Metagenome / Metatranscriptome Family F032325

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032325
Family Type	Metagenome / Metatranscriptome
Number of Sequences	180
Average Sequence Length	68 residues
Representative Sequence	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDCGVTLHEIQAKADQVGWVVAIEHLHKEREGRTG
Number of Associated Samples	73
Number of Associated Scaffolds	180

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.89 %
% of genes near scaffold ends (potentially truncated)	18.33 %
% of genes from short scaffolds (< 2000 bps)	77.78 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.778 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (26.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (32.222 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.54% β-sheet: 21.87% Coil/Unstructured: 64.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 180 Family Scaffolds
PF01361	Tautomerase	6.11
PF01464	SLT	3.33
PF03401	TctC	1.67
PF13458	Peripla_BP_6	1.67
PF01314	AFOR_C	1.67
PF04055	Radical_SAM	1.11
PF00005	ABC_tran	1.11
PF02915	Rubrerythrin	1.11
PF01797	Y1_Tnp	1.11
PF06808	DctM	0.56
PF07689	KaiB	0.56
PF13401	AAA_22	0.56
PF04140	ICMT	0.56
PF01970	TctA	0.56
PF02653	BPD_transp_2	0.56
PF04909	Amidohydro_2	0.56
PF01799	Fer2_2	0.56
PF02518	HATPase_c	0.56
PF13098	Thioredoxin_2	0.56
PF07883	Cupin_2	0.56
PF08530	PepX_C	0.56
PF13193	AMP-binding_C	0.56
PF02978	SRP_SPB	0.56
PF02371	Transposase_20	0.56
PF08309	LVIVD	0.56
PF00011	HSP20	0.56
PF13247	Fer4_11	0.56
PF01040	UbiA	0.56
PF14827	dCache_3	0.56
PF13412	HTH_24	0.56
PF13462	Thioredoxin_4	0.56
PF02737	3HCDH_N	0.56
PF00682	HMGL-like	0.56
PF13426	PAS_9	0.56
PF00196	GerE	0.56
PF00072	Response_reg	0.56

COG ID	Name	Functional Category	% Frequency in 180 Family Scaffolds
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	6.11
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.67
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	1.67
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.11
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.56
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.56
COG3333	TctA family transporter	General function prediction only [R]	0.56
COG2936	Predicted acyl esterase	General function prediction only [R]	0.56
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.56
COG1784	TctA family transporter	General function prediction only [R]	0.56
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.56
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.56
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.56
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.56
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
All Organisms	root	All Organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
cellular organisms	root	All Organisms → cellular organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	17.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.56 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	17.22 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.67 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	0.56 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.33 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.67 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.11 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	1.11 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.56 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.78 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	1.67 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.11 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	1.11 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.56 %
Deltaproteobacteria bacterium RBG_16_48_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	0.56 %
Holophaga	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.78 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	1.67 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	1.11 %
Pseudodesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Pseudodesulfovibrio	1.11 %
Holophaga foetida	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	0.56 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.56 %
Deltaproteobacteria bacterium RBG_16_48_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.78 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	1.67 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1.11 %
unclassified Pseudodesulfovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Pseudodesulfovibrio → unclassified Pseudodesulfovibrio	1.11 %
Holophaga foetida	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	0.56 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.56 %
Deltaproteobacteria bacterium RBG_16_48_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.78 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	1.67 %
Pseudodesulfovibrio sp. JC047	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Pseudodesulfovibrio → unclassified Pseudodesulfovibrio → Pseudodesulfovibrio sp. JC047	1.11 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1.11 %
Holophaga foetida	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	0.56 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.56 %
Deltaproteobacteria bacterium RBG_16_48_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	0.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_107935590	Not Available	1480	Open in IMG/M
3300004481\|Ga0069718_15934674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	4069	Open in IMG/M
3300006224\|Ga0079037_100011772	All Organisms → cellular organisms → Bacteria	5752	Open in IMG/M
3300006224\|Ga0079037_100067788	All Organisms → cellular organisms → Bacteria	2873	Open in IMG/M
3300006224\|Ga0079037_100197772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1802	Open in IMG/M
3300006224\|Ga0079037_100219078	Not Available	1721	Open in IMG/M
3300006224\|Ga0079037_100333686	Not Available	1417	Open in IMG/M
3300006224\|Ga0079037_100671270	Not Available	1010	Open in IMG/M
3300006224\|Ga0079037_102177018	Not Available	554	Open in IMG/M
3300006930\|Ga0079303_10485795	Not Available	532	Open in IMG/M
3300009037\|Ga0105093_10912433	Not Available	517	Open in IMG/M
3300009053\|Ga0105095_10142459	Not Available	1306	Open in IMG/M
3300009053\|Ga0105095_10206376	Not Available	1076	Open in IMG/M
3300009053\|Ga0105095_10282013	Not Available	913	Open in IMG/M
3300009053\|Ga0105095_10534494	Not Available	651	Open in IMG/M
3300009053\|Ga0105095_10657133	Not Available	584	Open in IMG/M
3300009053\|Ga0105095_10684728	Not Available	572	Open in IMG/M
3300009078\|Ga0105106_11008215	Not Available	592	Open in IMG/M
3300009087\|Ga0105107_10157622	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300009091\|Ga0102851_10182030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1950	Open in IMG/M
3300009091\|Ga0102851_10257707	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300009091\|Ga0102851_11239182	Not Available	822	Open in IMG/M
3300009091\|Ga0102851_12185833	Not Available	630	Open in IMG/M
3300009091\|Ga0102851_13454672	Not Available	507	Open in IMG/M
3300009111\|Ga0115026_10525712	Not Available	884	Open in IMG/M
3300009131\|Ga0115027_10197515	Not Available	1278	Open in IMG/M
3300009153\|Ga0105094_10556257	Not Available	669	Open in IMG/M
3300009166\|Ga0105100_10630913	Not Available	658	Open in IMG/M
3300009171\|Ga0105101_10159316	Not Available	1094	Open in IMG/M
3300009171\|Ga0105101_10288540	Not Available	793	Open in IMG/M
3300009179\|Ga0115028_10252844	Not Available	1153	Open in IMG/M
3300010391\|Ga0136847_11313777	All Organisms → cellular organisms → Bacteria	5625	Open in IMG/M
3300012931\|Ga0153915_10101013	All Organisms → cellular organisms → Bacteria	3063	Open in IMG/M
3300012931\|Ga0153915_10163480	Not Available	2421	Open in IMG/M
3300012931\|Ga0153915_10257806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1934	Open in IMG/M
3300012931\|Ga0153915_10347410	All Organisms → cellular organisms → Bacteria → Proteobacteria	1668	Open in IMG/M
3300012931\|Ga0153915_10364703	All Organisms → cellular organisms → Bacteria → Nitrospirae	1628	Open in IMG/M
3300012931\|Ga0153915_10374059	Not Available	1607	Open in IMG/M
3300012931\|Ga0153915_10423090	Not Available	1511	Open in IMG/M
3300012931\|Ga0153915_10436424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1488	Open in IMG/M
3300012931\|Ga0153915_10451400	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1463	Open in IMG/M
3300012931\|Ga0153915_10496215	Not Available	1395	Open in IMG/M
3300012931\|Ga0153915_10534721	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300012931\|Ga0153915_10654892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1211	Open in IMG/M
3300012931\|Ga0153915_10907330	Not Available	1024	Open in IMG/M
3300012931\|Ga0153915_11058991	Not Available	946	Open in IMG/M
3300012931\|Ga0153915_11248955	Not Available	868	Open in IMG/M
3300012931\|Ga0153915_11883868	Not Available	700	Open in IMG/M
3300012931\|Ga0153915_11945914	Not Available	688	Open in IMG/M
3300012931\|Ga0153915_11952496	Not Available	687	Open in IMG/M
3300012931\|Ga0153915_12349040	Not Available	624	Open in IMG/M
3300012931\|Ga0153915_12717475	Not Available	578	Open in IMG/M
3300012964\|Ga0153916_10089416	All Organisms → cellular organisms → Bacteria → Proteobacteria	2888	Open in IMG/M
3300012964\|Ga0153916_10447333	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300012964\|Ga0153916_10474089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1320	Open in IMG/M
3300012964\|Ga0153916_10771440	Not Available	1041	Open in IMG/M
3300012964\|Ga0153916_11054886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	893	Open in IMG/M
3300012964\|Ga0153916_11055600	Not Available	893	Open in IMG/M
3300012964\|Ga0153916_11188666	Not Available	841	Open in IMG/M
3300012964\|Ga0153916_11216608	Not Available	832	Open in IMG/M
3300012964\|Ga0153916_11337739	Not Available	793	Open in IMG/M
3300012964\|Ga0153916_11455209	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300012964\|Ga0153916_11502366	Not Available	749	Open in IMG/M
3300012964\|Ga0153916_11546342	Not Available	738	Open in IMG/M
3300012964\|Ga0153916_13187313	Not Available	516	Open in IMG/M
3300017939\|Ga0187775_10358512	Not Available	592	Open in IMG/M
3300017944\|Ga0187786_10044522	Not Available	1310	Open in IMG/M
3300017944\|Ga0187786_10117285	Not Available	920	Open in IMG/M
3300017959\|Ga0187779_10500079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Pseudodesulfovibrio → unclassified Pseudodesulfovibrio → Pseudodesulfovibrio sp. JC047	804	Open in IMG/M
3300017961\|Ga0187778_10124199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1616	Open in IMG/M
3300017966\|Ga0187776_10043178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2545	Open in IMG/M
3300017966\|Ga0187776_10085560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1853	Open in IMG/M
3300017966\|Ga0187776_10145853	Not Available	1451	Open in IMG/M
3300017966\|Ga0187776_10298576	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300017966\|Ga0187776_10337935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	990	Open in IMG/M
3300017966\|Ga0187776_10426005	Not Available	893	Open in IMG/M
3300017966\|Ga0187776_10463235	Not Available	860	Open in IMG/M
3300017973\|Ga0187780_10063000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2554	Open in IMG/M
3300017973\|Ga0187780_10260266	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300017973\|Ga0187780_10824092	Not Available	672	Open in IMG/M
3300017973\|Ga0187780_11445415	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300018029\|Ga0187787_10159052	Not Available	772	Open in IMG/M
3300018029\|Ga0187787_10233527	Not Available	664	Open in IMG/M
3300018032\|Ga0187788_10065059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1263	Open in IMG/M
3300018055\|Ga0184616_10001204	All Organisms → cellular organisms → Bacteria → Proteobacteria	5926	Open in IMG/M
3300018058\|Ga0187766_10422358	Not Available	885	Open in IMG/M
3300018062\|Ga0187784_10163241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1819	Open in IMG/M
3300018064\|Ga0187773_10101523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1418	Open in IMG/M
3300018064\|Ga0187773_10124021	Not Available	1303	Open in IMG/M
3300018064\|Ga0187773_10321173	Not Available	871	Open in IMG/M
3300018064\|Ga0187773_10465744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	746	Open in IMG/M
3300018064\|Ga0187773_10488534	Not Available	732	Open in IMG/M
3300018068\|Ga0184636_1059750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Holophaga → Holophaga foetida	1262	Open in IMG/M
3300018085\|Ga0187772_10084539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2018	Open in IMG/M
3300018086\|Ga0187769_10003319	All Organisms → cellular organisms → Bacteria	9612	Open in IMG/M
3300018088\|Ga0187771_10048706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3294	Open in IMG/M
3300018088\|Ga0187771_10169910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1800	Open in IMG/M
3300018089\|Ga0187774_10071710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1618	Open in IMG/M
3300018089\|Ga0187774_10085481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1515	Open in IMG/M
3300018089\|Ga0187774_10257235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	992	Open in IMG/M
3300018089\|Ga0187774_11239941	Not Available	537	Open in IMG/M
3300019234\|Ga0172288_1124046	Not Available	570	Open in IMG/M
3300019246\|Ga0172287_1518967	Not Available	512	Open in IMG/M
3300019273\|Ga0187794_1086537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Pseudodesulfovibrio → unclassified Pseudodesulfovibrio → Pseudodesulfovibrio sp. JC047	805	Open in IMG/M
3300026464\|Ga0256814_1004644	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300026464\|Ga0256814_1021260	Not Available	716	Open in IMG/M
3300027713\|Ga0209286_1095538	Not Available	1107	Open in IMG/M
3300027723\|Ga0209703_1186449	Not Available	767	Open in IMG/M
3300027731\|Ga0209592_1069785	Not Available	1301	Open in IMG/M
3300027731\|Ga0209592_1107120	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300027740\|Ga0214474_1013169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3304	Open in IMG/M
3300027811\|Ga0256868_10316510	Not Available	641	Open in IMG/M
3300027818\|Ga0209706_10532207	Not Available	534	Open in IMG/M
3300027871\|Ga0209397_10685713	Not Available	514	Open in IMG/M
3300027877\|Ga0209293_10001091	All Organisms → cellular organisms → Bacteria	6125	Open in IMG/M
3300027877\|Ga0209293_10001291	All Organisms → cellular organisms → Bacteria	5814	Open in IMG/M
3300027877\|Ga0209293_10063400	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300027890\|Ga0209496_10592607	Not Available	598	Open in IMG/M
3300027896\|Ga0209777_10680485	Not Available	734	Open in IMG/M
3300027900\|Ga0209253_10629353	Not Available	783	Open in IMG/M
3300030613\|Ga0299915_10195931	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300030613\|Ga0299915_10227381	Not Available	1306	Open in IMG/M
3300031949\|Ga0214473_10172199	All Organisms → cellular organisms → Bacteria → Acidobacteria	2514	Open in IMG/M
3300031949\|Ga0214473_10348972	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300031949\|Ga0214473_11334947	Not Available	734	Open in IMG/M
3300032770\|Ga0335085_10041180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	6334	Open in IMG/M
3300032783\|Ga0335079_10019950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	7681	Open in IMG/M
3300032783\|Ga0335079_10456488	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300032829\|Ga0335070_10001459	All Organisms → cellular organisms → Bacteria	27323	Open in IMG/M
3300032829\|Ga0335070_10387875	Not Available	1338	Open in IMG/M
3300032892\|Ga0335081_10024723	All Organisms → cellular organisms → Bacteria	9710	Open in IMG/M
3300032892\|Ga0335081_10027466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9171	Open in IMG/M
3300033004\|Ga0335084_10001856	All Organisms → cellular organisms → Bacteria → Proteobacteria	20048	Open in IMG/M
3300033004\|Ga0335084_10003773	All Organisms → cellular organisms → Bacteria	14864	Open in IMG/M
3300033004\|Ga0335084_10107407	All Organisms → cellular organisms → Bacteria	2900	Open in IMG/M
3300033004\|Ga0335084_10827689	Not Available	939	Open in IMG/M
3300033402\|Ga0326728_10062086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5153	Open in IMG/M
3300033406\|Ga0316604_10025152	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300033406\|Ga0316604_10229532	Not Available	1005	Open in IMG/M
3300033406\|Ga0316604_10317312	Not Available	850	Open in IMG/M
3300033413\|Ga0316603_10248608	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300033414\|Ga0316619_10180092	Not Available	1495	Open in IMG/M
3300033416\|Ga0316622_101577396	Not Available	766	Open in IMG/M
3300033433\|Ga0326726_10043908	All Organisms → cellular organisms → Bacteria	3907	Open in IMG/M
3300033433\|Ga0326726_10053206	All Organisms → cellular organisms → Bacteria → Proteobacteria	3543	Open in IMG/M
3300033433\|Ga0326726_10055764	All Organisms → cellular organisms → Bacteria	3462	Open in IMG/M
3300033433\|Ga0326726_10112699	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300033433\|Ga0326726_10129390	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2286	Open in IMG/M
3300033433\|Ga0326726_10270856	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300033433\|Ga0326726_11400616	Not Available	680	Open in IMG/M
3300033480\|Ga0316620_10044924	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300033480\|Ga0316620_10077194	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300033480\|Ga0316620_10272165	Not Available	1465	Open in IMG/M
3300033480\|Ga0316620_11205066	Not Available	742	Open in IMG/M
3300033481\|Ga0316600_10435195	Not Available	904	Open in IMG/M
3300033485\|Ga0316626_10000873	All Organisms → cellular organisms → Bacteria	12682	Open in IMG/M
3300033486\|Ga0316624_10000724	All Organisms → cellular organisms → Bacteria	11935	Open in IMG/M
3300033486\|Ga0316624_10002620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	7685	Open in IMG/M
3300033486\|Ga0316624_10006587	All Organisms → cellular organisms → Bacteria	5535	Open in IMG/M
3300033486\|Ga0316624_10155928	Not Available	1710	Open in IMG/M
3300033486\|Ga0316624_10432319	Not Available	1109	Open in IMG/M
3300033486\|Ga0316624_10660859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	916	Open in IMG/M
3300033486\|Ga0316624_10794273	Not Available	840	Open in IMG/M
3300033486\|Ga0316624_11362222	Not Available	649	Open in IMG/M
3300033489\|Ga0299912_10229953	Not Available	1583	Open in IMG/M
3300033489\|Ga0299912_10645225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	830	Open in IMG/M
3300033513\|Ga0316628_100005107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10437	Open in IMG/M
3300033513\|Ga0316628_100258938	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300033513\|Ga0316628_100338869	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300033513\|Ga0316628_101130113	Not Available	1042	Open in IMG/M
3300033513\|Ga0316628_101241825	Not Available	992	Open in IMG/M
3300033513\|Ga0316628_101278661	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300033513\|Ga0316628_101370472	Not Available	942	Open in IMG/M
3300033521\|Ga0316616_100304471	Not Available	1693	Open in IMG/M
3300033557\|Ga0316617_101190835	Not Available	756	Open in IMG/M
3300034089\|Ga0373913_0204881	Not Available	574	Open in IMG/M
3300034090\|Ga0326723_0044425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1872	Open in IMG/M
3300034090\|Ga0326723_0046786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1824	Open in IMG/M
3300034090\|Ga0326723_0146820	Not Available	1035	Open in IMG/M
3300034090\|Ga0326723_0150749	Not Available	1021	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.44%
Engineered	Engineered	0.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.89%
Aquatic	Environmental → Aquatic	45.56%
Bioremediation	Engineered → Bioremediation	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.67%
Freshwater	Environmental → Aquatic → Freshwater	43.89%
Peat	Environmental → Terrestrial → Peat	6.67%
Sediment	Environmental → Aquatic → Sediment	1.11%
Marine	Environmental → Aquatic → Marine	0.56%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.56%
Metal	Engineered → Bioremediation → Metal	0.56%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	41.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	16.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.11%
Lake	Environmental → Aquatic → Freshwater → Lake	0.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.56%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	41.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	25.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	16.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.67%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.11%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.56%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.56%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.56%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	22.22%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	18.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	18.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.00%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	6.67%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	6.67%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.56%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.56%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.56%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.56%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019234	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019246	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034089	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.2	Engineered	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1079355901	3300001213	Wetland	MDYKLLNGKPRATLIQRFDGSAVLLGPKTKKLEFDFGATLHEIQAKADQVGWVVAIEHLHKEREGGIGKKG*
Ga0069718_159346743	3300004481	Sediment	MDYRLLNGKPRATLIQRFDGSAVLIGPEARKLEFDCAVTLHEIQAKADQVGWVVAIEHLHKEREGRTG*
Ga0079037_1000117722	3300006224	Freshwater Wetlands	MNYRLLNGKPRATLIQRFDGSAVLLGPKATRLEFKLGATLHEIQAEAEQVGWVVSVEHLHKEREGTTG*
Ga0079037_1000677882	3300006224	Freshwater Wetlands	VDYRLLNGKPRATLIQRFDGSAFLSGPNATRIEFEIGATIHEIQAKAEELGWVIAIEHLHKEREGNVG*
Ga0079037_1001977722	3300006224	Freshwater Wetlands	VNHRLLNGKPRATLIQRFDGSAFLYGPKAVKIEFTTGTTLHEIQAEAENLGWVIAIEHLHKEREGKIG*
Ga0079037_1002190782	3300006224	Freshwater Wetlands	MDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQAEAELSGWVVAVEHLHKEREGRIG*
Ga0079037_1003336862	3300006224	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKSLKLEFDIGATLHEIQTKADQLGWVVAIEHLHKEREGITG*
Ga0079037_1006712701	3300006224	Freshwater Wetlands	MDFRLLNGKPRATLIQRFDGSAVLLGPKAMKLEFDVGATLHEIQIKADQLGWVVAIEHLHKEREGITG*
Ga0079037_1021770182	3300006224	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAILLGPKGRKLEFDCAATLHEIQAKADQVGWVVAIEHLHKER
Ga0079303_104857951	3300006930	Deep Subsurface	KMDYRLLNGKPRATLIQRFDGSAVLLGPKATKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG*
Ga0105093_109124331	3300009037	Freshwater Sediment	TKMDYRLLNGKPRATLIQRFDGSAVLLGPKERKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG*
Ga0105095_101424594	3300009053	Freshwater Sediment	MDYKLLNGKPRATLIQRFDGSAALLGPKTKKLEFDFGATLHEIQAKADQVGWVVAIEHLHKEREGGIGKKG*
Ga0105095_102063761	3300009053	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKERKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG*
Ga0105095_102820132	3300009053	Freshwater Sediment	MYVTWEMKMDYRLLNGKPRATLIQRFDGTAVLLGPRARRLEFGLGATLHEIQAKAELFGWVVAVEHLHREREGRIG*
Ga0105095_105344942	3300009053	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKATRLEFKLGATLHEIQAEAEQVGWVVAVEHLHKEREGTTG*
Ga0105095_106571331	3300009053	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLREIQAEAELSGWVVAVEHLHKEREGRIG*
Ga0105095_106847281	3300009053	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG*
Ga0105106_110082151	3300009078	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKALKFEFDIGATLREIQTKADQLGWVVAIEHLHKEREGITG*
Ga0105107_101576223	3300009087	Freshwater Sediment	MDYRLFNGKPRATLIQRFDGSSLLFGPNGKTIEFHIGTTVHEIHAEAEKLGWMIAITHLHKEREGRVG*
Ga0102851_101820302	3300009091	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKATKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG*
Ga0102851_102577072	3300009091	Freshwater Wetlands	MKMDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQAEAELSGWVVAVEHLHKEREGRIG*
Ga0102851_112391821	3300009091	Freshwater Wetlands	MDYRLLDGKPRATLIQRFDGTAVLLGPKARRLEFKSGATLHEIQAEAELFGWVVAVEHLHKERERRIG*
Ga0102851_121858331	3300009091	Freshwater Wetlands	VDYRLLNGKPRATLIQRFDGSAFLSGPNATTIEFEIGATIHEIQAKAEELGWVIAIEHLHKEREAKGG*
Ga0102851_134546721	3300009091	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKSLKLEFDIGATLHEIQTKADQLGWVVAIEHLHKEREG
Ga0115026_105257122	3300009111	Wetland	MDYRLLNGKPRATLIQRFDGSAVLLGPEAKKLEFDIGASLHEIQAKADQVGWVVAIEHLHKEREGRTLA*
Ga0115027_101975152	3300009131	Wetland	MNYRFLNGKPRATLIQRFDGSAVLLGPKATRLEFKLGATLHEIQAEAEQVGWVVSVEHLHKEREGTTG*
Ga0105094_105562572	3300009153	Freshwater Sediment	MYVTWEMKMDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLREIQAEAELSGWVVAVEHLHKEREGRIG*
Ga0105100_106309131	3300009166	Freshwater Sediment	MKMDSRLLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLREIQAEAELSGWVVAVEHLHKEREGRIG*
Ga0105101_101593162	3300009171	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDIGATLHEIQIKADQLGWVVAIDHLHKEREGITG*
Ga0105101_102885401	3300009171	Freshwater Sediment	MKMDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLREIQAEAELSGWVVAVEHLHKEREGRIG*
Ga0115028_102528442	3300009179	Wetland	MKMDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQAEAELSGWVVAVEHLHKERERRIG*
Ga0136847_113137772	3300010391	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGTAVLVGPKAKRLEFDFGATLHEIQAKADQVGWVVAIEHLHREREGGTG*
Ga0153915_101010132	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSVVLIGPKTRRLEFESGTTMHEIMAEAELIGWVVAVEHLYKEREGRIG*
Ga0153915_101634801	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGTAVLIGPKARRLEFKLGATLHEIQAEADLVGWVVSVEHLHKEREGSIG*
Ga0153915_102578062	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGTAVLLGPKAKRLEFDFGATLHEIQAKADQVGWVVAIEHLHKEREGGTR*
Ga0153915_103474102	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPNASKLEFDIGATLHEIQAKADKVGWVVAIEHLHKEREGSIG*
Ga0153915_103647031	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPNARKFEFDCGATLHEIQAKADQVGWVVAIEHLHKEREGTIG*
Ga0153915_103740592	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKSRRLEFEFGATLHEIQARAEQIGWVVAVEHLHKERESRTLG*
Ga0153915_104230902	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSVVLLGPKAKKLEFSSSATLHEIQAKAEQVGWVIAIEHLHREREGGTG*
Ga0153915_104364242	3300012931	Freshwater Wetlands	MGKRRMKMDYRLLNGKPRATLIQRFDGSILLLGPKTAKLEFDIGATLHEIQAKADQFGWVIAIEHLHKEREGKIG*
Ga0153915_104514002	3300012931	Freshwater Wetlands	RSMVQWRSKMDYRLLNGKPGATLIQRFDGSAVLLGPKTKRLEFDFGTTLHEIQAKAEQIGWVIAVEHLYKEREGRIG*
Ga0153915_104962151	3300012931	Freshwater Wetlands	RRIKMDYRLLNGKPRATLIQRFDGSAVLLGPEARRLEFKFGATLHEIQAKAEQVGWVVAVEHLHKEREGRTAKGPCTLG*
Ga0153915_105347212	3300012931	Freshwater Wetlands	LKEDIFFPGTRKNLEPFPRNWYRRSKVDYRLFNGNPRATLIQRFDGSSLLFGPNGKKIEFQIGATIHEIQTEAEKFGWMIAIEHLHKERESKVG*
Ga0153915_106548922	3300012931	Freshwater Wetlands	MKMDYRLLNGKPRATLIQRFDGSVLLLGPKTAKLEFDIGATLHEIQAKAEQFGWVIAVEHLHKEREGKIG*
Ga0153915_109073301	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKARRLEFKFGATLHEIQAKAEQVGWVVAVEHLHKEREGRTA*
Ga0153915_110589912	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLVQRFDGSAFLLGPKTRKLEFDIGTTLHEIQIKADELGWVVAIEHLHKEREA*
Ga0153915_112489551	3300012931	Freshwater Wetlands	VDYRLLNGKPRATLIQRFDGSAFLYGPRGTKIEFEIGATLHEIQAKAEHLGWVIAIEHLHKEREGKVG*
Ga0153915_118838682	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDCGATLHEIQAKADQVGWVVAIEHLHKEGEGTTG*
Ga0153915_119459142	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKAKKLEFDIGATLHEIQAKADQVGWMVAIEHLHKEREGR
Ga0153915_119524961	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKERKLEFDIGATLHEIQIEADQLGWVVAIEHLHKEREGITG*
Ga0153915_123490401	3300012931	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDIGATLYEIQAKADQVGWVVAIEHLHKEREGGTG*
Ga0153915_127174751	3300012931	Freshwater Wetlands	DGSALLFGPKGEKIEFAIGATLHEIQDKAEHFGWMVAIEHLHSEREGRVG*
Ga0153916_100894162	3300012964	Freshwater Wetlands	MDYRLLNGKPGATLIQRFDGSAVLLGPKTKRLEFDFGTTLHEIQAKAEQIGWVIAVEHLYKEREGRIG*
Ga0153916_104473332	3300012964	Freshwater Wetlands	MDYRLLNGKPRATLIQKFDGTAVLLGPKAKRVEFDFGATLHEIQAKADQVWWVVAIEHLHKEREGGTR*
Ga0153916_104740891	3300012964	Freshwater Wetlands	MKMDYRLLNGKPRATLIQRFDGSILLLGPKTAKLEFDISATLHEIQAKAEQCGWVIAIEHLHKEREGKIG*
Ga0153916_107714401	3300012964	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGTAVLLGPKAKRLEFDFGATLHEIQAKADQVGWVVAIEHLHKEREGGPG*
Ga0153916_110548862	3300012964	Freshwater Wetlands	MKMDYRLLNGKPRATLIQRFDGSILLLGPKTAKLEFDIGATLHEIQAKADQFGWVIAIEHLHKEREGKIG*
Ga0153916_110556002	3300012964	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKSRRLEFELGATLHEIQARAEQIGWVVAVEHLHKERESRTLG*
Ga0153916_111886662	3300012964	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPEARRLEFKFGATLHEIQAKAEQVGWVVAVEHLHKEREGRTAKGPCTLG*
Ga0153916_112166081	3300012964	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDCGATLYEIQAKADQVGWVVAIEHLHKEREGGTG*
Ga0153916_113377391	3300012964	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSVVLLGPKAKKLEFGSSATLHEIQAKAEQVGWVIAIEHLHREREGGTG*
Ga0153916_114552091	3300012964	Freshwater Wetlands	MDYRLFNGKPKATLIQRFDGSLLLVGPEAKKIEFNLGASLHEVEAKAQDFGWVIAVEHLHREREGRVG*
Ga0153916_115023661	3300012964	Freshwater Wetlands	MDYRLLNGKPRATLIQRFDGSAVLLGPKGRKLEFDIGATLREIQTKADQLGWVVAIEHLHKEREGITG*
Ga0153916_115463421	3300012964	Freshwater Wetlands	RLLNGKPRATLIQRFDGTAVLLGPQARRIEFKLGATLNEIQAKAELFGWVVAVEHLHKEREGRIG*
Ga0153916_131873131	3300012964	Freshwater Wetlands	RLLNGKPRATLIQRFDGSAVLLGPNARKLEFECGATLHEIQAKADQVGWVVAIEHLHKEREGRTG*
Ga0187775_103585121	3300017939	Tropical Peatland	TLIQRFDGTAVLLGPKARRLEFKLGATLHEIQAEAELVGWVVAVEHLCKEREGRAA
Ga0187786_100445221	3300017944	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPRAARLEFDLGATLHEIQAKADQVGWVVAIEHLHREREGKSI
Ga0187786_101172851	3300017944	Tropical Peatland	RATLIQRFDGSAVLLGPKARRLEFSLGATLHEIQAKAELVGWAVAVEHRHKEREGSTG
Ga0187779_105000791	3300017959	Tropical Peatland	EMDYRLLNGKPRATLIQRFDGSAVLLGPNGSKLEFDIGSTLHEIQAKADQVGWVVSIEHLHKEREGRVA
Ga0187778_101241992	3300017961	Tropical Peatland	MDYTLLNGKPRATLIQRFDGSAVLLGPEARKLEFDCGATLHEIQAKADQVGWVVAIEHLNKEREGRTG
Ga0187776_100431783	3300017966	Tropical Peatland	MDYRLLNGKPGATLIQRFDGSSVLLGPEARRFEFECGTTLYEIRDKADQLGWVVAIEHLHKEREGRFSSVRRR
Ga0187776_100855601	3300017966	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPNGSKLEFDIGSTLHEIQAKADQVGWVVSIEHLHKEREGSVA
Ga0187776_101458532	3300017966	Tropical Peatland	MEYYMLLNGKPRATLIQRFDGSAVLLGPKARRLEFSLGATLHEIQAKAELVGWAVAVEHRHKEREGSTG
Ga0187776_102985761	3300017966	Tropical Peatland	MNYRLLNGKPRATLIQRFDGSAVLLGPKSRKLEFDFGATLPEIQARADQIGWVVAIEHLRKEREVRTG
Ga0187776_103379353	3300017966	Tropical Peatland	MDYRLLNGKPKATLIQRFDGSVVLLGPKARKLEFDSSATLHEIQAKAEQMGWAIAIEHLHRERAGGT
Ga0187776_104260052	3300017966	Tropical Peatland	MTDRLHNGKPRATLIQRFDGTAVLLGPKARRLEFKLGATLHEIQAEAELVGWVVAVEHLCKEREGRAA
Ga0187776_104632352	3300017966	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPRARRLEFRTGATLHEIQAEADLVGWVVAVEHLHKEREGSLA
Ga0187780_100630004	3300017973	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPRAKRLEFRTGATLHEIQAEADRVGWVVAVEHLHREREGSIG
Ga0187780_102602661	3300017973	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPNGSKLEFDTGSTLHEIQAKADQVGWVVSIEHLHKEREGRVA
Ga0187780_108240922	3300017973	Tropical Peatland	MDHGLLNGKPRATLIQRFDGSAVLLGPEARKLEFDCGATLHDIQAKADQVGWVVAIEHLNKEREGRTG
Ga0187780_114454151	3300017973	Tropical Peatland	PGMPSIGVLKMDYRLLNGKPRATLIQRFDGSAVLLGPKSKRLEFDFGATLHEIQTKADQIGWVVAIEHLHREREGRTL
Ga0187787_101590521	3300018029	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPNGSKLEFDIGSTLHEIQAKADQVGWVVSIEHLHKERE
Ga0187787_102335272	3300018029	Tropical Peatland	KATTRVREVGGSNKMDYRLLNGKPRATLIQRFDGSALLLGPKERKLEFDIAATLLEIQAKADQVGWVVAIEHLHKEREGSTG
Ga0187788_100650593	3300018032	Tropical Peatland	PRATLIQRFDGSAVLLGPNGSKLEFDIGSTLHEIQAKADQVGWVVSIEHLHKEREGSVA
Ga0184616_100012043	3300018055	Groundwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDCGVTLHEIQAKADQVGWVVAIEHLHKEREGRTG
Ga0187766_104223582	3300018058	Tropical Peatland	MDHGLLNGKPRATLIQRFDGSAVLLGPEARKLEFDCGATLHDIQAKADQVGWVVAIEHLHKEREGRTG
Ga0187784_101632413	3300018062	Tropical Peatland	MNHRLLNGKPRATLIQMFDGSAVLLGPEARKLEFDCSATLREIQAKADQLGWVVAMEHLHMESEGRTGGILLTLE
Ga0187773_101015232	3300018064	Tropical Peatland	MDLRLLSGKPRATLIQRFDGSVVLLGPKARKLEFDSCATLHEIQAKAEQMGWVVAIEHRHKERVGRTG
Ga0187773_101240211	3300018064	Tropical Peatland	MTDRLLNGKPRATLIQRFDGTAVLLGPKARRLEFKLGATLHEIQAEAELVGWVVAVEHLCKEREGRAA
Ga0187773_103211731	3300018064	Tropical Peatland	MGYRLLNGKSRATLIQRFDGTAVLIGPKARRLEFELGVTLHEIQAQADLVGWVVSVEHLQKERESGIG
Ga0187773_104657443	3300018064	Tropical Peatland	MDYRLLNGKPKATLIQRFDGSVVLLGPKARKLEFDASATLYEIQAKAEQMGWAIAIEHLHRERAG
Ga0187773_104885341	3300018064	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPNGSKLEFDTGSTLHEIQAKADQVGWVVSIEHLHKEREGSVA
Ga0184636_10597502	3300018068	Groundwater Sediment	MDYRLLNGKPRATLIQRFDGTAVLVGPKAKRLEFDFGATLHEIQAKADQVGWVVAIEHLHREREGGTG
Ga0187772_100845393	3300018085	Tropical Peatland	MDYGLLNGKPRATLIQRFDGSAVLLGPEARKLEFDCGATLHEIQAKADQVGWAVTIEHLNKEREGRTG
Ga0187769_100033193	3300018086	Tropical Peatland	MDYGLLNGKPRATLIQRFDGSAVLLGPEARKLEFDCGATLHEIQAKADQVGWVVAIEHLNKEREGRTG
Ga0187771_100487064	3300018088	Tropical Peatland	MDYRLLSGKPRATLIQRFDGSAVLLGPEARKLEFDCGATLHEIQAKADQVGWVVVVEHLNKEREGRTG
Ga0187771_101699103	3300018088	Tropical Peatland	MDYGLLNGKPRATLIQRFDGSAVLLGPETRKLEFDCGVTLHEIQAKAAQVGWAVTIEHLNKEREGRTE
Ga0187774_100717103	3300018089	Tropical Peatland	MDLSLLNGKPRATLIQRFDGSVVLLGPKARKLEFDSCATLHEIQAKAEQMGWVVAIEHRHKERGGRTG
Ga0187774_100854813	3300018089	Tropical Peatland	MDYRLLNGKPKATLIQRFDGSVVLLGPKARKLEFDASATLHEIQAKAEQMGWAIAIEHLHRERAGGT
Ga0187774_102572352	3300018089	Tropical Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPKSRKLEFDFGATLPEIQARADQIGWVVAIEHLRKEREVRTG
Ga0187774_112399411	3300018089	Tropical Peatland	MEYYLLLNGKPRATLIQRFDGSAVLLGPRARRLEFRTGATLHEIQAEADLVGWVVAVEHLHKEREGRIGLAPCVFPTPGGMTTQILG
Ga0172288_11240461	3300019234	Wetland	MDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQAEAELSGWVVAVEHLHKEREGRIG
Ga0172287_15189671	3300019246	Wetland	ATMGSPKHGRIKMDYRLLNGKPRATLIQRFDGSAVLLGPKARRLEFEFGATLREIQAKAEQAGWVVAVEHLHKEREGRVA
Ga0187794_10865371	3300019273	Peatland	MDYRLLNGKPRATLIQRFDGSAVLLGPNGSKLEFDSGSTLHEIQAKADQVGWVVSIEHLHKEREGRVA
Ga0256814_10046442	3300026464	Sediment	MDYRLLNGKARATLIQRFDGSAVLLGPRARRLEFRTGATLHEIQAEADLVGWVVAVEHLHREREGSLG
Ga0256814_10212601	3300026464	Sediment	MDYRLLNGKPRATLIQRFDGSAVLVGPNGSKLEFDIGATLHEIQAKADQIGWVVSIEHLHKEREGDVA
Ga0209286_10955382	3300027713	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKATKLEFDIGATLHEIQTKADQLGWVVAIEHLHKEREGITG
Ga0209703_11864492	3300027723	Freshwater Sediment	MYVTWEMKMDYRLLNGKPRATLIQRFDGTAVLLGPRARRLEFGLGATLHEIQAKAELFGWVVAVEHLHREREGRIG
Ga0209592_10697852	3300027731	Freshwater Sediment	MDYKLLNGKPRATLIQRFDGSAALLGPKTKKLEFDFGATLHEIQAKADQVGWVVAIEHLHKEREGGIGKKG
Ga0209592_11071202	3300027731	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKARKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG
Ga0214474_10131691	3300027740	Soil	MDYRLLNGKPRATLIQRFDGSAVLIGPEARKLEFDCAVTLHEIQAKADQVGWVVAIEHLHKEREGRTG
Ga0256868_103165102	3300027811	Soil	MDYRLLNGKPRATLIQRFDGTAVLLGPKEKRLEFDFGATLHEIQAKADQVGWVVAIEHLHKER
Ga0209706_105322071	3300027818	Freshwater Sediment	MDYRLLNGKPRATLIQRFDGSAVLLGPKERKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG
Ga0209397_106857131	3300027871	Wetland	MDYRLLNGKPRATLIQRFDGSAVLLGPKATKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG
Ga0209293_100010913	3300027877	Wetland	MNYRLLNGKPRATLIQRFDGSAVLLGPKATRLEFKLGATLHEIQAEAEQVGWVVSVEHLHKEREGTTG
Ga0209293_100012913	3300027877	Wetland	MDYRLLNGKPRATLIQRFDGSAVLLGPKSLKLEFDIGATLHEIQTKADQLGWVVAIEHLHKEREGITG
Ga0209293_100634003	3300027877	Wetland	GKPRATLIQRFDGSAVLLGPKATKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGIT
Ga0209496_105926072	3300027890	Wetland	MDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQAEAELSGWVVAVEHLH
Ga0209777_106804851	3300027896	Freshwater Lake Sediment	MGYRYLDGKPRATLIQRFDGSTVLLGPKARKLEFDFGATLPEIQAKADQVGWVVGIEHLRKERESTTG
Ga0209253_106293531	3300027900	Freshwater Lake Sediment	MDYRLLNGKPRATLIQRFDGSAILLGPKGRKFEFDCGATLHEIQAKADQVGWVVAIEHLHREREGRTG
Ga0299915_101959312	3300030613	Soil	MDYRLLDGKPRATLIQRFDGSAVLLGPKARRLEFKLGATLHEIQAKAEQVGWVVSVEHLHKERESRAG
Ga0299915_102273812	3300030613	Soil	MDYRLLNGKPRATLIQRFDGSAVLVGPKARRLEFDFGATLHEIQAKADQVGWVVAIEHLHKERESGPE
Ga0214473_101721991	3300031949	Soil	MDYRLLNGKPRATLIQRFDGTAVLLGPKEKRLEFDFGATLHEIQAKADQVGWVVAIEHLHKEREGGTG
Ga0214473_103489721	3300031949	Soil	YRLLNGKPRATLIQRFDGSAVLLGPKAKRLEFDLGATLHEIQAKADQIGWVVAVEHLHKEREGGPGSPWDR
Ga0214473_113349472	3300031949	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGLKSRRLEFKFGATLHEIQAKADQIGWVVAVEHLHREREGGTV
Ga0335085_100411808	3300032770	Soil	MDYRLLNGKARATLIQRFDGSAVLLGPRARRLEFRTGATLHEIQAEADLVGWVVAVEHLHREREDSLG
Ga0335079_100199503	3300032783	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPKSKRLEFDFGATLHEIQTKADQIGWVVAIEHLHREREGRTL
Ga0335079_104564881	3300032783	Soil	NGKPRATLIQRFDGSAVLLGPKAKKLEFDIGATLHEIQEKADQVGWVVAIEHLHREREGRTG
Ga0335070_100014597	3300032829	Soil	MDCRLLNGKPRATLIQRFDGSAVLLGPRARRLEFRTGATLHEIQAEADLVGWVVAVEHLHREREGSLG
Ga0335070_103878752	3300032829	Soil	MDYRLLNGKPRATLIQRFDGSAVLVGPNGSKLEFDIGATLHEIQAKADQIGWVVSIEHLHKEREGRVA
Ga0335081_100247233	3300032892	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPKAKKLEFDIGATLHEIQEKADQVGWVVAIEHLHREREGRTG
Ga0335081_100274662	3300032892	Soil	MGHKSPDGKPRATLIQRFDGSAVLLGPEARKLEFDSSATRHEIQAKADQLGWVVGIEHLHMEREGRTG
Ga0335084_1000185615	3300033004	Soil	MDYRLLNGKARATLIQRFDGSAVLLGPRARRLEFRTGATLHEIQAEADLVGWVVAVEHLHREREGSAG
Ga0335084_100037733	3300033004	Soil	MDYRLLTGKPRATLIQRFDGSAVLLGPRAARLEFDLGATLHEIQAKADQVGWVVAIEHLHREREVNLFKFSSLRDR
Ga0335084_101074075	3300033004	Soil	RATLIQRFDGSAVLLGPRARRLEFRTGATLHEIQAEADLVGWVVAVEHLHREREDSLG
Ga0335084_108276891	3300033004	Soil	MDYRLLNGKPRATLIQRFDGTAVLLGPNGSKLEFDTGSTLHEIQAKADQVGWVVSIEHLHKEREGRVA
Ga0326728_100620865	3300033402	Peat Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPEARKLEFDCGATLHEIQAKADQVGWVVAIEHLNKEREGKTG
Ga0316604_100251524	3300033406	Soil	NGKPRATLIQRFDGSAVLLGPKATRLEFKLGATLHEIQAEAEQVGWVVSVEHLHKEREGTTG
Ga0316604_102295321	3300033406	Soil	MKMDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQTEAELSGWVVAVEHLHKEREGRIG
Ga0316604_103173121	3300033406	Soil	DYRLLNGKPRATLIQRFDGSAVLLGPKATKLEFDIGATLHEIQIKADQLGWVVAIEHLHKEREGITG
Ga0316603_102486083	3300033413	Soil	VDYRLLNGKPRATLIQRFDGSAFLSGPNATRIEFEIGATIHEIQAKAEELGWVIAIEHLHKEREGNVG
Ga0316619_101800923	3300033414	Soil	MKMDYRFLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQAEAELSGWVVAVEHLHKEREGRIG
Ga0316622_1015773961	3300033416	Soil	VNHRLLNGKPRATLIQRFDGSAFLYGPKAVKIEFTTGTTLHEIQAEAENLGWVIAIEHLHKEREGKIG
Ga0326726_100439083	3300033433	Peat Soil	MATLIQRFDGSAVLLGPKSRKLEFDFGATLPEIQAKADQIGWVVAIEHLRKEREVRTG
Ga0326726_100532061	3300033433	Peat Soil	MDYRVLNGKPKATLIQRFDGSAVLLGPKARKLEFDFGATLPEIQAKADQIGWVVAIEHLRKERESTTG
Ga0326726_100557643	3300033433	Peat Soil	MDYRLLNGKPRATLIERFDGSTVLLGPRARKLEFDIGATLHEIQAKADQVGWVVAIEHLHKEREGKIG
Ga0326726_101126992	3300033433	Peat Soil	MDYRLLNGKPRATLIQRFDGSALLLGPKARKLEFDCGATLHEIQAKADQVGWVVAIEHLHKEREGTTG
Ga0326726_101293901	3300033433	Peat Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPNVRKFEFDCGATLHEIQAKADQVGWVVAIEHLQKERECATG
Ga0326726_102708563	3300033433	Peat Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPNARKFEFDCGATLHEIQAKADQVGWVVAIEHLQKE
Ga0326726_114006162	3300033433	Peat Soil	MNYRLLNGKPKATLIQRFDGSAVLLGPKSRKLEFDFGATLPEIQAKADQVGWVVAIEHLRKEREVRTG
Ga0316620_100449244	3300033480	Soil	MDYRLLNGKPRTTLIQRFDGSAVLLGPKSRRLEFEFGATLHEIQARAEQIGWVVAVEHLHKEREGRTLG
Ga0316620_100771941	3300033480	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPEAKKLEFDIGASLHEIQAKADQVGWVVAIEHLHKEREGRTLA
Ga0316620_102721652	3300033480	Soil	MDYRLLDGKPRATLIQRFDGTAVLLGPKTRRLEFKSGATLHEIQAQADLVGWVVAVEHLHKEREGRIG
Ga0316620_112050661	3300033480	Soil	MDYRLLNGKPRATLIQRFDGSVLLLGPKTAKLEFDIGATLHEIQAKAEQFGWVIAVEHLHKEREGKIG
Ga0316600_104351951	3300033481	Soil	MDYRLLDGKPRATLIQRFDGTAVLLGPKARRLEFKSGATLHEIQAEAELFGWVVAVE
Ga0316626_100008731	3300033485	Soil	RLLNGKPRATLIQRFDGSAVLLGPKATRLEFKLGATLHEIQAEAEQVGWVVSVEHLHKEREGTTG
Ga0316624_100007248	3300033486	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPEARKLEFDIGASLHEIQAKADQVGWVVAIEHLHKEREGRTLA
Ga0316624_100026205	3300033486	Soil	MAYRLLDGKPRATLIQRFDGTAVLLGPKTRRLEFKSGATLHEIQAQADLVGWVVAVEHLHKEREGRIG
Ga0316624_100065877	3300033486	Soil	MDYRLLNGKPRATLIQRFDGTAVLLGPKARRLEFRLGATLHEIQAEADFVGWVVAIEHLHKEREGRTG
Ga0316624_101559281	3300033486	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPKARRLEFKFGATLHEIQAKAEQVGWVVAVEHLHKEREGRTA
Ga0316624_104323192	3300033486	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPKARRLEFKFGATLHEIQAKAEQVGWVVAVEHLHMEREGRTA
Ga0316624_106608592	3300033486	Soil	MGQRRMKMDYRLLNGKPRATLIQRFDGSVLLLGPKTAKLEFDIGATLHEIQAKAEQFGWVIAVEHLHKEREGKIG
Ga0316624_107942731	3300033486	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPNARKFEFDRGATLHEIQAKADQVGWVVAIEHLHKEREGTTG
Ga0316624_113622221	3300033486	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPEARKLEFDVGATLHEIQAKADQVGWVVAIEHLHKEREGGPG
Ga0299912_102299532	3300033489	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGLKSRRLEFKFGATLHEIQAKADQIGWVVAVEHLHSEREGGPI
Ga0299912_106452251	3300033489	Soil	MDYRLLNGKPRATLIQRFDGSILLLGPKTAKLEFDIGATLHEIQAKADQFGWVIAIEHLHKEREGKIG
Ga0316628_1000051071	3300033513	Soil	MDYRLLDGKPRATLIQRFDGTAVLLGPKARRLEFKSGATLHEIQAEAELFGWVVAVEHLHKERERRIG
Ga0316628_1002589382	3300033513	Soil	MDFRLLNGKPRATLIQRFDGSAVLLGPKAMKLEFDVGATLHEIQIKADQLGWVVAIEHLHKEREGITG
Ga0316628_1003388691	3300033513	Soil	VQSNKLRRLKLDYRLLNGKPRATLIQRFDGSALLYGPNAKKIEFKIGTTLHEIQTEAETLGWVIAVEHLHREREGRVG
Ga0316628_1011301131	3300033513	Soil	ISHRRNRARRSKVDYRLLNGKPRATLIQRFDGSAFLSGPNTTRIEFEIGATIHEIQAKAEQLGWVIAIEHLHKEREGNLG
Ga0316628_1012418251	3300033513	Soil	LWKIKMDYRLLNGKPRATLIQRFDGSAVLLGPKSLKLEFDIGATLHEIQTKADQLGWVVAIEHLHKEREGITG
Ga0316628_1012786611	3300033513	Soil	VDYRLLNGKPRATLIQRFDGSAFLYGPKATIIEFEIGTTLYEIQAKVEQLGWVIAIEHLHKEREGKVG
Ga0316628_1013704722	3300033513	Soil	MDYRLLNGKPRATLIQRFDGTAVLLGPKARRLEFGLGATLHEIQAEAELSGWVVAVEHLHKEREGRIG
Ga0316616_1003044712	3300033521	Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPKATRLEFKLGATLHEIQAEAEQVGWVVSVEHLHKEREGTTG
Ga0316617_1011908351	3300033557	Soil	VDYRLLNGKPRATLIQRYDGSVFLCGPKATKIEFEIGATIHEIQAKAEELGWVIAIEHLHKEREGNVG
Ga0373913_0204881_220_426	3300034089	Sediment Slurry	MDYRLLSGKPRATLIQRFDGSAVLLGPKASKLEFDCGATLHEIQAKADQVGWVVTIEHLNKEREGRTG
Ga0326723_0044425_1_171	3300034090	Peat Soil	MDYRLLNGKPRATLIQRFDGSAVLLGPNARKFEFDCGATLHEIQAKADQVGWVVAIE
Ga0326723_0046786_82_288	3300034090	Peat Soil	MDYRLLNGKPRATLIQRFDGSTVLLGPRARKLEFDIGATLHEIQAKADQVGWVVAIEHLHKEREGKIG
Ga0326723_0146820_759_971	3300034090	Peat Soil	MKMDYRVLNGKPKATLIQRFDGSAVLLGPKARKLEFDFGATLPEIQAKADQIGWVVAIEHLRKERESTTG
Ga0326723_0150749_220_426	3300034090	Peat Soil	MNYRLLNGKPRATLIQRFDGSAVLLGPKSRKLEFDFGATLPEIQAKADQVGWVVAIEHLRREREVRTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032325

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences