Metagenome / Metatranscriptome Family F033135

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033135
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	49 residues
Representative Sequence	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRSNNDGGRFPRAKTHV
Number of Associated Samples	109
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.53 %
% of genes near scaffold ends (potentially truncated)	15.73 %
% of genes from short scaffolds (< 2000 bps)	48.88 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.831 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.787 % of family members)
Environment Ontology (ENVO)	Unclassified (38.764 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.596 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.99% β-sheet: 0.00% Coil/Unstructured: 87.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF00733	Asn_synthase	38.20
PF13537	GATase_7	10.67
PF13505	OMP_b-brl	3.93
PF05402	PqqD	2.81
PF00005	ABC_tran	2.25
PF01061	ABC2_membrane	2.25
PF01041	DegT_DnrJ_EryC1	1.69
PF07475	Hpr_kinase_C	1.69
PF13471	Transglut_core3	1.69
PF00535	Glycos_transf_2	1.12
PF06739	SBBP	1.12
PF07589	PEP-CTERM	1.12
PF00132	Hexapep	0.56
PF02899	Phage_int_SAM_1	0.56
PF04366	Ysc84	0.56
PF08241	Methyltransf_11	0.56
PF12704	MacB_PCD	0.56
PF02683	DsbD	0.56
PF13620	CarboxypepD_reg	0.56
PF01242	PTPS	0.56
PF06508	QueC	0.56
PF03795	YCII	0.56
PF13432	TPR_16	0.56
PF14572	Pribosyl_synth	0.56
PF06210	DUF1003	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.69
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.69
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.69
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.69
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.69
COG1493	Serine kinase of the HPr protein, regulates carbohydrate metabolism	Signal transduction mechanisms [T]	1.69
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	1.69
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.56
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.56
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.56
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.56
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.56
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.56
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.56
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	0.56
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.56
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.56
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.56
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.56
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.56
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.56
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.83 %
Unclassified	root	N/A	15.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.83 %
Unclassified	root	N/A	15.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.83 %
Unclassified	root	N/A	15.17 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	19.10 %
Unclassified	root	N/A	15.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.06 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	19.10 %
Unclassified	root	N/A	15.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	19.10 %
Unclassified	root	N/A	15.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.17 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	3.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.17 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	3.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.17 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	1.12 %
Cyanothecaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.17 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	1.12 %
Cyanothece	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.17 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	1.12 %
unclassified Cyanothece	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece → unclassified Cyanothece	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.17 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	1.12 %
Cyanothece sp. PCC 7425	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece → unclassified Cyanothece → Cyanothece sp. PCC 7425	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1000260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece → unclassified Cyanothece → Cyanothece sp. PCC 7425	7526	Open in IMG/M
3300001124\|JGI12692J13336_1006066	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300001131\|JGI12631J13338_1007537	Not Available	1700	Open in IMG/M
3300001471\|JGI12712J15308_10000134	All Organisms → cellular organisms → Bacteria → Acidobacteria	20997	Open in IMG/M
3300001471\|JGI12712J15308_10014877	All Organisms → cellular organisms → Bacteria	2071	Open in IMG/M
3300001471\|JGI12712J15308_10124944	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300001593\|JGI12635J15846_10144492	Not Available	1640	Open in IMG/M
3300001593\|JGI12635J15846_10153013	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300002245\|JGIcombinedJ26739_100310121	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300002245\|JGIcombinedJ26739_100315164	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300002245\|JGIcombinedJ26739_100409104	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300002245\|JGIcombinedJ26739_100733826	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300003505\|JGIcombinedJ51221_10022870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2211	Open in IMG/M
3300004082\|Ga0062384_100013932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3207	Open in IMG/M
3300004082\|Ga0062384_100021155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2765	Open in IMG/M
3300004082\|Ga0062384_100051501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1996	Open in IMG/M
3300004082\|Ga0062384_100119321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1445	Open in IMG/M
3300004082\|Ga0062384_100384772	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300004091\|Ga0062387_100212112	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300004091\|Ga0062387_100638777	Not Available	769	Open in IMG/M
3300004092\|Ga0062389_100161851	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300004092\|Ga0062389_100174704	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300004092\|Ga0062389_101717357	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300004092\|Ga0062389_102099403	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300004092\|Ga0062389_103319596	Not Available	603	Open in IMG/M
3300004631\|Ga0058899_10019545	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300004631\|Ga0058899_10026437	Not Available	541	Open in IMG/M
3300004635\|Ga0062388_100015987	All Organisms → cellular organisms → Bacteria	4204	Open in IMG/M
3300004635\|Ga0062388_100091669	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300004635\|Ga0062388_100630305	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300004635\|Ga0062388_101397622	Not Available	703	Open in IMG/M
3300005538\|Ga0070731_10824807	Not Available	615	Open in IMG/M
3300005541\|Ga0070733_10006335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	7739	Open in IMG/M
3300005541\|Ga0070733_10252500	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300005541\|Ga0070733_11227839	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005591\|Ga0070761_10002801	All Organisms → cellular organisms → Bacteria	10615	Open in IMG/M
3300005602\|Ga0070762_10036917	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300005602\|Ga0070762_10123564	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300005610\|Ga0070763_10024535	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300005610\|Ga0070763_10248662	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005712\|Ga0070764_10000490	All Organisms → cellular organisms → Bacteria → Acidobacteria	15516	Open in IMG/M
3300005712\|Ga0070764_10308970	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005921\|Ga0070766_10742476	Not Available	666	Open in IMG/M
3300005950\|Ga0066787_10000639	All Organisms → cellular organisms → Bacteria	4527	Open in IMG/M
3300005952\|Ga0080026_10004176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	3373	Open in IMG/M
3300006176\|Ga0070765_100002069	All Organisms → cellular organisms → Bacteria	12463	Open in IMG/M
3300006176\|Ga0070765_100261321	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300006893\|Ga0073928_10002478	All Organisms → cellular organisms → Bacteria	31587	Open in IMG/M
3300006893\|Ga0073928_10003493	All Organisms → cellular organisms → Bacteria	24712	Open in IMG/M
3300006893\|Ga0073928_10016318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	7993	Open in IMG/M
3300009623\|Ga0116133_1023232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	1533	Open in IMG/M
3300009628\|Ga0116125_1005887	All Organisms → cellular organisms → Bacteria	3536	Open in IMG/M
3300010379\|Ga0136449_100347659	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300010379\|Ga0136449_103905016	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300011120\|Ga0150983_12503574	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300011120\|Ga0150983_13532792	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300011269\|Ga0137392_10308054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1310	Open in IMG/M
3300012096\|Ga0137389_10271906	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300012189\|Ga0137388_10105742	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300012202\|Ga0137363_10126531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1979	Open in IMG/M
3300014201\|Ga0181537_10105895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1916	Open in IMG/M
3300014495\|Ga0182015_10000704	All Organisms → cellular organisms → Bacteria	47163	Open in IMG/M
3300017822\|Ga0187802_10002202	All Organisms → cellular organisms → Bacteria → Acidobacteria	5470	Open in IMG/M
3300017822\|Ga0187802_10110912	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300017822\|Ga0187802_10347443	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300017924\|Ga0187820_1100792	Not Available	831	Open in IMG/M
3300017932\|Ga0187814_10450983	Not Available	504	Open in IMG/M
3300017933\|Ga0187801_10012051	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300017939\|Ga0187775_10031964	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300017942\|Ga0187808_10434895	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300017946\|Ga0187879_10017312	All Organisms → cellular organisms → Bacteria	4481	Open in IMG/M
3300017955\|Ga0187817_10043221	All Organisms → cellular organisms → Bacteria	2761	Open in IMG/M
3300017961\|Ga0187778_10013070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	5139	Open in IMG/M
3300017970\|Ga0187783_10872755	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300017972\|Ga0187781_10000105	All Organisms → cellular organisms → Bacteria	55564	Open in IMG/M
3300017972\|Ga0187781_10000132	All Organisms → cellular organisms → Bacteria → Acidobacteria	49713	Open in IMG/M
3300017995\|Ga0187816_10019845	All Organisms → cellular organisms → Bacteria	2628	Open in IMG/M
3300018033\|Ga0187867_10072259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2036	Open in IMG/M
3300018034\|Ga0187863_10014144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	5040	Open in IMG/M
3300018047\|Ga0187859_10069865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1849	Open in IMG/M
3300020579\|Ga0210407_10000058	All Organisms → cellular organisms → Bacteria	145202	Open in IMG/M
3300020579\|Ga0210407_10000863	All Organisms → cellular organisms → Bacteria	31053	Open in IMG/M
3300020579\|Ga0210407_10080268	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300020579\|Ga0210407_10173878	Not Available	1667	Open in IMG/M
3300020579\|Ga0210407_10213416	Not Available	1501	Open in IMG/M
3300020581\|Ga0210399_10062199	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300020581\|Ga0210399_10081734	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300020581\|Ga0210399_10498168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1013	Open in IMG/M
3300020582\|Ga0210395_10092186	All Organisms → cellular organisms → Bacteria	2236	Open in IMG/M
3300020583\|Ga0210401_10011982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8449	Open in IMG/M
3300020583\|Ga0210401_10052211	All Organisms → cellular organisms → Bacteria	3858	Open in IMG/M
3300020583\|Ga0210401_10056082	All Organisms → cellular organisms → Bacteria	3715	Open in IMG/M
3300021168\|Ga0210406_10017253	All Organisms → cellular organisms → Bacteria	6818	Open in IMG/M
3300021171\|Ga0210405_10154172	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300021180\|Ga0210396_10249031	Not Available	1580	Open in IMG/M
3300021181\|Ga0210388_10049113	All Organisms → cellular organisms → Bacteria	3513	Open in IMG/M
3300021181\|Ga0210388_10083866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2708	Open in IMG/M
3300021181\|Ga0210388_10110508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2361	Open in IMG/M
3300021401\|Ga0210393_10036141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	3869	Open in IMG/M
3300021402\|Ga0210385_10315586	Not Available	1161	Open in IMG/M
3300021403\|Ga0210397_10030729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3350	Open in IMG/M
3300021404\|Ga0210389_10043921	All Organisms → cellular organisms → Bacteria	3430	Open in IMG/M
3300021404\|Ga0210389_10084706	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300021404\|Ga0210389_10766199	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300021405\|Ga0210387_10000734	All Organisms → cellular organisms → Bacteria	24058	Open in IMG/M
3300021405\|Ga0210387_10007138	All Organisms → cellular organisms → Bacteria	8558	Open in IMG/M
3300021405\|Ga0210387_10017976	All Organisms → cellular organisms → Bacteria	5488	Open in IMG/M
3300021420\|Ga0210394_10000456	All Organisms → cellular organisms → Bacteria	87035	Open in IMG/M
3300021420\|Ga0210394_10002888	All Organisms → cellular organisms → Bacteria	22722	Open in IMG/M
3300021420\|Ga0210394_10003564	All Organisms → cellular organisms → Bacteria	19295	Open in IMG/M
3300021432\|Ga0210384_10000367	All Organisms → cellular organisms → Bacteria → Acidobacteria	69394	Open in IMG/M
3300021433\|Ga0210391_10004747	All Organisms → cellular organisms → Bacteria	11255	Open in IMG/M
3300021474\|Ga0210390_10001967	All Organisms → cellular organisms → Bacteria	18794	Open in IMG/M
3300021479\|Ga0210410_11574341	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300021559\|Ga0210409_10152561	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300022557\|Ga0212123_10009433	All Organisms → cellular organisms → Bacteria	14276	Open in IMG/M
3300022724\|Ga0242665_10079058	Not Available	937	Open in IMG/M
3300022726\|Ga0242654_10400749	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300024227\|Ga0228598_1091561	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300024271\|Ga0224564_1038731	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300026217\|Ga0209871_1045818	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300027370\|Ga0209010_1000238	All Organisms → cellular organisms → Bacteria	19680	Open in IMG/M
3300027432\|Ga0209421_1033256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1011	Open in IMG/M
3300027432\|Ga0209421_1112170	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300027575\|Ga0209525_1005080	All Organisms → cellular organisms → Bacteria → Acidobacteria	3027	Open in IMG/M
3300027652\|Ga0209007_1145771	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300027767\|Ga0209655_10006187	All Organisms → cellular organisms → Bacteria	4104	Open in IMG/M
3300027767\|Ga0209655_10010576	All Organisms → cellular organisms → Bacteria	3125	Open in IMG/M
3300027767\|Ga0209655_10040906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1553	Open in IMG/M
3300027767\|Ga0209655_10044939	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300027767\|Ga0209655_10096748	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300027853\|Ga0209274_10026923	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300027855\|Ga0209693_10201747	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300027867\|Ga0209167_10005585	All Organisms → cellular organisms → Bacteria	6211	Open in IMG/M
3300027879\|Ga0209169_10458084	Not Available	670	Open in IMG/M
3300027884\|Ga0209275_10432663	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300027889\|Ga0209380_10209776	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300027889\|Ga0209380_10209844	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300027889\|Ga0209380_10346551	Not Available	872	Open in IMG/M
3300027908\|Ga0209006_10000034	All Organisms → cellular organisms → Bacteria	130955	Open in IMG/M
3300027908\|Ga0209006_10005086	All Organisms → cellular organisms → Bacteria	11935	Open in IMG/M
3300028773\|Ga0302234_10162006	Not Available	973	Open in IMG/M
3300029882\|Ga0311368_10743804	Not Available	673	Open in IMG/M
3300029910\|Ga0311369_10047547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	4714	Open in IMG/M
3300029944\|Ga0311352_10187762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1769	Open in IMG/M
3300029999\|Ga0311339_10185160	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300030053\|Ga0302177_10138505	Not Available	1380	Open in IMG/M
3300030618\|Ga0311354_10487242	Not Available	1222	Open in IMG/M
3300030677\|Ga0302317_10047420	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300031057\|Ga0170834_103900707	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300031128\|Ga0170823_11253225	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031525\|Ga0302326_11466641	Not Available	917	Open in IMG/M
3300031708\|Ga0310686_106583379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2290	Open in IMG/M
3300031708\|Ga0310686_106595214	Not Available	1678	Open in IMG/M
3300031708\|Ga0310686_108770196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1567	Open in IMG/M
3300031708\|Ga0310686_115088393	All Organisms → cellular organisms → Bacteria	3272	Open in IMG/M
3300031708\|Ga0310686_116231064	Not Available	1360	Open in IMG/M
3300031708\|Ga0310686_117987020	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300031708\|Ga0310686_119312573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4351	Open in IMG/M
3300031715\|Ga0307476_10005402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	7725	Open in IMG/M
3300031715\|Ga0307476_10203073	Not Available	1439	Open in IMG/M
3300031718\|Ga0307474_10000499	All Organisms → cellular organisms → Bacteria	28022	Open in IMG/M
3300031718\|Ga0307474_10169027	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300031720\|Ga0307469_10215103	Not Available	1514	Open in IMG/M
3300031754\|Ga0307475_10006794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	7333	Open in IMG/M
3300031754\|Ga0307475_10067242	All Organisms → cellular organisms → Bacteria → Acidobacteria	2731	Open in IMG/M
3300031820\|Ga0307473_10003682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4668	Open in IMG/M
3300031962\|Ga0307479_10065836	All Organisms → cellular organisms → Bacteria	3495	Open in IMG/M
3300032180\|Ga0307471_100008629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6682	Open in IMG/M
3300032180\|Ga0307471_100054546	All Organisms → cellular organisms → Bacteria	3326	Open in IMG/M
3300032180\|Ga0307471_100100160	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300032205\|Ga0307472_100019299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3691	Open in IMG/M
3300032205\|Ga0307472_101617041	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300032515\|Ga0348332_10855409	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300032895\|Ga0335074_10000004	All Organisms → cellular organisms → Bacteria	658676	Open in IMG/M
3300032898\|Ga0335072_10550797	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300033134\|Ga0335073_10057173	All Organisms → cellular organisms → Bacteria → Acidobacteria	5183	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.44%
Host-Associated	Host-Associated	0.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.84%
Aquatic	Environmental → Aquatic	23.60%
Plants	Host-Associated → Plants	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.22%
Freshwater	Environmental → Aquatic → Freshwater	21.35%
Peat	Environmental → Terrestrial → Peat	5.06%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.25%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.45%
Loam	Environmental → Terrestrial → Soil → Loam	23.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.06%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.25%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.49%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.25%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.25%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.12%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.06%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.25%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.12%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.12%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.56%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.56%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001124	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10002605	3300001084	Forest Soil	MPKPVKRDNKKPYSSPIITVYGTVRELTQKIGIHGNSDGGRIPRARTHI*
JGI12692J13336_10060661	3300001124	Forest Soil	MLKPVKRDLKKPYSSPKLTTYGTVQQLTQKVGLRKSSDGGRFPRYKTHM*
JGI12631J13338_10075372	3300001131	Forest Soil	MLKPVKRDFKKPYSSPKLTTYGTVQQLTQAVGLRRSPDGGRFPRYKTHM*
JGI12712J15308_100001346	3300001471	Forest Soil	MLKPAKRDPKKSYSSPILTTYGTVKQLTQKVGLRKTPDGGSRLKIKTHM*
JGI12712J15308_100148772	3300001471	Forest Soil	MLKPVKRDNKKPYSPPIITVYGTVQELTQQVGVSHTNDGGSTPRIKTHV*
JGI12712J15308_101249442	3300001471	Forest Soil	MLKPVKRDXKKPYSSPKLTNYGTVQQLTQKVGLRKXSDGGRFPRYKTHM*
JGI12635J15846_101444923	3300001593	Forest Soil	MLKPVKRDSKKVYSSPKLTTYGTVQHLTQKKGLRNNTDGGRFPRYKTHI*
JGI12635J15846_101530132	3300001593	Forest Soil	MLKPVKRDLKKPYSCPRLTNYGTVQQLTQKVGLRKSSDGGRFPRYKTHM*
JGIcombinedJ26739_1003101212	3300002245	Forest Soil	MLKPVKRDFKKPYSSPKLTTYGNVQQLTQKVGLRKSSDGGRFPRYKTHM*
JGIcombinedJ26739_1003151642	3300002245	Forest Soil	MLKPVKRDLKKPYSSPKLTNYGTVQQLTQKVGLRKXSDGGRFPRYKTHM*
JGIcombinedJ26739_1004091042	3300002245	Forest Soil	MLKSVKRDSKKPYSSPKLTTYGTVQQLTQKKGLRQNADGGRFPRFKTHI*
JGIcombinedJ26739_1007338262	3300002245	Forest Soil	MLKPAQRDPKKPYTSPKLSVYGTVKVLTRNVGLRHTRDGGGLPRIKTAT*
JGIcombinedJ51221_100228702	3300003505	Forest Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKVSIRSNNDGGHFPRVKTHA*
Ga0062384_1000139324	3300004082	Bog Forest Soil	MLKPVKKGSKKPYLSPLLTVYGTVQQLTQKTGLRRSPDGGRFPRTKTHL*
Ga0062384_1000211552	3300004082	Bog Forest Soil	MAKPVQRDPKKPYSSPLLTIYGTVQDLTQKVALVRHTDGGKFPRLRTSAT*
Ga0062384_1000515013	3300004082	Bog Forest Soil	MLKPVKRDSKKPYSSPKLTIYGTVRHLTQKMGLRQNGDGGRFPRYKTHM*
Ga0062384_1001193211	3300004082	Bog Forest Soil	MLKPVKRDNKKPYSSPILTVHGTVQELTQKIGTRRTPDSVRRPTTYTHT*
Ga0062384_1003847722	3300004082	Bog Forest Soil	MPNAVKHDNKKPYSSPVITVYGTVQVLTQTIGLRGTKDGGRFPTGRTHA*
Ga0062387_1002121122	3300004091	Bog Forest Soil	MPKPVKREIKKPYSSPLITVYGTVRELTQKVGIRGTTDHGRFPRFATHV
Ga0062387_1006387772	3300004091	Bog Forest Soil	MANPTSGDAKKPYSSPILTVYGTVRVLTQTQGTHGNPDGSIPPRAGTHI*
Ga0062389_1001618513	3300004092	Bog Forest Soil	GNPVKRMPKKPYSVPVLTVYGTVQELTQKMGLRKNRDGGRAPRVRTSL*
Ga0062389_1001747041	3300004092	Bog Forest Soil	GNPVKRMPKKPYSVPVLTVYGTVQELTQKVGLRKNRDNGRAPRVRTSL*
Ga0062389_1017173572	3300004092	Bog Forest Soil	MRKFIERGAKKPYSSPILTVYGTVRELTQKVALRRTRDGGRFPRVRTSLT*
Ga0062389_1020994032	3300004092	Bog Forest Soil	MHKPVKRDSKKVYSSPKLTAYGTVQQLTQNKGLRQQPDGGRFPRYKTHI*
Ga0062389_1033195961	3300004092	Bog Forest Soil	AMLKPVKRDNKKPYSSPIITIYGTVQELTQKVSLRSNNDGGHFPRVKTHA*
Ga0058899_100195452	3300004631	Forest Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKKGLRSNNDGGRFPRAKTHV*
Ga0058899_100264372	3300004631	Forest Soil	MLKPVKRDHKKPYSSPIMTVYGTVQELTQKVGLRGNKDGGRGLTSKTHV*
Ga0062388_1000159875	3300004635	Bog Forest Soil	MPKPDLRVPKKAYSSPILTTYGTVQELTQKVGLRKSNDGGKYPMIKTQM*
Ga0062388_1000916691	3300004635	Bog Forest Soil	MGNPVKRMPKKPYSVPVLTVYGTVQELTQKVGLRKNRDNGRAPRVRTSL*
Ga0062388_1006303052	3300004635	Bog Forest Soil	MPKPVKREIKKPYSSPLITVYGTVRELTQKVGIRGTTDHGRFPRFATHV*
Ga0062388_1013976222	3300004635	Bog Forest Soil	MLKPVKREIKKPYSSPLITVYGTVRELTQKVGPRGTTDHGRFPRFATHV*
Ga0070731_108248072	3300005538	Surface Soil	MLKPVKRDSKKPYSAPKLCVYGRVQELTRKNGLRKTSDGGHFPKLKTHI*
Ga0070733_100063353	3300005541	Surface Soil	MLKPVKRDKKKPYSSPIITVYGTVRELTQKVGILHKNDGGHFPRVKTHA*
Ga0070733_102525002	3300005541	Surface Soil	MLKPVKRDLKKPYSSPKLTNYGTVQQLTQKVGLRKSSDGGRFPRYKTHM*
Ga0070733_112278391	3300005541	Surface Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQRVGLRSKNDGGHFPRVKTHA*
Ga0070761_100028019	3300005591	Soil	MLKPVKRDHKKPYSSPIITVYGTVRELTQKVGLRSRTDGGRFPRSKTHV*
Ga0070762_100369172	3300005602	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGIRSNGDGGRFPRAKTHV*
Ga0070762_101235642	3300005602	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKVSLRSNNDGGHFPRVKTHA*
Ga0070763_100245352	3300005610	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRSRTDGGRFPRSKTHV*
Ga0070763_102486622	3300005610	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGLRSTTDGGRFPRSKTHV*
Ga0070764_100004906	3300005712	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGLRSNGDGGRFPRAKTHV*
Ga0070764_103089701	3300005712	Soil	MLKPVKRDFKKPYSSPKLTTYGTVQQLTQKVGLRKSSDGGRFPRYKTHM*
Ga0070766_107424762	3300005921	Soil	MRESTERGPKKPYSSPVLTVYGTVQELTQKVGLVRHTDGGRFPRVRTSIR*
Ga0066787_100006392	3300005950	Soil	MLKPVKRDSKKPYSSPTLTIYGTVQQLTQKVGLRKTPDGGTRLRIKTHL*
Ga0080026_100041764	3300005952	Permafrost Soil	MLKPVKRDSKKPYSSPTLTIYGTVQQLTKKVGLRKTPDGGTRLRIKTHL*
Ga0070765_1000020693	3300006176	Soil	MRKPVKLNNKKPYSPPLITVYGTVQELTQMKGKKGTSDGGSFPRFATHV*
Ga0070765_1002613212	3300006176	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKKGLRSNNDGGRFPRAKTHV*
Ga0073928_1000247812	3300006893	Iron-Sulfur Acid Spring	MGNPVKRAPKKPYSAPALTIYGTVQELTQKVGLRKNRDGGRAPRVRTSL*
Ga0073928_100034933	3300006893	Iron-Sulfur Acid Spring	MGNPVKRAPKKPYSAPALTIYGTVQELTQKVGLRKNRDGGRAPRVRTAL*
Ga0073928_100163188	3300006893	Iron-Sulfur Acid Spring	MLKPAIREPKKPYSSPILTIYGTVRELTQKVGLRKSNDGGRFPKIKTGM*
Ga0116133_10232322	3300009623	Peatland	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGIQGHSDGGRFPRAKTHV*
Ga0116125_10058872	3300009628	Peatland	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRSNNDGGRFPRAKTHV*
Ga0136449_1003476593	3300010379	Peatlands Soil	MRKAVERDTKKPYSSPTLTVYGTVRELTQKVGLVRTRDGGRFPRVRTSIR*
Ga0136449_1039050161	3300010379	Peatlands Soil	MLKPVKRDTKKPYSSPIITVYGTVQELTQKVGIHRKSDGGR
Ga0150983_125035742	3300011120	Forest Soil	MDKPVKRGPKKPYSTPILTVYGTIRELTLAVGIRRNRDGGSFPRIRTSIR*
Ga0150983_135327921	3300011120	Forest Soil	MLKPVKRDHKKPYSSPIITVYGTVRELTQKVGLRSRTDGGRFP
Ga0137392_103080542	3300011269	Vadose Zone Soil	MRKSVERGAKQPYTTPILTVYGTVRELTQRVGLRRARDGGRFPRVRTSMH*
Ga0137389_102719062	3300012096	Vadose Zone Soil	MRKSVERGAKKPYTTPILTVYGTVRELTQRVGLRRARDGGRFPRVRTSMH*
Ga0137388_101057421	3300012189	Vadose Zone Soil	MRKSVERGAKKPYTTPILTVYGTVRELPPRVGLRRARDGGRFPRVRTSMH*
Ga0137363_101265312	3300012202	Vadose Zone Soil	MRKSVERGTKKPYSSPILTVYGTVRELTQKVALRRARDGGRFPRVRTSIR*
Ga0181537_101058952	3300014201	Bog	MLKPVQRDPRKPYAPPKLSVYGTVKELTKKVGLRKTRDGGSLPRFKTAM*
Ga0182015_1000070441	3300014495	Palsa	MLKPVERDNKKPYSSPMITVYGTVEELTKKVGIKGNSDGGRSSQANKTHAG*
Ga0187802_100022025	3300017822	Freshwater Sediment	MAKPVQRDVKKPYSSPLLTVYGTVQNLTQKVGLVRHTDGGRFPRLRTSTH
Ga0187802_101109122	3300017822	Freshwater Sediment	MVKPVKQDGKKPYTSPILTVYGTVRELTQKVGLVRHTDGGRFPRPRTSLR
Ga0187802_103474431	3300017822	Freshwater Sediment	MDKPVKRDGKKPYTSPILTVYGTVRELTQKVGLVRHTDGGRIPRPRTSLH
Ga0187820_11007921	3300017924	Freshwater Sediment	KPYTSPILTVYGTVRELTQKVGLVRHTDGGRFPRPRTSLH
Ga0187814_104509831	3300017932	Freshwater Sediment	LACGGPEMDKPVKQDGKKLYTPSILTVYGTIRELTQAVGLRRTRDGGSFPTIRTALR
Ga0187801_100120513	3300017933	Freshwater Sediment	MVKPVKQDGRKPYTSPILTVYGTVRELTQKVGLVRHTDGGRFPRPRTSLH
Ga0187775_100319642	3300017939	Tropical Peatland	MHKPVERGKKKVYSPPLLTVYGTVQELTQRVGLRRQRDGGRFPRVRTSIR
Ga0187808_104348951	3300017942	Freshwater Sediment	MDKPVKQDGKKPYTPPILTVYGTIRDLTQAVGLRRTRDGGSFPTIRTALR
Ga0187879_100173122	3300017946	Peatland	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGIQGHSDGGRFPRAKTHV
Ga0187817_100432212	3300017955	Freshwater Sediment	MDKPVKQDGKKLYTPPILTVYGTIRELTQAVGLRRTRDGGSFPTIRTALR
Ga0187778_100130703	3300017961	Tropical Peatland	MDKPVKPDGKKPYTSPLLTVYGTVRELTQKVGLLRTQDGGRFPRVRTSVR
Ga0187783_108727552	3300017970	Tropical Peatland	MDKPVKPDGKKPYTSPILTVYGTVRELTQAIGLLRRTDSGRFPRVRTSMH
Ga0187781_1000010512	3300017972	Tropical Peatland	MDKPVKRDGKKPYTSPILTVYGTVRELTQKVGLLRTQDSGRFPRVRTSVR
Ga0187781_1000013242	3300017972	Tropical Peatland	MAKGGQGGTKKPYSSPILTIYGTVQELTQKVALRRASDNGRFPRVRTSAV
Ga0187816_100198453	3300017995	Freshwater Sediment	MDKPVKQDGKKPYTPPILTVYGTIRDLTQAVGLRRTRDGGSIPTIRTALR
Ga0187867_100722592	3300018033	Peatland	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRSNNDGGRFPRAKTHV
Ga0187863_100141443	3300018034	Peatland	MPKPAIRMPKKPYSSPILTTYGTVQELTQKVGLRKSNDGGKYPMIKTQLA
Ga0187859_100698652	3300018047	Peatland	MLKPVKRDLKKPYSSPKLTNYGTVQQLTQKVGLRKSSDGGRFPRYKTHM
Ga0210407_1000005830	3300020579	Soil	MGKPVNRDPKKVYSSPVLTVYGTVQQLTQKVGLRRTSDGGAFPRIRTHV
Ga0210407_100008637	3300020579	Soil	MLKPVKRDNKKPYSSPIITKYGTVQELTQKVGGSQTQDGGVFPRVRTHA
Ga0210407_100802683	3300020579	Soil	MPKPIERGAKKQYLSPVLTVYGTVRELTQKVALRRARDGGRFPRVRTSLR
Ga0210407_101738782	3300020579	Soil	MRKDIERGKKKPYSSPILTVFGTVRELTQKVGLVRARDGGSFPRVRTSLR
Ga0210407_102134162	3300020579	Soil	MLKPVKRDHKKPYSSPIITVYGTVRELTQKVGLRSRTDGGRFPRSKTHV
Ga0210399_100621994	3300020581	Soil	MGNPVKRAPKKPYSAPALTIYGTVQELTQKVGLRKNRDGGRAPRVRTAL
Ga0210399_100817343	3300020581	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRSRTDGGRFPRSKTHV
Ga0210399_104981682	3300020581	Soil	MAKSFKRILPRKPYSAPVLTVYGTVQELTQKVGAFKARDGGRFPRIRTSLR
Ga0210395_100921863	3300020582	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKVSIRSNNDGGHFPRVKTHA
Ga0210401_100119823	3300020583	Soil	MLKPVKRDNKKPYLSPAIIVYGTVQQLTQKVGLAGTNDNGHNLKIKTAIA
Ga0210401_100522113	3300020583	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQRVGFTKNNDGGQFPRTKTHA
Ga0210401_100560823	3300020583	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKKGLRSNNDGGRFPRAKTHV
Ga0210406_100172535	3300021168	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQQVGISHTNDGGSTPRIKTQV
Ga0210405_101541722	3300021171	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKVSIRNNNDGGHFPRVKTHA
Ga0210396_102490312	3300021180	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQRVGLRSNNDGGHFPRTK
Ga0210388_100491133	3300021181	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGIRSNGDGGRFPRAKTHV
Ga0210388_100838662	3300021181	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGLRSNGDGGRFPRAKTHV
Ga0210388_101105082	3300021181	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKVSLRSNNDGGHFPRVKTHA
Ga0210393_100361415	3300021401	Soil	MLKPVKRDFKKPYSSPKLTTYGNVQQLTQKVGLRKSSDGGRFPRYKTHM
Ga0210385_103155861	3300021402	Soil	KPYSSPKLTNYGTVQQLTQKVGLRKSSDGGRFPRYKTHM
Ga0210397_100307295	3300021403	Soil	MGNPVKRAPKKPYSAPALTIYGTVQELTQKIGLRKNRDGGRAP
Ga0210389_100439213	3300021404	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKVGLRSNNDGGHFPRTKTHA
Ga0210389_100847063	3300021404	Soil	MLKPVKRDSKKPYSAPKLCVYGRVQELTRKNGLRKTSDGGHFPKLKTHI
Ga0210389_107661992	3300021404	Soil	MLKPAKRDPKKSYSSPILTTYGTVKQLTQKVGLRKTPDGGSRLKIKTHM
Ga0210387_1000073412	3300021405	Soil	MLKPVTRDNRKPYSSPIITIYGTVQELTQKVSIRSNNDGGHFPRVKTHA
Ga0210387_100071386	3300021405	Soil	MLKPVKRDNKKPYSAPLITVYGTVRELTQQIGLRGTKDGGRFPTARTHT
Ga0210387_100179762	3300021405	Soil	MDKLAKKGQKKTYSTPLLTVYGTVRELTQKIGAFKHRDGGRFPRIRTSLR
Ga0210394_100004565	3300021420	Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTRQVGISHTNDGGSTPRIKTQV
Ga0210394_1000288810	3300021420	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRSRSDGGRFPRARTHV
Ga0210394_1000356419	3300021420	Soil	MGNPVKRAPKKPYSAPALTIYGTVQELTQKIGLRKNRDGGRAPRVRTAL
Ga0210384_1000036714	3300021432	Soil	MRESTERGPKKPYSSPLLTVYGTVRELTQKVGLVRHADGGRFPRVRTSLR
Ga0210391_100047473	3300021433	Soil	MRKPVKLNNKKPYSPPLITVYGTVQELTQMKGKKGTSDGGSFPRFATHV
Ga0210390_100019674	3300021474	Soil	MLKPVKRDNKKPYSSPRIIVYGTVQELTQKVGLRKTGDGGNFPRIRTHA
Ga0210410_115743412	3300021479	Soil	MLKPVKRDNKKPYSAPIITVYGTVQELTQLVGATQTNDGGVFPRNKTHA
Ga0210409_101525613	3300021559	Soil	MLKPVKRDNKKPYLSPAIIVYGTVQQLTQKVGLAGTNDNGHYLK
Ga0212123_1000943312	3300022557	Iron-Sulfur Acid Spring	MGNPVKRAPKKPYSAPALTIYGTVQELTQKVGLRKNRDGGRAPRVRTSL
Ga0242665_100790582	3300022724	Soil	VMGKPVNRDPKKVYSSPVLTVYGTVQQLTQKVGLRRTSDGGAFPRIRTHV
Ga0242654_104007491	3300022726	Soil	MPKPIERGAKKQYLSPVLTVYGTVRELTQKVALRRARDGGRFPRVRTSL
Ga0228598_10915611	3300024227	Rhizosphere	MLKPVKRDIKKPYSSPIITVYGTVRELTQKVGLRSQTDGGRFPRSKTHI
Ga0224564_10387312	3300024271	Soil	MLKPVIRDYKKPYSSPIITVYGTIQELTQKKGLRGNNDGGRFPRGKTHV
Ga0209871_10458182	3300026217	Permafrost Soil	MLKPVKRDSKKPYSSPTLTIYGTVQQLTKKVGLRKTPDGGTRLRIKTHL
Ga0209010_100023813	3300027370	Forest Soil	MPKPVKRDNKKPYSSPIITVYGTVRELTQKIGIHGNSDGGRIPRARTHI
Ga0209421_10332562	3300027432	Forest Soil	MDKLAKKGQKKTYSTPLLTVYGTVRELTQKIGAFKLRDGGRFPRIRTSVR
Ga0209421_11121702	3300027432	Forest Soil	MLKPVKRDLKKPYSSPKLTNYGTVQQLTQKVGLRKSSDGGRF
Ga0209525_10050803	3300027575	Forest Soil	MLKPVKRDFKKPYSSPKLTTYGNVQQLTQKVGLRKTSDGGRFPRYKTHM
Ga0209007_11457712	3300027652	Forest Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQKVSLRSNNDGGHF
Ga0209655_100061872	3300027767	Bog Forest Soil	MLKPVKRDTKKPYSSPIITVYGTVRELTQRVGMRSNNDGGHFPRVKTHA
Ga0209655_100105762	3300027767	Bog Forest Soil	MLKPVKRDNKKPYSSPIITVYGTVQELTQRVGMRSNNDGGHFPRVKTHA
Ga0209655_100409062	3300027767	Bog Forest Soil	MLKPVKKGSKKPYLSPLLTVYGTVQQLTQKTGLRRSPDGGRFPRTKTHL
Ga0209655_100449392	3300027767	Bog Forest Soil	MPKPDLRVPKKAYSSPILTTYGTVQELTQKVGLRKSNDGGKYPMIKTQM
Ga0209655_100967482	3300027767	Bog Forest Soil	MAKPVQRDPKKPYSSPLLTIYGTVQDLTQKVALVRHTDGGKFPRLRTSAT
Ga0209655_102042101	3300027767	Bog Forest Soil	MPNAVKHDNKKPYSSPVITVYGTVQVLTQTIGLRGT
Ga0209274_100269234	3300027853	Soil	MLKPVKRDNKKPYSSPVITIYGTVQELTQKVSIRSNNDGGHFPRVKTHA
Ga0209693_102017472	3300027855	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGLRSTTDGGRFPRSKTHV
Ga0209167_100055853	3300027867	Surface Soil	MLKPVKRDKKKPYSSPIITVYGTVRELTQKVGILHKNDGGHFPRVKTHA
Ga0209169_104580842	3300027879	Soil	CVRRFAMLKPVKRDNKKPYSSPIITVYGTVQELTQKVSIRSNNDGGHFPRVKTHA
Ga0209275_104326632	3300027884	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKKGLRSNNDGGR
Ga0209380_102097761	3300027889	Soil	MLKPVKRDHKKPYSSPIITVYGTVRELTQKVGLRSRTDGGR
Ga0209380_102098442	3300027889	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRSRTDGGR
Ga0209380_103465512	3300027889	Soil	NKKPYSSPIITVYGTVQELTQKVSLRSNNDGGHFPRVKTHA
Ga0209006_1000003461	3300027908	Forest Soil	MLKPVKRDNKKPYSPPIITVYGTVQELTQQVGVSHTNDGGSTPRIKTHV
Ga0209006_1000508610	3300027908	Forest Soil	MLKSVKRDSKKPYSSPKLTTYGTVQQLTQKKGLRQNADGGRFPRFKTHI
Ga0302234_101620061	3300028773	Palsa	KKPYSSPILTTYGTVQELTQKVGLRKSNDGGKYPMIKTQLA
Ga0311368_107438041	3300029882	Palsa	ARSGITFVRRFAMLKPVKRDPKKPYSCPKLSVYGTVQQLTQKVGLRQTADGGPRFRTKTH
Ga0311369_100475472	3300029910	Palsa	MLKPVKRDPKKPYSCPKLSVYGTVQQLTQKVGLRQTADGGPRFRTKTHL
Ga0311352_101877622	3300029944	Palsa	MVKPVKRDSKKPYSCPKLSVYGTVQQLTQKVGLRQTADGGPRFRTKTHL
Ga0311339_101851602	3300029999	Palsa	MLKPVKRDSKKPYSCPKLSVYGTVQQLTQKVGLRQTADGGPRFRTKTHL
Ga0302177_101385051	3300030053	Palsa	RDPKKPYSCPKLSVYGTVQQLTQKVGLRQTADGGPRFRTKTHL
Ga0311354_104872421	3300030618	Palsa	PVKRDSKKPYSCPKLSVYGTVQQLTQKVGLRQTADGGPRFRTKTHL
Ga0302317_100474202	3300030677	Palsa	MLKPVKRDLKKPYSSPKLTTYGTVQQLTQKVGLRKSSDGGRFPRYKTHM
Ga0170834_1039007072	3300031057	Forest Soil	MLKPVKRDKKKPYSSPIITVYGTVQELTQKVGIRRHNDAGVFPRNKTHI
Ga0170823_112532252	3300031128	Forest Soil	MLKPVKRDKKKPYSSPIITVYGTVQELTQKVGIRRHNDAGVFPRNKTH
Ga0302326_114666411	3300031525	Palsa	MLKPVKRDSKKPYSSPKLTIYGTVRQLTQKVGLRRASDGGRFPRIKTHM
Ga0310686_1065833792	3300031708	Soil	MLKPVKRDLKKPYSSPKLTSYGTVQQLTQKVGLRKSSDGGRFPRYKTHM
Ga0310686_1065952142	3300031708	Soil	GITCVRRFAMLKPVKRDNKKPYSSPIITVYGTVQELTQKVSIRSNNDGGHFPRVKTHA
Ga0310686_1087701962	3300031708	Soil	MDKKLQNSAKKVYSPPQLTVYGTVRELTQQVGPTQRSDGGKFPKNRTGIH
Ga0310686_1150883932	3300031708	Soil	MRKQVKLNIKKPYSPPLITVYGTVQELTQKKGLRGTSDGGHFPRFATHV
Ga0310686_1162310642	3300031708	Soil	MLKPVKRDNKKPYSSPIITVYGTVRELTQKIGIRGHSDGGRFPHAKTHV
Ga0310686_1179870202	3300031708	Soil	MPKPVKRDSKKPYSSPKLTNYGTVQQLTQKVGLRKNSDGGRFPRYKTHM
Ga0310686_1193125735	3300031708	Soil	MGKSVKRSPKKPYSVPVLTVYGTVQELTQAVGLRQRPDGGRAPRVRTSV
Ga0307476_100054023	3300031715	Hardwood Forest Soil	MVKPLKEVNKKPYSSPIITIYGTVQELTKKLGLGGNADGGGFPRNHTHV
Ga0307476_102030732	3300031715	Hardwood Forest Soil	MDKLAKKGQKKTYSTPLLTVYGTVRELTQKVGAFKLRDNGRFPRIRTSLR
Ga0307474_100004996	3300031718	Hardwood Forest Soil	MLKPVKRDFKKPYSSPKLTTYGNVQQLTQKVGLRRSPDGGRFPRAKTHM
Ga0307474_101690272	3300031718	Hardwood Forest Soil	MGNPVKRAPKKPYSAPVLTVYGTVQELTRKVGLRHRRDGGRAPRVRTSL
Ga0307469_102151033	3300031720	Hardwood Forest Soil	MDKLAKKGQKKTYSIPLLTVYGTVRELTQKIGAFKQRDGGRFPRIRTSMHMH
Ga0307475_100067947	3300031754	Hardwood Forest Soil	MRKSVERGTKKPYSSPILTVYGTVRELTQRVGLRRHRDGGRFPRIRTSLR
Ga0307475_100672422	3300031754	Hardwood Forest Soil	MPKPVERGATKQYTTPILTVYGTVRELTQRVGLRRHRDGGRFPRVRTSMH
Ga0307473_100036826	3300031820	Hardwood Forest Soil	MPKPVERGAKKPYTTPILTVYGTVRELTQRVGLRRARDGGRFPRIRTSMH
Ga0307479_100658364	3300031962	Hardwood Forest Soil	MRKSVERGTKKPYSSPILTVYGTVRELTQRVGLRRHRDGGRFPRIRTGLR
Ga0307471_1000086295	3300032180	Hardwood Forest Soil	MPKPVERGAKKPYTTPTLTVYGTVRELTQRVGLRRARDGGRFPRIRTSMH
Ga0307471_1000545463	3300032180	Hardwood Forest Soil	MRKSVERGAKKPYSSPILTVYGTVRDLTQRVGLRRQRDGGRFPRVRTSIR
Ga0307471_1001001603	3300032180	Hardwood Forest Soil	MPKPIERGLKKPYSTPILTVYGTVRELTQRVGLRRHRDGGRFPRVRTSIR
Ga0307472_1000192992	3300032205	Hardwood Forest Soil	MPKPIERGLKKPYSTPILTVYGTVRELTQRVGLRRQRDGGRFPRVRTSIR
Ga0307472_1016170412	3300032205	Hardwood Forest Soil	MSKPVKQGKKKAYASPQLTVYGTVLELTQRVGLRRQRDGGRFPRVRTSVR
Ga0348332_108554091	3300032515	Plant Litter	MLKPVKRDNKKPYSSPIITVYGTVRELTQKVGLRRNADGGRFPRARTHV
Ga0335074_10000004303	3300032895	Soil	MARAVEKESKKPYAPPTLTVYGTVHELTKKVGLARSLDGGRFPRVRTAI
Ga0335072_105507972	3300032898	Soil	MVRPGNQEPKKPYSAPKLTIYGTVRELTMKVGPVRHLDGGRFPRVRTALH
Ga0335073_100571732	3300033134	Soil	MARPGNRDEKKPYNAPTLTIYGTVRDLTRKVALKRELDGGRFPRVRTSVT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033135

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences