Metagenome Family F032873

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F032873
Family Type	Metagenome
Number of Sequences	179
Average Sequence Length	38 residues
Representative Sequence	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGAGI
Number of Associated Samples	110
Number of Associated Scaffolds	179

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	27.93 %
% of genes from short scaffolds (< 2000 bps)	76.54 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (75.419 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (45.810 % of family members)
Environment Ontology (ENVO)	Unclassified (54.190 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (66.480 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 179 Family Scaffolds
PF03401	TctC	3.35
PF01066	CDP-OH_P_transf	2.79
PF02668	TauD	1.68
PF00005	ABC_tran	1.68
PF13242	Hydrolase_like	1.68
PF00892	EamA	1.68
PF00475	IGPD	1.12
PF00380	Ribosomal_S9	1.12
PF03480	DctP	1.12
PF08750	CNP1	1.12
PF00497	SBP_bac_3	1.12
PF03446	NAD_binding_2	1.12
PF13531	SBP_bac_11	1.12
PF02515	CoA_transf_3	1.12
PF07992	Pyr_redox_2	1.12
PF04972	BON	1.12
PF01977	UbiD	1.12
PF13442	Cytochrome_CBB3	1.12
PF06835	LptC	1.12
PF00795	CN_hydrolase	1.12
PF03328	HpcH_HpaI	1.12
PF00069	Pkinase	1.12
PF01925	TauE	0.56
PF03724	META	0.56
PF00873	ACR_tran	0.56
PF13561	adh_short_C2	0.56
PF14698	ASL_C2	0.56
PF05683	Fumerase_C	0.56
PF02775	TPP_enzyme_C	0.56
PF00578	AhpC-TSA	0.56
PF02348	CTP_transf_3	0.56
PF02540	NAD_synthase	0.56
PF05173	DapB_C	0.56
PF01494	FAD_binding_3	0.56
PF02628	COX15-CtaA	0.56
PF06808	DctM	0.56
PF03477	ATP-cone	0.56
PF09242	FCSD-flav_bind	0.56
PF12826	HHH_2	0.56
PF13563	2_5_RNA_ligase2	0.56
PF13416	SBP_bac_8	0.56
PF04909	Amidohydro_2	0.56
PF01654	Cyt_bd_oxida_I	0.56
PF00572	Ribosomal_L13	0.56
PF02574	S-methyl_trans	0.56
PF03972	MmgE_PrpD	0.56
PF09339	HTH_IclR	0.56
PF13202	EF-hand_5	0.56
PF02894	GFO_IDH_MocA_C	0.56
PF04143	Sulf_transp	0.56
PF04397	LytTR	0.56
PF00561	Abhydrolase_1	0.56
PF00756	Esterase	0.56
PF10861	DUF2784	0.56
PF08007	JmjC_2	0.56
PF13847	Methyltransf_31	0.56
PF01869	BcrAD_BadFG	0.56
PF01121	CoaE	0.56
PF02910	Succ_DH_flav_C	0.56
PF02470	MlaD	0.56
PF00535	Glycos_transf_2	0.56
PF00596	Aldolase_II	0.56
PF13714	PEP_mutase	0.56
PF00378	ECH_1	0.56
PF00313	CSD	0.56
PF00044	Gp_dh_N	0.56
PF04354	ZipA_C	0.56
PF04339	FemAB_like	0.56
PF04355	SmpA_OmlA	0.56
PF02254	TrkA_N	0.56
PF02653	BPD_transp_2	0.56
PF02685	Glucokinase	0.56
PF00515	TPR_1	0.56
PF00300	His_Phos_1	0.56
PF00072	Response_reg	0.56
PF01882	DUF58	0.56
PF02391	MoaE	0.56
PF00730	HhH-GPD	0.56
PF16320	Ribosomal_L12_N	0.56
PF13432	TPR_16	0.56
PF05977	MFS_3	0.56
PF00903	Glyoxalase	0.56
PF16576	HlyD_D23	0.56
PF04107	GCS2	0.56
PF01963	TraB_PrgY_gumN	0.56
PF02880	PGM_PMM_III	0.56
PF08309	LVIVD	0.56
PF04290	DctQ	0.56
PF03992	ABM	0.56
PF02777	Sod_Fe_C	0.56
PF00342	PGI	0.56
PF05673	DUF815	0.56
PF00768	Peptidase_S11	0.56
PF07883	Cupin_2	0.56
PF00977	His_biosynth	0.56
PF03033	Glyco_transf_28	0.56
PF02844	GARS_N	0.56
PF00106	adh_short	0.56
PF01144	CoA_trans	0.56
PF01597	GCV_H	0.56
PF01475	FUR	0.56
PF02601	Exonuc_VII_L	0.56
PF10609	ParA	0.56
PF03781	FGE-sulfatase	0.56
PF01226	Form_Nir_trans	0.56
PF08308	PEGA	0.56
PF01300	Sua5_yciO_yrdC	0.56
PF00821	PEPCK_GTP	0.56
PF07475	Hpr_kinase_C	0.56
PF02881	SRP54_N	0.56
PF13098	Thioredoxin_2	0.56
PF02684	LpxB	0.56
PF01023	S_100	0.56
PF04613	LpxD	0.56
PF01783	Ribosomal_L32p	0.56

COG ID	Name	Functional Category	% Frequency in 179 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	4.47
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.35
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	2.79
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	2.79
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	2.79
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.68
COG0103	Ribosomal protein S9	Translation, ribosomal structure and biogenesis [J]	1.12
COG0131	Imidazoleglycerol phosphate dehydratase HisB	Amino acid transport and metabolism [E]	1.12
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.12
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.12
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.12
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.12
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.12
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	1.12
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.56
COG1493	Serine kinase of the HPr protein, regulates carbohydrate metabolism	Signal transduction mechanisms [T]	0.56
COG1916	Pheromone shutdown protein TraB, contains GTxH motif (function unknown)	Function unknown [S]	0.56
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.56
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.56
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.56
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.56
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.56
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	0.56
COG1570	Exonuclease VII, large subunit	Replication, recombination and repair [L]	0.56
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.56
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.56
COG2116	Formate/nitrite transporter FocA, FNT family	Inorganic ion transport and metabolism [P]	0.56
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.56
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	0.56
COG2607	Predicted ATPase, AAA+ superfamily	General function prediction only [R]	0.56
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.56
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.56
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	0.56
COG3115	Cell division protein ZipA, interacts with FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	0.56
COG3146	Predicted N-acyltransferase	General function prediction only [R]	0.56
COG3187	Heat shock protein HslJ	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.56
