NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F032466

Metagenome / Metatranscriptome Family F032466

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F032466
Family Type Metagenome / Metatranscriptome
Number of Sequences 180
Average Sequence Length 43 residues
Representative Sequence MTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFPTPAD
Number of Associated Samples 153
Number of Associated Scaffolds 180

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.56 %
% of genes near scaffold ends (potentially truncated) 98.89 %
% of genes from short scaffolds (< 2000 bps) 91.11 %
Associated GOLD sequencing projects 147
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.556 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(12.778 % of family members)
Environment Ontology (ENVO) Unclassified
(28.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.556 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.66%    β-sheet: 0.00%    Coil/Unstructured: 56.34%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 180 Family Scaffolds
PF00296Bac_luciferase 18.33
PF00248Aldo_ket_red 7.78
PF13561adh_short_C2 7.22
PF12804NTP_transf_3 6.11
PF04909Amidohydro_2 4.44
PF00753Lactamase_B 4.44
PF16868NMT1_3 3.89
PF06348DUF1059 2.78
PF05977MFS_3 2.22
PF02515CoA_transf_3 2.22
PF03401TctC 1.67
PF13442Cytochrome_CBB3 1.67
PF00575S1 1.67
PF00326Peptidase_S9 1.11
PF02668TauD 1.11
PF12146Hydrolase_4 1.11
PF09084NMT1 1.11
PF01019G_glu_transpept 1.11
PF02775TPP_enzyme_C 1.11
PF06314ADC 1.11
PF05721PhyH 1.11
PF00710Asparaginase 0.56
PF13185GAF_2 0.56
PF01022HTH_5 0.56
PF02776TPP_enzyme_N 0.56
PF08659KR 0.56
PF07969Amidohydro_3 0.56
PF03446NAD_binding_2 0.56
PF00005ABC_tran 0.56
PF09448MmlI 0.56
PF12802MarR_2 0.56
PF11893DUF3413 0.56
PF00496SBP_bac_5 0.56
PF00106adh_short 0.56
PF00072Response_reg 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 180 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 18.33
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 2.22
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 2.22
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.67
COG0252L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit DTranslation, ribosomal structure and biogenesis [J] 1.11
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 1.11
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.11
COG2175Taurine dioxygenase, alpha-ketoglutarate-dependentSecondary metabolites biosynthesis, transport and catabolism [Q] 1.11
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.11
COG4689Acetoacetate decarboxylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.11
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 1.11


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.56 %
UnclassifiedrootN/A19.44 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c1813648All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300000443|F12B_10018749All Organisms → cellular organisms → Bacteria → Proteobacteria1673Open in IMG/M
3300000550|F24TB_10580343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium868Open in IMG/M
3300000955|JGI1027J12803_106648559All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300002558|JGI25385J37094_10038863Not Available1646Open in IMG/M
3300002561|JGI25384J37096_10064276Not Available1360Open in IMG/M
3300005181|Ga0066678_10220876Not Available1216Open in IMG/M
3300005183|Ga0068993_10074268All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1043Open in IMG/M
3300005334|Ga0068869_100010991All Organisms → cellular organisms → Bacteria5928Open in IMG/M
3300005336|Ga0070680_100519957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae1019Open in IMG/M
3300005441|Ga0070700_100760146All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300005446|Ga0066686_10686884Not Available692Open in IMG/M
3300005447|Ga0066689_11034983All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005458|Ga0070681_10589528All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1026Open in IMG/M
3300005467|Ga0070706_102026145All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300005526|Ga0073909_10488141Not Available594Open in IMG/M
3300005556|Ga0066707_10934263All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium531Open in IMG/M
3300005561|Ga0066699_11094053All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300005577|Ga0068857_102354898All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005618|Ga0068864_101417614All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005618|Ga0068864_102035090All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae580Open in IMG/M
3300005718|Ga0068866_10994132Not Available596Open in IMG/M
3300005764|Ga0066903_103501826All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300005764|Ga0066903_106834066All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300005843|Ga0068860_100505842Not Available1206Open in IMG/M
3300006163|Ga0070715_10192805Not Available1030Open in IMG/M
3300006796|Ga0066665_10038350All Organisms → cellular organisms → Bacteria3214Open in IMG/M
3300006797|Ga0066659_10017383All Organisms → cellular organisms → Bacteria4033Open in IMG/M
3300006846|Ga0075430_101250885All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300006847|Ga0075431_100315648All Organisms → cellular organisms → Bacteria → Proteobacteria1577Open in IMG/M
3300006852|Ga0075433_11075775All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300006852|Ga0075433_11204962All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300006853|Ga0075420_100443317Not Available1122Open in IMG/M
3300006854|Ga0075425_100577783All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300006871|Ga0075434_100719586All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1015Open in IMG/M
3300006880|Ga0075429_100493935All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1072Open in IMG/M
3300006894|Ga0079215_10934074All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium627Open in IMG/M
3300006904|Ga0075424_100253213All Organisms → cellular organisms → Bacteria → Proteobacteria1872Open in IMG/M
3300006954|Ga0079219_10815752All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300007076|Ga0075435_101874156All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria526Open in IMG/M
3300007255|Ga0099791_10223332Not Available890Open in IMG/M
3300009088|Ga0099830_10809452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae773Open in IMG/M
3300009089|Ga0099828_11502118All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300009090|Ga0099827_11745880All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300009094|Ga0111539_11464454All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300009100|Ga0075418_11055725All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300009100|Ga0075418_11412127All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300009147|Ga0114129_10915196All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300009156|Ga0111538_11505499All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300009162|Ga0075423_12111551All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300009162|Ga0075423_12362369All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300009174|Ga0105241_10772032Not Available883Open in IMG/M
3300009177|Ga0105248_12465374All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300009814|Ga0105082_1126285All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300010029|Ga0105074_1051108All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium730Open in IMG/M
3300010043|Ga0126380_11613552All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300010154|Ga0127503_10925419All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium867Open in IMG/M
3300010301|Ga0134070_10000797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9492Open in IMG/M
3300010325|Ga0134064_10499787All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010358|Ga0126370_11826800All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300010359|Ga0126376_10830572Not Available905Open in IMG/M
3300010359|Ga0126376_11518522Not Available699Open in IMG/M
3300010360|Ga0126372_10823971Not Available922Open in IMG/M
3300010361|Ga0126378_10964407All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300010361|Ga0126378_11146794Not Available877Open in IMG/M
3300010362|Ga0126377_12949686All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300010397|Ga0134124_10021698All Organisms → cellular organisms → Bacteria5270Open in IMG/M
3300010868|Ga0124844_1091876Not Available1146Open in IMG/M
3300011271|Ga0137393_10444631Not Available1111Open in IMG/M
3300012096|Ga0137389_11050125All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300012202|Ga0137363_10451605All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300012205|Ga0137362_10673313Not Available890Open in IMG/M
3300012205|Ga0137362_11429103All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012207|Ga0137381_10051965All Organisms → cellular organisms → Bacteria3387Open in IMG/M
3300012207|Ga0137381_11454882All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium577Open in IMG/M
3300012351|Ga0137386_10042146All Organisms → cellular organisms → Bacteria → Proteobacteria3135Open in IMG/M
3300012351|Ga0137386_10424708All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300012362|Ga0137361_11692418All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium552Open in IMG/M
3300012685|Ga0137397_10245637All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300012922|Ga0137394_10272875All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300012922|Ga0137394_10417832Not Available1143Open in IMG/M
3300012971|Ga0126369_12866385All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300012971|Ga0126369_13149396All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012975|Ga0134110_10374878All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300013306|Ga0163162_12708741All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300014150|Ga0134081_10143275All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium780Open in IMG/M
3300014254|Ga0075312_1069810Not Available694Open in IMG/M
3300014265|Ga0075314_1147377All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300014310|Ga0075331_1142061Not Available583Open in IMG/M
3300014326|Ga0157380_10680290Not Available1031Open in IMG/M
3300014326|Ga0157380_10881385All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium919Open in IMG/M
3300015054|Ga0137420_1454636All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300015241|Ga0137418_10974787All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium616Open in IMG/M
3300015264|Ga0137403_11599039All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium505Open in IMG/M
3300015372|Ga0132256_101106195Not Available907Open in IMG/M
3300015373|Ga0132257_101173471Not Available971Open in IMG/M
3300015373|Ga0132257_103175969All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium598Open in IMG/M
3300015374|Ga0132255_100702467All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1502Open in IMG/M
3300016357|Ga0182032_11526668All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium580Open in IMG/M
3300016445|Ga0182038_10760079Not Available847Open in IMG/M
3300017997|Ga0184610_1066160All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1096Open in IMG/M
3300018056|Ga0184623_10141571All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1112Open in IMG/M
3300018089|Ga0187774_11029363All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300018422|Ga0190265_11512508All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300018422|Ga0190265_12947614All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300018429|Ga0190272_10634666All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae946Open in IMG/M
3300018433|Ga0066667_10494429Not Available1007Open in IMG/M
3300018468|Ga0066662_10751958Not Available939Open in IMG/M
3300019259|Ga0184646_1231536All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300020004|Ga0193755_1192178Not Available589Open in IMG/M
3300021088|Ga0210404_10135814All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300021090|Ga0210377_10040746All Organisms → cellular organisms → Bacteria → Proteobacteria3261Open in IMG/M
3300021344|Ga0193719_10041149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2002Open in IMG/M
3300021344|Ga0193719_10304067All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300021344|Ga0193719_10374440All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300024330|Ga0137417_1246410All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300025313|Ga0209431_10606442All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300025792|Ga0210143_1023115Not Available1083Open in IMG/M
3300025899|Ga0207642_10362898All Organisms → cellular organisms → Bacteria → Proteobacteria858Open in IMG/M
3300025910|Ga0207684_10718780All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300025917|Ga0207660_10005982All Organisms → cellular organisms → Bacteria → Proteobacteria7901Open in IMG/M
3300025921|Ga0207652_11343645All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300025930|Ga0207701_10641332All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300025959|Ga0210116_1101739All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300026029|Ga0208002_1022746All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300026032|Ga0208419_1005233Not Available1489Open in IMG/M
3300026325|Ga0209152_10146539All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium897Open in IMG/M
3300026331|Ga0209267_1220591All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300026334|Ga0209377_1182044All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300026377|Ga0257171_1017553All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300026480|Ga0257177_1044709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae677Open in IMG/M
3300026499|Ga0257181_1057923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium651Open in IMG/M
3300026548|Ga0209161_10199634All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300027378|Ga0209981_1082942All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300027448|Ga0207446_101653All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300027462|Ga0210000_1048579All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300027471|Ga0209995_1007802All Organisms → cellular organisms → Bacteria1726Open in IMG/M
3300027527|Ga0209684_1011600All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300027654|Ga0209799_1058398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria865Open in IMG/M
3300027654|Ga0209799_1079965All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium737Open in IMG/M
3300027655|Ga0209388_1130327All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300027657|Ga0256865_1164950All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300027873|Ga0209814_10068557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1489Open in IMG/M
3300027874|Ga0209465_10034779Not Available2382Open in IMG/M
3300027880|Ga0209481_10456229All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300027882|Ga0209590_10371839All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300028608|Ga0247819_10137044Not Available1265Open in IMG/M
(restricted) 3300031248|Ga0255312_1028226All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300031548|Ga0307408_100594263All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300031564|Ga0318573_10014708All Organisms → cellular organisms → Bacteria → Proteobacteria3407Open in IMG/M
3300031564|Ga0318573_10017339All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3182Open in IMG/M
3300031640|Ga0318555_10018360All Organisms → cellular organisms → Bacteria → Proteobacteria3249Open in IMG/M
3300031640|Ga0318555_10447636All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300031720|Ga0307469_10568376Not Available1007Open in IMG/M
3300031720|Ga0307469_11948999All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium569Open in IMG/M
3300031740|Ga0307468_100463513All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300031769|Ga0318526_10432153All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium538Open in IMG/M
3300031805|Ga0318497_10251264All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300031820|Ga0307473_10123539All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300031896|Ga0318551_10404680All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium776Open in IMG/M
3300032012|Ga0310902_10993834All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium582Open in IMG/M
3300032075|Ga0310890_10706977All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium790Open in IMG/M
3300032090|Ga0318518_10055303All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1898Open in IMG/M
3300032174|Ga0307470_10229629All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300032174|Ga0307470_11157367All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria626Open in IMG/M
3300032174|Ga0307470_11290929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium597Open in IMG/M
3300032179|Ga0310889_10036129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1852Open in IMG/M
3300032180|Ga0307471_100078548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2890Open in IMG/M
3300032180|Ga0307471_101141412All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300032180|Ga0307471_102662164All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300032211|Ga0310896_10087864All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300032421|Ga0310812_10149020All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales993Open in IMG/M
3300033550|Ga0247829_11249144All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300033551|Ga0247830_10141032All Organisms → cellular organisms → Bacteria1750Open in IMG/M
3300033551|Ga0247830_10538521Not Available921Open in IMG/M
3300034114|Ga0364938_091732All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300034665|Ga0314787_097753All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium542Open in IMG/M
3300034667|Ga0314792_134613All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium647Open in IMG/M
3300034673|Ga0314798_106183All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium599Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.78%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.11%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.89%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.22%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.22%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.22%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.67%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.67%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.11%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.11%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.11%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.11%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.11%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.11%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.56%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.56%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.56%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.56%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.56%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.56%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.56%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014265Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2EnvironmentalOpen in IMG/M
3300014310Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025959Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026029Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026032Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027378Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027448Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027462Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027471Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027527Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027657Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeqEnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034114Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034667Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034673Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_181364813300000033SoilVTTRGIQVVRGHLAKLPPANALTIEQRRAQYDRAERVFPTPADVKIEQVTAPD
F12B_1001874933300000443SoilVTTRGIQAVRGHLAKLPPASALTIEQRRAQYDRAE
F24TB_1058034353300000550SoilMAERGIHIVRAHLAKLPPSXXXXXXXXRAQYDRAE
JGI1027J12803_10664855913300000955SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFPTPAD
JGI25385J37094_1003886313300002558Grasslands SoilMSDKGIHLVREHLAKLPASNTLTTAQRRAQYERAERVFPTPPDVKVETIAAP
JGI25384J37096_1006427623300002561Grasslands SoilMSDKGIHLVREHLAKLPAPNTLTTAQRRAQYERAERVFPTPPDVKVETIA
Ga0066678_1022087613300005181SoilMSERGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPD
Ga0068993_1007426833300005183Natural And Restored WetlandsMADRGIDVVRAHLAKLPPSDSLTTAERRAQYERAEKAFPTPPDVKVE
Ga0068869_10001099113300005334Miscanthus RhizosphereMADRGIEAVRAHLAKLPPSDTLTVAERRLQYERAERVFPIPP
Ga0070680_10051995713300005336Corn RhizosphereMADRGIDVVRAHLAKLPPSDSLTTAERRAQYERAETVFPTPPEV
Ga0070700_10076014623300005441Corn, Switchgrass And Miscanthus RhizosphereVTTRGIQVVRGHLAKLPPANALTIEQRRAQYDRAERVFPTPADV
Ga0066686_1068688413300005446SoilMTTRGIDAVLAHLAKLPPPESLTLAEQRAQYERAERAFPIPTDVTVER
Ga0066689_1103498323300005447SoilVTERGIHVVREHLAKLPPASSLTTEQRRAQYDRAERAFPTPADVAIERV
Ga0070681_1058952813300005458Corn RhizosphereMSQRGIDVVRAHLAKLPRTDSMTIAERRAQYDRAERVFATPADV
Ga0070706_10202614523300005467Corn, Switchgrass And Miscanthus RhizosphereVSGDGIAVVRAHLAKIPPANTVAERRAQYDRAERVFPMPADVSVKP
Ga0073909_1048814123300005526Surface SoilMSDRGIQAVREHLAKLPPSNTLTIEQRRKQYERAERVFPT
Ga0066707_1001534043300005556SoilMTTRGVDAVLAHLAKLPPQESLTLAEQRAQYERAERAFPVPADVTV
Ga0066707_1093426323300005556SoilMTARGIRAVREHLAKLPPSSSLTLEQRRGQYDRAERVFSTPADVAVEVVK
Ga0066699_1109405323300005561SoilMTARGIRAVREHLAKLPPSSSLTLEQRRGQYDRAERVFPTPADVAVEVVKAP
Ga0068857_10235489813300005577Corn RhizosphereMTARGIDVVRAHLAKLPPSASLSIAERRAQYDRAERVFPTPADV
Ga0068864_10141761423300005618Switchgrass RhizosphereMDKGIDAVRAHLAKLPPSDSMTVAQRRTQYERAEKAFPTPPDVKVEHVT
Ga0068864_10203509013300005618Switchgrass RhizosphereMADRGIEVVHAHLAKLPPADSLTVAERRAQYERAEKVF
Ga0068866_1099413223300005718Miscanthus RhizosphereMSDRGIQAVREHLAKLPPSNTLTIEQRRKQYERAERVFPTPADV
Ga0066903_10350182623300005764Tropical Forest SoilMSARGIDVVRAHLAKIPPATTVAEKRAQYDRAERVFPVPGDVAVKAV
Ga0066903_10683406613300005764Tropical Forest SoilMAERGIEVVRAHLAKLPPADSLTLAERRSQYERAEKVFP
Ga0068860_10050584213300005843Switchgrass RhizosphereMADRGIEVVHAHLAKLPPADSLTVAERRAQYERAE
Ga0070715_1019280513300006163Corn, Switchgrass And Miscanthus RhizosphereMADRGIEVVRAHLAKLPPSDSLTVAERRAQYERAEKVFP
Ga0066665_1003835043300006796SoilMADRGIEVVRAHLAKLPPADSLTLAERRAQYERAEK
Ga0066659_1001738343300006797SoilMSERGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTP
Ga0075430_10125088513300006846Populus RhizosphereMSDKGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTP
Ga0075431_10031564823300006847Populus RhizosphereMTARGIKVVREHLAKHPAPADVAEKRAQYDRAERVFKTPADVRVE
Ga0075433_1107577513300006852Populus RhizosphereMSDKGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPD
Ga0075433_1120496223300006852Populus RhizosphereMADRGIEVVRAHLAKLPPSDSLTIAERRAQYERAEKAFPIPPEVKVER
Ga0075420_10044331723300006853Populus RhizosphereMPAMSDKGIHVVREHLAKLPPSNTLTIAERRAQYERAERIFPTPPDVKVET
Ga0075425_10057778313300006854Populus RhizosphereVIDRGIGAVRAHLAKLPPSDSLTIAERRAQYERAERVFPIPLDV
Ga0075434_10071958633300006871Populus RhizosphereMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFATPADVAIEV
Ga0075429_10049393533300006880Populus RhizosphereMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAERVFTTP
Ga0079215_1093407413300006894Agricultural SoilMSDRGIHFVREHLAKLPPSSTLTLEQRRAQYERAERVFPTPADVAVE
Ga0075424_10025321313300006904Populus RhizosphereVTTRGIQAVRGHLAKLPPASALTIEQRRAQYDRAERVFPTPADVRIE
Ga0079219_1081575223300006954Agricultural SoilMSDKGIHLVREHLAKLPPSNTLTIAQRRAQYERAERAFPTPPD
Ga0075435_10187415613300007076Populus RhizosphereMSQRGIDVVRAHLAKLPPTDSMTVAERRAQYDRAERVFVTP
Ga0099791_1022333213300007255Vadose Zone SoilMADRGIDVVRAHLAKLPPSDSLTVAERRAQYERAEKAFPTPAEVKVER
Ga0099830_1080945223300009088Vadose Zone SoilMADRGIDVVRAHLAKLPPSDSLTTAERRAQYERAEKVF
Ga0099828_1150211813300009089Vadose Zone SoilMTDRGIHVVREHLAKLPPSATLSIEQRRAQNDRAERVFATPDDVSREP
Ga0099827_1174588013300009090Vadose Zone SoilMADRGIDVVRAHLAKLPPSDSLTVAERRAQYERAEKAFPT
Ga0111539_1146445423300009094Populus RhizosphereMDKGIDAVRAHLAKLPPSDSMTVAQRRTQYERAEKAFPTP
Ga0075418_1105572513300009100Populus RhizosphereMTARGIDIVRAHLAKLPPSGSLTIPERRAQYDRAERVFPTPADVVVET
Ga0075418_1141212723300009100Populus RhizosphereVRGHLARLPPANALTIEQRRAQYDRAERVFPTPADVKIEQV
Ga0114129_1091519623300009147Populus RhizosphereVRGHLAKLPPANALTIEQRRAQYDRAERVFPTPADVKIEQVTA
Ga0111538_1150549913300009156Populus RhizosphereMDKGIDAVRAHLAKLPPSDSMTVAQRRTQYERAEKAFPTPSDVKVEHVT
Ga0075423_1211155123300009162Populus RhizosphereMSDKGIHLVREHLAKLPPSNTLTIAQRRAQYERAERVFP
Ga0075423_1236236923300009162Populus RhizosphereVRGHLAKLPPASALTIEQRRAQYDRAERVFPTPADVRIE
Ga0105241_1077203223300009174Corn RhizosphereMSDRGIQAVREHLAKLPPSNTLTIEQRRMQYERAERVFPTPA
Ga0105248_1246537413300009177Switchgrass RhizosphereMADRGIEVVHAHLAKLPPADSLTVAERRAQYERAEKVFPVSPDVK
Ga0105082_112628513300009814Groundwater SandVTNRGIHAVREHLAKLPPSNTLTIEQRRAQYDRAERVFPTP
Ga0105074_105110813300010029Groundwater SandMADRGIQIVREHLAKLPPSSSLTTEQRRAQYDRAERVFP
Ga0126380_1161355213300010043Tropical Forest SoilMSDRGIQAVREHLAKLPPSNTLTIEQRRAQYERAER
Ga0127503_1092541923300010154SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFATPADV
Ga0134070_1000079713300010301Grasslands SoilMSDKGIHLVREHLAKLPAPNTLTTAQRRAQYERAERVFPTP
Ga0134064_1049978723300010325Grasslands SoilVIDRGIGAVRAHLAKLPPSDSLTIAERRAQYERAERVFPVPVDV
Ga0126370_1182680023300010358Tropical Forest SoilMADRGIDVVRAHLAKLPPPESLTTAERRAQYERAEKV
Ga0126376_1083057223300010359Tropical Forest SoilMNDKGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKIETITAPA
Ga0126376_1151852223300010359Tropical Forest SoilMSDRGIQAVREHLAKLPPSNTLTIEQRRSQYERAERVLPTP
Ga0126372_1082397123300010360Tropical Forest SoilMAERGIDVVRAHLAKLPPPESLTIAERRAQYERAEKVFPTPPEVK
Ga0126378_1096440723300010361Tropical Forest SoilMADRGIEIVRAHLAKLPPTESMTIAEQRAQYERAERAFPIPP
Ga0126378_1114679423300010361Tropical Forest SoilMAERGIDVVRAHLAKLPPPESLTIAERRAQYERAEKVFPTPPEVKIERVT
Ga0126377_1294968613300010362Tropical Forest SoilMNDKGIHLVRDHLAKLPPSNTLTIEQRRAQYERAERV
Ga0134124_1002169813300010397Terrestrial SoilMTARGIRAVRDHLAKLPPSSSLTLVERRAQYDRAERVFATPADVAIEVV
Ga0124844_109187623300010868Tropical Forest SoilMAERGIGVVRAHLAKLPPPESLTIAERRAQYERAEKVFPTPLEVKI
Ga0137393_1044463113300011271Vadose Zone SoilMNDHGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKVETIAAP
Ga0137389_1105012523300012096Vadose Zone SoilMADRGIDVVRAHLAKLPLSDSLTVAERRTQYERAEKA
Ga0137363_1045160513300012202Vadose Zone SoilMAERGIHIVREHLAKLPPSDSLTIAERRAQYERAEKVFPT
Ga0137362_1067331313300012205Vadose Zone SoilMNDHGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKVET
Ga0137362_1142910313300012205Vadose Zone SoilMSERGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKVET
Ga0137381_1005196513300012207Vadose Zone SoilMADRGIEVVRAHLAKLPPADSLTLAERRAQYERAEKVF
Ga0137381_1145488223300012207Vadose Zone SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFPTPADVAI
Ga0137386_1004214653300012351Vadose Zone SoilMSDKGIHLVREHLAKLPAPNTLTTAQRRAQYERAERV
Ga0137386_1042470823300012351Vadose Zone SoilLAKLPPSSALTIEQRRAQYDRAERVFPTPADVAIEIVKAPQ
Ga0137361_1169241823300012362Vadose Zone SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFPTPADVAIE
Ga0137397_1024563733300012685Vadose Zone SoilMADRGIDAVRAHLAKLPPSDSLTTAERRAQYERAEKVFPTPSDV
Ga0137394_1027287513300012922Vadose Zone SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERV
Ga0137394_1041783213300012922Vadose Zone SoilMSDRGIQAVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPADVTIDRVTA
Ga0126369_1286638513300012971Tropical Forest SoilMNDKGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKIETLAA
Ga0126369_1314939623300012971Tropical Forest SoilMAERGIDVVRTHLAKLPPPESLTIAERRAQYERAEKVFPTPPEVKIER
Ga0134110_1037487823300012975Grasslands SoilMTQHGIEAVLAHLAKLPPPGSLTLAEQRAQYERAERAFQIP
Ga0163162_1270874113300013306Switchgrass RhizosphereMAERGIHIVREHLAKLPPSDSLTIAERRAQYERAEKV
Ga0134081_1014327533300014150Grasslands SoilMTARGIRAVREHLAKLPPSSSLTLEQRRGQYDRAER
Ga0075312_106981023300014254Natural And Restored WetlandsMTTRGIDVVRAHLAKLPPSASLTIAERRAQYDRAERVFPTPAD
Ga0075314_114737723300014265Natural And Restored WetlandsMRAMSDRGIHLVREHLAKLPPSSTLTIAQLRAQYDRA
Ga0075331_114206113300014310Natural And Restored WetlandsMTTRGIDVVRAHLAKLPPSASLTIAERRAQYERAERVFPTPADVAVEVVA
Ga0157380_1068029013300014326Switchgrass RhizosphereMSDRGIQAVREHLAKLPPSNTLTIEQRRKQYERAERVFPTPADVTIDRV
Ga0157380_1088138523300014326Switchgrass RhizosphereMTARGIKVVREHLAKHPAPADVAARREQYDRAERVFKTP
Ga0137420_145463623300015054Vadose Zone SoilMNDQGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTRRT*
Ga0137418_1097478713300015241Vadose Zone SoilMSARGIQAVREHLAKLPPASSLTTEQRRAQYDRAER
Ga0137403_1159903923300015264Vadose Zone SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFPTP
Ga0132256_10110619513300015372Arabidopsis RhizosphereMADRGIDVVRAHLAKLPPSETLTTAERRAQYERAEKAFP
Ga0132257_10117347123300015373Arabidopsis RhizosphereMADRGIDVVRAHLAKLPPSETLTTAERRAQYERAEKAF
Ga0132257_10317596923300015373Arabidopsis RhizosphereMTARGIRAVRDHLAKLPPSSSLTLSERRAQYDRAERVFPT
Ga0132255_10070246713300015374Arabidopsis RhizosphereMSDRGIQAVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPADV
Ga0182032_1152666813300016357SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFQTP
Ga0182038_1076007923300016445SoilMADRGIDVVRAHLAKLPPSESLTTAERRAQYERAEKVFPTPAEVKVERVT
Ga0184610_106616033300017997Groundwater SedimentVTERGIHVVREHLAKLPPASSLSTEQRRAQYDRAERVF
Ga0184623_1014157133300018056Groundwater SedimentVTERGIHVVREHLAKLPPASSLSTEQRRAQYDRAERVFP
Ga0187774_1102936313300018089Tropical PeatlandMADRGIDLVRAHLAKLPSSETMTTAERRAQYERAEKVFPTPPE
Ga0190265_1151250813300018422SoilVSGGGIALVRAHLAKLPPVTTVAERRAQYDRAERVFPMPADVS
Ga0190265_1294761423300018422SoilVITRGIAVVRAHLAKLPPSDTLTLAERRRQYERAERVFPIAADVKV
Ga0190272_1063466613300018429SoilMADRGIDVVRAHLAKLPPSDSLTIAERRAQYERAEKVFPTPPDVKVERVNV
Ga0066667_1049442913300018433Grasslands SoilMTQHGIEAVLAHLAKLPPPGSLTLAEQRAQYERAERAFPIPPEVAVR
Ga0066662_1075195823300018468Grasslands SoilMSERGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKVETI
Ga0184646_123153613300019259Groundwater SedimentMADRGIDVVRAHLAKLPPSDSLTTAEHRAQYERAEKVFPTPPDVKVER
Ga0193755_119217823300020004SoilMSDRGIQAVREHLAKLPPSNTLTIEQRRSQYERAER
Ga0210404_1013581433300021088SoilMADRGIEAVRAHLAKLPPSDSLTVAERRAQYERAEKVFPTPAEVKV
Ga0210377_1004074643300021090Groundwater SedimentMPPHGIAAVRAHLAKLPPTETIAERRAMYDRAERVF
Ga0193719_1004114913300021344SoilVSEGGGIAAVRAHLAKIPPANTVAERRAQYDRAERVFPMPADVSVKPV
Ga0193719_1030406713300021344SoilMSGGGIAAVRAHLAKIPPANTVAERRAQYDRAERVFPMPADVSVKPV
Ga0193719_1037444013300021344SoilMADRGIEVVRAHLAKLPPPDSLTIAERRAQYERAEKV
Ga0137417_124641023300024330Vadose Zone SoilMSDQGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPT
Ga0209431_1060644213300025313SoilMTARGIDVVRAHLAKLPPSASLTIAERRAQYDRAERV
Ga0210143_102311513300025792Natural And Restored WetlandsMRAMSDRGIHLVREHLAKLPPSSTLTIAQLRAQYDRAERAFPTPPDVTVEVVAA
Ga0207642_1036289833300025899Miscanthus RhizosphereMSQRGIDVVRAHLAKLPRTDSMTVAERRAQYDRAERVFVTPADVAVERV
Ga0207684_1071878013300025910Corn, Switchgrass And Miscanthus RhizosphereMAERGIHIVRAHLAKLPPSESLTIAERRAQYERAEKAFPTPAEVK
Ga0207660_1000598283300025917Corn RhizosphereMADRGIEAVRAHLAKLPLSDTLTVAERRLQYERAE
Ga0207652_1134364513300025921Corn RhizosphereMSGIAVVRAHLAKIPPANTVAERRAQYDRAERVFPMPADV
Ga0207701_1064133213300025930Corn, Switchgrass And Miscanthus RhizosphereVTTRGIQVVRGHLAKLPPANALTIEQRRAQYDRAERVFPTPA
Ga0210116_110173913300025959Natural And Restored WetlandsMIARGIEVVRAHLAKLPPSASLSIAERRAQYDRAERVFPTPDDVARRGEHA
Ga0208002_102274613300026029Natural And Restored WetlandsMRAMSDKGIHLVRAHLAKLPPSSTLTIAQLRAQYDRAERAFPAPP
Ga0208419_100523313300026032Natural And Restored WetlandsMRAMSDKGIHLVRAHLAKLPPSSTLTIAQLRAQYDRAERAFPTPPD
Ga0209152_1014653923300026325SoilMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAERVFSTPADVAVEV
Ga0209267_122059123300026331SoilMSDKGIHLVREHLAKLPAPNTLTTAQRRAQYERAERVFPTPPDVKVET
Ga0209377_118204413300026334SoilVTERGIRVVREHLAKLPPSSTLTIEQRRAQYDRAERVFPTPADVAIET
Ga0257171_101755313300026377SoilMADRGIDVVRAHLAKLPPSDSLTVAERRAQYERAEKAFPTPAEVKVERVS
Ga0257177_104470913300026480SoilMADRGIDVVRAHLAKLPPSDSLTTAERRAQYERAEKVFPTPPDVKVER
Ga0257181_105792313300026499SoilMADRGIDVVRAHLAKLPPSDSLTTAERRAQYERAEKVFPTPPD
Ga0209161_1019963423300026548SoilVIDRGIGAVRAHLAKLPPSDSLTIAERRAQYERAERVFPVPLDVKVE
Ga0209981_108294213300027378Arabidopsis Thaliana RhizosphereMADRGIDVVRAHLAKLPPSETLTTAERRTQYERAEK
Ga0207446_10165313300027448SoilMTARGIDVVRAHLAKLPPSASLSIAERRAQYDRAE
Ga0210000_104857913300027462Arabidopsis Thaliana RhizosphereMADRGIDVVRAHLAKLPPSETLTTAERRTQYERAEKVFPTP
Ga0209995_100780233300027471Arabidopsis Thaliana RhizosphereMADRGIDVVRAHLAKLPPSETLTTAERRTQYERAEKVFPTPAEVK
Ga0209684_101160013300027527Tropical Forest SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFATPSD
Ga0209799_105839833300027654Tropical Forest SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFPTPS
Ga0209799_107996513300027654Tropical Forest SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVF
Ga0209388_113032713300027655Vadose Zone SoilMADRGIDVVRAHLAKLPPSDSLTVAERRAQYERAEKAFPTPAEVKVERV
Ga0256865_116495013300027657SoilMADRGIAVVRAHLAKLPPSASLTIAERRAQYDRAERVFPT
Ga0209814_1006855713300027873Populus RhizosphereMTDRGIDVVRSHLATLPPSASMTIPERRAQYERAERVFP
Ga0209465_1003477913300027874Tropical Forest SoilMAERGIDVVRTHLAKLPPPESLTIAERRAQYERAE
Ga0209481_1045622913300027880Populus RhizosphereMTARGIKVVREHLAKHPAPADVAEKRAQYDRAERVFKTPADVR
Ga0209590_1037183923300027882Vadose Zone SoilVIDRGIGAVRAHLAKLPPSDSLTIAERRAQYERAERVFPIPLDVK
Ga0247819_1013704433300028608SoilMSDRGIQVVREHLAKLPPSNTLTIEQRRSQYERAERVFPTPADV
(restricted) Ga0255312_102822613300031248Sandy SoilMAEHGIDVVRAHLAKLPPSDSLTVAERRAQYERAEK
Ga0307408_10059426313300031548RhizosphereMNDRGIHVVRAHLAKLPPPTSLTIAERRAQYDKAERVFRTPPDVKVERVE
Ga0318573_1001470863300031564SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFATPSDVSVEIAQTPD
Ga0318573_1001733913300031564SoilMADRGIDVVRAHLAKLPPSESLTTAERRAQYERAEKVFPTRAE
Ga0318555_1001836053300031640SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFATPSDVSVEI
Ga0318555_1044763633300031640SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFQTPADVVIEVVK
Ga0307469_1056837623300031720Hardwood Forest SoilMADRGIDVVRAHLAKLPPSDSLTVAERRAQYERAEKAFP
Ga0307469_1194899923300031720Hardwood Forest SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFPTPADVA
Ga0307468_10046351313300031740Hardwood Forest SoilMSDRGIQVVREPLAKLPPSYTLTIEQRRSQYERAERV
Ga0318526_1043215333300031769SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFQTPADVVIE
Ga0318497_1025126413300031805SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFQTPADVAI
Ga0307473_1012353933300031820Hardwood Forest SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFPTPADVTVETVQ
Ga0318551_1040468013300031896SoilMTARGIRAVRDHLAKLPPSSSLTLAERRAQYDRAERVFQTPADVAIEAVK
Ga0310902_1099383413300032012SoilMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAERVFTTPP
Ga0310890_1070697713300032075SoilMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAEHVF
Ga0318518_1005530313300032090SoilMTARGIRAVREHLAKLPPSSSLTLAERRAQYDRAERVFATPSDVS
Ga0307470_1022962923300032174Hardwood Forest SoilVATRGIQAVRGHLAKLPPANALTIEQRRAQYDRAERVFP
Ga0307470_1115736723300032174Hardwood Forest SoilMAERGIHIVRAHLAKLPPSESLTIAERRAQYERAE
Ga0307470_1129092933300032174Hardwood Forest SoilMAERGIHIVREHLAKLPPSDSLTIAERRAQYERAEKVFPTPAE
Ga0310889_1003612933300032179SoilMTARGIDVVRAHLAKLPPSASLSIAERRAQYDRAERVFPTPADVKVETVT
Ga0307471_10007854813300032180Hardwood Forest SoilMADRGIDVVRAHLAKLPPSDSLTTAERRAQYERAEKVFPTPAEVKVERVN
Ga0307471_10114141223300032180Hardwood Forest SoilVTTRGIQAVRGHLAKLPPASALTIEQRRAQYDRAERVFPTPADVRIELVAAPD
Ga0307471_10266216413300032180Hardwood Forest SoilMRAMSDKGIQLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKVETIAA
Ga0310896_1008786433300032211SoilMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAERVFTTPSDVAVELVK
Ga0310812_1014902033300032421SoilMSDKGIHLVREHLAKLPPSNTLTIEQRRAQYERAERVFPTPPDVKIETIAA
Ga0247829_1124914413300033550SoilMTERGIEAVRQHLAKLPPSSSLTVAQRRAQYERAERVFPT
Ga0247830_1014103233300033551SoilMADRGIDAVRAHLAKLPPSDSLTTAERRAQYERAETVFPTPPEVKV
Ga0247830_1053852113300033551SoilMTDKGIHFVRAHLARLPPSNTLTLAERRAHEVNALV
Ga0364938_091732_468_5783300034114SedimentMTDRGIDVVRAHLAKLPPSASMTIAERRAQYDRAERV
Ga0314787_097753_1_1563300034665SoilMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAERVFTTPPDVAVELVKAP
Ga0314792_134613_500_6463300034667SoilMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAERVFTTPPDVAVELV
Ga0314798_106183_3_1433300034673SoilMTARGIRAVREHLAKLPPSSSLTLEQRRSQYDRAERVFTTPSDVAVE


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