NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F032234

Metagenome / Metatranscriptome Family F032234

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F032234
Family Type Metagenome / Metatranscriptome
Number of Sequences 180
Average Sequence Length 53 residues
Representative Sequence VAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLVRP
Number of Associated Samples 166
Number of Associated Scaffolds 180

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 99.44 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 99.44 %
Associated GOLD sequencing projects 162
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (72.778 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(40.556 % of family members)
Environment Ontology (ENVO) Unclassified
(25.556 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.667 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.35%    β-sheet: 9.88%    Coil/Unstructured: 77.78%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 180 Family Scaffolds
PF03259Robl_LC7 98.89
PF05331DUF742 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 180 Family Scaffolds
COG2018Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB familySignal transduction mechanisms [T] 98.89


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.78 %
All OrganismsrootAll Organisms27.22 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10452245Not Available765Open in IMG/M
3300004082|Ga0062384_101026688Not Available591Open in IMG/M
3300004134|Ga0058906_1008629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales763Open in IMG/M
3300004631|Ga0058899_12272343Not Available669Open in IMG/M
3300004799|Ga0058863_10005323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales907Open in IMG/M
3300005185|Ga0066811_1013926Not Available628Open in IMG/M
3300005340|Ga0070689_100254274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis1450Open in IMG/M
3300005542|Ga0070732_10644766Not Available644Open in IMG/M
3300005577|Ga0068857_100542685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1095Open in IMG/M
3300005602|Ga0070762_11263552All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans512Open in IMG/M
3300006755|Ga0079222_11204421All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300006804|Ga0079221_10172253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis1157Open in IMG/M
3300007258|Ga0099793_10454160Not Available634Open in IMG/M
3300009545|Ga0105237_12095397Not Available575Open in IMG/M
3300009638|Ga0116113_1205413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans511Open in IMG/M
3300010083|Ga0127478_1017500Not Available550Open in IMG/M
3300010099|Ga0127450_1047263Not Available781Open in IMG/M
3300010116|Ga0127466_1123840Not Available624Open in IMG/M
3300010121|Ga0127438_1133162Not Available698Open in IMG/M
3300010159|Ga0099796_10547529All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans520Open in IMG/M
3300010322|Ga0134084_10367796Not Available552Open in IMG/M
3300010326|Ga0134065_10331180Not Available592Open in IMG/M
3300010371|Ga0134125_11972040Not Available635Open in IMG/M
3300010373|Ga0134128_11321066Not Available795Open in IMG/M
3300010401|Ga0134121_11861477Not Available630Open in IMG/M
3300010860|Ga0126351_1120197Not Available744Open in IMG/M
3300010860|Ga0126351_1275201Not Available648Open in IMG/M
3300010866|Ga0126344_1195252Not Available660Open in IMG/M
3300010876|Ga0126361_10364597Not Available547Open in IMG/M
3300011120|Ga0150983_11050074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales963Open in IMG/M
3300011120|Ga0150983_13606667Not Available723Open in IMG/M
3300011120|Ga0150983_14242286Not Available773Open in IMG/M
3300012387|Ga0134030_1172426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans550Open in IMG/M
3300012393|Ga0134052_1291040Not Available650Open in IMG/M
3300012481|Ga0157320_1014436Not Available658Open in IMG/M
3300014200|Ga0181526_10615668Not Available686Open in IMG/M
3300014654|Ga0181525_10629341Not Available599Open in IMG/M
3300014655|Ga0181516_10357470Not Available744Open in IMG/M
3300015077|Ga0173483_10176127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena966Open in IMG/M
3300015200|Ga0173480_10288269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena911Open in IMG/M
3300016319|Ga0182033_11017879Not Available737Open in IMG/M
3300016341|Ga0182035_11250209Not Available664Open in IMG/M
3300017942|Ga0187808_10153235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1016Open in IMG/M
3300017942|Ga0187808_10473867Not Available578Open in IMG/M
3300017966|Ga0187776_10180287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena1317Open in IMG/M
3300018007|Ga0187805_10104709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1280Open in IMG/M
3300018088|Ga0187771_11289500Not Available620Open in IMG/M
3300019162|Ga0184597_108198Not Available973Open in IMG/M
3300019177|Ga0184592_123835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans503Open in IMG/M
3300019258|Ga0181504_1439604Not Available732Open in IMG/M
3300019268|Ga0181514_1184882Not Available748Open in IMG/M
3300020004|Ga0193755_1140835Not Available739Open in IMG/M
3300020082|Ga0206353_10423113Not Available865Open in IMG/M
3300021178|Ga0210408_10405715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena1085Open in IMG/M
3300021402|Ga0210385_11070782Not Available619Open in IMG/M
3300021407|Ga0210383_11338565Not Available597Open in IMG/M
3300021420|Ga0210394_10942041Not Available750Open in IMG/M
3300021433|Ga0210391_11127614Not Available609Open in IMG/M
3300021479|Ga0210410_11622079All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans540Open in IMG/M
3300021559|Ga0210409_11473277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans556Open in IMG/M
3300022195|Ga0222625_1432242Not Available554Open in IMG/M
3300022505|Ga0242647_1013106Not Available766Open in IMG/M
3300022510|Ga0242652_1020636Not Available705Open in IMG/M
3300022513|Ga0242667_1009064Not Available871Open in IMG/M
3300022513|Ga0242667_1010130Not Available844Open in IMG/M
3300022527|Ga0242664_1060588Not Available711Open in IMG/M
3300022528|Ga0242669_1070954Not Available631Open in IMG/M
3300022713|Ga0242677_1021147Not Available805Open in IMG/M
3300022714|Ga0242671_1044665Not Available718Open in IMG/M
3300022715|Ga0242678_1018184Not Available829Open in IMG/M
3300022716|Ga0242673_1046081Not Available721Open in IMG/M
3300022718|Ga0242675_1040778Not Available745Open in IMG/M
3300022721|Ga0242666_1090398Not Available697Open in IMG/M
3300022724|Ga0242665_10089318Not Available896Open in IMG/M
3300023660|Ga0247550_101757Not Available708Open in IMG/M
3300023675|Ga0247533_101358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales878Open in IMG/M
3300024225|Ga0224572_1052748Not Available757Open in IMG/M
3300025899|Ga0207642_10511920Not Available736Open in IMG/M
3300025906|Ga0207699_10987777Not Available622Open in IMG/M
3300025927|Ga0207687_10667181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales881Open in IMG/M
3300025928|Ga0207700_11035645Not Available734Open in IMG/M
3300025930|Ga0207701_11088189Not Available663Open in IMG/M
3300025934|Ga0207686_10945383Not Available697Open in IMG/M
3300026330|Ga0209473_1282353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans558Open in IMG/M
3300026490|Ga0257153_1101901Not Available569Open in IMG/M
3300026999|Ga0207949_1010083Not Available854Open in IMG/M
3300027094|Ga0208094_108629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans526Open in IMG/M
3300027106|Ga0208607_103564Not Available701Open in IMG/M
3300027161|Ga0208368_103831Not Available757Open in IMG/M
3300027635|Ga0209625_1054750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales890Open in IMG/M
3300027842|Ga0209580_10361407Not Available723Open in IMG/M
3300027867|Ga0209167_10657798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans573Open in IMG/M
3300027879|Ga0209169_10750205All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans504Open in IMG/M
3300027884|Ga0209275_10489437Not Available700Open in IMG/M
3300028713|Ga0307303_10148326Not Available562Open in IMG/M
3300028759|Ga0302224_10164780Not Available871Open in IMG/M
3300028773|Ga0302234_10174335Not Available933Open in IMG/M
3300028780|Ga0302225_10273748Not Available803Open in IMG/M
3300028814|Ga0307302_10676633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans513Open in IMG/M
3300028875|Ga0307289_10276283Not Available691Open in IMG/M
3300028879|Ga0302229_10478531Not Available550Open in IMG/M
3300029636|Ga0222749_10806298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans513Open in IMG/M
3300029997|Ga0302302_1286001Not Available598Open in IMG/M
3300030007|Ga0311338_11276254Not Available691Open in IMG/M
3300030399|Ga0311353_10971185Not Available713Open in IMG/M
3300030528|Ga0210277_10771680Not Available625Open in IMG/M
3300030531|Ga0210274_1207193Not Available669Open in IMG/M
3300030535|Ga0210285_1391380Not Available657Open in IMG/M
3300030542|Ga0210249_1127361Not Available593Open in IMG/M
3300030549|Ga0210257_10110006Not Available877Open in IMG/M
3300030575|Ga0210288_1056050Not Available825Open in IMG/M
3300030583|Ga0210262_1132228Not Available641Open in IMG/M
3300030595|Ga0210276_10063008Not Available602Open in IMG/M
3300030595|Ga0210276_10797096Not Available610Open in IMG/M
3300030598|Ga0210287_1090767Not Available718Open in IMG/M
3300030617|Ga0311356_11220430Not Available691Open in IMG/M
3300030622|Ga0265391_10226518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans584Open in IMG/M
3300030623|Ga0265392_1043826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales810Open in IMG/M
3300030627|Ga0210269_10282445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans572Open in IMG/M
3300030629|Ga0210268_1171935Not Available672Open in IMG/M
3300030677|Ga0302317_10386359Not Available618Open in IMG/M
3300030739|Ga0302311_10612060Not Available731Open in IMG/M
3300030741|Ga0265459_13251820Not Available568Open in IMG/M
3300030776|Ga0075396_1868205Not Available697Open in IMG/M
3300030840|Ga0074020_10932388All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans552Open in IMG/M
3300030843|Ga0075392_11046072All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans523Open in IMG/M
3300030862|Ga0265753_1032567Not Available850Open in IMG/M
3300030877|Ga0265777_118612Not Available562Open in IMG/M
3300030886|Ga0265772_107521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans513Open in IMG/M
3300030936|Ga0138306_1433672Not Available689Open in IMG/M
3300030940|Ga0265740_1052134All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans507Open in IMG/M
3300030969|Ga0075394_10150240Not Available790Open in IMG/M
3300030970|Ga0075381_11401856All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans512Open in IMG/M
3300030980|Ga0074027_11280929Not Available728Open in IMG/M
3300030982|Ga0265748_104433Not Available648Open in IMG/M
3300031044|Ga0265747_113736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans525Open in IMG/M
3300031057|Ga0170834_106401470Not Available596Open in IMG/M
3300031231|Ga0170824_128678079Not Available627Open in IMG/M
3300031421|Ga0308194_10134116Not Available748Open in IMG/M
3300031474|Ga0170818_112830005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans532Open in IMG/M
3300031525|Ga0302326_10264580Not Available2785Open in IMG/M
3300031546|Ga0318538_10618823Not Available587Open in IMG/M
3300031549|Ga0318571_10194743Not Available722Open in IMG/M
3300031572|Ga0318515_10319456Not Available833Open in IMG/M
3300031573|Ga0310915_10428470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales940Open in IMG/M
3300031679|Ga0318561_10563863Not Available627Open in IMG/M
3300031681|Ga0318572_10351190Not Available874Open in IMG/M
3300031713|Ga0318496_10345261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales822Open in IMG/M
3300031736|Ga0318501_10674426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans569Open in IMG/M
3300031765|Ga0318554_10409784Not Available769Open in IMG/M
3300031770|Ga0318521_10192349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1175Open in IMG/M
3300031770|Ga0318521_10516763Not Available718Open in IMG/M
3300031780|Ga0318508_1176601Not Available610Open in IMG/M
3300031805|Ga0318497_10312452Not Available876Open in IMG/M
3300031805|Ga0318497_10443857Not Available726Open in IMG/M
3300031819|Ga0318568_10311053Not Available978Open in IMG/M
3300031821|Ga0318567_10104653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena1535Open in IMG/M
3300031821|Ga0318567_10683235All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans582Open in IMG/M
3300031826|Ga0316031_111217All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans567Open in IMG/M
3300031831|Ga0318564_10257597Not Available773Open in IMG/M
3300031835|Ga0318517_10301733Not Available724Open in IMG/M
3300031896|Ga0318551_10527439Not Available678Open in IMG/M
3300031896|Ga0318551_10561970Not Available657Open in IMG/M
3300031910|Ga0306923_10539789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermostaphylospora → Thermostaphylospora chromogena1315Open in IMG/M
3300032008|Ga0318562_10351020Not Available857Open in IMG/M
3300032008|Ga0318562_10541964Not Available673Open in IMG/M
3300032009|Ga0318563_10404954Not Available738Open in IMG/M
3300032028|Ga0316052_115105Not Available520Open in IMG/M
3300032044|Ga0318558_10272724Not Available834Open in IMG/M
3300032044|Ga0318558_10460210Not Available634Open in IMG/M
3300032066|Ga0318514_10327786Not Available810Open in IMG/M
3300032067|Ga0318524_10469841Not Available659Open in IMG/M
3300032067|Ga0318524_10544220Not Available610Open in IMG/M
3300032180|Ga0307471_102399785Not Available666Open in IMG/M
3300032515|Ga0348332_13460750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans511Open in IMG/M
3300032515|Ga0348332_13543220Not Available853Open in IMG/M
3300032756|Ga0315742_11766093Not Available677Open in IMG/M
3300032896|Ga0335075_11050694Not Available724Open in IMG/M
3300033828|Ga0334850_042855Not Available849Open in IMG/M
3300034199|Ga0370514_171916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Ciceribacter → Ciceribacter ferrooxidans561Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil40.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.11%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.11%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.44%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.22%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.22%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.67%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.67%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.67%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.67%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.67%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.11%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.11%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.11%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.11%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.11%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.11%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.11%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.56%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.56%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.56%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.56%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.56%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.56%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.56%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.56%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.56%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.56%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004134Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005185Soil and rhizosphere microbial communities from Laval, Canada - mgHPBEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300010083Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010099Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010116Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010121Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012387Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012481Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610Host-AssociatedOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300019162Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019177Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019268Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023660Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023675Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300027094Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF022 (SPAdes)EnvironmentalOpen in IMG/M
3300027106Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF031 (SPAdes)EnvironmentalOpen in IMG/M
3300027161Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028773Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029997Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030528Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030531Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030535Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO749-VDE026SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030542Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR003SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030549Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030575Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE050SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030583Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE023SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030595Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO083SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030598Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030622Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030623Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030627Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE095SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030629Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030677Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030776Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030840Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030843Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030877Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030886Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030936Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030940Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030970Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030980Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus N2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030982Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031044Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031826Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032028Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300033828Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1045224513300001593Forest SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPARSGYGFANEEDGSTRLVRPYTVTGGRTQ
Ga0062384_10102668823300004082Bog Forest SoilVAGQERGDDRSPFVGLPGSWQGRAGLWDEGPGPARSGFGFATEEDGAT
Ga0058906_100862923300004134Forest SoilVAGQGRGDDRSPFVGLPGSWQSTGVRAGLWDEGPGPARSGFGFATEEDGATNLVRPYTVTGGRTQPRYQ
Ga0058899_1227234323300004631Forest SoilVAGQGRGDDRSPFVDLPGSWQGAGARAALWDEGPGPARSGFGFATEEDGA
Ga0058863_1000532333300004799Host-AssociatedVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLVRPYTVT
Ga0066811_101392623300005185SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGSEDDG
Ga0070689_10025427433300005340Switchgrass RhizosphereVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLVRPYTVTG
Ga0070732_1064476613300005542Surface SoilVAGQGRGDDRSPFVGLPGSWQSTGVRAGLWDEGPGPA
Ga0068857_10054268533300005577Corn RhizosphereVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAAEEDGATRLVRPYTVTGGR
Ga0070762_1126355223300005602SoilVAGQGRGDDRSPFSSSPVSWQGAGTRAGGWDDSPVRSGNGTGGFGSFGAEEDGSTRLVRPYTV
Ga0079222_1120442113300006755Agricultural SoilVAGQARGDDRSPFVGLPGSWQGRAGLWDEGPGPARSGFGFATEEDGATRLV
Ga0079221_1017225313300006804Agricultural SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRS
Ga0099793_1045416013300007258Vadose Zone SoilVAGQGRGESQSPFVGLPGSWQGRAGLWDEGPGPGRSGF
Ga0105237_1209539713300009545Corn RhizosphereVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRS
Ga0116113_120541323300009638PeatlandVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFASFGTDEDGATRLVRP
Ga0127478_101750013300010083Grasslands SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWEEGPGPGRSGFG
Ga0127450_104726323300010099Grasslands SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVRPYTVTGGRTQP
Ga0127466_112384013300010116Grasslands SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAAEEDGATRL
Ga0127438_113316213300010121Grasslands SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVRPYTVTG
Ga0099796_1054752913300010159Vadose Zone SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVRPYT
Ga0134084_1036779613300010322Grasslands SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDD
Ga0134065_1033118013300010326Grasslands SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVR
Ga0134125_1197204013300010371Terrestrial SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAAEEDGATRLVRPY
Ga0134128_1132106633300010373Terrestrial SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAAEEDGATR
Ga0134121_1186147723300010401Terrestrial SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLVRPYTVTGGRTQ
Ga0126351_112019733300010860Boreal Forest SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGLATEED
Ga0126351_127520123300010860Boreal Forest SoilVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPRSGFGVGSDEDG
Ga0126344_119525213300010866Boreal Forest SoilVAGQGRGDNQSPFVGLPGSWQGRAGPWDEGPGPGRSGFGLAAEEDGATRLVRPYTVT
Ga0126361_1036459713300010876Boreal Forest SoilVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPRS
Ga0150983_1105007413300011120Forest SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGNFGTDEDGATRLVRPYTAEKR
Ga0150983_1360666723300011120Forest SoilVAGQGRGDNQSPLVGLPGSWQGRAGLWDEGPGPGRPGFGFATEEDGATRLVRPYTVTGGR
Ga0150983_1424228613300011120Forest SoilVAGQARGDDRSPFAGSPSAWQGGAVRAGGWDDGAVRNASGFGSFGAEEDGSTRLVRPYTVTGGRTQP
Ga0134030_117242613300012387Grasslands SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPARSGFGFAAEEDGATRLVRPYTVTGGRTQPRY
Ga0134052_129104023300012393Grasslands SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWEEGPGPGRSGFGF
Ga0157320_101443613300012481Arabidopsis RhizosphereVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGF
Ga0181526_1061566813300014200BogVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLVRP
Ga0181525_1062934123300014654BogVAGQGRRDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGF
Ga0181516_1035747013300014655BogVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPARSGYGFANEEDGSTRLV
Ga0173483_1017612733300015077SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLVRPYTVTG
Ga0173480_1028826913300015200SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVRPYTV
Ga0182033_1101787923300016319SoilVAGQGRGDNQSPFVGLPGAWQGRAGLWDEGPGPGRSGFGFAAEEDGATRLVRPY
Ga0182035_1125020923300016341SoilVAGQGRGDNQSPFVGLPGSWQGRAGLCDEGPGPGRSGFGFDTEEDGATRLVRPYTVTGGR
Ga0187808_1015323533300017942Freshwater SedimentREVLVAGQGRGDDRSPFVGLPGSWQGTGARAGLRDEEPGPARSGFGFATEEDGTTRLVRPYTVTGGLSGGPRAG
Ga0187808_1047386713300017942Freshwater SedimentVAGQGRGDDRSPFVGLPGSWQGSGARAGLWDEGSGPARSGIGFAAEEDGATRI
Ga0187776_1018028733300017966Tropical PeatlandVAGQARGDDRSPFVDLPGSWQGAGARAGLWDEGPEPARSGFGLAIEEDGATRLVRPYTVTGG
Ga0187805_1010470913300018007Freshwater SedimentVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGATRLVRPYTVTGG
Ga0187771_1128950023300018088Tropical PeatlandVAGQGRGDDRSPFVGLPGSWLGTGVRAGLRDEEPGPARPGFGFATEEDGATTRIVRPYTV
Ga0184597_10819813300019162SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLVRPYTVTGGRTQPR
Ga0184592_12383523300019177SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGATRLVRPYTVTGGRTQPRYQ
Ga0181504_143960413300019258PeatlandVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFATFGTDEDGATRLVR
Ga0181514_118488213300019268PeatlandVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFATF
Ga0193755_114083523300020004SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFG
Ga0206353_1042311313300020082Corn, Switchgrass And Miscanthus RhizosphereVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAAEEDGATRLVR
Ga0210408_1040571533300021178SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVRPY
Ga0210385_1107078223300021402SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPGHSGFGFATEEDGATRL
Ga0210383_1133856523300021407SoilVAGQGRGDDRSPFVGLPGSWQGTGARAGLWDEGPGPARAGFGFATEEDGATRLVRPYTVT
Ga0210394_1094204123300021420SoilVAGQGRGDDRSPFAGLPGSWQGAGARAGLWDEGPGPTRSGFGFMTEDDGATKLVRPYTVTGGRT
Ga0210391_1112761423300021433SoilVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGN
Ga0210410_1162207923300021479SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFPAEEDGATRL
Ga0210409_1147327723300021559SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGATRLVRPYT
Ga0222625_143224223300022195Groundwater SedimentVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNE
Ga0242647_101310613300022505SoilVAGQGRGDDRSPFVGLPGSWQGAGVRAALWDEGPGPARSGFGFATEEDGATRLVRPYTVTGGRTQPR
Ga0242652_102063613300022510SoilVAGQGRGDDRSPFAGTASPSGSTVSWQNAGVRAGGWDDGAVRSGFGSSFGAEEEGATRLVRPYTVTGGRTQ
Ga0242667_100906433300022513SoilVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNFGTDDDGATRLVRPYTVTGGRTQPRYQL
Ga0242667_101013013300022513SoilVAGQGRGDNQSPFVGLPGPWQGRAGLWDEGPGPARSGFGFATE
Ga0242664_106058823300022527SoilVAGQRRGDNQSPFVGLPGSWQGRAGLWDEGPGPARSGFGLPTEEDGATRLV
Ga0242669_107095423300022528SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGLGFATDE
Ga0242677_102114723300022713SoilVAGQGRGDDRSPFASSPSAWQQGGALRAGGWEDSAVRNTTGFGNFGAEEDGSTRLVRPYTVTGGRTQPRYQL
Ga0242671_104466513300022714SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPTRSGFGFGTDEDGATRLVRPYTVTGG
Ga0242678_101818413300022715SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGHSGFGFATEEDGATRLV
Ga0242673_104608123300022716SoilVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNFGTDDDGATRLVRPYTVTGGRT
Ga0242675_104077813300022718SoilVAGQRRGDNQSPFVGLPGSWQGRAGLWDEGPGPARSGFGLPTEEDGATRLVRPYTVTGGR
Ga0242666_109039813300022721SoilVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRS
Ga0242665_1008931813300022724SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGTEDDGSTRL
Ga0247550_10175713300023660SoilVAGQGRGDDRSPFVGLPGSWQNAGARAGLWDEGPGPARSGFGSATEEDGATRLVRPYT
Ga0247533_10135833300023675SoilVAGLGRGDDRSPFGGPPGAWQSGAVRAGGWDDSSVRNTSGFGDFGAEEDGSTRLVRPYTV
Ga0224572_105274833300024225RhizosphereVAGQGRGDDRSPFSGSPVSWQGAGTRAGGWDDSPVRSGNGTG
Ga0207642_1051192023300025899Miscanthus RhizosphereVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLVRPYTVTGGR
Ga0207699_1098777723300025906Corn, Switchgrass And Miscanthus RhizosphereVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAE
Ga0207687_1066718133300025927Miscanthus RhizosphereVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNED
Ga0207700_1103564513300025928Corn, Switchgrass And Miscanthus RhizosphereVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGF
Ga0207701_1108818923300025930Corn, Switchgrass And Miscanthus RhizosphereVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRL
Ga0207686_1094538313300025934Miscanthus RhizosphereVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLVRP
Ga0209473_128235313300026330SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFPTEEDGATRLVRPYTVTGGR
Ga0257153_110190123300026490SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLV
Ga0207949_101008313300026999Forest SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGTEDDGSTRLVRPYTVTGGRTQPR
Ga0208094_10862913300027094Forest SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVRPLTTATFT
Ga0208607_10356423300027106Forest SoilVAGQGRGDDRSPFVGLPGSWQGTGARAGLWDEGPGPARSGFGFATEE
Ga0208368_10383113300027161Forest SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFPTEEDGATRL
Ga0209625_105475033300027635Forest SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGATRLVRPY
Ga0209580_1036140713300027842Surface SoilVAGQGRGDDRSPFVGLPGSWQSTGVRAGLWDEGPGPARSGFGFATE
Ga0209167_1065779823300027867Surface SoilVAGQGRGDNRSPFAGLPGSWQGAGARAGLWDEGPGPARSGFGFMTEDDGATKLVRP
Ga0209169_1075020523300027879SoilVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNFGTDDD
Ga0209275_1048943723300027884SoilVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNFGTDDDGATRLVRPYTVTGGRTQPR
Ga0307303_1014832613300028713SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGS
Ga0302224_1016478013300028759PalsaVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFATFGTDEDGATR
Ga0302234_1017433533300028773PalsaVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNFGTDDDGATRLVRPYT
Ga0302225_1027374833300028780PalsaVAGQGRRDDRSPFVGLPGSWQGTGARGGLWDEGPGPARSGFGFATEEDGATRLVRPYTVTGGRTQPRY
Ga0307302_1067663323300028814SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGSEDDGSTR
Ga0307289_1027628313300028875SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLV
Ga0302229_1047853123300028879PalsaVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFAT
Ga0222749_1080629813300029636SoilVASQGRGDDRSPFAALPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGSTRLVRPYTVTGGRTQPR
Ga0302302_128600123300029997PalsaVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNF
Ga0311338_1127625413300030007PalsaVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGNFGTDE
Ga0311353_1097118513300030399PalsaVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFATFGTD
Ga0210277_1077168023300030528SoilVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFATFGADE
Ga0210274_120719323300030531SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPARSGYGFANEEDGSTRLVRPYTVTGGRTQP
Ga0210285_139138023300030535SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGFGTEEDGGTRLV
Ga0210249_112736113300030542SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGATRLVRPYTVT
Ga0210257_1011000623300030549SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPGRSGYGNFGSDEDGATRLVRPYTVTGGRTQPRY
Ga0210288_105605033300030575SoilVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFATFGTDEDGATRL
Ga0210262_113222813300030583SoilVAGQGRGDDRSPFSSPPNSWQGAGIRAGGWDDGSVRSGSGFSSFGAEE
Ga0210276_1006300823300030595SoilVAGQGRGDDRSPFVGLPGSWQGAGGRAGLWDEGGASQGPMRSGFGFGTDDDGSTRLVR
Ga0210276_1079709623300030595SoilVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNFGTDDDGATRLVRPYTVRKIKQKR
Ga0210287_109076713300030598SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSG
Ga0311356_1122043013300030617PalsaVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRS
Ga0265391_1022651813300030622SoilVAGQGRGDDRSPFSSSPVSWQGAGTRAGGWDDSPVRSGNGTGGFGSFGAEEDGSTRLVRPYTVTGGRTQSRFQLAIE
Ga0265392_104382633300030623SoilVAGQGRGDDRSPFSSPPNSWQGAGIRAGGWDDGSVRS
Ga0210269_1028244513300030627SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGTFGTDEDGATRLV
Ga0210268_117193523300030629SoilVAGQGRRDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGATRLVR
Ga0302317_1038635913300030677PalsaVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGNFGTDEDGATRLVRPYTV
Ga0302311_1061206023300030739PalsaVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGR
Ga0265459_1325182023300030741SoilVAGQGRGDDRSPFVGLPGSWQGAGARAALWDEGPGPARSGFGFATEEKK
Ga0075396_186820513300030776SoilVAGQGRGDDRVPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAAEEDGATRL
Ga0074020_1093238823300030840SoilVAGQGRGDDRSPFSSPPSSWQSTGIRAGGWDDGPVRSGSGYSSFGAEEDGSTRLVRPYTVTGGRTQS
Ga0075392_1104607223300030843SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGA
Ga0265753_103256713300030862SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRL
Ga0265777_11861223300030877SoilVAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFGNFG
Ga0265772_10752113300030886SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATE
Ga0138306_143367213300030936SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDERPGPERSGFGFATEEDGATRLVRPYTVTGGRTQPRYQL
Ga0265740_105213423300030940SoilVAGQGRGDSQSPFVGLPGSWQGRAGPWDEGPGPARSGFGLATEEDGATRLVRPYTV
Ga0075394_1015024023300030969SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFG
Ga0075381_1140185613300030970SoilVAGQGQGDDRSPFVGLPGSWQGRAGLWDEGPGPGRSGF
Ga0074027_1128092913300030980SoilVASQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSG
Ga0265748_10443313300030982SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEEDGATRLV
Ga0265747_11373623300031044SoilVAGQGRGDDRSPFAGSPGSWQGAGTRAGGWDDGPVRNYASGFGSFGAEEDGSTRLVRPYT
Ga0170834_10640147013300031057Forest SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRL
Ga0170824_12867807923300031231Forest SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGA
Ga0308194_1013411633300031421SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATE
Ga0170818_11283000513300031474Forest SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGAEDDGSTRLVRP
Ga0302326_1026458033300031525PalsaVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGNFGTDEDGATRLVRPYTVTGG
Ga0318538_1061882313300031546SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLVRPYT
Ga0318571_1019474313300031549SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGGFSTEEDGATRLVRPYTVT
Ga0318515_1031945633300031572SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGGFSTEEDGATRL
Ga0310915_1042847013300031573SoilVAGQARGDDRSPFVGLPGSWQGTGARAGLWDEGPGPARSGFGFATEEDGATRLVRP
Ga0318561_1056386323300031679SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAA
Ga0318572_1035119013300031681SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLVRPYTVTGGR
Ga0318496_1034526133300031713SoilVAGQGRGDDRSPFVGLPGSWQGTGAGAGLRDEGPVRSGFGFATGEDGT
Ga0318501_1067442613300031736SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLVRPY
Ga0318554_1040978413300031765SoilVASQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLVRPYTVTGGRTQ
Ga0318521_1019234913300031770SoilVAGQGRGDDRSPFVGLPGSWQGTGAKAGLWDEGPGPARSGFGFATEEDGATRLVR
Ga0318521_1051676323300031770SoilVAGQGRSDDRSPFVGLPGSWQGAGARLGLRDEGAGPALSGFGFATEEDGATRLVRPYTVTGGRTQPRY
Ga0318508_117660113300031780SoilVASQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGHSGFGFATEEDGATRLVRPYTVTGGR
Ga0318497_1031245213300031805SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGGFSTEEDGATRLVRPYTVTGG
Ga0318497_1044385713300031805SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGSGRSGFGFATEEDGATRLVRPYTVTGGRTQPRYQ
Ga0318568_1031105333300031819SoilVAGQGRGDDRSPFVGLPGSWQGTGAKAGLWDEGPGPARSGFGFATEEDGATRLVRPYTVTGGRTQPRYQ
Ga0318567_1010465313300031821SoilVAGQARGDDRSPFVGLPGSWQGTGARAGLWDEGPGPARSGFGFATEEDGATRLVRPYT
Ga0318567_1068323523300031821SoilVAGQGRGDDRSPFVGLPGSWQGAGGRAGLWDEGPGPARSGFGFATEEDGATRLVRPYTVTGGRTQPRY
Ga0316031_11121713300031826SoilVAGQGRGDDRSPFASSPGSWQGAGTRAGGWDDGPVRSNVSGFGSFGAEEDGSTRLVRPYTVTGGRTQSRFQL
Ga0318564_1025759713300031831SoilVAGQGRGDDRSPFVGLPGSWQGTGAGAGLRDEGPVRSGFGFATGEDGTTRLVRPYTVTG
Ga0318517_1030173313300031835SoilVAGQARGDDRSPFVGLPGSWQGTGARAGLWDEGPGPARSGFGFATEEDGA
Ga0318551_1052743923300031896SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGGFSTEEDGATRLVRPYTVTGGRTQPRYQ
Ga0318551_1056197023300031896SoilVAGQGRGDDRSPFVGLPGSWQGAGARAGLWDEGPGPARSGFGFATEEDGAT
Ga0306923_1053978913300031910SoilVAGQARGDDRSPFVGLPGSWQGTGARAGLWDEGPGPARSGFGFATEEDGATRL
Ga0318562_1035102023300032008SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEED
Ga0318562_1054196423300032008SoilVASQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEE
Ga0318563_1040495413300032009SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGQGPERSGFGFAT
Ga0316052_11510513300032028SoilVAGQGRGDDRSPFVGLPGSWQNAGARAGLWDEGPGPA
Ga0318558_1027272413300032044SoilVAGKGRGDDRSPFVGLPGSWQGSGARAGLWDEGPGPARSGFGFATEEDGATRLVRPY
Ga0318558_1046021023300032044SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGSGSGRSGFGFATEEDGATRLVRPYTV
Ga0318514_1032778613300032066SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFAT
Ga0318524_1046984123300032067SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFATEEDGATRLV
Ga0318524_1054422023300032067SoilVAGQGRGDNQSPFVGLPGSWQGRAGLWNERPGPGGSGFGFATEEDGATR
Ga0307471_10239978513300032180Hardwood Forest SoilVAGQGRGDSQSPFVGLPGSWQGRAGLWDEGPGPGRSGFGFGNEDDGSTRLVRPYT
Ga0348332_1346075013300032515Plant LitterVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGNFGTDEDGATRLVRPYTVTGGR
Ga0348332_1354322013300032515Plant LitterVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGFGTEEDGGTRLVRPYT
Ga0315742_1176609313300032756Forest SoilVAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGTFGTDEDGATRLVRPYT
Ga0335075_1105069413300032896SoilMAGQGRGDDRSPFAGLPGSWQGAGARAGLWEEGPNGSGSARSGFGFTVDEEGATKLVRPYTVTGGRTQ
Ga0334850_042855_1_1323300033828SoilMAGQGRGDDRSPFVGLPGSWQGRAGLWDEGPGPRSGFGNFGTDE
Ga0370514_171916_2_1993300034199Untreated Peat SoilMAGQGRGDDRPPFVGLPGSWQGRAGLWDEGPGPGRSGFASFGTDEDGATRLVRPYTVTGGRTQPRY


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.