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.56
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.56
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.56
COG0102	Ribosomal protein L13	Translation, ribosomal structure and biogenesis [J]	0.56
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.56
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.56
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.56
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.56
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.56
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.56
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	0.56
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	0.56
COG0333	Ribosomal protein L32	Translation, ribosomal structure and biogenesis [J]	0.56
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	0.56
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.56
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.56
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.56
COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent	Energy production and conversion [C]	0.56
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.56
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.56
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.56
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.56
COG0763	Lipid A disaccharide synthetase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG0837	Glucokinase	Carbohydrate transport and metabolism [G]	0.56
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.56
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.56
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.56
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.42 %
Unclassified	root	N/A	24.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.42 %
Unclassified	root	N/A	24.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.42 %
Unclassified	root	N/A	24.58 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.78 %
Unclassified	root	N/A	24.58 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	35.75 %
Unclassified	root	N/A	24.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.23 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.58 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	6.70 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3.35 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	1.12 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.12 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.56 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.58 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.12 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.12 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	1.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.68 %
Betaproteobacteria bacterium SG8_41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_41	0.56 %
Sulfuricellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae	0.56 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	0.56 %
Chloroflexi bacterium RBG_16_64_32	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_32	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.56 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.56 %
Gallionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae	0.56 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.58 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.12 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	1.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.68 %
Sulfuricella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuricella	0.56 %
Gallionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella	0.56 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.56 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.56 %
Betaproteobacteria bacterium SG8_41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_41	0.56 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	0.56 %
Chloroflexi bacterium RBG_16_64_32	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_32	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.58 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.12 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	1.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.68 %
unclassified Gallionella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → unclassified Gallionella	0.56 %
Sulfuricella denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuricella → Sulfuricella denitrificans	0.56 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	0.56 %
Comamonas thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas thiooxydans	0.56 %
Betaproteobacteria bacterium SG8_41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_41	0.56 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	0.56 %
Chloroflexi bacterium RBG_16_64_32	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_32	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.58 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.12 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	1.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.68 %
Gallionella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → unclassified Gallionella → Gallionella sp.	0.56 %
Pseudomonas syringae group genomosp. 1	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1	0.56 %
Sulfuricella denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuricella → Sulfuricella denitrificans	0.56 %
Comamonas thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas thiooxydans	0.56 %
Betaproteobacteria bacterium SG8_41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_41	0.56 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	0.56 %
