Metagenome / Metatranscriptome Family F032756

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032756
Family Type	Metagenome / Metatranscriptome
Number of Sequences	179
Average Sequence Length	49 residues
Representative Sequence	MGYGKEYGALLEAIAKEADAIAMRYFRADELRVDRKGDGTAVTQADRA
Number of Associated Samples	143
Number of Associated Scaffolds	179

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.63 %
% of genes near scaffold ends (potentially truncated)	97.77 %
% of genes from short scaffolds (< 2000 bps)	85.47 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.034 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.844 % of family members)
Environment Ontology (ENVO)	Unclassified (30.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.575 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.16% β-sheet: 2.63% Coil/Unstructured: 59.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 179 Family Scaffolds
PF00218	IGPS	82.68
PF00697	PRAI	6.70
PF00291	PALP	3.35
PF07642	BBP2	0.56
PF13714	PEP_mutase	0.56
PF00793	DAHP_synth_1	0.56
PF02153	PDH_N	0.56
PF13230	GATase_4	0.56
PF00459	Inositol_P	0.56
PF00290	Trp_syntA	0.56

COG ID	Name	Functional Category	% Frequency in 179 Family Scaffolds
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	82.68
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	6.70
COG0159	Tryptophan synthase alpha chain	Amino acid transport and metabolism [E]	0.56
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.03 %
Unclassified	root	N/A	13.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.03 %
Unclassified	root	N/A	13.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.03 %
Unclassified	root	N/A	13.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.87 %
Unclassified	root	N/A	13.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.35 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.12 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.56 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	32.96 %
Unclassified	root	N/A	13.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.23 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.96 %
Unclassified	root	N/A	13.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.23 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	0.56 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.96 %
Unclassified	root	N/A	13.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.56 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.56 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.56 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.96 %
Unclassified	root	N/A	13.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.56 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.56 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10339870	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300002907\|JGI25613J43889_10228171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300004080\|Ga0062385_10112265	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300004082\|Ga0062384_100910230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	623	Open in IMG/M
3300004091\|Ga0062387_100476359	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005438\|Ga0070701_11285055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	522	Open in IMG/M
3300005445\|Ga0070708_101007211	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005557\|Ga0066704_10045696	All Organisms → cellular organisms → Bacteria	2748	Open in IMG/M
3300005568\|Ga0066703_10869876	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005602\|Ga0070762_11215521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300005610\|Ga0070763_10478945	Not Available	709	Open in IMG/M
3300005610\|Ga0070763_10647411	Not Available	616	Open in IMG/M
3300005712\|Ga0070764_10954016	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005921\|Ga0070766_10947556	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005921\|Ga0070766_11195155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300006032\|Ga0066696_10531207	Not Available	770	Open in IMG/M
3300006041\|Ga0075023_100279939	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300006052\|Ga0075029_101332309	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300006086\|Ga0075019_10366203	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006174\|Ga0075014_100960309	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006176\|Ga0070765_100824588	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006176\|Ga0070765_101365578	All Organisms → cellular organisms → Bacteria → PVC group	668	Open in IMG/M
3300006176\|Ga0070765_101520258	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300006794\|Ga0066658_10865650	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006796\|Ga0066665_10618200	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300006800\|Ga0066660_10482978	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300006954\|Ga0079219_10658238	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300007255\|Ga0099791_10009630	All Organisms → cellular organisms → Bacteria	4019	Open in IMG/M
3300007258\|Ga0099793_10260075	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300007258\|Ga0099793_10422552	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300007265\|Ga0099794_10038573	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300007265\|Ga0099794_10413318	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300009088\|Ga0099830_10116640	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300009088\|Ga0099830_10865550	Not Available	747	Open in IMG/M
3300009089\|Ga0099828_10168746	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300009090\|Ga0099827_11412841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300009521\|Ga0116222_1233883	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300009700\|Ga0116217_10863761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300010047\|Ga0126382_10229047	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300010048\|Ga0126373_12955869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300011269\|Ga0137392_10484537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300011270\|Ga0137391_10512024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300011271\|Ga0137393_10164777	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300011271\|Ga0137393_10463007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300012096\|Ga0137389_10498369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300012189\|Ga0137388_10315697	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300012189\|Ga0137388_10914127	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	811	Open in IMG/M
3300012189\|Ga0137388_11557253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300012189\|Ga0137388_11602107	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300012189\|Ga0137388_11826214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012199\|Ga0137383_10140613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1765	Open in IMG/M
3300012199\|Ga0137383_10377468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300012200\|Ga0137382_11089127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300012202\|Ga0137363_10470695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300012202\|Ga0137363_10583263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300012203\|Ga0137399_10059868	All Organisms → cellular organisms → Bacteria	2811	Open in IMG/M
3300012205\|Ga0137362_10585738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300012205\|Ga0137362_10791167	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300012208\|Ga0137376_11505301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012210\|Ga0137378_10107227	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300012210\|Ga0137378_10145916	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300012285\|Ga0137370_10838181	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300012349\|Ga0137387_11217622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012351\|Ga0137386_10159253	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300012359\|Ga0137385_10166028	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300012361\|Ga0137360_10705422	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300012363\|Ga0137390_11454119	Not Available	628	Open in IMG/M
3300012917\|Ga0137395_10376811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300012918\|Ga0137396_10102191	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300012918\|Ga0137396_11140307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012922\|Ga0137394_10099257	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300012923\|Ga0137359_10209887	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300012924\|Ga0137413_10574217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300012925\|Ga0137419_10429993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300012931\|Ga0153915_13408389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012944\|Ga0137410_10587554	Not Available	919	Open in IMG/M
3300012975\|Ga0134110_10308206	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300015051\|Ga0137414_1074460	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	834	Open in IMG/M
3300015054\|Ga0137420_1333512	Not Available	3788	Open in IMG/M
3300015054\|Ga0137420_1477315	Not Available	4072	Open in IMG/M
3300016387\|Ga0182040_10041126	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300017659\|Ga0134083_10202037	Not Available	820	Open in IMG/M
3300017823\|Ga0187818_10513075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300017933\|Ga0187801_10023542	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300017942\|Ga0187808_10155233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300017943\|Ga0187819_10489295	Not Available	702	Open in IMG/M
3300017955\|Ga0187817_11022306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300017961\|Ga0187778_10305546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300017961\|Ga0187778_11274843	Not Available	517	Open in IMG/M
3300018006\|Ga0187804_10547694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300018007\|Ga0187805_10156548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300018022\|Ga0187864_10301128	Not Available	716	Open in IMG/M
3300018060\|Ga0187765_10292966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300018090\|Ga0187770_10094943	All Organisms → cellular organisms → Bacteria	2217	Open in IMG/M
3300018468\|Ga0066662_11286222	Not Available	748	Open in IMG/M
3300019788\|Ga0182028_1217993	Not Available	744	Open in IMG/M
3300019890\|Ga0193728_1056565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1896	Open in IMG/M
3300020018\|Ga0193721_1062042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300020170\|Ga0179594_10065773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300020579\|Ga0210407_10038987	All Organisms → cellular organisms → Bacteria	3534	Open in IMG/M
3300020579\|Ga0210407_11000502	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300020580\|Ga0210403_10703371	Not Available	809	Open in IMG/M
3300020580\|Ga0210403_11100052	All Organisms → cellular organisms → Bacteria → Terrabacteria group	617	Open in IMG/M
3300020580\|Ga0210403_11444339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300020581\|Ga0210399_10009872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7461	Open in IMG/M
3300020583\|Ga0210401_10368905	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300021086\|Ga0179596_10347492	Not Available	744	Open in IMG/M
3300021088\|Ga0210404_10163377	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300021168\|Ga0210406_10580440	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300021171\|Ga0210405_10368550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300021171\|Ga0210405_10506973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300021178\|Ga0210408_10112893	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300021401\|Ga0210393_10795895	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300021404\|Ga0210389_11455335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300021476\|Ga0187846_10047982	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300021478\|Ga0210402_11379917	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300021478\|Ga0210402_11658619	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300021478\|Ga0210402_11914845	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300021479\|Ga0210410_10103002	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300021479\|Ga0210410_10240312	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300021479\|Ga0210410_11154736	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300022557\|Ga0212123_10802642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300022722\|Ga0242657_1241644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300022840\|Ga0224549_1012866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300024330\|Ga0137417_1377429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4698	Open in IMG/M
3300025625\|Ga0208219_1074496	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300025906\|Ga0207699_10607126	Not Available	797	Open in IMG/M
3300026215\|Ga0209849_1021631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088	Open in IMG/M
3300026551\|Ga0209648_10009912	All Organisms → cellular organisms → Bacteria → Acidobacteria	8258	Open in IMG/M
3300026557\|Ga0179587_10637336	Not Available	702	Open in IMG/M
3300026557\|Ga0179587_11151121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300027565\|Ga0209219_1037046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300027603\|Ga0209331_1019685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1749	Open in IMG/M
3300027629\|Ga0209422_1054241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300027635\|Ga0209625_1011597	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300027635\|Ga0209625_1031300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300027645\|Ga0209117_1072367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300027655\|Ga0209388_1080937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300027674\|Ga0209118_1076533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300027738\|Ga0208989_10137001	Not Available	825	Open in IMG/M
3300027748\|Ga0209689_1009631	All Organisms → cellular organisms → Bacteria	6483	Open in IMG/M
3300027846\|Ga0209180_10137892	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300027846\|Ga0209180_10281561	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300027853\|Ga0209274_10064721	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300027855\|Ga0209693_10348489	Not Available	719	Open in IMG/M
3300027875\|Ga0209283_10820248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300027879\|Ga0209169_10288029	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300027884\|Ga0209275_10803501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300027898\|Ga0209067_10292159	Not Available	894	Open in IMG/M
3300027902\|Ga0209048_10798321	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300027903\|Ga0209488_10004384	All Organisms → cellular organisms → Bacteria	11056	Open in IMG/M
3300027910\|Ga0209583_10318109	Not Available	713	Open in IMG/M
3300028021\|Ga0265352_1011064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300028871\|Ga0302230_10303800	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300028906\|Ga0308309_11698957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300029636\|Ga0222749_10018557	All Organisms → cellular organisms → Bacteria	2862	Open in IMG/M
3300030056\|Ga0302181_10371604	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300030862\|Ga0265753_1111237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300030945\|Ga0075373_10968580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300031231\|Ga0170824_109481050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300031474\|Ga0170818_101915366	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300031573\|Ga0310915_10519572	Not Available	846	Open in IMG/M
3300031708\|Ga0310686_104255931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300031715\|Ga0307476_10980617	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031718\|Ga0307474_10257951	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300031720\|Ga0307469_10106241	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300031754\|Ga0307475_10028602	All Organisms → cellular organisms → Bacteria	4017	Open in IMG/M
3300031754\|Ga0307475_10357035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300031962\|Ga0307479_10498410	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031962\|Ga0307479_10999249	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031962\|Ga0307479_11160818	Not Available	737	Open in IMG/M
3300031962\|Ga0307479_12129945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300032180\|Ga0307471_101434347	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300032180\|Ga0307471_102969544	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300032205\|Ga0307472_100557430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300032205\|Ga0307472_101641245	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300032805\|Ga0335078_10507637	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300034091\|Ga0326724_0035948	All Organisms → cellular organisms → Bacteria	3851	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.83%
Aquatic	Environmental → Aquatic	11.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.03%
Freshwater	Environmental → Aquatic → Freshwater	7.26%
Sediment	Environmental → Aquatic → Sediment	3.35%
Peat	Environmental → Terrestrial → Peat	2.23%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.56%
Cave	Environmental → Terrestrial → Cave	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.60%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.23%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.56%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.15%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.23%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.56%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.12%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.12%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.56%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.56%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.56%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.56%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.56%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.56%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028021	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE5	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103398702	3300001593	Forest Soil	MGFRXEYGEXLEAIAREADAIAMRYFRADELRIERKGDGTAVTQADRGVEEM
JGI25613J43889_102281711	3300002907	Grasslands Soil	MGFKAEYGDLLDQIAQEADAIALRYFRADELRVDRKGDGTAVTQADRAVE
Ga0062385_101122653	3300004080	Bog Forest Soil	MPKKGERMGFQAEYGALLQAIAEEADAIAMRYFRAEELRVDRKGDGS
Ga0062384_1009102302	3300004082	Bog Forest Soil	MGYREEYGVLLEELAREADAIAIRYFRTDDIRIDKKDDGSA
Ga0062387_1004763591	3300004091	Bog Forest Soil	MGFREEFEPLLESIAQEADAIAMRYFRTADVRIDRKGDGSPVTQAD
Ga0070701_112850552	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSYRAEYGSLLEELAKEADAIAMRFFRADEIRIDRKDDGSAVTQADRGVEEMARAKVAASGLA
Ga0070708_1010072111	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSYRAEYGSLLEDIAKEADAIAMKYFRAVGMRVDRKSDGSAVTQADRAVEEMARAKVAASGLALDV
Ga0066704_100456964	3300005557	Soil	MGYAKEYGALLEAIAKEGDAIAMRYFRADELRVDRKGDGTAVTQADRAVE
Ga0066703_108698761	3300005568	Soil	MSYRAEYGSLLEEIAKEADAIAMKYFRADGMRVERKGDGTAVTQADRAVEEMARA
Ga0066705_106285901	3300005569	Soil	MGFAQQYGALLTAIADEADAMSMRAFRADDLRVSR
Ga0070762_112155212	3300005602	Soil	MGYREEYGLLLEDLAREADAIAIRYFRADEIRIDRKDD
Ga0070763_104789451	3300005610	Soil	MEYGQVYGALFETIANEAQAIAMRYFRAEELRVDRKGDGTAVTQA
Ga0070763_106474112	3300005610	Soil	MGYQEEYGLLLEELAKEADAIAMRFFRTEEIRIDRKDDGSAV
Ga0070764_109540161	3300005712	Soil	MGEGMGYRDEYGALLEELIKEADAIATRFFRTSEIRIDKKDDGSAVTQADRGVEEMARAKVAASGLAMDVL
Ga0070766_109475562	3300005921	Soil	MGYREEYGLLLEELAKEADAIAMRFFRSEEIRIHQKDDGSAVTQADRNVEEMARAKVAA
Ga0070766_111951551	3300005921	Soil	MGEGMGYRDEYGALLEELIKEADAIAMRFFRTAEIRIEKKDDGSAVTQADRRVEEMARA
Ga0066696_105312072	3300006032	Soil	MGYGEVYGRLLNEIAEEADAIAMRYFRGDELRVDR
Ga0075023_1002799391	3300006041	Watersheds	MSYRAEYGALLEDIAKEADAIATKYFRSAGMEVQRKGDGSAVTLADRAVEEMARAKVAASAIA
Ga0075029_1013323092	3300006052	Watersheds	MSYSKKYAGLLKQIADEADGISMKYFRSAEMRIERKYDGSAVTQGDKAVEEMARGKIAASGLELDVL
Ga0075019_103662031	3300006086	Watersheds	MGNSQEYGALLEAIAQEADAIAMRYFRADELHVDRKGDGTAVTQADR
Ga0075014_1009603091	3300006174	Watersheds	MSYAKRYAALMEQIADEADLISMRYFRSVEMRVERKGDGSAVTQGDK
Ga0070765_1008245881	3300006176	Soil	MGYREEYGALLEELLKEADAIAMRFFRADEIRIERKDDGSTVTQADRGVEEMARAKV
Ga0070765_1013655782	3300006176	Soil	MGYREEYGPLLDSIVQEGDLIAMRYFRAVEMRVDRKG
Ga0070765_1015202581	3300006176	Soil	MGYRDEYGALLEEIVGEADAIAMRFFRTGDIRIDKKEDGSAVTQADRGVE
Ga0066658_108656501	3300006794	Soil	MGYGKTYAALLEAIAEEADAIAMRYFRTDELRTERKGDGTAVTQADRAVEEMA
Ga0066665_106182001	3300006796	Soil	MGYGETFGSLLEAIAEEADAIAMRYFRAEELRIDRKSDGTVVTEADRSVEEMARARVAASGLALD
Ga0066660_104829782	3300006800	Soil	MGYGETYGSLLETIAEEADAIAMRYFRAEELRIDRKGDGTAVTQADRSVEA
Ga0079219_106582381	3300006954	Agricultural Soil	MSYRAQYGELLEDIAREADKIAMKYFRADGMRVERKGDGTAVTQADRAVEEMARAKVAGSALVL
Ga0099791_100096306	3300007255	Vadose Zone Soil	MGYAKEYGTLLEAIAQEADAIAMRYFRADELRVDRK
Ga0099793_102600752	3300007258	Vadose Zone Soil	MSYRAEYGSLLEDIAKEADIIAMKYFRVDGMRVDRKSDGSAVTQ
Ga0099793_104225522	3300007258	Vadose Zone Soil	MGEAMGYGEMYGALLEAIAEQADSIAMRYFRAEELRTERKGDGTAV
Ga0099794_100385731	3300007265	Vadose Zone Soil	MGYGKTYGALLEAIAVEADAIAMRYFRAEELRIERKGDGSAVTQA
Ga0099794_104133182	3300007265	Vadose Zone Soil	MGFREEYGELLQAIAQEADAIAMRYFRADELRIERKGDGTAVTQADR
Ga0099830_101166404	3300009088	Vadose Zone Soil	MSYRAEYGSLLDDIAKEADAMAMKYFRADGMRVERKG
Ga0099830_108655502	3300009088	Vadose Zone Soil	MGHRKEYGELLEAIAKEADAIAMRYFRAVEMRVERKSDGTAVTQADR
Ga0099828_101687461	3300009089	Vadose Zone Soil	MSYRAEYGSLLEDIAKEADAIAMKYFRADSMRVERKGDGTAITQADRAVEEM
Ga0099827_114128411	3300009090	Vadose Zone Soil	MGYGKEYGALLEAIAKDGDAIAMRYFRADELRVDRKGDGTAVTQADRAVEEMERAKVAA
Ga0116222_12338831	3300009521	Peatlands Soil	MAYGEKYRTLLEAIAGVADAIASRYFRAAEMRVERKLDGTVVTQADKEIETMARALVKESGLPLDVLG
Ga0116217_108637611	3300009700	Peatlands Soil	MGYGEKYRTLLEVIAEEADAIASRYFRAVEMRVERKRDGTAVTQADKEVEAMARAKVTASGLPLDV
Ga0126382_102290471	3300010047	Tropical Forest Soil	MMGYGETYGALLKAIAEEAEAIAMRYFRADELRVERKHDGTAVTQADRAVEAMARARVAS
Ga0126373_129558691	3300010048	Tropical Forest Soil	MMGYGETYGALLKAIAEEAEAIAMRYFRADELRVERKHDGTAVTQADRAVEAMAR
Ga0137392_104845372	3300011269	Vadose Zone Soil	MGHGETYGALLEAIAKEADAIAMRYFRTDELRVDRKGDGTAVT
Ga0137391_105120241	3300011270	Vadose Zone Soil	MGFREEYGELLQAIAQEADAIAMRYFRADELRVDRKGDGTAVTQADR
Ga0137393_101647771	3300011271	Vadose Zone Soil	MGHGETYGALLEASAKEADAIAMRYFRADELRGDRKGDGTAVTQADRAVEEMARAKVA
Ga0137393_104630071	3300011271	Vadose Zone Soil	LVKEHFTKRNAGEMMSYRAEYGSLLEDIAKEAEVIAMKYFRADGMRVDRKSDGSAVTQADRAVEEMARAKV
Ga0137389_104983691	3300012096	Vadose Zone Soil	MRYAGKGEAMGFRDEYGALLAGIAEEADAIAMRYFRADDLRIEKK
Ga0137388_103156973	3300012189	Vadose Zone Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRIERKGDGTAV
Ga0137388_109141272	3300012189	Vadose Zone Soil	MFMGEMMGYGQQYGALLKEVAEAADAIAMRYFRADELRVERKR
Ga0137388_115572532	3300012189	Vadose Zone Soil	MGYGEEYGTLLEGIAEEADAIAMKYFRAEELRIDRKGDGTA
Ga0137388_116021072	3300012189	Vadose Zone Soil	MSYRAEYGPLLEAIAREADAIAMKYFRADDMRVERKGDGTAVTQAD
Ga0137388_118262142	3300012189	Vadose Zone Soil	MGFREEYGELLQAIAQEADAIAMRYFRADELRVDRKGDGTAVTQA
Ga0137383_101406131	3300012199	Vadose Zone Soil	MGYGEVYGSLLKEIAEEADAIATRYFRGEELRVDRKGDGTA
Ga0137383_103774681	3300012199	Vadose Zone Soil	MGEIVGYGQQYGALLQAIAKEADAIAMRYFRADELRIERKGDGTAVTQADRGVEEMARAKVTAS
Ga0137382_110891272	3300012200	Vadose Zone Soil	MKDGHKGEGMGYSKEYGALLDAIAKEADAIALRYFRADELRVDRKGDG
Ga0137363_104706951	3300012202	Vadose Zone Soil	MGYGEMYGSLLKAIAEEADAIVMRYFRTGDLRIDRKGDGTAVTQADRAV
Ga0137363_105832632	3300012202	Vadose Zone Soil	MSYRAEYGSLLDDIAKEADAMAMKYFRADGMRVERKGDGTAITQADRAVEEMAR
Ga0137399_100598684	3300012203	Vadose Zone Soil	MMSYRAEYGSLLDDIAKEADAIAMKYFRADGMRVERKGDGTAITQADRA
Ga0137362_105857381	3300012205	Vadose Zone Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRIERKGDGTAVTQADR
Ga0137362_107911673	3300012205	Vadose Zone Soil	MMGYGEMYGALLEAIAKEGDAIAMRYFRTGDLRIDRKGDGTAVTQADRAVEEMAR
Ga0137376_115053011	3300012208	Vadose Zone Soil	MGYRAVYGKLLEEITQEADKIALKYFRAIELRVERKKDGTAVTQADRAVE
Ga0137378_101072274	3300012210	Vadose Zone Soil	MGEAMGYGETYGALLEAIAEQADSIAMRYFRAEELRTERK
Ga0137378_101459164	3300012210	Vadose Zone Soil	MGYGEVYGSLLKEIAEEADAIATRYFRGEELRVDRKGDG
Ga0137370_108381811	3300012285	Vadose Zone Soil	MGYGETFGSLLEAIAEEADAIAMRYFRAEELRIDRKGDGTAVTEADRSVEVMARARVAASGL
Ga0137387_112176222	3300012349	Vadose Zone Soil	MGEIVGYGQQYGALLQAIAKEADAIAMRYFRADELRVDRKG
Ga0137386_101592531	3300012351	Vadose Zone Soil	MGEAMGYGETYGALLEAIAEQADSIAMRYFRAEELRTERKGDGTAVTQADRAV
Ga0137385_101660284	3300012359	Vadose Zone Soil	MGEAMGYGQEYGALLEAIAQEAERIALNYFRAEKLRVDRKGDGSAVTQADRAVEEMARE
Ga0137360_107054221	3300012361	Vadose Zone Soil	MMSYRAEYGSLLEDIAKEADIIALKYFRADGMRVDRKSDGSA
Ga0137390_114541192	3300012363	Vadose Zone Soil	MGYRAEYGALLEEIVREADAIALRYFRAVELRVERKKDGTAVTQADRAV
Ga0137395_103768111	3300012917	Vadose Zone Soil	MMSYRAEYGSLLDDIAKEADIIAMKYFRADGMRVDRKSDGSAVTQADRAVEEMARAKVA
Ga0137396_101021911	3300012918	Vadose Zone Soil	MGYREEYGALLEAIAREAEAIAMRYFRADELRVDRKGDGTAVTQADRAVE
Ga0137396_111403072	3300012918	Vadose Zone Soil	MGYGETYGALLEAIAEEADAIAMRYFRADELRIERKGDGTAVTQA
Ga0137394_100992574	3300012922	Vadose Zone Soil	MYGSLLKAIAEEADAIAMRYFRTGDLRIDRKGDGTT
Ga0137359_102098873	3300012923	Vadose Zone Soil	MYGALLKAIAEEADAIAMRYFRTGDLRIDRKGDGTA
Ga0137413_105742171	3300012924	Vadose Zone Soil	MSYRAEYGSLLEDIAKDADVIAMKYFRADGMRVDRKSDGTAV
Ga0137419_104299932	3300012925	Vadose Zone Soil	MGFREEYGELLQAIAEEADASAMRYFRADELRVERKGDGTAVTQAD
Ga0153915_134083892	3300012931	Freshwater Wetlands	MGYREEYGALLETIAGDAERIAMLYFRSEAMRIDRKGDGSVVTQADRAI
Ga0137410_105875542	3300012944	Vadose Zone Soil	MGYGEEYGRLLEEVAREADAIAMRYFRADEIRIDKKDDGSAVTQA
Ga0134110_103082062	3300012975	Grasslands Soil	MGYGEVYGGLLNEIAEEADAIAMRYFRGDELRVDQKGDGTAVT
Ga0137414_10744602	3300015051	Vadose Zone Soil	MMSYRAEYGSLLEDIAKDADAIAMKYFRADGMRVDRKSDGTAVTQADRAVEEMARAKVAA
Ga0137420_13335121	3300015054	Vadose Zone Soil	METISEGKKMSYRAEYVALLEEIAKEADAIAMKYFRADGMRVERKGDGTPV
Ga0137420_14773159	3300015054	Vadose Zone Soil	MGFREEYGELLEAIAQEADAIAMRYFRADELRVERKGDGRQ*
Ga0182040_100411264	3300016387	Soil	MGYGEKYGVLLKAIAEEADAIAMQYFRTAEMRVERKQDGTAVTQADKAVE
Ga0134083_102020371	3300017659	Grasslands Soil	MGYGEVYGGLLNEIAEEADAIAMRYFRGDELRIDRKGDGTAVTQADRGVEE
Ga0187818_105130751	3300017823	Freshwater Sediment	MEYGKEYGDLLKAIAEEADAIAIKYFRADGLQIDKKSDGTAVTQADRAVE
Ga0187801_100235421	3300017933	Freshwater Sediment	MGYGKEFGALLEAIAKEADAIAMKYFRADGLQIERKGDGTA
Ga0187808_101552331	3300017942	Freshwater Sediment	MGYGKEFGALLEAIAKEADAIAMKYFCADGLQIERKGDGTAVTQADRAVEEMA
Ga0187819_104892952	3300017943	Freshwater Sediment	MGFRQKYGRLFEEISREADAITLRYFRAAGTTTERKKDGTAVTRADYEVETMARAK
Ga0187817_110223062	3300017955	Freshwater Sediment	MGYGKEFGGLLEAIAKEADAIAMKYFRADGLQIERKGDGTAVTQAD
Ga0187778_103055462	3300017961	Tropical Peatland	MGYQEEYGGLLEEIARGADAIAMKYFRTGQVHIDRKD
Ga0187778_112748431	3300017961	Tropical Peatland	MGYGEKYKALLEAIAEEADAIAGRYFRAAEMRVERKLDGTAVTQADKEVEAMARAKV
Ga0187804_105476941	3300018006	Freshwater Sediment	MGYRKEYGELLEAIAKEADAIAMSYFRAVEMRIERKT
Ga0187805_101565481	3300018007	Freshwater Sediment	MEYGKKYGDVLKAMAEEADAIAMKYFRADGLQIDKKSDGTAVTQA
Ga0187864_103011281	3300018022	Peatland	MGYAEKYKSLLEAIAAEADTIAVKYFRAAEMRIERKQDGSAVTQADKE
Ga0187765_102929662	3300018060	Tropical Peatland	MGFAQEYGALLEAIAHQADAMSMRYFRADSTRVERKEDGTALTQADG
Ga0187770_100949431	3300018090	Tropical Peatland	MGYAEKYKALLEAIAAEADTIAVKYFRAAEMRVQRKQDGSALTQADKEVETMARPKVAASGLPLD
Ga0066662_112862222	3300018468	Grasslands Soil	MGEIVGYGQQYGALLQAIAKEADAIAMRYFRADELRVDRKGDG
Ga0182028_12179931	3300019788	Fen	MGYGEKYKALLEAIAEEADAIASRYFRAAEMRVERKRDGTAVTQADKEVGSGSDGARQG
Ga0193728_10565651	3300019890	Soil	MAYREQYGPLLDSIVQEGDLIAMRYFRAVEMRVDRKGDGSAVTQADRGVEEMAR
Ga0193721_10620421	3300020018	Soil	MGYGETFGALLKAIAEEADAIAMRYFRGEELRIDRKGDGTAVTQADRSVEAMARARVAASGLALDVL
Ga0179594_100657733	3300020170	Vadose Zone Soil	MGYGEMYGALLEAIAKEGDAIAMRYFRTGDLRIDRKGD
Ga0210407_100389871	3300020579	Soil	MSYRAEYGSLLEDIAKEADAIAMKYFRADEMRVER
Ga0210407_110005022	3300020579	Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRVDRKGDGTAVTQADRAVEEM
Ga0210403_107033712	3300020580	Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRVDRKGDGTAVTQA
Ga0210403_111000521	3300020580	Soil	MGYQDEYGTLLEELINESDVIAMRFFRSEEIHIDKKDDG
Ga0210403_114443391	3300020580	Soil	MGYGKEYGALLETIAQEADAIALRYFRADELRVDRKGDGTAVTQADRA
Ga0210399_100098721	3300020581	Soil	MGYREEYGLLLEDLAKEADAIAMRFFRAEEIRIDR
Ga0210401_103689051	3300020583	Soil	MGYREEYGALLEDLANEADAIAMRFFRADEIRIDRKDDGSAVTQADRGVEEMARAKVAA
Ga0179596_103474921	3300021086	Vadose Zone Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRIER
Ga0210404_101633771	3300021088	Soil	MSYRAEYGSLLEDIAKEADAIAMKYFRADEMRVERKGDGTAVTQADRAVEEMARAKVT
Ga0210406_105804401	3300021168	Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRVDRKGDGTAVTQADRA
Ga0210405_103685501	3300021171	Soil	MSYRAEYGSLLEDIAKEADAIAMKYFRADEMRVERKGDGTAVTQADRAVEE
Ga0210405_105069732	3300021171	Soil	MGYREEYGLLLEDLAKEADAIAMRFFRAEEIRIDRKDDG
Ga0210408_101128934	3300021178	Soil	MSYRAEYGSLLDDIAKEADAIAMKYFRADGMRVERKGDGTAI
Ga0210393_107958951	3300021401	Soil	MGYQEEYGLLLEELAKEADAIAMRFFRAEEIRIDRKDDGSAVTQADRNVEE
Ga0210389_114553352	3300021404	Soil	MGYRAEYGSLLEDIAKEADAIAMKYFRADEMRVERKGDGTAVTQADRAVE
Ga0187846_100479824	3300021476	Biofilm	MNYGKEYGALLEAIAKEADAIAMRYFRSDGLRIEKKGDGTAVT
Ga0210402_113799172	3300021478	Soil	MGYRKEYGELLEAIAKEAEAIAMRYFRAAEMRVERKHDGSAVTQAER
Ga0210402_116586192	3300021478	Soil	MSYRTKYAGLLESIVNEGDAIAMKYFRGAEMRVERKRDGTAVTQADKAVEEMANAKIA
Ga0210402_119148452	3300021478	Soil	MGYGETYEKLLNAIAEEADKIAMRYFRADESRIDRKGDGTAVTQADRAVEEMARAKV
Ga0210410_101030021	3300021479	Soil	MVMGYGETYAALLEAIAKEADAIAMRYFRAEELRIE
Ga0210410_102403121	3300021479	Soil	MGYHEEYGPLLDSIVQEGDLIAMRYFRTVEMRVDRK
Ga0210410_111547362	3300021479	Soil	MGYREEYGPLLEELAKEADAIAMRFFRGQEIRIDRKDDGSAVTQ
Ga0212123_108026422	3300022557	Iron-Sulfur Acid Spring	MGYREVYGPLLDSIVQEGDVIAMQYFRGVEMRVDRKGDGSAVTQADRGVEEMAH
Ga0242657_12416442	3300022722	Soil	MGYREEYGLLLEELAKEADGIAMRFFRAEEIRIHRKDDGS
Ga0224549_10128661	3300022840	Soil	MGFRDEYGGLLEAIANEADAIAMSYFRSDRIRVERKGDGTAVTAADRAVEEMARAKVAAS
Ga0137417_13774299	3300024330	Vadose Zone Soil	MGYSKEYGALLEAIANEADAIAMRYFRADELRVERKGDGSA
Ga0208219_10744963	3300025625	Arctic Peat Soil	MGYREEYGPLLEAIVQEGDLIAMRYFRAVEMRVERKRDGSAVTQADRGVEEMARDKVAASGLALD
Ga0207699_106071261	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSYRAEYGSLLEELAKEADAIAMRFFRADEIRIDRKDDGSAVTQADRGVEEM
Ga0209849_10216311	3300026215	Soil	MGYREEYGSLLEAIVQEGDVIAMRYFRAVEMRVERKRDGSAVTQADRGE
Ga0209648_100099129	3300026551	Grasslands Soil	MGYGETYGALLEAIAEEADAIAMRYFRADELRVERKGDGTAVTQA
Ga0179587_106373362	3300026557	Vadose Zone Soil	MSYRAEYGSLLDDIAKEADAMAMKYFRADGMRVERKGDGTAITQADRAVEEMARAKVT
Ga0179587_111511211	3300026557	Vadose Zone Soil	MSYRSEYGSLLEDIANEADVIAMKYFRADGMRVDRKSDGSAVTQADRAVEEMARSKV
Ga0209219_10370461	3300027565	Forest Soil	MSYRAEYGGLLEAIAREADAIAMKYFRADGMRVDRKLDGTA
Ga0209331_10196854	3300027603	Forest Soil	MGYREEYGELLEAIAREADAIAMKYFRADEMRVERKGDGTAVTQA
Ga0209422_10542412	3300027629	Forest Soil	MGYREEYGPLLDSIVREGDVIAMRYFRAVEMRVDRKGDGSAVT
Ga0209625_10115971	3300027635	Forest Soil	MSYRAEYGELLEAIAQEADAIAMKYFRADGMRVDRKLDGTAVTQADRAVEEMAR
Ga0209625_10313002	3300027635	Forest Soil	MGYREEYGPLLDSIVQEGDLIAMRYFRAAEMRVDRKGDGSAVTQADRGV
Ga0209117_10723671	3300027645	Forest Soil	MGFRQEYGALLEEIVQEADAIAMRYFRAAEMRVARKADGTAITPADQEVEEMARAK
Ga0209388_10809371	3300027655	Vadose Zone Soil	MGYAKEYGTLLEAIAQEADAIAMRYFRADELRVDRKG
Ga0209118_10765332	3300027674	Forest Soil	MGYRKEYGPLLDSIVQEGDLIAMRYFRAVEMRVDRKGDGSAVTQA
Ga0208989_101370012	3300027738	Forest Soil	MSYRAEYGSLLEDIAKEADIIAMKYFRADGMRVDRKSDGSAVTQ
Ga0209689_10096312	3300027748	Soil	MGYGEVYGGLLNEIAEEADAIAMRYFRGDELRIDRKGDGTAVTQADRAVEEMRFRSRRPRKL
Ga0209180_101378921	3300027846	Vadose Zone Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRIERKGDGTAVTQADRAVE
Ga0209180_102815612	3300027846	Vadose Zone Soil	MSYRAEYGSLLEDIAKEADVIAMKYFRADGMRVDRKSDGSAVTQADRAVEEMARAKVAASGLALD
Ga0209274_100647211	3300027853	Soil	MVGYREQYGALLEAIANEADAMAMGYFRALGLRVQRKD
Ga0209693_103484891	3300027855	Soil	MEYGQVYGALFETIANEAQAIAMRYFRAEELRVDRKGDGTAVTQADRAV
Ga0209283_108202481	3300027875	Vadose Zone Soil	MSYRAEYGALLEAIAREADAIAMKYFRADQMRVERKGDGTAVTQADRAVEEMARAKV
Ga0209169_102880291	3300027879	Soil	MGYRDEYGALLEEIVGEADAIAMRFFRTGDIRIDKKEDGS
Ga0209275_108035011	3300027884	Soil	MGYREEYGLLLEDLAREADAIAIRYFRADEIRIDRKDDGTAVT
Ga0209067_102921592	3300027898	Watersheds	MGYAEVYGNLLEAIAQEADAIAMKYFRAKELQIDRKSDGSAVTQAD
Ga0209048_107983211	3300027902	Freshwater Lake Sediment	MGYAKTYGALLEAIVNEADAISMRYFRSAEMRVERKHDGSAVTQGDKAVEEMARAKV
Ga0209488_100043841	3300027903	Vadose Zone Soil	MGYGKEYGALLEAIAKEADAIAMRYFRADELRIERKGDGTAVTQADRAVEEL
Ga0209583_103181091	3300027910	Watersheds	MSYRGEFGSLLEDIAKEADAIAMKYFRADEMRVERKRDGTAGTQADRAVEEMARAKVAASGLALDV
Ga0265352_10110642	3300028021	Soil	MGYREEYGVLLEELAREADAIAIRYFRTDEIRIDKKDDGSAVT
Ga0302230_103038001	3300028871	Palsa	MGFRDEYGGLLEAIANEADAIAMSYFRSDRIRVERKGDGTAVTAAD
Ga0308309_116989572	3300028906	Soil	MGYREKYGPLLDAIVQEGDLVAMRYFRAVEMRVDRKDDGSA
Ga0222749_100185571	3300029636	Soil	MGHGEKYGALLEAIAQEADAIAMRYFRAEELRVDRKGDGTAVTQADRDV
Ga0302181_103716042	3300030056	Palsa	MGFRDEYGGLLEAIANEADAIAMSYFRSDRIRVERKGDGTAVTAADRAVEEMA
Ga0265753_11112372	3300030862	Soil	MGYREEYGPLLDSIVQEGDLIAIRYFRAVEMRVDRKGDGSAVTQADRGVE
Ga0075373_109685801	3300030945	Soil	MGYRAEYGTLLEEIVREADAIALRYFRAVELRVERKKDGTAVTQADRAVEEMA
Ga0170824_1094810502	3300031231	Forest Soil	MGYRDEYGSLLDSIVQEGDLIAMRYFRAVEMRVDRKGDGSAVT
Ga0170818_1019153662	3300031474	Forest Soil	MGYREVYGPLLDSIVQEGDLIAMRYFRAVEMRVDRKGDGSAVTQADRGVEEMARKK
Ga0310915_105195721	3300031573	Soil	MGYGEKYGVLLKAIAEEADAIAMQYFRTAEMRVERKQDGTAVTQAD
Ga0310686_1042559311	3300031708	Soil	MGYREEYGLLLEDLAREADAIAIRYFRADEIRIDRKDDGSAVTQAD
Ga0307476_109806171	3300031715	Hardwood Forest Soil	MGYREEYGPLLEEIAKEADAIAMRFFRADEIRIDRKDD
Ga0307474_102579511	3300031718	Hardwood Forest Soil	MGYGETYGALLEAIAKEADAIAMRYFRADELRVERKGDGTAVTQADRAVE
Ga0307469_101062411	3300031720	Hardwood Forest Soil	MEYGEMYGSLLKAIAEEADAIAMRYFRTGDLRIDRKG
Ga0307475_100286025	3300031754	Hardwood Forest Soil	MGFQEEYGDLLEAIAREADAIAMRYFRRDELRVDRKGDG
Ga0307475_103570351	3300031754	Hardwood Forest Soil	MGYRKEYGELLEAIAKEAEAIAMRYFRAAEMRVERKHDGSAV
Ga0307479_104984103	3300031962	Hardwood Forest Soil	MSYRAEYGSLLDDIAKEADAIAMKYFRADGMRVERKGDGTAITQADRGVEEMARAKVTASGL
Ga0307479_109992491	3300031962	Hardwood Forest Soil	MGYAKEYGTLLEAIAQEADAIAMRYFRADELRVDRKGDGTAVTQADRT
Ga0307479_111608181	3300031962	Hardwood Forest Soil	MGFGDEYGALLKSIADEADTVAMRYFRADGMRVERKGDGTA
Ga0307479_121299452	3300031962	Hardwood Forest Soil	MGYRAEYGTLLEEIVREADAIALRYFRAVELRVERKKDGTAVTQADRAV
Ga0307471_1014343471	3300032180	Hardwood Forest Soil	MSYRAEYGALLEDIAKEADAIAMKYFRTDGMRVERKGDGTP
Ga0307471_1029695442	3300032180	Hardwood Forest Soil	MAYANKYGALLEAIVNEADAIAMRYFRSAEMRVERKYDGSAVTQGDKAVEEMARAK
Ga0307472_1005574301	3300032205	Hardwood Forest Soil	MSYRAEYGSLLEDIAKEADAIAMRYFRADEMRVERKRDGTAVTQADRGV
Ga0307472_1016412451	3300032205	Hardwood Forest Soil	MGGERMGYAEMYGALLEAIAKEADAIAMRYFRTGDLRIDR
Ga0335078_105076373	3300032805	Soil	MGYQKEYGALLESIANEADAIAMRLFRSTDIRVDKKDDGSAVTQADRGVE
Ga0326724_0035948_1_216	3300034091	Peat Soil	MGYAEKYKSLLEAIAAEADTIAVKYFRAAEMRVERKQDGSALTPADKEVEAMARAKVAASGLPLDVLGEEMG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032756

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences