NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F032136

Metagenome / Metatranscriptome Family F032136

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F032136
Family Type Metagenome / Metatranscriptome
Number of Sequences 180
Average Sequence Length 44 residues
Representative Sequence MYLTSFVTTRIGVELAAVQRKLPDCVVVGLQLYSARTFHVTL
Number of Associated Samples 83
Number of Associated Scaffolds 180

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 92.70 %
% of genes near scaffold ends (potentially truncated) 97.22 %
% of genes from short scaffolds (< 2000 bps) 98.33 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (69.444 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(73.333 % of family members)
Environment Ontology (ENVO) Unclassified
(91.111 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(87.222 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.29%    β-sheet: 0.00%    Coil/Unstructured: 45.71%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 180 Family Scaffolds
PF04195Transposase_28 1.11
PF02992Transposase_21 1.11
PF10551MULE 0.56
PF14223Retrotran_gag_2 0.56
PF00665rve 0.56
PF13456RVT_3 0.56
PF00078RVT_1 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 180 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.56
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.56
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.56
COG4584TransposaseMobilome: prophages, transposons [X] 0.56


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.44 %
All OrganismsrootAll Organisms30.56 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005331|Ga0070670_102172093Not Available512Open in IMG/M
3300009011|Ga0105251_10588974Not Available527Open in IMG/M
3300009092|Ga0105250_10450200All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum578Open in IMG/M
3300009975|Ga0105129_121879All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum502Open in IMG/M
3300009980|Ga0105135_112307All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum676Open in IMG/M
3300009980|Ga0105135_127894Not Available523Open in IMG/M
3300009980|Ga0105135_129573Not Available512Open in IMG/M
3300009981|Ga0105133_118912Not Available596Open in IMG/M
3300009989|Ga0105131_119250Not Available662Open in IMG/M
3300009989|Ga0105131_121877Not Available638Open in IMG/M
3300009989|Ga0105131_142184Not Available511Open in IMG/M
3300009992|Ga0105120_1023678Not Available692Open in IMG/M
3300009994|Ga0105126_1051185All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum524Open in IMG/M
3300009995|Ga0105139_1042255Not Available778Open in IMG/M
3300009995|Ga0105139_1068007Not Available657Open in IMG/M
3300009995|Ga0105139_1082955Not Available606Open in IMG/M
3300009995|Ga0105139_1104103Not Available547Open in IMG/M
3300010371|Ga0134125_12034924Not Available624Open in IMG/M
3300010371|Ga0134125_12313616All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum584Open in IMG/M
3300010371|Ga0134125_12630920All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum547Open in IMG/M
3300010397|Ga0134124_11288469All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum753Open in IMG/M
3300010397|Ga0134124_11349516Not Available737Open in IMG/M
3300010403|Ga0134123_11479996Not Available722Open in IMG/M
3300012949|Ga0153798_10266891Not Available567Open in IMG/M
3300012949|Ga0153798_10274083Not Available554Open in IMG/M
3300014968|Ga0157379_12488315Not Available517Open in IMG/M
3300015270|Ga0182183_1084448Not Available523Open in IMG/M
3300015273|Ga0182102_1042601All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum518Open in IMG/M
3300015278|Ga0182099_1018090Not Available740Open in IMG/M
3300015280|Ga0182100_1068289Not Available575Open in IMG/M
3300015284|Ga0182101_1022270Not Available818Open in IMG/M
3300015293|Ga0182103_1037363All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum698Open in IMG/M
3300015297|Ga0182104_1065597Not Available626Open in IMG/M
3300015297|Ga0182104_1089886Not Available561Open in IMG/M
3300015301|Ga0182184_1025038Not Available800Open in IMG/M
3300015301|Ga0182184_1088242All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum527Open in IMG/M
3300015301|Ga0182184_1102268Not Available500Open in IMG/M
3300015310|Ga0182162_1063540All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum655Open in IMG/M
3300015310|Ga0182162_1068707Not Available637Open in IMG/M
3300015311|Ga0182182_1034055All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae781Open in IMG/M
3300015311|Ga0182182_1084847All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum575Open in IMG/M
3300015312|Ga0182168_1032992All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae842Open in IMG/M
3300015312|Ga0182168_1111399Not Available546Open in IMG/M
3300015313|Ga0182164_1047134Not Available747Open in IMG/M
3300015313|Ga0182164_1074701Not Available636Open in IMG/M
3300015313|Ga0182164_1101369All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum567Open in IMG/M
3300015313|Ga0182164_1120623Not Available530Open in IMG/M
3300015315|Ga0182120_1026031Not Available916Open in IMG/M
3300015315|Ga0182120_1065406Not Available672Open in IMG/M
3300015315|Ga0182120_1098808Not Available576Open in IMG/M
3300015315|Ga0182120_1139945Not Available501Open in IMG/M
3300015316|Ga0182121_1128189All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum531Open in IMG/M
3300015317|Ga0182136_1072892Not Available647Open in IMG/M
3300015319|Ga0182130_1023546All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum914Open in IMG/M
3300015319|Ga0182130_1064751All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum662Open in IMG/M
3300015319|Ga0182130_1090529Not Available589Open in IMG/M
3300015320|Ga0182165_1031485All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum886Open in IMG/M
3300015320|Ga0182165_1044660Not Available787Open in IMG/M
3300015320|Ga0182165_1049295Not Available761Open in IMG/M
3300015320|Ga0182165_1117712Not Available551Open in IMG/M
3300015320|Ga0182165_1125024Not Available538Open in IMG/M
3300015327|Ga0182114_1002991All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1813Open in IMG/M
3300015327|Ga0182114_1038744Not Available870Open in IMG/M
3300015327|Ga0182114_1052345Not Available784Open in IMG/M
3300015327|Ga0182114_1057713All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae756Open in IMG/M
3300015327|Ga0182114_1074425All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum689Open in IMG/M
3300015327|Ga0182114_1129151Not Available554Open in IMG/M
3300015328|Ga0182153_1036995Not Available843Open in IMG/M
3300015328|Ga0182153_1071628Not Available672Open in IMG/M
3300015328|Ga0182153_1141252Not Available519Open in IMG/M
3300015329|Ga0182135_1154264Not Available503Open in IMG/M
3300015331|Ga0182131_1147809Not Available514Open in IMG/M
3300015332|Ga0182117_1039459All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum896Open in IMG/M
3300015332|Ga0182117_1131379All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae563Open in IMG/M
3300015333|Ga0182147_1073343All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae705Open in IMG/M
3300015333|Ga0182147_1124488Not Available573Open in IMG/M
3300015334|Ga0182132_1003894All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum1729Open in IMG/M
3300015334|Ga0182132_1153211Not Available525Open in IMG/M
3300015335|Ga0182116_1013241All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1299Open in IMG/M
3300015335|Ga0182116_1116385All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza608Open in IMG/M
3300015336|Ga0182150_1091487All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum639Open in IMG/M
3300015336|Ga0182150_1140388All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum540Open in IMG/M
3300015337|Ga0182151_1088636All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum647Open in IMG/M
3300015337|Ga0182151_1130688All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum556Open in IMG/M
3300015337|Ga0182151_1149957Not Available525Open in IMG/M
3300015338|Ga0182137_1054435All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum818Open in IMG/M
3300015338|Ga0182137_1172046Not Available511Open in IMG/M
3300015339|Ga0182149_1069794Not Available727Open in IMG/M
3300015339|Ga0182149_1106746Not Available617Open in IMG/M
3300015339|Ga0182149_1121232Not Available586Open in IMG/M
3300015339|Ga0182149_1127686All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum573Open in IMG/M
3300015340|Ga0182133_1105593Not Available650Open in IMG/M
3300015348|Ga0182115_1013790Not Available1896Open in IMG/M
3300015348|Ga0182115_1124487All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum819Open in IMG/M
3300015348|Ga0182115_1182669Not Available672Open in IMG/M
3300015348|Ga0182115_1243829Not Available572Open in IMG/M
3300015348|Ga0182115_1280092Not Available528Open in IMG/M
3300015348|Ga0182115_1291684Not Available515Open in IMG/M
3300015349|Ga0182185_1001227Not Available3227Open in IMG/M
3300015349|Ga0182185_1027136Not Available1365Open in IMG/M
3300015349|Ga0182185_1170477Not Available653Open in IMG/M
3300015349|Ga0182185_1193083Not Available615Open in IMG/M
3300015349|Ga0182185_1280648Not Available509Open in IMG/M
3300015350|Ga0182163_1148956All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum727Open in IMG/M
3300015350|Ga0182163_1196428Not Available632Open in IMG/M
3300015350|Ga0182163_1213086Not Available605Open in IMG/M
3300015350|Ga0182163_1253143Not Available552Open in IMG/M
3300015352|Ga0182169_1106753All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum899Open in IMG/M
3300015352|Ga0182169_1217618Not Available623Open in IMG/M
3300015352|Ga0182169_1238633Not Available592Open in IMG/M
3300015352|Ga0182169_1248958Not Available578Open in IMG/M
3300015353|Ga0182179_1091239Not Available900Open in IMG/M
3300015353|Ga0182179_1116972Not Available810Open in IMG/M
3300015353|Ga0182179_1186362All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum657Open in IMG/M
3300015353|Ga0182179_1187043Not Available656Open in IMG/M
3300015353|Ga0182179_1192082Not Available648Open in IMG/M
3300015353|Ga0182179_1226855Not Available599Open in IMG/M
3300015353|Ga0182179_1275717All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae545Open in IMG/M
3300015353|Ga0182179_1280076Not Available540Open in IMG/M
3300015353|Ga0182179_1320493Not Available506Open in IMG/M
3300015354|Ga0182167_1190276Not Available752Open in IMG/M
3300015354|Ga0182167_1197650Not Available736Open in IMG/M
3300015354|Ga0182167_1205095Not Available720Open in IMG/M
3300015354|Ga0182167_1207620All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum715Open in IMG/M
3300015354|Ga0182167_1229501All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum674Open in IMG/M
3300015354|Ga0182167_1236071All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum662Open in IMG/M
3300015354|Ga0182167_1261291Not Available622Open in IMG/M
3300015354|Ga0182167_1271350Not Available608Open in IMG/M
3300015354|Ga0182167_1272462All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum606Open in IMG/M
3300015354|Ga0182167_1284199Not Available590Open in IMG/M
3300015354|Ga0182167_1300418Not Available570Open in IMG/M
3300015354|Ga0182167_1328847Not Available538Open in IMG/M
3300017408|Ga0182197_1073486Not Available662Open in IMG/M
3300017408|Ga0182197_1123551Not Available544Open in IMG/M
3300017408|Ga0182197_1125469Not Available541Open in IMG/M
3300017412|Ga0182199_1115176Not Available631Open in IMG/M
3300017412|Ga0182199_1186202All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae522Open in IMG/M
3300017412|Ga0182199_1190228Not Available518Open in IMG/M
3300017414|Ga0182195_1208063Not Available516Open in IMG/M
3300017414|Ga0182195_1222626Not Available501Open in IMG/M
3300017421|Ga0182213_1236880Not Available523Open in IMG/M
3300017432|Ga0182196_1032897Not Available852Open in IMG/M
3300017435|Ga0182194_1070314Not Available674Open in IMG/M
3300017439|Ga0182200_1077628All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum655Open in IMG/M
3300017440|Ga0182214_1087372Not Available655Open in IMG/M
3300017447|Ga0182215_1091466Not Available673Open in IMG/M
3300017693|Ga0182216_1017755Not Available1278Open in IMG/M
3300017693|Ga0182216_1067542All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum804Open in IMG/M
3300017693|Ga0182216_1124414Not Available637Open in IMG/M
3300017693|Ga0182216_1155703Not Available583Open in IMG/M
3300017693|Ga0182216_1215010Not Available511Open in IMG/M
3300025923|Ga0207681_11821404Not Available508Open in IMG/M
3300025972|Ga0207668_10704681All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum888Open in IMG/M
3300025986|Ga0207658_12099383Not Available514Open in IMG/M
3300026075|Ga0207708_10216816Not Available1532Open in IMG/M
3300026088|Ga0207641_12301564Not Available538Open in IMG/M
3300028050|Ga0268328_1015386Not Available849Open in IMG/M
3300028050|Ga0268328_1072873All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum500Open in IMG/M
3300028053|Ga0268346_1036399Not Available538Open in IMG/M
3300028056|Ga0268330_1057295Not Available520Open in IMG/M
3300028058|Ga0268332_1021740All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum790Open in IMG/M
3300028058|Ga0268332_1071222Not Available523Open in IMG/M
3300028058|Ga0268332_1078172Not Available505Open in IMG/M
3300028061|Ga0268314_1021816All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum694Open in IMG/M
3300028061|Ga0268314_1028348Not Available635Open in IMG/M
3300028064|Ga0268340_1085152Not Available506Open in IMG/M
3300028151|Ga0268308_1024342All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum561Open in IMG/M
3300028248|Ga0268312_1029866Not Available546Open in IMG/M
3300028262|Ga0268310_1051011Not Available507Open in IMG/M
3300028381|Ga0268264_11656487Not Available650Open in IMG/M
3300028470|Ga0268307_1010455All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum657Open in IMG/M
3300028470|Ga0268307_1014093Not Available601Open in IMG/M
3300028472|Ga0268315_1013684All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum628Open in IMG/M
3300032465|Ga0214493_1021835All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida1395Open in IMG/M
3300032689|Ga0214497_1108879Not Available596Open in IMG/M
3300032761|Ga0314733_1104591All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum528Open in IMG/M
3300033530|Ga0314760_1114940Not Available663Open in IMG/M
3300033539|Ga0314762_1101218Not Available533Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere73.33%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere8.89%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated7.78%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.22%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.11%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.11%
Switchgrass DegradingEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading1.11%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009975Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaGHost-AssociatedOpen in IMG/M
3300009980Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaGHost-AssociatedOpen in IMG/M
3300009981Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaGHost-AssociatedOpen in IMG/M
3300009989Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaGHost-AssociatedOpen in IMG/M
3300009992Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaGHost-AssociatedOpen in IMG/M
3300009994Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012949Switchgrass enrichment cultures co-assemblyEngineeredOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015278Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015284Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015293Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015315Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015331Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015333Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015339Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017412Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017421Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017440Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017447Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028050Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028053Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028056Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028061Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028064Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028151Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028248Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028262Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028470Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028472Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300032465Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032689Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032761Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033530Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033539Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070670_10217209313300005331Switchgrass RhizosphereMYLTSFVTTRIGVELAAVQRKLPDCVVVGLQLYSARTFHVTL
Ga0105251_1058897413300009011Switchgrass RhizosphereMYLISLVTTRIGVELAVVRRKLPDRVVVGLQLCSVRT
Ga0105250_1045020013300009092Switchgrass RhizosphereMYLASLVTTRIGVELAAVQDNLPDCVVVGLQLYSAKTFHVTPSLWIYKGGQGPPQN
Ga0105129_12187923300009975Switchgrass AssociatedMYLTSLVTTQIGVELAAVQRKLPDRDVVGLQLYSAR
Ga0105135_11230713300009980Switchgrass AssociatedIGVELATVQRKLPDYIVVGLQIYSARTFHVTLFPRIYKGGQGPPSKHINT*
Ga0105135_12789413300009980Switchgrass AssociatedMYHSSLVTTRIGIELAAVQRRLPDCVVVGLQLYSARTFHVTL
Ga0105135_12957323300009980Switchgrass AssociatedMYLTSLVTTWIGVELAAVQRKLPDRAVVGLQRYSVW
Ga0105133_11891213300009981Switchgrass AssociatedMYLTTFVTTRIGVELAAVQMKLPDCVVVELQLYSARTFHVTLSPRIYK
Ga0105131_11925013300009989Switchgrass AssociatedMYLTSFATTRIGVELAAVQKKLHDCVVVRFQLYSARTIHVTLSPRIY
Ga0105131_12187713300009989Switchgrass AssociatedMYLTSLVITRIDVELAAVQRKLPDCVVVGLQLYLARTFHVTLSLRIYKGGQGLPPKDINT
Ga0105131_14218413300009989Switchgrass AssociatedMYLTSLVTTRIGVELAVVQRKLSDCVVVGLQLYLARTFHVNLSARIYKGGQVLPR
Ga0105120_102367823300009992Switchgrass AssociatedMVYRTPLVTTQLGIELAVVQEKLPDCVVVGLQLYSARTFHVTLSPRIY
Ga0105126_105118523300009994Switchgrass AssociatedMYLISFVTIRIGVELVAVQRKLPDRAIVGFQLYSAKTFHVN
Ga0105139_104225523300009995Switchgrass AssociatedMYLTSLVTTRIGVELATVQRKLPDCVVVGFQLYWARNFHVTLSHRIYKGGQGPPQKNFNT
Ga0105139_106800713300009995Switchgrass AssociatedMYLISLVTTRIGVELLGVYRNLPHRIVVGLQLYSARTFHVTLSPRIYK
Ga0105139_108295513300009995Switchgrass AssociatedMNLTSLVTTRIGVELAAVQRKLPDCVVIGLQLYWAWTFHVTLSLRIYKGGQGPPRKTSTP
Ga0105139_110410313300009995Switchgrass AssociatedMYLISFVTARICIELAIVQRKLPDCVVVGLQMYLSRTFRVTQSPR
Ga0134125_1203492413300010371Terrestrial SoilMYLTSFVTTQIGVELAAVQRKQPARVVIGLKLYSARTFHVTMCPRIYNGEQGPP
Ga0134125_1231361623300010371Terrestrial SoilMYLTSLITTRIGVELAVVQRKLPDCIIVGLQLYSARTFFVTLYHRIYKGGQGPPP
Ga0134125_1263092023300010371Terrestrial SoilMYLTSFVTTRIGVELDAVQRKLPDCIVVGLQLNSARTFH
Ga0134124_1128846923300010397Terrestrial SoilMYLTSFVTIRIGIDLATVQRKLPDYIVVGFQLYWT
Ga0134124_1134951623300010397Terrestrial SoilMYLAYFVTTRIGIELAAVQRKLPDRVVVGLQLYSARTFHLTMFPRIYKGRQGLLQNTSTPKAI
Ga0134123_1147999613300010403Terrestrial SoilMYLTSLVTTRIGVELATVQRKLPDCVVVELQLYSTRTFHITMS
Ga0153798_1026689113300012949Switchgrass DegradingMYLTSFVTIRIGIELAAVQRKLPDCVVVGFQLYSTRTFHVTLSARIYKGRQGPPPKKSSIPN
Ga0153798_1027408313300012949Switchgrass DegradingMYLTSFVTTRIGVELAAIQRKLPDCVVVGFQLYSTRTFHVTLFPQIYKDGQ
Ga0157379_1248831513300014968Switchgrass RhizosphereMYLTSFVTIQIGIELAAVQMKLPDCVVVGLQLYWARTFYVTLSPRIYKGG
Ga0182183_108444823300015270Switchgrass PhyllosphereMYLTFLVTTRIGVELAAVQRKLPDCVVVVLQLYSARTFHLTLS
Ga0182102_104260123300015273Switchgrass PhyllosphereMYLTFVVTTRIGVELAAVQRKLPDCVIVGLQLYSARNFHVTL
Ga0182099_101809023300015278Switchgrass PhyllosphereMYLTSFVTIRIGIEQAVVQRKLPDCVVVGLHLYPARTFHVVRVPQLYNGGQ
Ga0182100_106828913300015280Switchgrass PhyllosphereMYLTPFVTTRIGVELAAVQRKLPDHVVVGLQLYSARTFHVTL
Ga0182101_102227023300015284Switchgrass PhyllosphereMYLTFLVTTRISVELAAIQRKLPDCAVVGHQLYSARTFHVT
Ga0182103_103736313300015293Switchgrass PhyllosphereMYLTSFVTTRIGVELSAVQRKLPDCVVVGLQLYSARTFHVTLT
Ga0182104_106559713300015297Switchgrass PhyllosphereMYLTSFVNTRIGVELAAVQKKLHDCVVVEFQLYSARTFHVTLSSRIYKGG
Ga0182104_108988613300015297Switchgrass PhyllosphereMYLTYFVTTRIGVELAAVQRKLLDCVVVGLQLYSARTFHVNLS
Ga0182184_102503813300015301Switchgrass PhyllosphereMYLTSFLTTRIGIELVAVQRKLPNCVVVGLQLYSART
Ga0182184_108824213300015301Switchgrass PhyllosphereMYLTSLVTTRIGIELAAVQRKLPDCVVVGLQLCSARTFYVTLFP
Ga0182184_110226813300015301Switchgrass PhyllosphereMYLTSFVTTRISVELAVVQRKLPDYVVLGFQLYSARTFLVTLSPRIYKGGGRAGVPSK
Ga0182162_106354013300015310Switchgrass PhyllosphereMYLTSLVTTRIGIELVAVQRKLPDWVVVGLQLYSARSFHVTLSLRIY
Ga0182162_106870723300015310Switchgrass PhyllosphereMYPNSPVTTRIGVELAAVQRKLPDCVIVGLQLHSTRAFHVTLSPWIYKGGQG
Ga0182182_103405513300015311Switchgrass PhyllosphereMYLTSFVTNRIGVKLAAVQGKLSERVVEGLQLYLARTFHVTLSPRIYKGRQ
Ga0182182_108484713300015311Switchgrass PhyllosphereMYLTSFVNTRIGIELAAVQRKLPDCVVVEFQLYSAKTFH
Ga0182168_103299213300015312Switchgrass PhyllosphereMYLTSFVTIRIDIELAAGQRKLPDYVVVGLQLYSARTFH
Ga0182168_111139923300015312Switchgrass PhyllosphereMYLTSSITTRIGVELAAVQRKLPDYIVVGLQLYSTRTFHVTLSLRI
Ga0182164_104713413300015313Switchgrass PhyllosphereMYLTSLVTTRIGVELAEVQMKLSDCIVVGFQLYLARTFHVTLSPRI
Ga0182164_107470113300015313Switchgrass PhyllosphereMYLTSFVNTQIGVELAAVQRKLPDYVVVEFQLYSARTLHVTL
Ga0182164_110136913300015313Switchgrass PhyllosphereMYLTSLVTTRIDVELVVVQRKLPDCIVVGIQLYSARTF
Ga0182164_112062313300015313Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRELPNSVVVGLQLYSAR
Ga0182120_102603113300015315Switchgrass PhyllosphereMYLTSLVTTRIGIELAAVQKKLPNLVAVGLQLYSARTFH
Ga0182120_106540613300015315Switchgrass PhyllosphereMYLISFVTIRIGVELAVVQRKLADCVVVGLQLYSARTFHVTLTSQTI*
Ga0182120_109880813300015315Switchgrass PhyllosphereMYLTSLVTTRIDVELATIQRKLPNCVVVGFQLYLA
Ga0182120_113994523300015315Switchgrass PhyllosphereMNLTSLVTTRIGVELAAVQRKLPDCVVIGLQLYWAWTF
Ga0182121_112818913300015316Switchgrass PhyllosphereMYLTSFVTTRIGIELAPVQKKLPNCVVLGLQQYSARIFHVTLSPRIYKGRQAPPPNNHQH
Ga0182121_114434713300015316Switchgrass PhyllosphereMYLTFLVTTRVGVELAAVQQKLLDCVVVGLQLYSDRIFHVTLSTRIYKGGLGPPPNIINT
Ga0182136_107289213300015317Switchgrass PhyllosphereMYLTSFAITRTGVELAAVQRKLPDCVVVGLQLYSVRTFHVTLSP
Ga0182130_102354613300015319Switchgrass PhyllosphereMYLTSFVTTRIGVELATAQRKLPDRVVVGFQLYSARTFHVTMSP
Ga0182130_106475113300015319Switchgrass PhyllosphereMYLTSFVTTQIGVELAAVQRKLSHCVVVGFPLYSARTFHVTLSPRIYKGGQGPPQNR
Ga0182130_109052913300015319Switchgrass PhyllosphereMYLTFLVTTRIGVELAAVQRKLPDLVVAGFQLYSARTFHVILS
Ga0182165_103148523300015320Switchgrass PhyllosphereMYLTSFVTTLIGVVLAVVQRKLPDCIVVGLQLCSARTF
Ga0182165_104466013300015320Switchgrass PhyllosphereMYLTSSVTTRIGVELAAVQRKLPDCVIIGFQLYSSRTFHVT
Ga0182165_104929513300015320Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRKLPDCFVVGLQLYPARIF
Ga0182165_111771223300015320Switchgrass PhyllosphereMYLTSPVTTQIGVEIVAVQRKLPDLVVVGLQLYSAR
Ga0182165_112502413300015320Switchgrass PhyllosphereMYLTTFVTTRLGVELAAIQMELPDCVVVGLQLYSARTF
Ga0182114_100299133300015327Switchgrass PhyllosphereMYLTSFVTTRIGIELAAVQRKLPDCVVVGLQLYSAWTF
Ga0182114_103874413300015327Switchgrass PhyllosphereMYLTSLVTTRIDVELAAVQKKLLDLIVVGLQLYSARNF
Ga0182114_105234513300015327Switchgrass PhyllosphereMYLISFVTTRLGVELVAVQRKLSDCVVVGLQLYSAR
Ga0182114_105771313300015327Switchgrass PhyllosphereMYLTSFVTTRIDIELAAVQRKLPDCVVVGLQLYSART
Ga0182114_107442523300015327Switchgrass PhyllosphereMYLTSFVTTRIGVELAAVQRKLPDCVVVGPQLDSARTFHVILSPRRYKDGQ
Ga0182114_112915113300015327Switchgrass PhyllosphereMYLTSFVTTRICIELAAVQRKLSDYVVVGLQLYSSRTFHVTLSLRIYKGGQGPPPNDHQ
Ga0182153_103699513300015328Switchgrass PhyllosphereMYLIFFVTIRIGIELAAVQMKLPDCVVVGLQLYWAR
Ga0182153_107162813300015328Switchgrass PhyllosphereMYLTSVVTTRIGVELAAVQRKLSDRVVVRLQLYSTRTFHVTLSPRIYK
Ga0182153_114125213300015328Switchgrass PhyllosphereMYLTSLVTPRIGVELAVVQRKIPDCIVVGLQLYSVRTFHVT
Ga0182135_115426413300015329Switchgrass PhyllosphereMYLTSFVTIRISVEQAVVQRKLPDCVVVGLQLCSASTFHVTLSP
Ga0182131_114780913300015331Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRKLPDLVVAGFQLYSARTFHVILS
Ga0182117_103945913300015332Switchgrass PhyllosphereMYLIYLVTTRIDVGLAAVQKKLPNCIVVGLQLYLARTFLVTLSP
Ga0182117_113137913300015332Switchgrass PhyllosphereMYLTSLITTRIGVELTAVRRKLPDRIVVELQLYSARTFH
Ga0182117_115064513300015332Switchgrass PhyllosphereMYLTSIVTIRIDVELAAIQSKLSDRAIVGLQLYLTRT
Ga0182147_107334313300015333Switchgrass PhyllosphereMYLTSLVTTRIGLELVAVQKKLPDRVVVGLRLYSARTFH
Ga0182147_112448813300015333Switchgrass PhyllosphereMYLTSFVTTRIGVGLAAVQRKLPDCVVVGLQLYSARTFHVT
Ga0182132_100389433300015334Switchgrass PhyllosphereTTQIGVELAAVQRKLPDCVVVGLQLYSAKTFHVTLSPRIYKGGQGTPRNI*
Ga0182132_115321123300015334Switchgrass PhyllosphereMYFTSFVTTRIGVGLAAVQRKLPDCVVVGFQLYSARTFH
Ga0182116_101324113300015335Switchgrass PhyllosphereMYLASLVTTRIGVELAAIQRKLPDRDVVGLKLYSARTFH
Ga0182116_111638523300015335Switchgrass PhyllosphereLYLTFVVTTRIGVELAVSQGKLPDLVGVGLQQCSLGLSM*
Ga0182150_109148723300015336Switchgrass PhyllosphereMYLISLVTTRIDVELAAVQRKLPDRVVVGPQLYSARTFHVTLFLRIYKGG
Ga0182150_114038823300015336Switchgrass PhyllosphereMYLTSLVTTQIGVELVAVQGKLPDHVVVRLQLYWARTF
Ga0182151_108863613300015337Switchgrass PhyllosphereLTSFVTIRIGIELDVVQRKLPDYVVVGFQLYSVRIFHVTLSPRIYKGGQVPPRNT*
Ga0182151_113068823300015337Switchgrass PhyllosphereMYLTSFVTTRIGIELTAVQMKLSDCVVVGLQLYSARTFHV
Ga0182151_114995713300015337Switchgrass PhyllosphereMYLTSLVTTRIGVELATVQTKLPDCVVVGFQLYSASTF
Ga0182137_105443523300015338Switchgrass PhyllosphereMYLTCLVTTQIGVELAAVQRKLPDRVVVGLQLYSA
Ga0182137_117204613300015338Switchgrass PhyllosphereMYLTSLVNTQIGVELAVVQKRLPDRVVVGLQLYWVR
Ga0182149_106979413300015339Switchgrass PhyllosphereMYLTCFATIRIGVELASVQENYPTMLVGLQLYWARTFHVTLSLRNI
Ga0182149_110674613300015339Switchgrass PhyllosphereMYLTSLVTARIGVELAEVQMKLSNCVVVGFQLYLARTFHVTLSPRIYKGRQGPSRNTSTPKAIQ
Ga0182149_112123223300015339Switchgrass PhyllosphereKLPDRVIVGLQLYSARTFHVTQSPRIYKGGQGSPSKNINT*
Ga0182149_112768613300015339Switchgrass PhyllosphereMYLTSFVTTRIGVGLAAVQRKLPDCVVVGFQLYSA
Ga0182133_110559313300015340Switchgrass PhyllosphereMYLISLVTTRICVELAEVQMKLSDCIVVGFQLYLARTFQVTLSPRIYKGR
Ga0182115_101379023300015348Switchgrass PhyllosphereMYLTSFVTTRIGIELAAVQRKLPDYVVVGLQLYSARTFRVTLS
Ga0182115_112448723300015348Switchgrass PhyllosphereMYLTSLVTTRIGVELAPVQRKLPDCVVIGLQPYSARTFHVTLSPR
Ga0182115_118266923300015348Switchgrass PhyllosphereMYLTSFVTARIGIELAAVQRKLPDRAVVGLQLYSA
Ga0182115_124382923300015348Switchgrass PhyllosphereMYLTTLVTTRIEVELAVVQRKLPDCVVVGLHLYSARTFHVILSPWIYKGG
Ga0182115_128009213300015348Switchgrass PhyllosphereMYFTSFITTRIGIKLAAVQGKLPECVVEGLQLYSARTFH
Ga0182115_129168413300015348Switchgrass PhyllosphereMYLTSLVTTQIGVELAVVQRKLPDCVVVGFQLYSAR
Ga0182185_100122763300015349Switchgrass PhyllosphereMYLTFFVNTQIGVELAAVQRKLPDYVVVEFQLYSAR
Ga0182185_102713623300015349Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRKLPDCVEVGLQLYSARSFYVTL
Ga0182185_117047713300015349Switchgrass PhyllosphereMYLTSFVTTRIGIELAAVQRKLPDRVVVGLQLYSARTFHVT
Ga0182185_119308313300015349Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRKLPDCIVVGLQLYSARTFHVT
Ga0182185_128064823300015349Switchgrass PhyllosphereMYLTSFVTTQIGVELAAVQRNLPDRVVVGLQLYSAR
Ga0182163_114895613300015350Switchgrass PhyllosphereMYLTSFVTIRIGIELTAVLRKLPDYVVVGFQLYSARTFH
Ga0182163_119642813300015350Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRKLTDCVVIGLQPYSARTFHVTLSPR
Ga0182163_121308613300015350Switchgrass PhyllosphereMYLTSFVTTRIGIELATVQRKLPDCVVVGLQLYSARIFH
Ga0182163_125314313300015350Switchgrass PhyllosphereMYLISLITTRIGLELAAVQRKLPDRVVVGLQLYSART
Ga0182169_110675313300015352Switchgrass PhyllosphereMYLTSFVTTRIGIELAAVQRKLSDYVVVELQLYSARTFHVTLSPRIYKGGQ
Ga0182169_121761813300015352Switchgrass PhyllosphereMYLNSFVTTRIGVELAAVQRKLPDCVVVGLQLYSAR
Ga0182169_123863313300015352Switchgrass PhyllosphereMHLISFVTTRIGVELAAVQRKLSDYVVVGLQLYSARTFHVTLSARIY
Ga0182169_124895823300015352Switchgrass PhyllosphereMYLTSFVPTRIGVELAAVQRKLPDYVVVGLQLYSARTFHV
Ga0182179_109123923300015353Switchgrass PhyllosphereMYLIFLVTTRIGVELVEVRRKLSDRVVVGLQLYSARTFHVTLSPRIYKGGQ
Ga0182179_111697223300015353Switchgrass PhyllosphereMYLTSFVTTRIGIKLAAVQRKLPDCVVVGLQLYSARTFHV
Ga0182179_118636213300015353Switchgrass PhyllosphereMYLNSLVTIRIGIELAAVQRKLLDYIVVGLQLNSARTFHVTLSPRIYKG
Ga0182179_118704313300015353Switchgrass PhyllosphereMESPTQIGVELAAVQRKLPDCTVVGLQLYSARTFHVTLSPR
Ga0182179_119208213300015353Switchgrass PhyllosphereMYLTSLVTTQIGLELAAVQKKLLDCVVVGLQLYSARTIHVT
Ga0182179_122685513300015353Switchgrass PhyllosphereMYLTSFVTTRIGVELAAIQRKLPDCVIVGLQLYSARTFHVT
Ga0182179_127571723300015353Switchgrass PhyllosphereMDVLNPFVTTRIGVVLAAVQRKLPDRVVEGLQLYLASTFHVTPSPRIYK
Ga0182179_128007613300015353Switchgrass PhyllosphereMYLTPLVTTQIGVELAAVQRKLPGLVVVGLQLYSARSFHVTQSPRI
Ga0182179_132049313300015353Switchgrass PhyllosphereMYLTSLVTTQIGVELAAVQRKLPDRVVVGLQLYLA
Ga0182167_119027623300015354Switchgrass PhyllosphereMYLTSFVTTRIGVELAAVQRKLPDRVVVGLQLYSDRAFYVNLFPRIYKGGKGPPPKLINI
Ga0182167_119765013300015354Switchgrass PhyllosphereMYLTYLVTTRLGVELAAVQRKLPDYIVVGLQLYLARIFRVTLSP
Ga0182167_120509513300015354Switchgrass PhyllosphereMYLTSFVTTRIGVELAVVHRKLSDSVIVGLQLYSARTFHVTLSL
Ga0182167_120762023300015354Switchgrass PhyllosphereMYLTSFVTTRIGVELAAVQRKLPDRVVVGLQLYSARTF
Ga0182167_122950113300015354Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRKQPDLVVVGLQLYSARTLHVTLSPRIYKG
Ga0182167_123607123300015354Switchgrass PhyllosphereMYLTSLVTTRIGVELAVVQRKLPNYVVVGLQLYSARTFHVTLSL
Ga0182167_126129113300015354Switchgrass PhyllosphereMYLISLIIIRIGVELAAVQRKLPDCVVVGLQLYSA
Ga0182167_127135013300015354Switchgrass PhyllosphereMYLTSLVTTRIGVKLAVVQRKLPDCVVVGLQLYSA
Ga0182167_127246213300015354Switchgrass PhyllosphereMYLISFITPRIGVELAAIQRKLSDCVVVVGLQLYSARTFHVTLSPRIYKGRQG
Ga0182167_128419923300015354Switchgrass PhyllosphereMYLTSFVTTRIGIELAVVQRKLPNCVVVGLQLYSAKTFH
Ga0182167_130041813300015354Switchgrass PhyllosphereMYLTSFVTTRIDIELAAVRMKLPDCVVVGLQLYSARTFNV
Ga0182167_132884713300015354Switchgrass PhyllosphereMYLISLVTSRIGVELAAVQRKTIRLYIVGFQLYSAWTFHVTLFPWIYKGGQGPPQNTSTPKAIQITTHDV
Ga0182197_107348613300017408Switchgrass PhyllosphereMYLTSFVTIRICVELAAVQRKLINCIVVGLQLYLARTFHVTLSLRIYKSGQGPP
Ga0182197_112355113300017408Switchgrass PhyllosphereMYLISLETTRIGIELAAVRRKLPDHVVVGLQLYSARTFHVTLSLRIYK
Ga0182197_112546913300017408Switchgrass PhyllosphereMYLTSLVTTRIGVELAAVQRKLPYCVVVGLQLYSARI
Ga0182199_111517613300017412Switchgrass PhyllosphereMYLTSFVNTQIGVELAAVQRKLPDYVVVEFQLYSARTLHVTLFPRI
Ga0182199_118620223300017412Switchgrass PhyllosphereMYLTSFVTTRIGVVLAAVQRKLPDRVVEGLQLYLASTFHVTPSPRIYKGGQEPPQNTSTS
Ga0182199_119022813300017412Switchgrass PhyllosphereMYLTSFVTIRIDTELAVVQRKLLNSVVVGLQLYSARTFHVTLPP
Ga0182195_120806313300017414Switchgrass PhyllosphereMYLTSLVTTRIGVELTVVQRKLPDCVVVGLQLYSART
Ga0182195_122262613300017414Switchgrass PhyllosphereMYLTSFLTTRIGIELVAVQRKLPDCVVVGLQLYSARTFHVT
Ga0182213_123688013300017421Switchgrass PhyllosphereMYLTFLATTRIGVELAAVQRKLPDCIVVGLQLYSARTFHVT
Ga0182196_103289713300017432Switchgrass PhyllosphereMYLTSFVTIRIGVELAAVQRKLLDCVVVGLQLYTAR
Ga0182194_107031413300017435Switchgrass PhyllosphereMYLISLVTIQISVELAVVQRKLPDCTIVGLQLYLARTFHVNLSPQIYK
Ga0182200_107762813300017439Switchgrass PhyllosphereMYLTSFVTTRIGVELAAVQGKLPDCVIVRLQLYSARS
Ga0182214_108737213300017440Switchgrass PhyllosphereMYLIYFVTTRIGVELAAVQRKLPDCVVVGLQLYSARTFHVNLSPR
Ga0182215_109146613300017447Switchgrass PhyllosphereMYLTSLVTTRIGVELAEVQMKLSDCVVVGFQLYLARTFHVTL
Ga0182216_101775523300017693Switchgrass PhyllosphereMYLTSLVTTRIGVRLAAVQRKLSDCVVGGLQLYSARTFHVTLS
Ga0182216_106754223300017693Switchgrass PhyllosphereMNLTSFVTIRIGIELAVVQRKLPDYVVVGFQLYSVRIFHVTLSPRIYKGGQGPPLNN
Ga0182216_112441413300017693Switchgrass PhyllosphereMYLISLVTTRIGIELAAVQRKLPDCIVVGLQLYSARTFHVT
Ga0182216_115570313300017693Switchgrass PhyllosphereFVTTQIGVELAAVQEKLPDWVAVGLQLYSVRIHVTLSPKVYKGG
Ga0182216_121501013300017693Switchgrass PhyllosphereMYLTSLVTTRIEVELAAVQRKLPDCVVVGLQLYSARTF
Ga0207681_1182140413300025923Switchgrass RhizosphereMYLTSLVTTRIGVELAAVQRKLPDCVVVGFQLYSARSFHVTL
Ga0207668_1070468113300025972Switchgrass RhizosphereMYLTSLVTTQIGVELAVVQRKLPVCVVVGLQLCSAR
Ga0207658_1209938313300025986Switchgrass RhizosphereMYLTSFVTTRISVGLAAVQRKLPDCVVVGFQLYLARTFHITLSPRIYK
Ga0207708_1021681613300026075Corn, Switchgrass And Miscanthus RhizosphereMYLISFVTSRIGIELAAVQRKLPDCVVVGLQLYSAR
Ga0207641_1230156413300026088Switchgrass RhizosphereMDVPYLSCKTTRIGVELAAVQRKLPDCIVVELQLYSVRTFHVTMSPQIYKGGQGPPPNN
Ga0268328_101538613300028050PhyllosphereMMYLISFVTTRIGIELAAVQRKLPDYVAVGLQLYSARTFHVILSPRIYK
Ga0268328_107287313300028050PhyllosphereMYLTSFVTIRIGVELAAVQRKLPDCVVVGLQLYSARTFQVTLSPR
Ga0268346_103639913300028053PhyllosphereMYLTSLVTTRIGVELAAVQRKLPDCVVVGLQLYSARTFH
Ga0268330_105729513300028056PhyllosphereMYLTSFVTTRIGVELAVVQRKLPDCVVVGLQLYSARTF
Ga0268332_102174013300028058PhyllosphereMYLNSLVTIRIGVELAAVQRKLLDYVVVGLQLNSARTFHVTLSPR
Ga0268332_107122213300028058PhyllosphereMDVPYLITTRIGVELAAVQRKLPDCVVVGFRLYSARTFHVTRS
Ga0268332_107817213300028058PhyllosphereMYLTSLVTIRIGVELAAVQRNLLDLVVVRLQLYSAWIFH
Ga0268314_102181613300028061PhyllosphereMYLTSFVTTRIGVELAAVQSKLPDCVVVEFQLYSART
Ga0268314_102834813300028061PhyllosphereMYLTSSVTTRIVVELAAVQRKLPDYIIIGFQLYSARTFHVTLSPQ
Ga0268340_108515213300028064PhyllosphereYLISLVTTRIGVELAAVQQKLPDHVVVELQLYLARTFLVTLSTQTI
Ga0268308_102434223300028151PhyllosphereMYLTSFVTIRIGVELAAVQRKLPDRVVVGLQLYSARTFH
Ga0268312_102986613300028248PhyllosphereMYLTSLLTIRIGVELAAVQRNLLDLVVVRLQLYSAWI
Ga0268310_105101113300028262PhyllosphereMYLTSLVTTRIGVELAAVQRKLPDCIVEGLQLYSARTFQVTLSP
Ga0268264_1165648713300028381Switchgrass RhizosphereMYLTSFVTTRIGVELAAVQRKLPDRVVVGLQLYSART
Ga0268307_101045523300028470PhyllosphereMYLTSFVTTQIGIELAAVQRKLPDCVVVGLQLYSARTF
Ga0268307_101409313300028470PhyllosphereMYLTSLVTTRIGVELAAVQRKLPDRVVVGLQLYLARSSQDPKAFSSQ
Ga0268315_101368413300028472PhyllosphereMYLASFVTTRIGVELAAVQRKLPDYVVVGLQLYSARTFRVTLSPLIYKD
Ga0214493_102183533300032465Switchgrass PhyllosphereMYLTSLVTTRIGVELSTVQRKLPDRIVVGLQLYSARTFHV
Ga0214497_110887923300032689Switchgrass PhyllosphereMYLTSLVTTRIGVELAVVQRKLPDLVVVGLQLYSASTFHVILS
Ga0314733_110459113300032761Switchgrass PhyllosphereMYLTSFVTIRIGIELATVQRKLPDCVIVGFQLYSAKTFHVTLPPR
Ga0314760_111494013300033530Switchgrass PhyllosphereVTTRIGVELAAVQTKLSDCVVVEFQLYSARTFHVTLSPRIYKDGQGPPQNINT
Ga0314762_110121813300033539Switchgrass PhyllosphereMYLTSLVTTRIGVKLAAVQRKLPDCVVVGFQLYSTRTFNVTS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.