Chloroflexi bacterium RBG_16_64_32	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_32	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.58 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.12 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1.12 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	1.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.68 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.56 %
Gallionella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → unclassified Gallionella → Gallionella sp.	0.56 %
Sulfuricella denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuricella → Sulfuricella denitrificans	0.56 %
Comamonas thiooxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas thiooxydans	0.56 %
Betaproteobacteria bacterium SG8_41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_41	0.56 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	0.56 %
Chloroflexi bacterium RBG_16_64_32	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_32	0.56 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.56 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.56 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001372\|YBBDRAFT_1132864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sulfuricellaceae → Sulfuricella → Sulfuricella denitrificans	8958	Open in IMG/M
3300002121\|C687J26615_10003813	Not Available	3276	Open in IMG/M
3300002121\|C687J26615_10051603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1023	Open in IMG/M
3300002121\|C687J26615_10087733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	777	Open in IMG/M
3300004009\|Ga0055437_10320839	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005545\|Ga0070695_100155071	Not Available	1602	Open in IMG/M
3300005829\|Ga0074479_10186172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	29265	Open in IMG/M
3300005829\|Ga0074479_10926358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9850	Open in IMG/M
3300005836\|Ga0074470_11590447	Not Available	1426	Open in IMG/M
3300006847\|Ga0075431_100673221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1014	Open in IMG/M
3300006853\|Ga0075420_100231687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1608	Open in IMG/M
3300006969\|Ga0075419_11426822	Not Available	517	Open in IMG/M
3300007004\|Ga0079218_10543864	Not Available	1042	Open in IMG/M
3300007004\|Ga0079218_11155553	Not Available	797	Open in IMG/M
3300009430\|Ga0114938_1088388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1132	Open in IMG/M
3300009527\|Ga0114942_1229539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	684	Open in IMG/M
3300009597\|Ga0105259_1006210	Not Available	2251	Open in IMG/M
3300009597\|Ga0105259_1026364	Not Available	1234	Open in IMG/M
3300009597\|Ga0105259_1172985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	526	Open in IMG/M
3300009609\|Ga0105347_1000680	All Organisms → cellular organisms → Bacteria → Proteobacteria	15720	Open in IMG/M
3300009609\|Ga0105347_1517964	Not Available	519	Open in IMG/M
3300009610\|Ga0105340_1000039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	61301	Open in IMG/M
3300009610\|Ga0105340_1094081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1198	Open in IMG/M
3300009678\|Ga0105252_10046776	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300009805\|Ga0105079_1046670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300009814\|Ga0105082_1036820	Not Available	794	Open in IMG/M
3300010391\|Ga0136847_10367134	All Organisms → cellular organisms → Bacteria	3140	Open in IMG/M
3300010391\|Ga0136847_10480156	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300010391\|Ga0136847_12524045	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300010400\|Ga0134122_10433031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300011395\|Ga0137315_1005336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1378	Open in IMG/M
3300011398\|Ga0137348_1004006	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300011398\|Ga0137348_1014073	Not Available	1218	Open in IMG/M
3300011398\|Ga0137348_1023040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	985	Open in IMG/M
3300011402\|Ga0137356_1002603	All Organisms → cellular organisms → Bacteria	3044	Open in IMG/M
3300011403\|Ga0137313_1002248	All Organisms → cellular organisms → Bacteria → Proteobacteria	4268	Open in IMG/M
3300011405\|Ga0137340_1006068	Not Available	2180	Open in IMG/M
3300011409\|Ga0137323_1062415	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300011413\|Ga0137333_1086852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	722	Open in IMG/M
3300011415\|Ga0137325_1033146	Not Available	1059	Open in IMG/M
3300011415\|Ga0137325_1067948	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300011415\|Ga0137325_1069345	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300011416\|Ga0137422_1080137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	784	Open in IMG/M
3300011417\|Ga0137326_1005584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3003	Open in IMG/M
3300011419\|Ga0137446_1060610	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300011420\|Ga0137314_1043653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1087	Open in IMG/M
3300011420\|Ga0137314_1052858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	982	Open in IMG/M
3300011420\|Ga0137314_1057816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	939	Open in IMG/M
3300011420\|Ga0137314_1162357	Not Available	543	Open in IMG/M
3300011421\|Ga0137462_1047978	Not Available	923	Open in IMG/M
3300011430\|Ga0137423_1122075	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300011433\|Ga0137443_1191703	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300011435\|Ga0137426_1074919	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	923	Open in IMG/M
3300011437\|Ga0137429_1114595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	825	Open in IMG/M
3300011438\|Ga0137451_1179520	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300011440\|Ga0137433_1007902	All Organisms → cellular organisms → Bacteria → Proteobacteria	3264	Open in IMG/M
