRRYHVAVRNRMEAVNSVRRRVAGAATAHIEAVSMLSQRAVTVLLRLKPGDVAEAP*
Ga0070688_10091542313300005365Switchgrass RhizosphereRTIGFRSGSVSARPRVVGHREGCHGPAMSEQAFGWTVAVTDPSGVKQYHVAVRNRVEAVSAVRRRVVGAATAHVEAVTMLSQRAVTILLRLKPGEVVPVT*
Ga0070667_10167489813300005367Switchgrass RhizosphereAVTDPSGVKQYHVAVRNRVEAVSAVRRRVVGAATAHVEAVTMLSQRAVTILLRLKPGEVVPVT*
Ga0070714_10193680113300005435Agricultural SoilMSDQAFGWIVKVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAE
Ga0070700_10008267733300005441Corn, Switchgrass And Miscanthus RhizosphereMSEQAFGWVIAVTDPAEVRRYHVAIKNRVEAVSAVRRRVQGAALAHVEAVTMLSKRTVTVLLRLKPGEVVQIA*
Ga0070700_10021646723300005441Corn, Switchgrass And Miscanthus RhizosphereMSDQAFGWTVAVTGPSGVKQYHVAVRNRVDAVSAVRRRVAGAASAHVEAVTMLSHRAVSVQLRLKPGEVVPAA*
Ga0070700_10169401313300005441Corn, Switchgrass And Miscanthus RhizosphereVTDRSGSRRYHVAVRNRMEAVNSVRRRVAGAATAHIEAVSMLSQRAVTVLLRLKPGDVAEAP*
Ga0070663_10010809433300005455Corn RhizosphereLAGVVRVEDRREQCHAAFMSGQAFGWIVEVTDHSGTRRYHVAVRNRVEAVSAVRRRVVGAALAQVQAVTMLSQRTVAVLLRLKPGEVAQVT*
Ga0070695_10186805513300005545Corn, Switchgrass And Miscanthus RhizosphereSAPSNSRRNEQPRIAPREGWGRDRRPVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0070665_10086943013300005548Switchgrass RhizosphereMSEQAFGWTVTVTDPSGVRCYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0068855_10182549823300005563Corn RhizosphereCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0070702_10098527723300005615Corn, Switchgrass And Miscanthus RhizosphereMSEQAFGWVIAVTDPAEVRRYHVAIKNRVEAVSAVRRRVQGAALAHVEAVTMLSKRTVTVLLRLK
Ga0066905_10018850723300005713Tropical Forest SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVIGAAAAHVEAVTMLSKRAVTVLLRLKPGEM
Ga0066905_10026642523300005713Tropical Forest SoilMGPSNIGGADLYVRRQLRIVEGCREQCHPPFMSRQAFGWIVEVTDQSGTRRYHVAVRNRVEAVSAVRRRVVGAALARVEAVTMLSQRAVTVLLRLKPGEVAQVI*
Ga0066905_10082197613300005713Tropical Forest SoilMSDQAFGWIVEVTDGAGSRKYHVAVRNRVEAADAVRRRVIGAAAAQVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0066905_10215856423300005713Tropical Forest SoilTDHSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0068861_10123293523300005719Switchgrass RhizosphereMSDQAFGWTVAVTGPSGVKQYHVAVRNRVDAVSAVRRRVAGAASAHVEAVTMLSHRAVSVQLRLKPGE
Ga0066903_10286527113300005764Tropical Forest SoilMSDQAFGWIVEVTDRAGSRKYHVAVTNRVEAADAVRRRVLGAAAAHVEAVMMLSKRAVTVLLRLKPGELAEIT*
Ga0066903_10466590823300005764Tropical Forest SoilRREQCHAAFMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAAPAHVEAVTMLSRRTVSVLLRLKPGEVAQVT*
Ga0066903_10548833023300005764Tropical Forest SoilMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRQRVVGAALAHVEAVTMLSRRTVTVLLRLKPGEVAQVT*
Ga0066903_10815143913300005764Tropical Forest SoilVGGRSKARMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEATDAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEITSFPD*
Ga0068863_10205483023300005841Switchgrass RhizosphereMSEQAFGWIVAVTDPSGVKQYHVAVRNRVEAVSAVKRRVAGAAAAHVEAVSMLSQRAVTILLRLKPGEVVLVS*
Ga0068860_10150725213300005843Switchgrass RhizosphereWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0081455_10008556203300005937Tabebuia Heterophylla RhizosphereMGLTNEGGADLYVRTQSRIVEGCREECHPPFMSGQAFGWIVEVTDHSGTKQYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0081455_1013838823300005937Tabebuia Heterophylla RhizosphereMSGQAFGWIVEVSDHSGTKRYHVAIRNRVEAVNAVRQRVVGAALAHVEAVTMLSQRTITGLLRLKPGEVAQVT*
Ga0081540_107413343300005983Tabebuia Heterophylla RhizosphereLAGIVRVEGRREQCHAAVMSGQAFGWIVEVRDHSGTKRYHVAVRNRVEAVNAVRRRIVGADLAHVEAVTMLSQRTVTVSLRLKPGEVAQVT*
Ga0075365_1005220143300006038Populus EndosphereMSEQAFGWVVTVTDPSSGVKRYHVAVRNRVDAVSAVRRRVAGAAAAHVEAVTMLSQRDVTIQLRLKPGEVVLIP*
Ga0075368_1028475423300006042Populus EndosphereMSEQAFGWTVTVTDPSGVRRYHVVIKNRLAAMNAVRRRIAGAAVAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0070716_10132235733300006173Corn, Switchgrass And Miscanthus RhizosphereMSEQAFGWTVTVTGPSGVKQYHVAVKNRVEAVSAVRRRVVGAATADVEAVRMLSHRAVSVVLRLKPG
Ga0075367_1025186213300006178Populus EndosphereHVPCMSGQAFGWIVVVKDPSGIKRYHVAVRARAEAVSAVRRRVAGAAAAHVEAVTMLSQRAVTILLRLKPGEVVLVT*
Ga0075422_1011519713300006196Populus RhizosphereFMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAALAHVQAETMLSRRTVTVLLRLKPGEVAQVI*
Ga0066659_1092251613300006797SoilAFGWIVEVTDHAGTRKYHVAVRNRVEAVNAVRRRVAGAEGARIEAVSMLSQRAVNVQLRLKPGQVAQIT*
Ga0075428_10027290743300006844Populus RhizosphereLAGIVRVEGRREQCHAAVMSGQAFGWIVEVSNHSETKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRVVTVLLRLRPGDVAQVT*
Ga0075428_10031223543300006844Populus RhizosphereMSEQAFGWTVTVTDPSGVRRYHVAIKNRLAAMNAVRRRVAGAATAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0075430_10137094013300006846Populus RhizosphereLTQAPEAALFGCMSEQAFGWTVTVTDPSGVRRYHVAIKNRLAAMNAVRRRVAGAATAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0075431_10027489313300006847Populus RhizosphereMSEQAFGWTVTVTDPSGVRRYHVAIKNRLAAMNAVRRRVAGAATAHVEAGTMLSQRAVSVLLRLKPGDVVLMHDD
Ga0075433_1066329933300006852Populus RhizosphereGGRSEARMSDQAFGWIVKVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0075433_1087961613300006852Populus RhizosphereMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGQVAQVT*
Ga0075425_10088844533300006854Populus RhizosphereMSEQAFGWTVTVTGPSGVKQYHVAVKNRVEAVSAVRRRVVGAATANVEAVTMLSHRAVSFVLRLKPGEVVPVA*
Ga0068865_10072471823300006881Miscanthus RhizosphereEGWGRDRRPVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0075424_10098369123300006904Populus RhizosphereMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGQVAQLT*
Ga0075436_10052420133300006914Populus RhizosphereFMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAALAHVQAVTMLSRRTVTVLLRLKPGEVAQVT*
Ga0074063_1254062223300006953SoilCMSEQAFGWTVTVTGPSGVKQYHVAVRNRVEAVSAVRRRVVGAATADVEAVRMLSHRAVSVVLRLKPGEVVPVA*
Ga0079219_1001951243300006954Agricultural SoilLAGVVRVEGRSEQCHAAFMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAALAHVEAVTMLSQRTATVLLRLKPGEVAQVT*
Ga0075435_10049960313300007076Populus RhizosphereMSDQAFGWIVKVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0075435_10081711923300007076Populus RhizosphereMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGAALAHVEAVTMLSQRTATVLLRLKPGEVAQVT*
Ga0105250_1050509723300009092Switchgrass RhizosphereVLLRVVDHGEGCHGRRMSDQAFGWTVAVTGPSGVKQYHVAVRNRVDAVSAVRRRVAGAATAHVEAVTMLSHRAVSVQLRLRPGEVVPAA*
Ga0111539_1069802123300009094Populus RhizosphereMSRQAFGWIVVVTDPSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVTMLSQRAVTVQLRLRPGEVAQIT*
Ga0111539_1346297723300009094Populus RhizosphereCHAAFMSRQAFGWIVEVTDPSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVAMLSQRAVTVQLRLKPGEVAQIT*
Ga0105245_1263721313300009098Miscanthus RhizosphereMSEQAFGWVVAVTDPVGIRRYHVAVRNRVEAVSAVKRRVQGAALAHVEAVTMLSKRSVTVLLRLRPGEVAQIA*
Ga0111538_1018625633300009156Populus RhizosphereMSRQAFGWIVVVTDPSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVTMLSQRAVTVQLRLKPGEVAQIT*
Ga0111538_1062551333300009156Populus RhizosphereMSEQAFGWTVTVTDLSGIKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0111538_1100367633300009156Populus RhizosphereMSRQAFGWIVEVTDPSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVAMLSQRAVTVQLRLKPGEVAQIT*
Ga0075423_1091663033300009162Populus RhizosphereMSEQAFGWTVTVTGPSGVKQYHVAGRNRVEAVSAVRRRVVGAATANVEAVTMLSLRAVSFVLRLKPGEVVPVA*
Ga0105249_1308581923300009553Switchgrass RhizosphereMSEQAFGWTVTVTDPSGVKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0105347_103592713300009609SoilMSEQAFGWIVEVVGQSGTRRFHVAVRNRVEAANAVRRRVSGAKEARVEAVSMLSKRAVSVQLRLKPGEVAEIA*
Ga0126380_1010203033300010043Tropical Forest SoilMSDQAFGWIVEVTDRAGSRQYHVAIRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIR*
Ga0126380_1041159633300010043Tropical Forest SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEATDAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEITSFPD*
Ga0126384_1014783433300010046Tropical Forest SoilEARMSDQAFGWIVEVTNCAGSRKYHVAVRNRVEAADAVRRRVVGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0126384_1161653213300010046Tropical Forest SoilMSDQAFGWIVEVTDRAGSRQYHVAIRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0126382_1003813323300010047Tropical Forest SoilMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRQRVVGAALAHVEAVTMLSQRTVTVLLRLKPGEVAQVT*
Ga0126382_1062240923300010047Tropical Forest SoilMSDQAFGWIVEVTDRAGSRQYHVAMRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIPRFPD*
Ga0126382_1092421923300010047Tropical Forest SoilMFASLKIEDCREECHPPFMSGQAFGWIVEVTDHSGTKRYQVAVRNRVEAVSAVRRRIVGATQARVEAVTMLSQRAVTVLLRLKPGEVAQVK*
Ga0126373_1102009423300010048Tropical Forest SoilMSDQAFGWIVEVTDRAGSRQYHVAIRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIP*
Ga0126370_1180657823300010358Tropical Forest SoilWIVEVTDRAGSRQYHVAIRNRVEAADAVRRRVLGAATAHVEAETMLSKRAVTILLRLKPGEMAEIS*
Ga0126376_1004879853300010359Tropical Forest SoilMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAALAHVEAVTMLSRRTVSVSLRLKPGEVAQVT*
Ga0126376_1042130323300010359Tropical Forest SoilMSDQAFGWIVEVTDRAGSRKYHVAIRNRVEAANAVRRRVLGAATAHVEAVTMLSKRAFTVLLRLKPGEMAEIT*
Ga0126376_1142939323300010359Tropical Forest SoilMSDQAFGWIVEVTDRAGSRMYHVAVRNRVEAVDAVRRRVFGAPTAHVEAATMLSKRAVTVLLRLKPGEMAEITPD*
Ga0126372_1123462413300010360Tropical Forest SoilMSDQAFGWIVEVTDGAGSRKYHVAVRNRVEAADAVRRRVVGAGAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0126377_1133148513300010362Tropical Forest SoilQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRQRVVGAALAHVEAVTMLSRRTVTVLLRLKPGEVAQVT*
Ga0126379_1070187223300010366Tropical Forest SoilMSDQAFGWIVEVTNGAGSRKYHVAVRNRVEAADAVRRRVIGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0126379_1134410123300010366Tropical Forest SoilMSDQAFGWIVEVTDRAGSRKYHVAIRNRVEAANAVRRRVLGAATAHVEAVTVLSKRAVTVPLRLKPGVIRLTSSQLRLRR*
Ga0134125_1093041623300010371Terrestrial SoilVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNPSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0134126_1288875213300010396Terrestrial SoilAPREGWGRDRRPVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVI*
Ga0134122_1015097323300010400Terrestrial SoilMSRQAFGWIVEVTDHSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHIEAVTMLSQRAITVQLRLKPGEVAQIT*
Ga0134122_1024424643300010400Terrestrial SoilVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRDVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT*
Ga0134122_1118290123300010400Terrestrial SoilMSEQAFGWIVAVTDPAGGRRYHVAIKNRVEAVSAVKRRVQGAALAQVEAVSMLSKRAVTVLLRLKPGDVVQIT*
Ga0134123_1263843923300010403Terrestrial SoilMSEQAFGWTVTVTDPSGVKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSILLRLKPGDVVLIA*
Ga0134123_1269222313300010403Terrestrial SoilGRLPGVLLRVVDHGEGCHGRRMSDQAFGWTVAVTGPSGVKQYHVAVRNRVDAVSAVRRRVAGAATAHVEAVTMLSHRAVSVQLRLRPGEVVPAA*
Ga0124850_104258333300010863Tropical Forest SoilGWIVEVTDRAGCRKYHIAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0164300_1032461413300012951SoilMSEQAFGWTVAVTDPSGVKQYHVAVRNRVEAVSAVRRRVVGAATAQVEAVTMLSQRAVTILLRLKPGEVVPVT*
Ga0164300_1051041423300012951SoilMSEQAFGWTVTVTDPSGVRRYHVAIKNRLAAMNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0164303_1007006923300012957SoilMSRQAFGWIVEVTDHEGTRRYHVAVRNRVEAVSAVRRRVVGAALAHVEAVTMLSQRAVTVLLRLKPGEVSQMN*
Ga0164303_1015827723300012957SoilLTKVAEAAQLGCMSEQAFGWTVTVTDPTGVKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA*
Ga0164303_1079899323300012957SoilMSEQAFGWTVAVTDPSGVKQYHVAVRNRVEAVSAVRRRVVGAATAQVEAVTMLSQRAVTILLRLKPGEVVPVR*
Ga0126369_1149747123300012971Tropical Forest SoilSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0157374_1077459233300013296Miscanthus RhizosphereMSQQAFGWVVAVTDRSGSRRYHVAVRNRMEAVNSVRRRVAGAATAHIEAVSMLSQRAVTV
Ga0157380_1130950423300014326Switchgrass RhizosphereMSEQAFGWTVTVTDPSGVKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLHRLKPGDVVLIA*
Ga0157379_1259027313300014968Switchgrass RhizosphereMSEQAFGWTVTVTDPSGVKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIALRSGR
Ga0157376_1071859313300014969Miscanthus RhizosphereLAGVVRVEDRREQCHAAFRSGQAFGWIVEVTDHSGTRRYHVAVRNRVEAVSAVRRRVVGAALAQVQAVTMLSQRTVAVLLRLKPGEVAQVT*
Ga0180093_102063523300015258SoilMSEQAFGWIVEVVSQSGTKRYHVAVRNRVEAANAVRRRVSGAKEARVEAVSMLSKRAVSIQLRLKPGEVAEIA*
Ga0132258_1022129433300015371Arabidopsis RhizosphereVSDQAFGWIVEVTDRAGSRKYHVAVRNRSEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT*
Ga0132258_1026969583300015371Arabidopsis RhizosphereFLAGVVRVEGRSEQCHAAFMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAALAHVEAVTMLSQRTVTVLLRLKPGEVAQVT*
Ga0132258_1119709423300015371Arabidopsis RhizosphereMSEQAFGWIVAVIDRTGTRRYHVAVRNRVEAVSAVRRRVSGAGSARVEAESMLSKRAVTVQLRLKPGEVAQIT*
Ga0182036_1122342613300016270SoilMSNQAFGWIVEVTDREGSRKYHVAIRNRVEAANAVRRRVLGAATAHVEAETMLSKRAVTVLLRLKPGELAEIT
Ga0182041_1083700023300016294SoilMSDQAFGWIVEVTNCEGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0182033_1013328313300016319SoilMSDQAFGWIVEVTDRAGFRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0182040_1045081513300016387SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRMKPGEMAE
Ga0182039_1057797723300016422SoilMSNQAFGWIVEVNDRVGSREYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0187783_1135978713300017970Tropical PeatlandMSDQAFGWIVEVTDRAGSRQYHVAIRNRVEAADAVRRRVLGAAAAHVVAVTMLSKRAVTVLLRLKPGEMAEIT
Ga0187782_1143268013300017975Tropical PeatlandVTDRAGSRQYHVAIRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT
Ga0187823_1004663823300017993Freshwater SedimentMSEQAFGWIVEVADDAGTRRYHVAVRNRVEAVDAVRRRVAGAEGARVEAVSMLSKRVVSVVLRLKPGEVAEIT
Ga0184627_1046689123300018079Groundwater SedimentMSKQAFGWIVEVIDRSGSKRYHVAIRNRIQAVNAVRRRVAGAAGANIEAVSMLSKRAVTILLRLKPGDVAQIT
Ga0190270_1120417523300018469SoilMSEQAFGWIVEVVSQSGTKRYHVAVRNRVEAANAVRRRVSGAKEARVEAVSMLSKRAVSIQLRLKPGEVAEIA
Ga0190270_1200059823300018469SoilMSEQAFGWTVAVTGPAGVKQYHVAVRNRVEAVSAVKRRVVGAAKAHVEAVTMLSHRAVTVQLRLKPGEVVPVT
Ga0190274_1177257323300018476SoilMSDQAFGWTVAVTDPSGIKQYHVAVRNRVEAVSAVKRRVAGASTAHVEAVTMLSQRSVSVLLRLKPGDVVPAT
Ga0173482_1008808023300019361SoilMSDQAFGWTVAVTGPSGVKQYHVAVRNRVDAVSAVRRRVAGAATAHVEAVTMLSHRAVSVQLRLKPGEVVPAA
Ga0187846_1006242623300021476BiofilmMSDQAFGWIVEVTNCEGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEVVTMLSQRAVTVLLRLKPGELAEIT
Ga0210402_1188731313300021478SoilVSGRSEARMSDQAFGWIVKVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT
Ga0126371_1015445943300021560Tropical Forest SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVRLRLKPGEMAEIT
Ga0207653_1015676613300025885Corn, Switchgrass And Miscanthus RhizosphereVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT
Ga0207687_1108638023300025927Miscanthus RhizosphereMSQQAFGWVVAVTDRSGSRRYHVAVRNRMEAVNSVRRRVAGAATAHIEAVSMLSQRAVTVLLRL
Ga0207669_1054313323300025937Miscanthus RhizosphereIGFRSGSVSARLRVVGHREGCHGPCMSEQAFGWTVTVTDPSGVRRYHVAIKNRLAAMNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA
Ga0207704_1077579713300025938Miscanthus RhizosphereAPREGWGRDRRPVKITLVVRVEGRREQCHVAFMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT
Ga0207668_1026333823300025972Switchgrass RhizosphereMSEQAFGWTVAVTDPSGVKQYHVAVRNRVEAVSAVRRRVVGAATAHVEAVTMLSQRAVTILLRLKPGEVVPVT
Ga0207668_1072910613300025972Switchgrass RhizosphereMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVT
Ga0207708_1064415123300026075Corn, Switchgrass And Miscanthus RhizosphereMSEQAFGWVIAVTDPAEVRRYHVAIKNRVEAVSAVRRRVQGAALAHVEAVTMLSKRTVTVLLRLKPGEVVQIA
Ga0207708_1202063213300026075Corn, Switchgrass And Miscanthus RhizosphereMSEQAFGWTVTVTDPSGVKRYHVAIKNRLAAVNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA
Ga0207641_1164163013300026088Switchgrass RhizosphereMSEQAFGWIVAVTDPSGVKQYHVAVRNRVEAVSAVKRRVAGAAAAHVEAVSMLSQRAVTILLRLKPGEVVLVS
Ga0207761_112077513300027516Tropical Forest SoilMSNQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0209466_104424323300027646Tropical Forest SoilTIANKASLAGVVRVEGRREQCHATFMSGQAFGWIVEVSDHTGTKRYHVAVRNRVEAVSAVRRRVVGAALARVEAVTMLSQRAVTVLLRLKPGEVAQVK
Ga0207826_115078713300027680Tropical Forest SoilMSNQAFGWIVEVTDREGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0207862_107224313300027703Tropical Forest SoilMSNQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0209177_1009384313300027775Agricultural SoilMSGQAFGWIVEVSDHSGTKRYHVAVRNRVEAVNAVRRRVVGAALAHVEAVTMLSQRTATVLLRLKPGEVAQVT
Ga0209726_1014116313300027815GroundwaterMSEQAFGWIVEVVDRSGTRRYHVAVRNRVEAVNAVRRRVSGAAGAHIEAVTMLSQRAVTVQLRLRPGEVAQIT
Ga0207428_1052692633300027907Populus RhizosphereMCAVPVVEGCRGQCHPPLMSRQAFGWIVVVTDPSGTKRYHVAVRNRVEAVNAVRRRVVGAAQAHVEAVTMLSQRAVTVQLRLRPGEVAQIT
Ga0209382_1028041113300027909Populus RhizosphereLTTQAFGWIVAVTNPSGITRYHVAVRNRDDAVSAVRRRVIGAAAAQVEAVTMLSQGTVNKLLRLKPGEVAPIA
Ga0209382_1173751113300027909Populus RhizosphereMTEQAFGWIVMVTGPSGAKRYHVAIRNRVEAENAVRRRVAGAAIAHVEAVTMLSQRAVSVQLRLKPGDVVLIT
Ga0268264_1140971333300028381Switchgrass RhizosphereMSEQAFGWVIAVTDPAEVRRYHVAIKNRVEAVSAVRRRVQGAALAHVEAVTMLSKRTVT
Ga0247826_1004319533300030336SoilMSEQAFGWIVEVVSQSGTKRYHVAVRNRFEAANAVRRRVSGAKEARVEAVSMLSKRAVSIQLRLKPGEVAEIA
Ga0307499_1004087413300031184SoilLKISFLAGVVRVEGRREQCHAAVMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVI
Ga0318528_1062999323300031561SoilMSDQAFGWIVEVTDRAGSRKYHVAIRNRVEAADAVRRRVLGAAAAHVEVVTMLSKRAVTVLLRLKPGELAEIT
Ga0318515_1032209423300031572SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0310915_1087982813300031573SoilRRGEARMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGEMAEIT
Ga0318542_1067084723300031668SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVRLRLKPGEMAEIT
Ga0306917_1096092323300031719SoilMSDQAFGWIVEVTDRAGSRKYHVAIRNRLEAADAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT
Ga0307469_1104388823300031720Hardwood Forest SoilMSGQAFGWIVEVTNHSGTRRYHVAVRNRVEAVNAVRRRIVGADLAHVEAVTLLSQRAVTVLLRLKPGEVAQVT
Ga0318500_1020788923300031724SoilMSDQAFGWIVEVTDRAGSRKYHVAIRNRVEAANAVRRRVLGAATAHVEAVTMLSKRAVTVLLRPKPGEMAEIT
Ga0307468_10047672123300031740Hardwood Forest SoilLAGIVRVEGRHEQCHAAVMSGQAFGWIVEVRNHSGTRRYHVAVRNRVEAVNAVRRRIVGADLAHVEAVTLLSQRAVTVLLRLKPGEVAQVT
Ga0306918_1002457313300031744SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVRLRLK
Ga0318521_1042904713300031770SoilSDQAFGWIVEVTDRAGSRKYHVAIRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0318550_1044339923300031797SoilMSDQAFGWIVEVTDRAGSRKYHVAIRNRVEAANAVRRRVLGAATAHVEAVTMLSKRAVTVLLRLKPGEMAEIT
Ga0310900_1147959523300031908SoilLAGVVRVEDRREQCHAAFMSGQAFGWIVEVTDHSGTRRYHVAVRNRVEAVSAVRRRVVGAALAQVQAVTMLSQRTVAVLLRLKPGEVAQVT
Ga0306923_1028986953300031910SoilMSDQAFGWIVEVTDRAGSRKYHVAIRNRVEAANAVRRRVLGAATAHVEAVTMLSKRAVTVLLRPK
Ga0310912_1148472013300031941SoilMSDQAFGWIVEVTNCEGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEVVTMLSKRAVTVLLRLKPGEMAEIT
Ga0306926_1064949933300031954SoilSSVVGRGEARMSNQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEAVTMLSKRAVTVLLRLKPGELAEIT
Ga0306922_1151350613300032001SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVRLR
Ga0310897_1025720523300032003SoilLAGVVRVEDRREQCHAAFMSGQAFGWIVEVTDHSGTRRYHVAVRNRVEAVSAVRRRVVGAALAQVQAVTMLSQRTVAVLLRL
Ga0318507_1025735213300032025SoilMSDQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAAAGRVEAVTMLSKRAVTVLLRLK
Ga0318533_1126293213300032059SoilMSNQAFGWIVEVTDREGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEVVTMLSKRAVTVLLRLKPGELAEIT
Ga0318553_1042190623300032068SoilMSNQAFGWIVEVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAAAAHVEVVTMLSQRAVTVLLRLKPGELAEIT
Ga0318540_1045245813300032094SoilVTDRAGSRKYHVAVRNRVEAADAVRRRVLGAATAHVEAVTMLSKRAVTVRLRLKPGEMAEIT
Ga0307470_1009294633300032174Hardwood Forest SoilVKITLGVRVEGRREQCHVALMSGQAFGWIVEVSNHSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTLLSQRAVTVLLRLRPGEVAQVT
Ga0307470_1045059923300032174Hardwood Forest SoilMSGQAFGWIVEVSNPSGTKRYHVAVRNRVEAVNAVRRRVVGADLAHVEAVTMLSQRAVTVLLRLKPGEVAQVI
Ga0307470_1151446213300032174Hardwood Forest SoilMSEQAFGWTVTVTDPSGVRRYHVAIKNRLAAMNAVRRRVAGAAIAHVEAGTMLSQRAVSVLLRLKPGDVVLIA
Ga0364923_0013873_1518_17393300034690SedimentMSEQAFGWIVEVTGTDGTKRYHVAVRNRVEAANAVRRRVAGAKEARVEAVSMLSKRAVSIQLRLKPGEVAEIA
Ga0364936_102776_83_3073300034773SedimentMSEQAFGWIVAVTDPSSGVKRYHVAVRNRADAVSAVKRRVAGAAAAQVEAVSMLSQRDVSIQLRLKPGEVVAIT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.