NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F032803

Metagenome / Metatranscriptome Family F032803

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F032803
Family Type Metagenome / Metatranscriptome
Number of Sequences 179
Average Sequence Length 65 residues
Representative Sequence MGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMK
Number of Associated Samples 141
Number of Associated Scaffolds 179

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 98.32 %
% of genes from short scaffolds (< 2000 bps) 93.85 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(8.380 % of family members)
Environment Ontology (ENVO) Unclassified
(50.838 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(65.922 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.60%    β-sheet: 0.00%    Coil/Unstructured: 73.40%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 179 Family Scaffolds
PF08281Sigma70_r4_2 93.85
PF05193Peptidase_M16_C 2.23
PF00675Peptidase_M16 1.12
PF12911OppC_N 0.56
PF01053Cys_Met_Meta_PP 0.56
PF01578Cytochrom_C_asm 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 179 Family Scaffolds
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 0.56
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.56
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.56
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.56
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.56
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.56
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 0.56
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 0.56
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 0.56
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.56
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 0.56

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101941045All Organisms → cellular organisms → Bacteria → Acidobacteria732Open in IMG/M
3300000559|F14TC_101513517All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300000955|JGI1027J12803_106124532All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300000956|JGI10216J12902_109206064All Organisms → cellular organisms → Bacteria → Acidobacteria956Open in IMG/M
3300000956|JGI10216J12902_113791114All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300001431|F14TB_101405851All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300001431|F14TB_103853899All Organisms → cellular organisms → Bacteria → Acidobacteria870Open in IMG/M
3300003319|soilL2_10080240All Organisms → cellular organisms → Bacteria → Acidobacteria3482Open in IMG/M
3300003321|soilH1_10374908All Organisms → cellular organisms → Bacteria → Acidobacteria1056Open in IMG/M
3300003999|Ga0055469_10293573All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300004016|Ga0058689_10164160All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300004156|Ga0062589_100430812All Organisms → cellular organisms → Bacteria → Acidobacteria1084Open in IMG/M
3300004156|Ga0062589_101892459All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300004268|Ga0066398_10219326All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300004480|Ga0062592_100507431All Organisms → cellular organisms → Bacteria → Acidobacteria998Open in IMG/M
3300004643|Ga0062591_102110227All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300004803|Ga0058862_10074451All Organisms → cellular organisms → Bacteria → Acidobacteria953Open in IMG/M
3300005093|Ga0062594_100291876All Organisms → cellular organisms → Bacteria → Acidobacteria1232Open in IMG/M
3300005294|Ga0065705_10736513All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300005329|Ga0070683_101671548All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300005330|Ga0070690_100654168All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300005331|Ga0070670_100000829All Organisms → cellular organisms → Bacteria24166Open in IMG/M
3300005333|Ga0070677_10213835All Organisms → cellular organisms → Bacteria → Acidobacteria938Open in IMG/M
3300005333|Ga0070677_10863780All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300005334|Ga0068869_100365052All Organisms → cellular organisms → Bacteria → Acidobacteria1180Open in IMG/M
3300005334|Ga0068869_100664941All Organisms → cellular organisms → Bacteria → Acidobacteria885Open in IMG/M
3300005336|Ga0070680_101303294All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300005344|Ga0070661_100943572All Organisms → cellular organisms → Bacteria → Proteobacteria714Open in IMG/M
3300005345|Ga0070692_10845046All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300005345|Ga0070692_11032769All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300005354|Ga0070675_101565444All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300005356|Ga0070674_100081414All Organisms → cellular organisms → Bacteria → Acidobacteria2314Open in IMG/M
3300005356|Ga0070674_100785301All Organisms → cellular organisms → Bacteria → Acidobacteria821Open in IMG/M
3300005364|Ga0070673_101977142All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300005366|Ga0070659_100871552All Organisms → cellular organisms → Bacteria → Acidobacteria786Open in IMG/M
3300005367|Ga0070667_102030737All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300005438|Ga0070701_10893836All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300005440|Ga0070705_101301236All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300005445|Ga0070708_101679116All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300005445|Ga0070708_102204989All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300005455|Ga0070663_101187248All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300005455|Ga0070663_101781179All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300005457|Ga0070662_101184134All Organisms → cellular organisms → Bacteria → Acidobacteria657Open in IMG/M
3300005459|Ga0068867_100959398All Organisms → cellular organisms → Bacteria → Acidobacteria773Open in IMG/M
3300005459|Ga0068867_101601940All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300005471|Ga0070698_101023032All Organisms → cellular organisms → Bacteria → Acidobacteria774Open in IMG/M
3300005518|Ga0070699_100782929All Organisms → cellular organisms → Bacteria → Acidobacteria873Open in IMG/M
3300005543|Ga0070672_101331184All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300005545|Ga0070695_101157527All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300005547|Ga0070693_100756198All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300005564|Ga0070664_101461064All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300005615|Ga0070702_100653429All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300005616|Ga0068852_100390552All Organisms → cellular organisms → Bacteria → Proteobacteria1367Open in IMG/M
3300005617|Ga0068859_100255386All Organisms → cellular organisms → Bacteria → Acidobacteria1843Open in IMG/M
3300005617|Ga0068859_100948636All Organisms → cellular organisms → Bacteria → Acidobacteria944Open in IMG/M
3300005618|Ga0068864_100515055All Organisms → cellular organisms → Bacteria → Acidobacteria1152Open in IMG/M
3300005618|Ga0068864_101002031All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300005618|Ga0068864_101621944All Organisms → cellular organisms → Bacteria → Acidobacteria651Open in IMG/M
3300005719|Ga0068861_100286038All Organisms → cellular organisms → Bacteria → Proteobacteria1422Open in IMG/M
3300005719|Ga0068861_102481980All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300005840|Ga0068870_10702704All Organisms → cellular organisms → Bacteria → Acidobacteria698Open in IMG/M
3300005842|Ga0068858_100881393All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300005843|Ga0068860_100419849All Organisms → cellular organisms → Bacteria → Acidobacteria1326Open in IMG/M
3300005843|Ga0068860_101522543All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300006169|Ga0082029_1688106All Organisms → cellular organisms → Bacteria1915Open in IMG/M
3300006237|Ga0097621_100489823All Organisms → cellular organisms → Bacteria → Acidobacteria1112Open in IMG/M
3300006237|Ga0097621_101870175All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300006358|Ga0068871_102029079All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300006755|Ga0079222_11679273All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300006806|Ga0079220_10563253All Organisms → cellular organisms → Bacteria → Acidobacteria799Open in IMG/M
3300006844|Ga0075428_102543999All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300006845|Ga0075421_102392553All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300006852|Ga0075433_10466576All Organisms → cellular organisms → Bacteria → Acidobacteria1112Open in IMG/M
3300006854|Ga0075425_102270726All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300006969|Ga0075419_10082487All Organisms → cellular organisms → Bacteria2049Open in IMG/M
3300007076|Ga0075435_101507005All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300009100|Ga0075418_13094483All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300009148|Ga0105243_10648380All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1023Open in IMG/M
3300009162|Ga0075423_10766048All Organisms → cellular organisms → Bacteria → Acidobacteria1021Open in IMG/M
3300009176|Ga0105242_10283447All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1506Open in IMG/M
3300009176|Ga0105242_10922623All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300009176|Ga0105242_11051129All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300009177|Ga0105248_10011370All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes9809Open in IMG/M
3300009789|Ga0126307_10489698All Organisms → cellular organisms → Bacteria → Acidobacteria992Open in IMG/M
3300009789|Ga0126307_10864008All Organisms → cellular organisms → Bacteria → Acidobacteria730Open in IMG/M
3300010041|Ga0126312_11021190All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300010045|Ga0126311_11621781All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300010137|Ga0126323_1008615All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300010359|Ga0126376_10040726All Organisms → cellular organisms → Bacteria → Acidobacteria3226Open in IMG/M
3300010373|Ga0134128_12208363All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300010375|Ga0105239_10876870All Organisms → cellular organisms → Bacteria → Acidobacteria1030Open in IMG/M
3300010375|Ga0105239_11749289All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300010397|Ga0134124_10215319All Organisms → cellular organisms → Bacteria1751Open in IMG/M
3300010397|Ga0134124_11857845All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300010399|Ga0134127_12029785All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300010399|Ga0134127_13123582All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300010400|Ga0134122_10674850All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300010400|Ga0134122_11347555All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300010400|Ga0134122_12313305All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300010401|Ga0134121_10085758All Organisms → cellular organisms → Bacteria → Acidobacteria2625Open in IMG/M
3300011000|Ga0138513_100046739All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300011332|Ga0126317_10849070All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300012200|Ga0137382_10515048All Organisms → cellular organisms → Bacteria → Acidobacteria850Open in IMG/M
3300012212|Ga0150985_106201014All Organisms → cellular organisms → Bacteria → Acidobacteria991Open in IMG/M
3300012212|Ga0150985_121162160All Organisms → cellular organisms → Bacteria → Acidobacteria838Open in IMG/M
3300012285|Ga0137370_10188748All Organisms → cellular organisms → Bacteria → Acidobacteria1206Open in IMG/M
3300012469|Ga0150984_104112595All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300012885|Ga0157287_1094417All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300012891|Ga0157305_10223600All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300012905|Ga0157296_10294130All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300012911|Ga0157301_10445602All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300012948|Ga0126375_10530298All Organisms → cellular organisms → Bacteria → Acidobacteria884Open in IMG/M
3300012951|Ga0164300_10165580All Organisms → cellular organisms → Bacteria → Acidobacteria1051Open in IMG/M
3300012957|Ga0164303_10210617All Organisms → cellular organisms → Bacteria → Acidobacteria1084Open in IMG/M
3300012958|Ga0164299_10382522All Organisms → cellular organisms → Bacteria → Acidobacteria898Open in IMG/M
3300012960|Ga0164301_11746562All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300012986|Ga0164304_10073761All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1948Open in IMG/M
3300013102|Ga0157371_11574463All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300013296|Ga0157374_12440824All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300013297|Ga0157378_10024453All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes5316Open in IMG/M
3300013306|Ga0163162_10361478All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300013307|Ga0157372_12169558All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300013308|Ga0157375_10687014All Organisms → cellular organisms → Bacteria → Acidobacteria1178Open in IMG/M
3300013308|Ga0157375_11362921All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300013308|Ga0157375_11905072All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300014325|Ga0163163_10554156All Organisms → cellular organisms → Bacteria → Acidobacteria1212Open in IMG/M
3300014326|Ga0157380_10576109All Organisms → cellular organisms → Bacteria → Acidobacteria1109Open in IMG/M
3300014745|Ga0157377_10729425All Organisms → cellular organisms → Bacteria → Acidobacteria723Open in IMG/M
3300014969|Ga0157376_11481690All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300015054|Ga0137420_1496390All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes2948Open in IMG/M
3300015371|Ga0132258_11455271All Organisms → cellular organisms → Bacteria1730Open in IMG/M
3300015372|Ga0132256_101492385All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300015372|Ga0132256_102327046All Organisms → cellular organisms → Bacteria → Acidobacteria639Open in IMG/M
3300015372|Ga0132256_103041500All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300018466|Ga0190268_10084448All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300018466|Ga0190268_11120602All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300018476|Ga0190274_10612022All Organisms → cellular organisms → Bacteria → Acidobacteria1118Open in IMG/M
3300018476|Ga0190274_13052671All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300019361|Ga0173482_10515037All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300020063|Ga0180118_1025536All Organisms → cellular organisms → Bacteria → Acidobacteria821Open in IMG/M
3300024325|Ga0247678_1034730All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300025904|Ga0207647_10498248All Organisms → cellular organisms → Bacteria → Acidobacteria679Open in IMG/M
3300025907|Ga0207645_11178660All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300025913|Ga0207695_11091539All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300025918|Ga0207662_10898005All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300025918|Ga0207662_11344848All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300025920|Ga0207649_11152508All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300025923|Ga0207681_10366304All Organisms → cellular organisms → Bacteria → Acidobacteria1157Open in IMG/M
3300025925|Ga0207650_10043887All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia3284Open in IMG/M
3300025926|Ga0207659_10178183All Organisms → cellular organisms → Bacteria → Acidobacteria1682Open in IMG/M
3300025932|Ga0207690_11073859All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300025938|Ga0207704_11367527All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300025945|Ga0207679_10232401All Organisms → cellular organisms → Bacteria → Acidobacteria1558Open in IMG/M
3300025945|Ga0207679_10737077All Organisms → cellular organisms → Bacteria → Acidobacteria896Open in IMG/M
3300025960|Ga0207651_11036717All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300025960|Ga0207651_11582877All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300025986|Ga0207658_11542471All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300026035|Ga0207703_11385376All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300026075|Ga0207708_10242478All Organisms → cellular organisms → Bacteria1450Open in IMG/M
3300026089|Ga0207648_10145923All Organisms → cellular organisms → Bacteria → Acidobacteria2087Open in IMG/M
3300026089|Ga0207648_10986501All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300026089|Ga0207648_11852720All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300026095|Ga0207676_10608489All Organisms → cellular organisms → Bacteria → Acidobacteria1050Open in IMG/M
3300026142|Ga0207698_10608220All Organisms → cellular organisms → Bacteria → Acidobacteria1078Open in IMG/M
3300026142|Ga0207698_11871624All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300026142|Ga0207698_12086268All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300026557|Ga0179587_10647208All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300027743|Ga0209593_10269682All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300027846|Ga0209180_10488967All Organisms → cellular organisms → Bacteria → Acidobacteria690Open in IMG/M
3300030511|Ga0268241_10188868All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300030905|Ga0308200_1139703All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300031538|Ga0310888_10482826All Organisms → cellular organisms → Bacteria → Acidobacteria739Open in IMG/M
3300031720|Ga0307469_11499330All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300031908|Ga0310900_10564008All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300032002|Ga0307416_101460773All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300032003|Ga0310897_10317577All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300032211|Ga0310896_10183084All Organisms → cellular organisms → Bacteria → Acidobacteria1018Open in IMG/M
3300034817|Ga0373948_0134941All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300034818|Ga0373950_0137736All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.38%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.59%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.03%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.47%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.47%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.47%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.91%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.79%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.23%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.12%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.12%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.12%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.12%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.12%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.12%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.12%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.12%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.56%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.56%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.56%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.56%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.56%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.56%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.56%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.56%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010137Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011000Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012885Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1EnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020063Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024325Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10194104523300000364SoilMSVQPEDEFVSDNELKSLLERWVAPQPSRVLDKRIETSYAREFSGADRLSQSVLLPHRREEVVS
F14TC_10151351713300000559SoilMGVGPEDEFASDDQLKTLLERWTAPAPSRVLDQRIATSFNRGFSGADGLSQSVLLPQRREEVVLMKFCTRCEEEFADKF
JGI1027J12803_10612453223300000955SoilMGVEPEEEFVSDDQLKTLLERWIAPDPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVLMKFCTRCEE
JGI10216J12902_10920606433300000956SoilMGVEPEDGFVSDDELKSLLDRWVVPGPSRVLDQRIENSFASEFSGADRLSQSV
JGI10216J12902_11379111423300000956SoilMSVGPEDEFASDDQLKSLLGRWNAPGPSRVLDKRIATSFNREFSGADGLSQS
F14TB_10140585113300001431SoilMSSTEREELVPDDELNALLERWIAPGPSRVLDKRVATSFTREFSGAEGLSRSSLLPQTRE
F14TB_10385389923300001431SoilMSRVERDEEFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLPQSMPLPQTREE
soilL2_1008024053300003319Sugarcane Root And Bulk SoilMGVEPEEELISDNELKSMLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVL
soilH1_1037490813300003321Sugarcane Root And Bulk SoilMSRIEPEEEFIDDELKPLLQRWIAPGPSRVLDKRIATSFAREFSGAASLLPQTGEEVVTMKFCARCEEEFA
Ga0055469_1029357323300003999Natural And Restored WetlandsMGVEPEDGFVSDDELKSLLERWVVPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVSMKFCSV
Ga0058689_1016416023300004016AgaveMGVQPEDEFVSDDELKSLLERWVAPGPSRVLDKRIKTSFAREFSGAEEVVLMKFCSVCKEEFADKFS
Ga0062589_10043081223300004156SoilMSRVEREEEFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLPQSMPLPQTREEVVTMKFCTRCEEEFAD
Ga0062589_10189245913300004156SoilMGSEPEDGFVSDDELKSLLKRWNAPGPSRVLDKRIETSFAREFSGADGLSQSVLL
Ga0066398_1021932613300004268Tropical Forest SoilMGAEPLEEFAPDDELRQLLQSWTAPGPSGFLDKRISSSYAREFSGGDGLSQPIQLPQRREEVVPMKF
Ga0062592_10050743113300004480SoilMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLL
Ga0062591_10211022723300004643SoilMSRVERGEEFLSEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKF
Ga0058862_1007445113300004803Host-AssociatedMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMK
Ga0062594_10029187613300005093SoilMGVEPEEEFVSDDQLKTLLERWIAPDPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVLMKFC
Ga0065705_1073651313300005294Switchgrass RhizosphereMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSV
Ga0070683_10167154813300005329Corn RhizosphereMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIETSFKREFLGADRLPESVLLPHGREEVVSM
Ga0070690_10065416813300005330Switchgrass RhizosphereMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIETSFKREFLGADRLPESVLLPHGREEVV
Ga0070670_100000829263300005331Switchgrass RhizosphereMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPH
Ga0070677_1021383523300005333Miscanthus RhizosphereMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLP
Ga0070677_1086378023300005333Miscanthus RhizosphereMGVEPENEFVSDDELKSFLERWVSPGPSRFLDKRIETSFQQEFSGANGMSQPVLLPQRREEVVLMKFC
Ga0068869_10036505213300005334Miscanthus RhizosphereMSRVERGEEFLSEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKFC
Ga0068869_10066494113300005334Miscanthus RhizosphereMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFCSV
Ga0070680_10130329423300005336Corn RhizosphereMSRVEREEEFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLPQSMPLPQTREEVVTMKFCTRCEEEFA
Ga0070661_10094357213300005344Corn RhizosphereMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRIATSFNREFSGADGLSQSVLLP
Ga0070692_1084504623300005345Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFVSDDELSSLLGRWVAPGPSRVLDKRIQTSFAREFSGAEEVVLMKFCSVCKEEFADKFS
Ga0070692_1103276923300005345Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFISDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHR
Ga0070675_10156544423300005354Miscanthus RhizosphereMSRVERGEEFLSEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKFCTRCEEEFA
Ga0070674_10008141413300005356Miscanthus RhizosphereMGVEPEEEFVSDDQLKTLLERWIAPDPSRVLDKRITTSFQREFSGADGLSQSVLLPQRREEVVLMKFCTRCEEEFADKFSFC
Ga0070674_10078530123300005356Miscanthus RhizosphereMSRVERGEEFLSEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKFCTRCEE
Ga0070673_10197714213300005364Switchgrass RhizosphereMSRVERDEDFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLSQSMPLPQT
Ga0070659_10087155223300005366Corn RhizosphereMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIETSFKREFSGADSLGEPVLLPHSRDEVVSMKFCSKCEE
Ga0070667_10203073723300005367Switchgrass RhizosphereMGVEPEDEFVSKDELKSLLERWSAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPHRREEVVLMKFC
Ga0070701_1089383613300005438Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFTREFSGADGLSQSVLLPHRREEVVSMK
Ga0070705_10130123623300005440Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFVSDDELSSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFCS
Ga0070708_10167911613300005445Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFVSDEELKSLLKRWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVSMKF
Ga0070708_10220498923300005445Corn, Switchgrass And Miscanthus RhizosphereMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVS
Ga0070663_10118724813300005455Corn RhizosphereMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIETSFKREFLGADRLPESVLLPHGREEV
Ga0070663_10178117913300005455Corn RhizosphereMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLP
Ga0070662_10118413423300005457Corn RhizosphereMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPHRREEVVLMKFCTRCEEEF
Ga0068867_10095939813300005459Miscanthus RhizosphereMSRVERGEEFLSEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKFCTR
Ga0068867_10160194013300005459Miscanthus RhizosphereMGVQPEDEFISDDELKSLLERWVAPGPSRVLDKRVETSFAREFSGADGLSQSVLLPHRQ
Ga0070698_10102303213300005471Corn, Switchgrass And Miscanthus RhizosphereMGVRPEDEFVPDNELRSLLENWNAPEPSRVLDKRIITSFQREFSGADGLSKSVLLPQRREEVVLMKFCTRCEEE
Ga0070699_10078292913300005518Corn, Switchgrass And Miscanthus RhizosphereMGVEPEDGFISDEELKSMLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVSMKFC
Ga0070672_10133118423300005543Miscanthus RhizosphereMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSV
Ga0070695_10115752713300005545Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFVSDDQLKTLLERWIAPDPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVLMKFCTRCEEE
Ga0070693_10075619823300005547Corn, Switchgrass And Miscanthus RhizosphereMGVEPEDEFDSEDQLKSLLDRWIVPEPSRVLDKRIATSFQREVTGADGLSQSVLLPQRREEVVLMKFCTRCEE
Ga0070664_10146106413300005564Corn RhizosphereMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRIANSFAREFSGADGLSQSVLL
Ga0070702_10065342913300005615Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFISDDELKSLLERWVAPGPSRVLDKRMETSFAREFSGADGLSQSVLLPHRREEVVSM
Ga0068852_10039055213300005616Corn RhizosphereMGVRPEDEFVPDDELRSLLETWNAPEPSRVLDKRIITSFQREFSGADGLSKSVLLPQRREEVVLMKFCTRCEEE
Ga0068859_10025538633300005617Switchgrass RhizosphereMGVEPEEEFVSDDQLKTLLERWIAPDPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVLMKFCSR
Ga0068859_10094863623300005617Switchgrass RhizosphereMGVEPEDDFVSDDELKKLLERWVAPGPSRVLDNRIETSFISEFSGADRLSQSVLLPHRREEVVSMK
Ga0068864_10051505523300005618Switchgrass RhizosphereMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSMKFC
Ga0068864_10100203113300005618Switchgrass RhizosphereMGVEPEEEFVSDEELKSLLKRWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLP
Ga0068864_10162194413300005618Switchgrass RhizosphereMGVRPEDEFVPDHELRSLLETWNAPEPSRVLDKRIITSFQREFSGADGLSKSVLLPQRREEVVLMKCCTRCEEEFA*
Ga0068861_10028603833300005719Switchgrass RhizosphereMSRVERDEDFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLSQSMPLPQTREEVVTMKFC
Ga0068861_10248198023300005719Switchgrass RhizosphereMSVEPEEEFVSDDELKSLLKRWVAPGPSRVLDKRIETSFAREFSGAEEVVLMKFCSVCKEEFADKFS
Ga0068870_1070270413300005840Miscanthus RhizosphereMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRIANSYAREFSGADGLSQSVLLPHRREEVVSMKFC
Ga0068858_10088139313300005842Switchgrass RhizosphereMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIETSFKREFSGADRLPEPVLLPHSRE
Ga0068860_10041984913300005843Switchgrass RhizosphereMSVGPEGDFASDDQLKTLLERWTAPSPSRVLDKRIATSFNREFSGADGLSQSVLLP
Ga0068860_10152254323300005843Switchgrass RhizosphereMSVRPEDEFVSDNELKSLLKRWDAPEPSRVLDERIKTSFAREFSGADGLSQSVLLP
Ga0082029_168810633300006169Termite NestMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSM
Ga0097621_10048982313300006237Miscanthus RhizosphereMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPQRREEVVLM
Ga0097621_10187017523300006237Miscanthus RhizosphereMSVRPEDEFVSDNELKSLLKRWDAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRR
Ga0068871_10202907913300006358Miscanthus RhizosphereMAFEPEDEFVSDDELKTLLERWIVPGPSRVLDKRIATSFTREFSGADGLSQSVLLPHRREEVVLMKFC
Ga0079222_1167927323300006755Agricultural SoilMSVQPEDEFVSDDELKSLLKRWVAPEPSRVLDQRIKTSFAREFSGADGLSQSVLLP
Ga0079220_1056325323300006806Agricultural SoilMGIEPEEEFISDNELKSLLDRWVAPGPSRVLDKRIETSFIREFSGADGLSQSVLLP
Ga0075428_10254399923300006844Populus RhizosphereMGDKPEEEFVSDDQLKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVSMKFCS
Ga0075421_10239255313300006845Populus RhizosphereMGVEPEDEFVSEGQLKSLLDRWIVPEPSRVLDKRIATSFQREVKGADGLSQSVLLPQRREEVVLMKFCTRCEEEFADK
Ga0075433_1046657613300006852Populus RhizosphereMGVRPEDEFVPDNELRSLLENWNAPEPSRVLDKRIITSFQREFSGADGLSKSVLLPQRREEVVLMKFCTR
Ga0075425_10227072623300006854Populus RhizosphereMGVRPEDEFVPDDELRSLLETWNAPEPSRVLDKRIITSFQREFSGADGLSKSVLLPQRREEVVLMKFCTRCEEEFA
Ga0075419_1008248713300006969Populus RhizosphereMGDEPEDKFNSDHELKALLERWTTAGPSRILDKRIETSFLREFSGADGRSPALHSLRPDEVVSMKFCSK
Ga0075435_10150700523300007076Populus RhizosphereMGVEPEDEFVSDDQLKTLLDRWIAPDPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVLMKFCTRCEEE
Ga0075418_1309448323300009100Populus RhizosphereMGDKPEEEFVSDDQLKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVS
Ga0105243_1064838023300009148Miscanthus RhizosphereMSVQPEDEFVSDNELRSLLKRWVAPEPSRVLDERIKTSLAREFSGAAGLSPTVMLP*
Ga0075423_1076604823300009162Populus RhizosphereMGVEPEESFVSDGELKSLLERWVAPGPSGVLDKRIETSFAREFSGADRLSQSVLLP
Ga0105242_1028344733300009176Miscanthus RhizosphereMSSVEREEEFLPEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKFCTRCEE
Ga0105242_1092262323300009176Miscanthus RhizosphereMSRVERDEDFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLPQSMPLPQTREEV
Ga0105242_1105112913300009176Miscanthus RhizosphereMGVRPEDEFVPDDELRSLLETWNAPEPSRVLDKRIITSFQREFSGADGLSKSVLLPQRREEVVLMKFCTRCEEEFAEKFS
Ga0105248_1001137013300009177Switchgrass RhizosphereMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRIATSFAREFSGADGLSQSVLLPHRREEVVSMKFCSR
Ga0126307_1048969823300009789Serpentine SoilMSVQPEDASDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREE
Ga0126307_1086400813300009789Serpentine SoilMGVEPEEELVSDNELKSLLERWIAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFCSV
Ga0126312_1102119013300010041Serpentine SoilMGVEPEEEFVSDNELKSLLERWVTPRPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMK
Ga0126311_1162178113300010045Serpentine SoilMGVEPEESFVSDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQPVLLSHRREVVSMKF
Ga0126323_100861513300010137SoilMGVEPEEEFVSDDELKSLLARWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVSMKFC
Ga0126376_1004072653300010359Tropical Forest SoilMGVEPEEEFVSDNELRSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVS
Ga0134128_1220836323300010373Terrestrial SoilMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPHRRE
Ga0105239_1087687013300010375Corn RhizosphereMGIEPEEEFISDNELKSLLDRWVAPGPSRVLDKRIETSFIREFSGADGLSQSVLLPHRREEVVSMKFCS
Ga0105239_1174928913300010375Corn RhizosphereMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRIANSYAREFSGADGLSQSV
Ga0134124_1021531933300010397Terrestrial SoilMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRIATSFAREFSGADGLSQSVLL
Ga0134124_1185784523300010397Terrestrial SoilMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRIANSFAREFSGADGLSQSVLLPHRRE
Ga0134127_1202978513300010399Terrestrial SoilMSRVERDEDFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLSQSMPLPQTREEVVTMK
Ga0134127_1312358213300010399Terrestrial SoilMAFEPEDEFVSDDELKTLLERWIVPGPSRVLDKRIATSFTREFSGADGLSQSVLLPHRREEVVLMKFCTRCEEEFAEK
Ga0134122_1067485013300010400Terrestrial SoilMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRIATSFAREFSGADGLSQSVLLPHRR
Ga0134122_1134755523300010400Terrestrial SoilMGVEREEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLP
Ga0134122_1231330513300010400Terrestrial SoilMGVEREEEFVSDNELKSLLERWVAPGPSGVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKF
Ga0134121_1008575813300010401Terrestrial SoilMGVEREEEFVSDNELKSLLERWVAPGPSGVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFCS
Ga0138513_10004673913300011000SoilMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIKTSFKREFSGADSLAEPVLLPHSRE
Ga0126317_1084907013300011332SoilMGVEPEEEFVSDNELKSLLERWVAPVPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMK
Ga0137382_1051504823300012200Vadose Zone SoilMGSAESEEFVSEEELKTLLERWMAPGPSRVLDKRIATSFAREFSGADGLSQPELLPHRRE
Ga0150985_10620101413300012212Avena Fatua RhizosphereMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSMKFCS
Ga0150985_12116216013300012212Avena Fatua RhizosphereMSGEPEKEFASEHELKSLLERWVAPGPSRVLDKRIATSFQQEFSGADGLSQSVLLPQRREEVVLMKFCTRCE
Ga0137370_1018874813300012285Vadose Zone SoilMSSVEPGEEFISEDELKPLLEAWIAPGPSRVLDKRIATSFSREFSGADRLSQPVLLPHRREEGISMKFCSKCEEE
Ga0150984_10411259513300012469Avena Fatua RhizosphereMGVEPENEFVSDDELKSLLERWNAPGPSRVLDKRVANSFAREFSGADGLSQSVLLPHRRE
Ga0157287_109441723300012885SoilMSVEPEEEFNSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVSMKFCSVCE
Ga0157305_1022360013300012891SoilMSVEPEEGFISDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFC
Ga0157296_1029413023300012905SoilMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRVETSFAREFSGADGLSQSVLLPHRQTEV
Ga0157301_1044560213300012911SoilMSVQPEDEFVSDDELKSLLERWVAPQPSRVLDKRIETSYAREFSGADRLSQSVLLPHRREEV
Ga0126375_1053029823300012948Tropical Forest SoilMGVQPEDEIISDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFCSVC
Ga0164300_1016558013300012951SoilMSRVEREEEFLSEDELKALLESWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKFCTRC
Ga0164303_1021061713300012957SoilMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRIATSFNREFSGADGLSQSVL
Ga0164299_1038252223300012958SoilMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVV
Ga0164301_1174656213300012960SoilMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRRE
Ga0164304_1007376133300012986SoilMSVQPEDEFVSDDELKSLLKRWVTPEPSRVLDERIKTSFAREFSGADGLSQSVLL
Ga0157371_1157446323300013102Corn RhizosphereMGVEPEDKYDSEDELKALLERWTTPGPSRVLDKRIETSFAREFSGADGILNPGLLSLRREEVASMKFCSKCEE
Ga0157374_1244082423300013296Miscanthus RhizosphereMGVEPENELVSDDELKSVLERWNAPGPSRVLDKRIANSFAREFSGADGLSQSVLLPHRREEVVSMKFC
Ga0157378_1002445313300013297Miscanthus RhizosphereMSRVEREEEFLSEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTRE
Ga0163162_1036147813300013306Switchgrass RhizosphereMGVEPEDDFVSDDELKKLLERWVAPGPSRVLDNRIETSFISEFSGADRLSQSVLLPHRREEVVSMKFCSVC
Ga0157372_1216955823300013307Corn RhizosphereMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPH
Ga0157375_1068701433300013308Miscanthus RhizosphereMGVEPEDEFVSKDELKSLLERWSAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPHRREEVVLMKFCTRCEEEFAEKF
Ga0157375_1136292123300013308Miscanthus RhizosphereMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVS
Ga0157375_1190507223300013308Miscanthus RhizosphereMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIETSFKREFSGADSLGEPVLL
Ga0163163_1055415633300014325Switchgrass RhizosphereMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPH
Ga0157380_1057610923300014326Switchgrass RhizosphereMSVQPEDEFVSDNELRSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSMKFCSVC
Ga0157377_1072942523300014745Miscanthus RhizosphereMGVQPEDEFVSDDELKSLLERWVAPGPSRVLDKRVETSFAREFSGADRLSQSVLLPHRQQEV
Ga0157376_1148169023300014969Miscanthus RhizosphereMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPQRRE
Ga0137420_149639043300015054Vadose Zone SoilMNGAGPGEEFISDDELKTLLESWIAPGPSRVLDERIANKLSREFSGADGLSQPELLPIGEKR*
Ga0132258_1145527133300015371Arabidopsis RhizosphereMGVEPEEGFVSDDELSSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRRE
Ga0132256_10149238513300015372Arabidopsis RhizosphereMMGVEPESEFVSDDELKSLLERWNAPGPSRVLDKRIATSFAREFSGADGLSQSVLLPHRREEV
Ga0132256_10232704623300015372Arabidopsis RhizosphereMGVEPENEFVSDDELKSLLERWNVPGPSRVLDKRIATSFAREFSGADGLSQSVLLPHRREEVV
Ga0132256_10304150013300015372Arabidopsis RhizosphereMGVEPEEEFISDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRRE
Ga0190268_1008444813300018466SoilMGVEPEDEFVSDDELKSLLDRWVVPGPSRVLDERIETSFTREFSGADRLSQSVLLPRREEVVSMKF
Ga0190268_1112060213300018466SoilMGVEPEKELVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHR
Ga0190274_1061202223300018476SoilMGVEPENEFVSDGELKSLLERWVAPGPSRVLDKRIATSFQQEVSGADGLSQSVLLPQRREEVVLMKFCTRCE
Ga0190274_1305267113300018476SoilMSVQPEDEFVSDDELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSMKFCS
Ga0173482_1051503723300019361SoilMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIANSFAREFSGADGLSQSVLLPHRREEVVSMKFCS
Ga0180118_102553623300020063Groundwater SedimentMGSNEPGEEFVSEDQLKTLLERWIAPGPSRVLDKRVATSFAREFSGAGNLSEATLLPQTREEVVTMKFCSRC
Ga0247678_103473023300024325SoilMGVEPENEFVSDDELKSLLERWNVPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFCSR
Ga0207647_1049824823300025904Corn RhizosphereMGVEPEEEFVSEDELKTLLERWIAPGPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVLMKF
Ga0207645_1117866023300025907Miscanthus RhizosphereMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRITTSFQREFSGADGLSQSVLLPHRREEVVLMKFCTRCEEEFADK
Ga0207695_1109153923300025913Corn RhizosphereMGVEPEEEFVSDEELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRRE
Ga0207662_1089800523300025918Switchgrass RhizosphereMSRVERDEDFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLSQSMPLPQTREEVVTMKFCTRCEEEFADKFSF
Ga0207662_1134484813300025918Switchgrass RhizosphereMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMK
Ga0207649_1115250813300025920Corn RhizosphereMGVQPEDELISDDELKSLLERWVAPGPSRVLDKRVETSFAREFSGADGLSQSVL
Ga0207681_1036630433300025923Switchgrass RhizosphereMGVQPEDEFISDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRQQ
Ga0207650_1004388743300025925Switchgrass RhizosphereMGVQPEDELISDDELKSLLERWVAPGPSRVLDKRVETSFAREFSGADGLSQSVLLPHRQQEVVSMKF
Ga0207659_1017818313300025926Miscanthus RhizosphereMSVGPEGDFASDDQLKTLLERWTAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPQRREEVVLMKF
Ga0207690_1107385913300025932Corn RhizosphereMGVEPEEEFVSDEELKSLLKRWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEV
Ga0207704_1136752713300025938Miscanthus RhizosphereMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGAGGLSQSVLLPHRRE
Ga0207679_1023240113300025945Corn RhizosphereMGVEREEEFVSDNELKSLLERWVAPGPSGVLDKRIETSFAREFSGADGLSQSV
Ga0207679_1073707723300025945Corn RhizosphereMSVQPEDEFVSDNELKSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSMKFCSVC
Ga0207651_1103671723300025960Switchgrass RhizosphereMGVEPEEEFVSDDELSSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRRE
Ga0207651_1158287713300025960Switchgrass RhizosphereMSRVERDEDFVSEDDLKALLERWIAPGPSKLLDKRIETSFAREFSGAAGLSQSMPLPQTREEVVTMKFCT
Ga0207658_1154247113300025986Switchgrass RhizosphereMGVEPEDEFVSKDELKSLLERWSAPGPSRVLDKRIATSFNREFSGADGLSQSVLLPHRREEVVLMKFCTR
Ga0207703_1138537613300026035Switchgrass RhizosphereMSVQPEDEFVSDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRQQEVVSMKF
Ga0207708_1024247813300026075Corn, Switchgrass And Miscanthus RhizosphereMGVEPEEEFISDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRREEVVSM
Ga0207648_1014592313300026089Miscanthus RhizosphereMGVEPEDKFDSEDELKALLERWTTPGPSRVLDKRIETSFAREFSGADRFSTPVLLPLGREEV
Ga0207648_1098650123300026089Miscanthus RhizosphereMSRVERGEEFLSEDELKALLERWMAPGPSKLLDKRVETSFAREFSGAVGPQSIPLPQTREEVVTMKFCTRCEEEF
Ga0207648_1185272023300026089Miscanthus RhizosphereMGVEPEEEFISDDELKSLLKRWVAPGPSRVLDKRITTSFAREFSGAEEVVLMKFCSVCKE
Ga0207676_1060848933300026095Switchgrass RhizosphereMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLP
Ga0207698_1060822023300026142Corn RhizosphereMGVEPEEEFISDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLLPHRREEVVSMKFCS
Ga0207698_1187162423300026142Corn RhizosphereMGVEPGEEFISDDELKSLLERWNAPGPSRVLDERIETSFKREFLGADRLPESVLLPHGRE
Ga0207698_1208626823300026142Corn RhizosphereMGVRPEEEFVPDDELRSLLETWNAPEPSRVLDKRIITSFQREFSGADGLSKSVLLPQRREEVVLMKFCTRCEEE
Ga0179587_1064720813300026557Vadose Zone SoilMNGAGPGEEFISDDELKTLLESWIAPGPSRVLDERIATSFSREFSGAEGLSQPELLPH
Ga0209593_1026968213300027743Freshwater SedimentMSVRPDDEFAPQEELKTLLERWDAPGPSSLLGKRIATSFEKEFSGADRLSQPVLLPQRREEVG
Ga0209180_1048896723300027846Vadose Zone SoilMNGAGPGEEFISDDELKTLLESWIAPGPSRVLDERIATSFTREFSGADELSQPELLPYRR
Ga0268241_1018886813300030511SoilMGVEPEREFVSDDELKSLLERWNAPGPSRVLDKRIETSFAREFSGADRLSQSVLLPHRRE
Ga0308200_113970313300030905SoilMGGVESEDFRSEEDLKTLLERWVAPGPSRVLDKRIATSFTREFSNADGLSQPVLLPQRRE
Ga0310888_1048282623300031538SoilMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGAGGLSQSVL
Ga0307469_1149933013300031720Hardwood Forest SoilMSVRPEDEFVSDNELKSLLKRWDAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSM
Ga0310900_1056400813300031908SoilMGVEPEEEFVSDNELKSLLERWVAPGPSRVLDKRIETSFAREFSGADGLSQSVLL
Ga0307416_10146077323300032002RhizosphereMGVEPEESFVSDDELKSLLERWVAPGPSRVLDKRIETSFAREFSGADRLSQPVLLPHRREEVVSMKFC
Ga0310897_1031757723300032003SoilMGVQPEDKFDSEDELRALLERWTTPGPSRVLDKRIETSFAREFSGADRLLEPVLLPLRREEVV
Ga0310896_1018308413300032211SoilMSRVERDEEFVSEDDLKALLERWTAPGPSKLLDKRIETSFAREFSGAAGLSQSMPLPQTREEVVTMKFCTRC
Ga0373948_0134941_395_6043300034817Rhizosphere SoilMSVQPEDEFVSDNELRSLLKRWVAPEPSRVLDERIKTSFAREFSGADGLSQSVLLPHRREEVVSMKFCSV
Ga0373950_0137736_2_1993300034818Rhizosphere SoilMGVEPEEEFVSDDELSSLLGRWVAPGPSRVLDKRIQTSFAREFSGAEEVVLMKFCSVCKEEFADKF

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.