3300011440\|Ga0137433_1045720	Not Available	1295	Open in IMG/M
3300011445\|Ga0137427_10011451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	3521	Open in IMG/M
3300011445\|Ga0137427_10039114	All Organisms → cellular organisms → Bacteria → Proteobacteria	1868	Open in IMG/M
3300011445\|Ga0137427_10454979	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300012034\|Ga0137453_1097584	Not Available	577	Open in IMG/M
3300012038\|Ga0137431_1184871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Gallionella → unclassified Gallionella → Gallionella sp.	592	Open in IMG/M
3300012039\|Ga0137421_1005580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2542	Open in IMG/M
3300012039\|Ga0137421_1067920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	993	Open in IMG/M
3300012039\|Ga0137421_1166162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300012041\|Ga0137430_1009552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2439	Open in IMG/M
3300012041\|Ga0137430_1061225	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300012041\|Ga0137430_1141930	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012133\|Ga0137329_1004537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1359	Open in IMG/M
3300012157\|Ga0137353_1004186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2081	Open in IMG/M
3300012159\|Ga0137344_1078150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	608	Open in IMG/M
3300012161\|Ga0137336_1037015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	883	Open in IMG/M
3300012164\|Ga0137352_1077658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	661	Open in IMG/M
3300012167\|Ga0137319_1002388	All Organisms → cellular organisms → Bacteria → Proteobacteria	4319	Open in IMG/M
3300012172\|Ga0137320_1012209	All Organisms → cellular organisms → Bacteria → Proteobacteria	1668	Open in IMG/M
3300012172\|Ga0137320_1019206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1352	Open in IMG/M
3300012172\|Ga0137320_1047203	Not Available	889	Open in IMG/M
3300012172\|Ga0137320_1051042	Not Available	857	Open in IMG/M
3300012172\|Ga0137320_1117992	Not Available	565	Open in IMG/M
3300012174\|Ga0137338_1002654	All Organisms → cellular organisms → Bacteria → Proteobacteria	3010	Open in IMG/M
3300012175\|Ga0137321_1079315	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012225\|Ga0137434_1006515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1223	Open in IMG/M
3300012670\|Ga0137335_1026526	Not Available	560	Open in IMG/M
3300012671\|Ga0137318_1020168	Not Available	661	Open in IMG/M
3300012676\|Ga0137341_1016282	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300012676\|Ga0137341_1079671	Not Available	543	Open in IMG/M
3300014318\|Ga0075351_1038516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	840	Open in IMG/M
3300014321\|Ga0075353_1043426	Not Available	911	Open in IMG/M
3300014324\|Ga0075352_1002585	All Organisms → cellular organisms → Bacteria → Proteobacteria	3050	Open in IMG/M
3300014324\|Ga0075352_1063338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	900	Open in IMG/M
3300014324\|Ga0075352_1118120	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300014866\|Ga0180090_1009225	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300014868\|Ga0180088_1075124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	605	Open in IMG/M
3300014872\|Ga0180087_1058212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	731	Open in IMG/M
3300014873\|Ga0180066_1085992	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300014873\|Ga0180066_1091952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	624	Open in IMG/M
3300014873\|Ga0180066_1092591	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300014873\|Ga0180066_1097202	Not Available	607	Open in IMG/M
3300014873\|Ga0180066_1135132	Not Available	508	Open in IMG/M
3300014875\|Ga0180083_1119601	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300014876\|Ga0180064_1027725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300014878\|Ga0180065_1007623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2082	Open in IMG/M
3300014878\|Ga0180065_1081936	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300014879\|Ga0180062_1088955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas → Comamonas thiooxydans	695	Open in IMG/M
3300014884\|Ga0180104_1017946	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300015252\|Ga0180075_1052858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_41	677	Open in IMG/M
3300018031\|Ga0184634_10148527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1051	Open in IMG/M
3300018031\|Ga0184634_10333994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58	695	Open in IMG/M
3300018031\|Ga0184634_10569543	Not Available	500	Open in IMG/M
3300018059\|Ga0184615_10481279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	671	Open in IMG/M
3300018063\|Ga0184637_10043558	All Organisms → cellular organisms → Bacteria	2730	Open in IMG/M
3300018063\|Ga0184637_10077681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	2035	Open in IMG/M
3300018063\|Ga0184637_10106795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1723	Open in IMG/M
3300018063\|Ga0184637_10317446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	941	Open in IMG/M
3300018063\|Ga0184637_10418198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	795	Open in IMG/M
3300018063\|Ga0184637_10469990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	736	Open in IMG/M
3300018063\|Ga0184637_10537284	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300018063\|Ga0184637_10644665	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300018063\|Ga0184637_10754691	Not Available	524	Open in IMG/M
3300018077\|Ga0184633_10024522	All Organisms → cellular organisms → Bacteria → Proteobacteria	2997	Open in IMG/M
3300018077\|Ga0184633_10173596	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300018077\|Ga0184633_10274199	Not Available	864	Open in IMG/M
3300018077\|Ga0184633_10344524	Not Available	753	Open in IMG/M
3300018077\|Ga0184633_10587722	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300018079\|Ga0184627_10687556	Not Available	502	Open in IMG/M
3300018082\|Ga0184639_10026971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2907	Open in IMG/M
3300018082\|Ga0184639_10028050	All Organisms → cellular organisms → Bacteria → Proteobacteria	2854	Open in IMG/M
3300018082\|Ga0184639_10372921	Not Available	741	Open in IMG/M
3300018082\|Ga0184639_10595972	Not Available	542	Open in IMG/M
3300018083\|Ga0184628_10459575	Not Available	662	Open in IMG/M
3300018469\|Ga0190270_11077984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	835	Open in IMG/M
3300019458\|Ga0187892_10001603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	50542	Open in IMG/M
3300020060\|Ga0193717_1130686	Not Available	760	Open in IMG/M
3300024241\|Ga0233392_1025492	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300025106\|Ga0209398_1117245	Not Available	632	Open in IMG/M
3300025159\|Ga0209619_10428084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	673	Open in IMG/M
3300025160\|Ga0209109_10078331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1723	Open in IMG/M
3300025324\|Ga0209640_10886011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	696	Open in IMG/M
3300025325\|Ga0209341_11036780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_32	598	Open in IMG/M
3300025955\|Ga0210071_1001076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2819	Open in IMG/M
3300025957\|Ga0210089_1017086	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300025957\|Ga0210089_1042601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	575	Open in IMG/M
3300025962\|Ga0210070_1001268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2367	Open in IMG/M
3300025962\|Ga0210070_1035874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	595	Open in IMG/M
3300025973\|Ga0210145_1006937	Not Available	1162	Open in IMG/M
3300025979\|Ga0210078_1001008	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300025985\|Ga0210117_1004882	All Organisms → cellular organisms → Bacteria → Proteobacteria	1600	Open in IMG/M
3300027384\|Ga0209854_1096651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	528	Open in IMG/M
3300027513\|Ga0208685_1000125	All Organisms → cellular organisms → Bacteria → Proteobacteria	30132	Open in IMG/M
3300027513\|Ga0208685_1000135	All Organisms → cellular organisms → Bacteria → Proteobacteria	29037	Open in IMG/M
3300027533\|Ga0208185_1000411	All Organisms → cellular organisms → Bacteria → Proteobacteria	20296	Open in IMG/M
3300027657\|Ga0256865_1007986	All Organisms → cellular organisms → Bacteria → Proteobacteria	2831	Open in IMG/M
3300028812\|Ga0247825_10149887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1599	Open in IMG/M
3300031226\|Ga0307497_10035101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1665	Open in IMG/M
3300031949\|Ga0214473_10038902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	5583	Open in IMG/M
3300031949\|Ga0214473_10212142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	2237	Open in IMG/M
3300031965\|Ga0326597_10163143	All Organisms → cellular organisms → Bacteria → Proteobacteria	2648	Open in IMG/M
3300031965\|Ga0326597_10211691	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300031965\|Ga0326597_10650007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1118	Open in IMG/M
3300031965\|Ga0326597_11215002	Not Available	743	Open in IMG/M
3300031965\|Ga0326597_11849013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13	564	Open in IMG/M
3300031965\|Ga0326597_11970118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	541	Open in IMG/M
3300033004\|Ga0335084_12046261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	557	Open in IMG/M
3300033233\|Ga0334722_10139171	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300033233\|Ga0334722_11119839	Not Available	552	Open in IMG/M
3300033407\|Ga0214472_10131795	All Organisms → cellular organisms → Bacteria → Proteobacteria	2460	Open in IMG/M
3300033814\|Ga0364930_0014363	All Organisms → cellular organisms → Bacteria → Proteobacteria	2640	Open in IMG/M
3300033814\|Ga0364930_0033931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1728	Open in IMG/M
3300033814\|Ga0364930_0320997	Not Available	520	Open in IMG/M
3300034113\|Ga0364937_016037	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300034113\|Ga0364937_096654	Not Available	600	Open in IMG/M
3300034114\|Ga0364938_012034	Not Available	1222	Open in IMG/M
3300034114\|Ga0364938_030687	Not Available	869	Open in IMG/M
3300034114\|Ga0364938_073142	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300034147\|Ga0364925_0059130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1314	Open in IMG/M
3300034177\|Ga0364932_0110615	Not Available	1043	Open in IMG/M
3300034177\|Ga0364932_0276189	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300034178\|Ga0364934_0025570	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300034690\|Ga0364923_0023174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1402	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.32%
Host-Associated	Host-Associated	1.68%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	70.95%
Terrestrial	Environmental → Terrestrial	27.37%
Plants	Host-Associated → Plants	1.68%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	60.89%
Soil	Environmental → Terrestrial → Soil	18.99%
Floodplain	Environmental → Terrestrial → Floodplain	7.26%
Marine	Environmental → Aquatic → Marine	5.59%
Freshwater	Environmental → Aquatic → Freshwater	4.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.68%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.56%
Cave	Environmental → Terrestrial → Cave	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	60.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	10.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	7.26%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.35%
Loam	Environmental → Terrestrial → Soil → Loam	3.35%
Lake	Environmental → Aquatic → Freshwater → Lake	2.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.68%
Sand	Environmental → Terrestrial → Soil → Sand	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.68%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	60.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.26%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	7.26%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.35%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.79%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.12%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.68%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.68%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	45.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	13.41%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	7.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.03%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.68%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.68%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.56%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.56%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.56%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011395	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012133	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012161	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012670	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT293_2	Environmental	Open in IMG/M
3300012671	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT300_2	Environmental	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300024241	Subsurface microbial communities from Mancos shale, Colorado, United States - Mancos A_50_July_PB	Environmental	Open in IMG/M
3300025106	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025962	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025973	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025979	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
YBBDRAFT_11328643	3300001372	Marine Estuarine	LRARIDDDAKDGAGQYLTTAKPADKVSVDSGRNPGTGI*
C687J26615_100038131	3300002121	Soil	LRAKIGDDAKDGAGHIENMAKPADKVSADFGRNPDAGI*
C687J26615_100516032	3300002121	Soil	LRAKIGDDAKDGAGHIVNMAKLADKVSADFGRNPGTDI*
C687J26615_100877331	3300002121	Soil	AKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGTGI*
Ga0055437_103208393	3300004009	Natural And Restored Wetlands	RALRAKMGDDAKDGAGHIRHMAKPADKVSDDFGRNPGASF*
Ga0070695_1001550711	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNTRALRARIDDDAKDGAGQYPDTAKPADKVSVDSGRNPSSSI*
Ga0074479_101861721	3300005829	Sediment (Intertidal)	LRAKIGYDAKDGAGHIANMAKPADKASADFGRNPGAGIRIPNVNP
Ga0074479_109263587	3300005829	Sediment (Intertidal)	LRAKIGDDAKDGAGHIANMAKPTDKVSADFGRNPGAGI*
Ga0074470_115904471	3300005836	Sediment (Intertidal)	LRVKNGDDAKGGAEHIANMLKPADNVSADFGRNPS
Ga0075431_1006732213	3300006847	Populus Rhizosphere	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGTSI*
Ga0075420_1002316874	3300006853	Populus Rhizosphere	LRAKIGDDAKDGAGHIANMVKPADNVSADFGRNPGARI*
Ga0075419_114268221	3300006969	Populus Rhizosphere	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPRKGI*
Ga0079218_105438643	3300007004	Agricultural Soil	LRAKIGDDEKGGADSMVNTAKPSDKVSADFGRNPGTDL*
Ga0079218_111555532	3300007004	Agricultural Soil	LRAKIGDDAKAGEDSMDNTAKPADKVSADFSRNPGAGI*
Ga0114938_10883882	3300009430	Groundwater	LRAKIGGDAKDGAGHMSYMAKPADKVSADFGRNPGAGI*
Ga0114942_12295392	3300009527	Groundwater	LRAKIVDNAKDGAGHIRYMAKPADKVSGDFGRNPGAGV*
Ga0105259_10062103	3300009597	Soil	LRAKIGDDAKDGAGHIVNIAKPADKVSADFGRNPGAGI*
Ga0105259_10263642	3300009597	Soil	LRARIGDDAKDGAGHILYMAKPADKVSADFGRNPGAGI*
Ga0105259_11729852	3300009597	Soil	LRAKIGDDAKDGAGHIPNMAKPADKVSADFGRNPGTGI*
Ga0105347_10006802	3300009609	Soil	LRARIGDDAKDGAGHIEHMAKPADKVSADFGRNPGAGI*
Ga0105347_15179642	3300009609	Soil	LRAKIGDDAKDGAGHIKHMAKPFDKVSADFGRNPDAGF*
Ga0105340_10000391	3300009610	Soil	LRAKIGDDAKDGAGHIEHMAKPADKVSADFGRNPGAGI*
Ga0105340_10940811	3300009610	Soil	IGDDAKDGAGHMSYMAKPADKVSADFGRNPGAGI*
Ga0105252_100467763	3300009678	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSDDFGRNPGASI*
Ga0105079_10466701	3300009805	Groundwater Sand	LRAKIGDDAKDGAGHIWNMAKPADKVSADFGRNPGTSI*
Ga0105082_10368202	3300009814	Groundwater Sand	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGAGI*
Ga0136847_103671342	3300010391	Freshwater Sediment	LRAKIGDDAKGGAGHIANMAKPADKVSADFGRNPGAGV*
Ga0136847_104801561	3300010391	Freshwater Sediment	MGDDAKDGAGHIVYMAKPADKVSADLGRNPGADI*
Ga0136847_125240452	3300010391	Freshwater Sediment	LRAKIGDDAKDGAGHIANMPKPADKVSADFGRNPGTGI*
Ga0134122_104330311	3300010400	Terrestrial Soil	TRALRAKIVDDAKDGAGHIRYMAKPSDKVSGDFGRNPGAGV*
Ga0137315_10053362	3300011395	Soil	LRAKIGDDAKDGAGHIVYMAKPADKVSDDFGRNPGAGN*
Ga0137348_10040066	3300011398	Soil	LRAKIGDDAKDGAGHMSYMAKPADKVSADFGRNPGAGI*
Ga0137348_10140732	3300011398	Soil	LRAKIGDDAKDGAGHMAYMAKPADKVSADFGRNPGAGI*
Ga0137348_10230401	3300011398	Soil	LRAKIGDDAKDGAGHIPNMAKPADKVSADFGRNPGAGI*
Ga0137356_10026031	3300011402	Soil	TRALRAKIGDDAKDGAGHMSYMAKPADKVSADFGRNPGAGI*
Ga0137313_10022483	3300011403	Soil	LRAKIGDDAKDGAGHKSYMAKSADKVSGDFGRNPGAGI*
Ga0137340_10060681	3300011405	Soil	IGDDAKDGAGHIEHMAKPADKVSADFGRNPGAGI*
Ga0137323_10624152	3300011409	Soil	LRAKIGDDAKDGAGHIVYMAKPADKVSADFGRNPGAGI*
Ga0137333_10868521	3300011413	Soil	LRAKNGDDAKDGAGHMSYMAKPADKVSADFGRNPGATN*
Ga0137325_10331462	3300011415	Soil	LRAKIGDDAKDGAGHIPNMAKSADKVSADFGRNPGTGI*
Ga0137325_10679482	3300011415	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSDDFGRNPGADG*
Ga0137325_10693452	3300011415	Soil	LRARIGDDAKDGAGHIEHMAKPADKGSADFGRNPGAGI*
Ga0137422_10801371	3300011416	Soil	LRAKIGDDAKDGAGHMSYMAKPADKVSANFGRNPGAGI*
Ga0137326_10055841	3300011417	Soil	NTRALRAKIGDDAKDGAGHMSYMAKPPDKVSADSGRDPGAGI*
Ga0137446_10606102	3300011419	Soil	LRAKIGDDAKDGAGHIRYMAKPADKVSADFGRNPGACV*
Ga0137314_10436533	3300011420	Soil	LRAKIDDDAKDGAGHIANMAKPADKVSVDFGRNPGTGI*
Ga0137314_10528582	3300011420	Soil	LRAKIGDHAKDGAGHIANMAKPADKVSADFGRNPGATI*
Ga0137314_10578161	3300011420	Soil	LRAKIVDGAKDGAGHIANMAKPADKVSNDFGRNPGADI*
Ga0137314_11623571	3300011420	Soil	LRAKIGDDAKDGAGHIVYMAKPADKVSADSGRNPGAGI*
Ga0137462_10479782	3300011421	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSADFVRNPGADG*
Ga0137423_11220751	3300011430	Soil	LRAKIGDDAKDGAGHKSYMAKSADKVSGDFGRNPG
Ga0137443_11917032	3300011433	Soil	LRAKIGDDAKDGAGHIRNMAKPADKVSADFGRNPGAGI*
Ga0137426_10749191	3300011435	Soil	LRAKIGDDAKDGAGHIRNMAKPADKVSADFGRNPGASI*
Ga0137429_11145952	3300011437	Soil	LRAKIGDDAKDGAGHIANMPKPADKVSADFGRNPGA
Ga0137451_11795201	3300011438	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGADG*
Ga0137433_10079025	3300011440	Soil	RAKIGDDAKDGAGHKSYMAKSADKVSGDFGRNPGSGI*
Ga0137433_10457203	3300011440	Soil	LRAKIGDDAKDGAGHIGHMAKPADKVSADFGRNPGAGM*
Ga0137427_100114515	3300011445	Soil	LRAKIGDDAKDGAGHIENMAKPADKVSADFGRNPGAAI*
Ga0137427_100391141	3300011445	Soil	CALRASIDDDAKDGTGQYSYTAKPAYKVSVDSGRNPGTSI*
Ga0137427_104549791	3300011445	Soil	LRAKIDDDAKDGAGHIANMAKPADKVSVDFGRNPGADG*
Ga0137453_10975843	3300012034	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPG
Ga0137431_11848711	3300012038	Soil	LRAKIGDDAKDGAGHMVNMAKPADKVSADFGRNPGAGI*
Ga0137421_10055801	3300012039	Soil	LRAKIGDDAKDGAGHIPNMAKPADKVSTDFGRNPGTNI*
Ga0137421_10679201	3300012039	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGTGI*
Ga0137421_11661621	3300012039	Soil	LRAKIGDDAKDGAGHIENMAKPADKVSADFGRNPGADG*
Ga0137430_10095521	3300012041	Soil	IGDDAKDGAGHIANMAKPADKVSDDFGRNPGASI*
Ga0137430_10612252	3300012041	Soil	LRAKIGDDAKDGAGHIANMAKPTDKVSGDFGRNPGADG*
Ga0137430_11419302	3300012041	Soil	LRVKIGDDAKDGAGHIVYMAKPADKVSADFGRNPGAGI*
Ga0137329_10045372	3300012133	Soil	LRAKIGDDAKDGAGHIVNMAKTADKVSADFGRNPGTGI*
Ga0137353_10041861	3300012157	Soil	NTRALRAKIGDDAKDGAGHIGHMAKPADKVSADSGRNPGAGV*
Ga0137344_10781501	3300012159	Soil	LRAKIGDDAKDGAGHIEHMAKPADKVSADFGRNPGAGIRTSNDIS
Ga0137336_10370152	3300012161	Soil	LRARIGDDAKDGAGHIPNMAKPADKVSADFGRNPGTGI*
Ga0137352_10776581	3300012164	Soil	NTRALRAKIGDDAKDGAGHMSYMAKPADKVSADFGRNPGAGV*
Ga0137319_10023883	3300012167	Soil	LRAKIGDDAKDGAGHIPNMAKPADKVSADFGRNPGT
Ga0137320_10122091	3300012172	Soil	LRAKIGDDAKDGAGHLSYMAKPADKVSADFGRNPGAGV*
Ga0137320_10192063	3300012172	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGA
Ga0137320_10472031	3300012172	Soil	LRAKIGDDAKDGAGHMSYMAKPADKVSADFGRNPG
Ga0137320_10510421	3300012172	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGADG
Ga0137320_11179921	3300012172	Soil	LRAKIGDDAKDGAGHMSYMAKPADKVSADSGRNPGAGI*
Ga0137338_10026544	3300012174	Soil	LRAKIGDDAKDGAGHIEHMAKPADKVSADSGRNPGAGI*
Ga0137321_10793152	3300012175	Soil	ALRAKTGDDAKDGAGHIANMAKPADKVSDDFGRNPSKGI*
Ga0137434_10065152	3300012225	Soil	RARIGDDAKDGAVHMAYTAKPADNVSADSGRNPGSGV*
Ga0137335_10265262	3300012670	Soil	RARIGDDAKDGAGHMSYIAKPADKVSADSGRNPGAGI*
Ga0137318_10201681	3300012671	Soil	LRAKIGDDAKDGAGHIPNMAKPADKVSADFGRNPGAGV*
Ga0137341_10162822	3300012676	Soil	ARIGDDAKDGAGHIGHMAKPADKVNADSGRNPGAGI*
Ga0137341_10796712	3300012676	Soil	LRAKIGDDAKGGAGHIPNMAKPADKVSADFGRNPGARI*
Ga0075351_10385161	3300014318	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPRTGI*
Ga0075353_10434262	3300014321	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSNDCGRNPGAGI*
Ga0075352_10025851	3300014324	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSNDFGRNPGAGI*
Ga0075352_10633382	3300014324	Natural And Restored Wetlands	ALRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGTGI*
Ga0075352_11181202	3300014324	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGTGI*
Ga0180090_10092251	3300014866	Soil	TRALRAKIGDDAKDGAGHKSYMAKSADKVSGDFGRNPGSGI*
Ga0180088_10751241	3300014868	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSDDFGRNPGAGNGISNDHS
Ga0180087_10582121	3300014872	Soil	IGDDAKDGAGHIVNMAKPADKVSADFGRNPGTGI*
Ga0180066_10859922	3300014873	Soil	LRAKIGDDAKDGAGRIVNMAKPADKVSADFGRNPGAGI*
Ga0180066_10919522	3300014873	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSAGFGRNPGTGF*
Ga0180066_10925912	3300014873	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSADFSRNP*
Ga0180066_10972021	3300014873	Soil	LRAKIGDDAKDGAGHIGNMAKPADKVSADFGRNPGTGM*
Ga0180066_11351321	3300014873	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSAGFGRNPGAGF*
Ga0180083_11196012	3300014875	Soil	LRARIGDDAKDGAGHIEHMAKPADKVSADFGRNPGA
Ga0180064_10277251	3300014876	Soil	TRALRAKIGDDAKDGAGHMSYMAKPADKVSADSGRNPGAGI*
Ga0180065_10076231	3300014878	Soil	IGDDAKDGAGHMSYMAKPADKVSADSGRNPGAGI*
Ga0180065_10819361	3300014878	Soil	LRAKIGDDAKDGAGHMSYMAKSADKGSADFGRNPGAGI*
Ga0180062_10889551	3300014879	Soil	LRAKIGDDAKDGAGHIPNMAKPADKVSADFGRNPG
Ga0180104_10179463	3300014884	Soil	LRAKIGDDAKDGAGHIEHMAKPADKVSADSGRNPGAGIRIS
Ga0180075_10528581	3300015252	Soil	LRAKIGDDAKDGAGHIGNMAKPADKVSADFGRNPGAGI*
Ga0184634_101485272	3300018031	Groundwater Sediment	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGEGI
Ga0184634_103339942	3300018031	Groundwater Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSAGFGRNPGTGF
Ga0184634_105695432	3300018031	Groundwater Sediment	LRAKIGDDAKDGAGHMSYMAKLADKVSADFGRNPGAGI
Ga0184615_104812792	3300018059	Groundwater Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGTGI
Ga0184637_100435583	3300018063	Groundwater Sediment	LRAKIGDDAKDGAGHIANLAKPADKVSADFGRNPGIGI
Ga0184637_100776812	3300018063	Groundwater Sediment	LRAKIGDDAKDGAGHIAYMAKPADKVSADFGRNPGTGV
Ga0184637_101067952	3300018063	Groundwater Sediment	LRAKIGDDAKGGAGHIAYMAKPADKVSADFGRNPGTGI
Ga0184637_103174462	3300018063	Groundwater Sediment	LRAKIGDDAKDGAGHIVYMAKPADKVSADFGRNPGAGI
Ga0184637_104181982	3300018063	Groundwater Sediment	LRAKIGDDAKDGAGHIAYMAKPADKVSADFGRNPGTGI
Ga0184637_104699901	3300018063	Groundwater Sediment	LRAKIGDDAKGGAGHIAYMAKLADKVSADFGRNPGAGI
Ga0184637_105372842	3300018063	Groundwater Sediment	LRAKIGDDAKDGAGHIAYMAKPADKVSADFGRNPSTGI
Ga0184637_106446651	3300018063	Groundwater Sediment	RAKIGDDAKDGAGHIAYMAKPADKVSADFGRNPGTGI
Ga0184637_107546911	3300018063	Groundwater Sediment	TCALRAKIGDDAKDGAGHIAHMAKPADKVSADFGRNPGAGI
Ga0184633_100245226	3300018077	Groundwater Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSAGFGRNPGTGI
Ga0184633_101735961	3300018077	Groundwater Sediment	LRAKIGDDAKGGAGHIAYMAKPADKVSADFGRNPGT
Ga0184633_102741992	3300018077	Groundwater Sediment	LRAKIGDDAKDGAGHIVYMAKPADKVSAGFGRNPGTGV
Ga0184633_103445241	3300018077	Groundwater Sediment	LRAKIGDDAKAGAGHIVNMAKPADKVSADFGRNPGAGI
Ga0184633_105877222	3300018077	Groundwater Sediment	LRAKIGDDAKDGAGHIPNMAKPADKVSAGFGRNPGAGI
Ga0184627_106875562	3300018079	Groundwater Sediment	LRAKIGDDAKDGAGHIAHMAKPADKVSADFGRNPGAGI
Ga0184639_100269711	3300018082	Groundwater Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSAGFGRNPGA
Ga0184639_100280501	3300018082	Groundwater Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSAGFGRNPGTG
Ga0184639_103729212	3300018082	Groundwater Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPG
Ga0184639_105959722	3300018082	Groundwater Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSTDFGRNPGTGF
Ga0184628_104595751	3300018083	Groundwater Sediment	LRAKIGDDAKDGAGHIVNIAKPADKVSADFGRNPGAGI
Ga0190270_110779843	3300018469	Soil	LRAKIVDDAKDGAGHIRHMAKPADKVSDDFGRNPGA
Ga0187892_1000160336	3300019458	Bio-Ooze	LRAKIGDDAKDGAGHIQHMAKPADKVSADFGRNPGAGI
Ga0193717_11306861	3300020060	Soil	LRAKIGDDAKDGAGHIENMAKPADKVSADFGRNPGAGI
Ga0233392_10254922	3300024241	Deep Subsurface Sediment	LRAKIGDDAKDGAGHIVYMAKPADKVSADFGRNPGTGI
Ga0209398_11172451	3300025106	Groundwater	LRAKIGGDAKDGAGHMSYMAKPADKVSADFGRNPGAGI
Ga0209619_104280842	3300025159	Soil	LRAKIGDDAKDGAGHIVNMAKLADKVSADFGRNPGTDI
Ga0209109_100783313	3300025160	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSTDFGRNPGAGI
Ga0209640_108860111	3300025324	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGAGIGLSNGI
Ga0209341_110367802	3300025325	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSTDFGRNPGA
Ga0210071_10010764	3300025955	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSNDFGRNPGAGI
Ga0210089_10170861	3300025957	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIEHMAKPADKVSADFGRNPGAGI
Ga0210089_10426011	3300025957	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGAGI
Ga0210070_10012684	3300025962	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGAGF
Ga0210070_10358742	3300025962	Natural And Restored Wetlands	LRAKIGDDAKDGAGHMPYMAKPADKVNTDFGRNPGAGN
Ga0210145_10069372	3300025973	Natural And Restored Wetlands	NTRALRAKIGDDAKDGAGHIEHMAKPADKVSADFGRNPGAGI
Ga0210078_10010083	3300025979	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSNDFGRNPGEGI
Ga0210117_10048823	3300025985	Natural And Restored Wetlands	LRAKIGDDAKDGAGHIANMAKPADKVSNDFGRNPGTGI
Ga0209854_10966512	3300027384	Groundwater Sand	LRAKIGDDAKDGAGHIAYMAKPADKVSADFGRNPGAGI
Ga0208685_100012525	3300027513	Soil	LRAKIGDDAKDGAGHKSYMAKSADKVSGDFGRNPGAGI
Ga0208685_10001351	3300027513	Soil	LRARIGDDAKDGAGHIEHMAKPADKVSADFGRNPGAGI
Ga0208185_100041117	3300027533	Soil	LRAKIGDDAKDGAGHIPNMAKPADKVSADFGRNPGTGI
Ga0256865_10079864	3300027657	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGAGILNI
Ga0247825_101498873	3300028812	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSDDFGRNPGASI
Ga0307497_100351012	3300031226	Soil	LRAKIVDDAKDGAGHIRHMAKPADKVSDDFGRNPGAGI
Ga0214473_100389025	3300031949	Soil	LRAKIGDDAKDGTGHIPNMAKPADKVSAGFGRNPGAGI
Ga0214473_102121422	3300031949	Soil	LRAKIGDDAKDGAGHIPNMAKPAAKVSADFGRNPGAGI
Ga0326597_101631432	3300031965	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGAGI
Ga0326597_102116912	3300031965	Soil	LRAKIGDDAKDGAGHIANMAKPADKVSAGFGRNPGTGF
Ga0326597_106500071	3300031965	Soil	ARIGDDAKGGAAHIANMSKPTDKVSRNCGRNPIPHP
Ga0326597_112150022	3300031965	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGA
Ga0326597_118490132	3300031965	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSTGFGRNPGTGF
Ga0326597_119701182	3300031965	Soil	LRAKIGDDAKDGAGHIENMAKPADKVSADFGRNPGADI
Ga0335084_120462611	3300033004	Soil	AKIGDNAKDGAGHICYMAKPADNVSADFGRNPGAGA
Ga0334722_101391713	3300033233	Sediment	LRAKIGDDAKDGAGHIANMAKLADKVSADFGRNPCTGI
Ga0334722_111198393	3300033233	Sediment	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPSTDI
Ga0214472_101317954	3300033407	Soil	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGTGF
Ga0364930_0014363_228_344	3300033814	Sediment	LRAKIGDDAKDGAGHIVYMAKPADKVSAGFGRNPGTGF
Ga0364930_0033931_617_733	3300033814	Sediment	LRAKIGDDAKDGAGHIGNMAKPADKVSADFGRNPGTGM
Ga0364930_0320997_22_138	3300033814	Sediment	LRAKIGDDAKDGAGHIVYMAKPADKVSADFGRNPSTVI
Ga0364937_016037_99_215	3300034113	Sediment	LRAKIGDDAKDGAGHMSYMAKPADKVSADFGRNPGAGV
Ga0364937_096654_316_432	3300034113	Sediment	LRAKIGDDAKDGAGHIGNMAKPADKVSAGFGRNPGAGI
Ga0364938_012034_153_269	3300034114	Sediment	LRAKIGDDAKDGAGHIANMAKPADKVSAGFGRNPGTGI
Ga0364938_030687_698_814	3300034114	Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSADFGRNPGEGI
Ga0364938_073142_357_473	3300034114	Sediment	LRAKIGDDAKDGAGHMSYMAKPADKVNADFGRNPGAGT
Ga0364925_0059130_113_229	3300034147	Sediment	LRARIGDDAKDGAGHIPNMAKPADKVSADFGRNPGTGI
Ga0364932_0110615_144_260	3300034177	Sediment	LRAKIGDDAKDGAGHIVYMAKPADKVSADFGRNPGADI
Ga0364932_0276189_95_211	3300034177	Sediment	LRAKIGDDAKDGAGHIANMAKPADKVSAGFGRNPGTGV
Ga0364934_0025570_25_141	3300034178	Sediment	LRAKIGDDAKDGAGHIVNMAKPADKVSAGFGRNPGAGF
Ga0364923_0023174_1266_1382	3300034690	Sediment	LRAKIGDDAKDGAGHIANMAKPADKVSADFGRNPGATI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F032873

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences