Metagenome / Metatranscriptome Family F032023

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F032023
Family Type	Metagenome / Metatranscriptome
Number of Sequences	181
Average Sequence Length	56 residues
Representative Sequence	MQEEHLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Number of Associated Samples	134
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.12 %
% of genes near scaffold ends (potentially truncated)	18.23 %
% of genes from short scaffolds (< 2000 bps)	87.29 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.298 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.862 % of family members)
Environment Ontology (ENVO)	Unclassified (30.939 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.829 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.19% β-sheet: 0.00% Coil/Unstructured: 48.81%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.87624
a.25.1.1: Ferritin	d1nfva_	1nfv	0.86966
f.14.1.4: TRPM-like (melastatin-like transient receptor potential) channels	d6bcoa2	6bco	0.8606
a.25.1.1: Ferritin	d3bvfa1	3bvf	0.8572
a.25.1.1: Ferritin	d4iwka_	4iwk	0.85346

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF12833	HTH_18	5.52
PF00884	Sulfatase	4.42
PF13751	DDE_Tnp_1_6	2.21
PF00072	Response_reg	1.66
PF13458	Peripla_BP_6	1.10
PF00078	RVT_1	1.10
PF02371	Transposase_20	1.10
PF01548	DEDD_Tnp_IS110	1.10
PF13505	OMP_b-brl	1.10
PF00211	Guanylate_cyc	0.55
PF13442	Cytochrome_CBB3	0.55
PF03435	Sacchrp_dh_NADP	0.55
PF07536	HWE_HK	0.55
PF13185	GAF_2	0.55
PF14023	DUF4239	0.55
PF13181	TPR_8	0.55
PF14534	DUF4440	0.55
PF02810	SEC-C	0.55
PF13676	TIR_2	0.55
PF02861	Clp_N	0.55
PF07690	MFS_1	0.55
PF06863	DUF1254	0.55
PF05163	DinB	0.55
PF02586	SRAP	0.55
PF07238	PilZ	0.55
PF14319	Zn_Tnp_IS91	0.55
PF00805	Pentapeptide	0.55
PF13586	DDE_Tnp_1_2	0.55
PF04632	FUSC	0.55
PF08495	FIST	0.55
PF06742	DUF1214	0.55
PF05598	DUF772	0.55
PF13561	adh_short_C2	0.55
PF00196	GerE	0.55
PF14690	zf-ISL3	0.55
PF08238	Sel1	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.21
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.10
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.55
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	0.55
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.55
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.55
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.55
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.55
COG3287	FIST domain protein MJ1623, contains FIST_N and FIST_C domains	Signal transduction mechanisms [T]	0.55
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.55
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.55
COG4398	Small ligand-binding sensory domain FIST	Signal transduction mechanisms [T]	0.55
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.30 %
Unclassified	root	N/A	33.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.30 %
Unclassified	root	N/A	33.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.30 %
Unclassified	root	N/A	33.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.98 %
Unclassified	root	N/A	33.70 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.01 %
Unclassified	root	N/A	33.70 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	43.65 %
Unclassified	root	N/A	33.70 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	40.33 %
Unclassified	root	N/A	33.70 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	30.94 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	6.08 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.66 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1.10 %
Bradyrhizobium retamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1.10 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.10 %
Bradyrhizobium vignae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	0.55 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.55 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.55 %
Bradyrhizobium betae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium betae	0.55 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.55 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.70 %
Bradyrhizobium sp. 41S5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5	2.21 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.66 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1.10 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1.10 %
Bradyrhizobium retamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1.10 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.10 %
Bradyrhizobium sp. 186	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 186	0.55 %
Bradyrhizobium sp. YR681	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR681	0.55 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.55 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.55 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.55 %
Bradyrhizobium vignae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	0.55 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.55 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.55 %
Bradyrhizobium betae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium betae	0.55 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.55 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002HZLMU	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	509	Open in IMG/M
3300001593\|JGI12635J15846_10198203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1330	Open in IMG/M
3300001867\|JGI12627J18819_10001332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	8670	Open in IMG/M
3300001867\|JGI12627J18819_10159633	Not Available	917	Open in IMG/M
3300001867\|JGI12627J18819_10303917	Not Available	642	Open in IMG/M
3300002245\|JGIcombinedJ26739_100085627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2933	Open in IMG/M
3300002245\|JGIcombinedJ26739_100430989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1196	Open in IMG/M
3300002917\|JGI25616J43925_10234226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	694	Open in IMG/M
3300004082\|Ga0062384_100794069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	661	Open in IMG/M
3300004091\|Ga0062387_100175411	Not Available	1265	Open in IMG/M
3300004091\|Ga0062387_101331895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300004092\|Ga0062389_101091042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	984	Open in IMG/M
3300004092\|Ga0062389_104260856	Not Available	538	Open in IMG/M
3300005176\|Ga0066679_10238444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1169	Open in IMG/M
3300005179\|Ga0066684_10983361	Not Available	546	Open in IMG/M
3300005184\|Ga0066671_10091438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1665	Open in IMG/M
3300005187\|Ga0066675_10355402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1072	Open in IMG/M
3300005329\|Ga0070683_100001084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20456	Open in IMG/M
3300005332\|Ga0066388_100974468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1416	Open in IMG/M
3300005332\|Ga0066388_104403295	Not Available	717	Open in IMG/M
3300005434\|Ga0070709_10168267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1529	Open in IMG/M
3300005434\|Ga0070709_10330120	Not Available	1122	Open in IMG/M
3300005434\|Ga0070709_10624360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	832	Open in IMG/M
3300005435\|Ga0070714_101335644	Not Available	700	Open in IMG/M
3300005445\|Ga0070708_100314200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 186	1476	Open in IMG/M
3300005458\|Ga0070681_10340598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1409	Open in IMG/M
3300005458\|Ga0070681_10442496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1212	Open in IMG/M
3300005467\|Ga0070706_100232899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1719	Open in IMG/M
3300005468\|Ga0070707_100973094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	814	Open in IMG/M
3300005471\|Ga0070698_101110042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5	739	Open in IMG/M
3300005533\|Ga0070734_10281844	Not Available	951	Open in IMG/M
3300005546\|Ga0070696_101092645	Not Available	670	Open in IMG/M
3300005560\|Ga0066670_10435343	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005575\|Ga0066702_10807200	Not Available	558	Open in IMG/M
3300005587\|Ga0066654_10028922	Not Available	2291	Open in IMG/M
3300005921\|Ga0070766_10866179	Not Available	618	Open in IMG/M
3300005994\|Ga0066789_10453890	Not Available	535	Open in IMG/M
3300006028\|Ga0070717_10426122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300006172\|Ga0075018_10085307	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300006172\|Ga0075018_10475260	Not Available	648	Open in IMG/M
3300006173\|Ga0070716_100411423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300006178\|Ga0075367_10157159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1413	Open in IMG/M
3300006195\|Ga0075366_11036613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	512	Open in IMG/M
3300006196\|Ga0075422_10125047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1008	Open in IMG/M
3300006237\|Ga0097621_101813180	Not Available	582	Open in IMG/M
3300006354\|Ga0075021_10153998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1390	Open in IMG/M
3300006852\|Ga0075433_11346263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300006914\|Ga0075436_100133969	Not Available	1739	Open in IMG/M
3300006954\|Ga0079219_12201438	Not Available	531	Open in IMG/M
3300007255\|Ga0099791_10419377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300007265\|Ga0099794_10747032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	522	Open in IMG/M
3300009038\|Ga0099829_10519979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300009088\|Ga0099830_10343103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300009089\|Ga0099828_11156576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	687	Open in IMG/M
3300009143\|Ga0099792_10801246	Not Available	617	Open in IMG/M
3300009553\|Ga0105249_12122902	Not Available	635	Open in IMG/M
3300010154\|Ga0127503_10337492	Not Available	633	Open in IMG/M
3300010366\|Ga0126379_10979232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	950	Open in IMG/M
3300011120\|Ga0150983_10387500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300011120\|Ga0150983_16168525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	616	Open in IMG/M
3300011269\|Ga0137392_10261002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1427	Open in IMG/M
3300011270\|Ga0137391_10315210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300012096\|Ga0137389_11427606	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012200\|Ga0137382_10562490	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300012211\|Ga0137377_10189316	All Organisms → cellular organisms → Bacteria → Proteobacteria	1975	Open in IMG/M
3300012363\|Ga0137390_10319603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1534	Open in IMG/M
3300012514\|Ga0157330_1072810	Not Available	535	Open in IMG/M
3300012683\|Ga0137398_11014830	Not Available	575	Open in IMG/M
3300012917\|Ga0137395_10905696	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300012922\|Ga0137394_10466682	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300012924\|Ga0137413_11035780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5	646	Open in IMG/M
3300012925\|Ga0137419_10204682	Not Available	1463	Open in IMG/M
3300012989\|Ga0164305_12267956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	500	Open in IMG/M
3300013307\|Ga0157372_11532008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	768	Open in IMG/M
3300015242\|Ga0137412_10699622	Not Available	755	Open in IMG/M
3300015371\|Ga0132258_10377611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3514	Open in IMG/M
3300015371\|Ga0132258_11404562	Not Available	1764	Open in IMG/M
3300015371\|Ga0132258_12657861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1249	Open in IMG/M
3300015372\|Ga0132256_100914930	Not Available	993	Open in IMG/M
3300015373\|Ga0132257_100643156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1314	Open in IMG/M
3300015373\|Ga0132257_101075374	Not Available	1015	Open in IMG/M
3300015373\|Ga0132257_102859499	Not Available	629	Open in IMG/M
3300016270\|Ga0182036_11332041	Not Available	600	Open in IMG/M
3300016294\|Ga0182041_10815616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	834	Open in IMG/M
3300016422\|Ga0182039_11981220	Not Available	535	Open in IMG/M
3300018431\|Ga0066655_10917164	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300020579\|Ga0210407_10088256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2344	Open in IMG/M
3300020579\|Ga0210407_10419780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1047	Open in IMG/M
3300020579\|Ga0210407_10525472	Not Available	924	Open in IMG/M
3300020579\|Ga0210407_10965814	Not Available	651	Open in IMG/M
3300020580\|Ga0210403_10015137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	6203	Open in IMG/M
3300020580\|Ga0210403_10028284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4472	Open in IMG/M
3300020580\|Ga0210403_10180931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1728	Open in IMG/M
3300020581\|Ga0210399_10008179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8167	Open in IMG/M
3300020581\|Ga0210399_10068706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2867	Open in IMG/M
3300020581\|Ga0210399_10864917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300020583\|Ga0210401_10131424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2345	Open in IMG/M
3300020583\|Ga0210401_10427659	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300021086\|Ga0179596_10585025	Not Available	566	Open in IMG/M
3300021168\|Ga0210406_10051961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	3584	Open in IMG/M
3300021168\|Ga0210406_10427005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1058	Open in IMG/M
3300021170\|Ga0210400_10114397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2147	Open in IMG/M
3300021170\|Ga0210400_11097922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	644	Open in IMG/M
3300021171\|Ga0210405_10050167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3304	Open in IMG/M
3300021171\|Ga0210405_10438678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1027	Open in IMG/M
3300021178\|Ga0210408_10438830	All Organisms → cellular organisms → Bacteria → Proteobacteria	1039	Open in IMG/M
3300021401\|Ga0210393_11382382	Not Available	563	Open in IMG/M
3300021403\|Ga0210397_10053967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2587	Open in IMG/M
3300021403\|Ga0210397_10402771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300021404\|Ga0210389_10388306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	1097	Open in IMG/M
3300021404\|Ga0210389_11465261	Not Available	520	Open in IMG/M
3300021405\|Ga0210387_10084880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2621	Open in IMG/M
3300021405\|Ga0210387_10197263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1745	Open in IMG/M
3300021405\|Ga0210387_10419958	Not Available	1186	Open in IMG/M
3300021406\|Ga0210386_10700961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	873	Open in IMG/M
3300021407\|Ga0210383_10966730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300021420\|Ga0210394_10511539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1056	Open in IMG/M
3300021475\|Ga0210392_11064970	Not Available	606	Open in IMG/M
3300021478\|Ga0210402_10194254	All Organisms → cellular organisms → Bacteria → Proteobacteria	1863	Open in IMG/M
3300021478\|Ga0210402_10213593	Not Available	1775	Open in IMG/M
3300021478\|Ga0210402_10460461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1181	Open in IMG/M
3300021478\|Ga0210402_10713041	Not Available	926	Open in IMG/M
3300021478\|Ga0210402_11054302	Not Available	740	Open in IMG/M
3300021479\|Ga0210410_10125343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2279	Open in IMG/M
3300021479\|Ga0210410_10277676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium betae	1503	Open in IMG/M
3300021479\|Ga0210410_10502222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1083	Open in IMG/M
3300021479\|Ga0210410_11690917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300021559\|Ga0210409_10209890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1771	Open in IMG/M
3300025898\|Ga0207692_10101839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1578	Open in IMG/M
3300025905\|Ga0207685_10310370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	783	Open in IMG/M
3300025910\|Ga0207684_10725118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	844	Open in IMG/M
3300025910\|Ga0207684_11496724	Not Available	549	Open in IMG/M
3300025912\|Ga0207707_10001705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20219	Open in IMG/M
3300025915\|Ga0207693_10823663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	715	Open in IMG/M
3300025922\|Ga0207646_11162909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	677	Open in IMG/M
3300025929\|Ga0207664_11761441	Not Available	542	Open in IMG/M
3300025939\|Ga0207665_11257039	Not Available	590	Open in IMG/M
3300025939\|Ga0207665_11574998	Not Available	521	Open in IMG/M
3300025944\|Ga0207661_11469688	Not Available	625	Open in IMG/M
3300026319\|Ga0209647_1017755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4491	Open in IMG/M
3300026330\|Ga0209473_1294296	Not Available	543	Open in IMG/M
3300026490\|Ga0257153_1025302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	1222	Open in IMG/M
3300027061\|Ga0209729_1000396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2999	Open in IMG/M
3300027071\|Ga0209214_1025554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR681	770	Open in IMG/M
3300027502\|Ga0209622_1008688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1686	Open in IMG/M
3300027548\|Ga0209523_1031337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1066	Open in IMG/M
3300027610\|Ga0209528_1114089	Not Available	596	Open in IMG/M
3300027826\|Ga0209060_10058430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1844	Open in IMG/M
3300027902\|Ga0209048_10781879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	624	Open in IMG/M
3300027903\|Ga0209488_11085555	Not Available	547	Open in IMG/M
3300028047\|Ga0209526_10030373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3797	Open in IMG/M
3300028906\|Ga0308309_10695316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5	884	Open in IMG/M
3300031057\|Ga0170834_107161899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	957	Open in IMG/M
3300031231\|Ga0170824_118170846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	865	Open in IMG/M
3300031507\|Ga0307509_10569003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	809	Open in IMG/M
3300031715\|Ga0307476_10691831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	755	Open in IMG/M
3300031718\|Ga0307474_11144138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300031720\|Ga0307469_10731034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	901	Open in IMG/M
3300031720\|Ga0307469_12336404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	522	Open in IMG/M
3300031740\|Ga0307468_100465129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5	990	Open in IMG/M
3300031753\|Ga0307477_10231369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1282	Open in IMG/M
3300031753\|Ga0307477_10380622	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300031753\|Ga0307477_11115287	Not Available	514	Open in IMG/M
3300031820\|Ga0307473_10638453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	740	Open in IMG/M
3300031823\|Ga0307478_10533925	Not Available	979	Open in IMG/M
3300031912\|Ga0306921_10480068	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300031912\|Ga0306921_11743510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300031962\|Ga0307479_10841496	Not Available	892	Open in IMG/M
3300032001\|Ga0306922_10468409	Not Available	1345	Open in IMG/M
3300032044\|Ga0318558_10716837	Not Available	500	Open in IMG/M
3300032174\|Ga0307470_10071864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1871	Open in IMG/M
3300032180\|Ga0307471_100259429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1797	Open in IMG/M
3300032180\|Ga0307471_101930511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300032180\|Ga0307471_102365504	Not Available	671	Open in IMG/M
3300032770\|Ga0335085_12110420	Not Available	569	Open in IMG/M
3300032782\|Ga0335082_11612221	Not Available	522	Open in IMG/M
3300032829\|Ga0335070_12071254	Not Available	511	Open in IMG/M
3300032898\|Ga0335072_10351515	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1613	Open in IMG/M
3300033289\|Ga0310914_11184175	Not Available	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.16%
Host-Associated	Host-Associated	8.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.64%
Plants	Host-Associated → Plants	8.84%
Aquatic	Environmental → Aquatic	5.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.64%
Freshwater	Environmental → Aquatic → Freshwater	3.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.31%
Roots	Host-Associated → Plants → Roots	2.21%
Sediment	Environmental → Aquatic → Sediment	1.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.12%
Loam	Environmental → Terrestrial → Soil → Loam	23.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.66%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.10%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.55%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.55%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.66%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.10%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.55%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.55%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.55%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.10%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.10%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.10%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.55%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.55%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.55%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.55%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_10073720	2170459003	Grass Soil	MQEEHLTVDQCDELAKALSEDAARLPYGSERESLLQLAQGYRLLADMKRMVLRKVN
JGI12635J15846_101982033	3300001593	Forest Soil	MQEEHLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRVLADMKRMVLRKVN*
JGI12627J18819_100013328	3300001867	Forest Soil	VIQEEHLTADQCDELAKALREDATCLPHGSERDDLLQLTEGYRLLADMKRMVLHKVNDRV
JGI12627J18819_101596331	3300001867	Forest Soil	MQEERLTVDQCDELAKALHEDAARLPHGPERKNLLQLAEDYRLLADLKRMVLRKVIEP*
JGI12627J18819_103039171	3300001867	Forest Soil	MQEEQHLTVDQCDELAKALREDAACLPHGSERDYLLQLADDYRLLADMKRMVLRRVN*
JGIcombinedJ26739_1000856273	3300002245	Forest Soil	MQEERLTVDQCDELAKALREDAARLPHGSEKENLLQLAEGYRLLADMKRMVLRKVS*
JGIcombinedJ26739_1004309892	3300002245	Forest Soil	MQEEHLTIDQCDELAKALREDAARLPHGSERENLLRLAEDYRLLADMKRMVLRKVN*
JGI25616J43925_102342261	3300002917	Grasslands Soil	MQEEHLTVDQCDELAKALREDAARLPHGSERESLLQLAEGYRLLAEMKRMVLRKVN*
Ga0062384_1007940691	3300004082	Bog Forest Soil	MREEHLTVDQCDELAKALREDAARLPHGSERENLVQLAEGYRLLADMKKMVLRKVN*
Ga0062387_1001754112	3300004091	Bog Forest Soil	MPEKHLTVDQCDELAEALHEDAAQLPHGSDRENLSQLAEGYRLLAHMKRMVLRKVN*
Ga0062387_1013318951	3300004091	Bog Forest Soil	MQEQHLTVDQCDELAKALREDAACLPHGSERDYLLQLAEGYRLLADMKRMVLCKVN*
Ga0062389_1010910424	3300004092	Bog Forest Soil	GIDQIDCLRAVMQEEHLTVDQCDELAKALHQDAARLPNGSERENLLQLAEGYRVLAEMKRMVLRRVN*
Ga0062389_1042608561	3300004092	Bog Forest Soil	MREEHLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLCKVN*
Ga0066679_102384442	3300005176	Soil	MQEERLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0066684_109833612	3300005179	Soil	MQEERLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRVLADMKRMVLRKVN*HVQSAVR
Ga0066671_100914383	3300005184	Soil	LTVDQCDELAKALHEDAARLPHGSERENLLQLAKGYRLLADMKRMVLRKVN*
Ga0066675_103554021	3300005187	Soil	MQEERLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRVLADMKRMVLRKVN*
Ga0070683_10000108413	3300005329	Corn Rhizosphere	MQQEHLTVDQCDELVNALREDAACLPPGTQREKLLQLAEDYRLLADMKRMVLRKVN*
Ga0066388_1009744684	3300005332	Tropical Forest Soil	LGIVQIDCLRVVMQEEHLTVEQCDELTKALREDAACLPHGSERDSLLQLAEDYRLLADLKRMALRKVN*
Ga0066388_1044032952	3300005332	Tropical Forest Soil	MQKEHLTVDQCNELAKALREDAAFLPHGSERDYLLRLAEGYRLLAEMKRVVLRKVN*
Ga0070709_101682671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MEEENLTVEQCDELTEALREDAACLPHGSERDFLLRLAEGYRLLADMKRRLVRKIN*
Ga0070709_103301203	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKESHLTVDQCDELAKALHEDAARLRHGPERENMLRLAEGYRLLAEMKRMVLRKVN*
Ga0070709_106243601	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQEEHLTVDQCDELAKALREHAARLPHGSERENLLQLAEGYRALSDVKKIILRKVN*
Ga0070714_1013356442	3300005435	Agricultural Soil	MQEEHLTVDQCDELAKALREHAARLPHGSERKNLLQLAEGYRALSDVKKIILRKVN*
Ga0070708_1003142001	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQEEHLTADQCDELAKALREDAARLPPGSDKENLLQLAEGYRALADMKRMVLRKVN*
Ga0070681_103405983	3300005458	Corn Rhizosphere	MQEERLTVDQCDELAKALHEDAVRLPHGSERENLLQLAEGYRLLADIKRMVLRKVN*
Ga0070681_104424962	3300005458	Corn Rhizosphere	MLEEHLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0070706_1002328992	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLEEHLTVDQCDELANALREDAVRLPPGSERENLLQLAEDYRVLADMKRMVLGKVN*
Ga0070707_1009730942	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKEEHLTVDQCDELAKALHEDAARLRHGPERENLLRLAEGYRLLADMKRMVLRKVN*
Ga0070698_1011100422	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQEEHLTVDQCDELAKALREHAARLPHGSERENLLQLAEGYRALSDVKRIVLRKVN*
Ga0070734_100205213	3300005533	Surface Soil	MRDEHLTVDECDELEKALRQDAASLPNGPDKENLLHLAEGYRMLANVKRMVLRKVN*
Ga0070734_102818441	3300005533	Surface Soil	MEEENLTVEQCDKLAKALREDAACLPHGLERNYLLQLAEGYCLLADMKRRVLRKIN*
Ga0070696_1010926451	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MQEEHLTVDQCDELTKALREDAARLPQGSKKESLLQLAEGYRLLADMKRMVLRKVN*
Ga0066670_104353432	3300005560	Soil	MEHLTADQCDELAKALREDAARLPHGSKKENLLQLAEGYRLLVDMKRMVLRKTN*
Ga0066702_108072001	3300005575	Soil	MEHLTADQCDELAKALREDAARLPHGSKKENLLQLAEGYRLLADMKRMVLRKTN*
Ga0066654_100289222	3300005587	Soil	MQEERLTVDQCDELAKALREDAARLPHGSKRENLLQLAEGYRLLADMKRMVLRKTN*
Ga0070766_108661791	3300005921	Soil	QCDELAKALREDAAQLPHGSDKENLLQLAENYRVLADMKRMVFRKVN*
Ga0066789_104538902	3300005994	Soil	MHAERLTVDQCDELAKALHELAARLPHGSERENPLQLAEGYRLLADMKKMVLRKVN*
Ga0070717_104261222	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MQEERLTVDQCDELAKALHEDAARLPHGPERKKLLWLAEGYRLLADMKRMVLRKVN*
Ga0075018_100853073	3300006172	Watersheds	MQEEHLTVDQCDELAKALREDAARLPQGSERENLLQLAEGYRVLADMKRMVLRRVN*
Ga0075018_104752601	3300006172	Watersheds	MQEEHLTVDQCDELAKALREDAARLPHGSKRENLLQLDGYRVLAEMKRMVLRKVN*
Ga0070716_1004114231	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ARVMEEENLTVEQCDELTEALREDAACLPHGSERDFLLRLAEGYRLLADMKRRLVRKIN*
Ga0075367_101571592	3300006178	Populus Endosphere	MPTEHLTIDQCDELVRALREDAARLPYGAERQKLLQLAEDYRVLAEMKRIVRRKAN*
Ga0075366_110366132	3300006195	Populus Endosphere	MPTEHLTIDQCDELVRALREDAARLPYGAERQKLLQLAEDYRVLAEMKR
Ga0075422_101250472	3300006196	Populus Rhizosphere	MPTEHLTIDQCDELVRALREDAARLPYGAEKQKLLQLAEDYRVLAEMKRIVRRKAN*
Ga0097621_1018131801	3300006237	Miscanthus Rhizosphere	MQEEHLTVDQCDELTKALREDAARLPHGREREGLLQLAEGYRLLADMKRMVLRKVN*
Ga0075021_101539984	3300006354	Watersheds	MQEEHLTVDQCDELAKALREDAARLPQGSERENLLQLAEGYRVLADMKRMVLRKVN*
Ga0075433_113462631	3300006852	Populus Rhizosphere	MQEEHLTVDQCDELTKALREDAARLPQGSKKESLLQLAEGYRLLA
Ga0075436_1001339692	3300006914	Populus Rhizosphere	MQEEHLTVDQCDELTKALREDAARLPHGSKKESLLQLAEGYRLLADMKRMVLRKVN*
Ga0079219_122014382	3300006954	Agricultural Soil	MEEENLTVEQCDELAKGLREDAVCLPHGSERDYLLQLAEGYRLLADMKRRVLRKIN*
Ga0099791_104193772	3300007255	Vadose Zone Soil	MQDEHLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRVLADMK
Ga0099794_107470322	3300007265	Vadose Zone Soil	MRAAMLEEHLTVDQCDELVKALREDAACLPHGPEREKLLQLAQGYRLLADMKRTVLRKVN
Ga0099829_105199791	3300009038	Vadose Zone Soil	MQEERLTVDQCDELAKALHEDAARLPHGSERENLFQLAEGYRLLADMKRMVLRKVN*
Ga0099830_103431032	3300009088	Vadose Zone Soil	MQEERLTVDQCDELAKALHEDAARLPHGSERENLLQLAEDYRVLARMKRMVLRKVN*
Ga0099828_111565762	3300009089	Vadose Zone Soil	MQEERLTVDQCDELAKALHEDAARLPHGSKRENLLQLAEGHRLLADMKRMLLRKVNYMSKAP*
Ga0099792_108012461	3300009143	Vadose Zone Soil	MQEEHLTIGQCDELAKALREDAARSPHGSERENLLQLAEDYRVLADMKGMVLRKVN*
Ga0105249_121229021	3300009553	Switchgrass Rhizosphere	MQEEHLTVDQCDELTKALREDAARLPHGSERESLLQLAEGYRLLADMKRMVLRKVN*
Ga0127503_103374921	3300010154	Soil	LERAVRTFPKEEHLTADQCDELAKALHEDAARLPHGPERENLLRLAEGYRLLADMKRMALRKVN*
Ga0126379_109792322	3300010366	Tropical Forest Soil	MQEEHLTVGQCDELAKALREEAASLSHGSERDDLLRLAEGYRLLADMKRMVFRKVN*
Ga0150983_103875001	3300011120	Forest Soil	MQEERLTVDQCDELAKALQEDAARLPRGSARENLSQLAEGHRLLAGMKRVVLRKVN*
Ga0150983_161685251	3300011120	Forest Soil	MQEERLTVDQCDELAKALYEDAARLPHGSERENLLQLAEGYRLLAT*
Ga0137392_102610022	3300011269	Vadose Zone Soil	LEIDQIDCLRAVMQEERLTVDQCDELAKALHEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0137391_103152103	3300011270	Vadose Zone Soil	MQEERLTVDQCDELAKALHEDAARLQHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0137389_114276062	3300012096	Vadose Zone Soil	MQEERLTVDQCDELAKALHEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0137382_105624902	3300012200	Vadose Zone Soil	VDQCDELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0137377_101893161	3300012211	Vadose Zone Soil	MQEEHLTVDQCDELAKALREDAARLPQGSERENLLQLAEGYRVLADMKRM
Ga0137390_103196032	3300012363	Vadose Zone Soil	MQEERLTVDQCDELAKALHEDAAHLPHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0157330_10728102	3300012514	Soil	EAVMQEERLTVDQCDELTKALREDAARLPCGSERESLLQLAEGYRLLAEMKRSVLRKVN*
Ga0137398_110148301	3300012683	Vadose Zone Soil	MQEERLTIGQCDELAKALHEDAFRLPHGSERENLLQLAEGYRLLADMKRQVLLKVS*
Ga0137395_109056961	3300012917	Vadose Zone Soil	IGWESTKRAVMQEERLTVDQCDELAKALHEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN*
Ga0137394_104666822	3300012922	Vadose Zone Soil	MENERLTVAQCDELVEALLQDAAALPDGSEREKLLKLAEGYRDLADMKRMVLRKVN*
Ga0137413_110357802	3300012924	Vadose Zone Soil	MQEEHLTIGQCDELAKALHEDAFRLPHGSERENLLQLAEGYRVLADMKGMVLRKVN*
Ga0137419_102046823	3300012925	Vadose Zone Soil	MQEERLTVDQCDELVKALREDAACLPHGPEREKLLQLAQGYRLLADMKRTVLRKVN*
Ga0164305_122679561	3300012989	Soil	MQEEHLTVDQCDELAKALHEDAARLPHGPERENLLRLAEGYRLLADMKRMVLRKVN*
Ga0157372_115320082	3300013307	Corn Rhizosphere	MQQEHLTVDQCDELVNALREDASCLPPGTRREKLLQLAEDYRLLADMKRMVLRKVN*
Ga0137412_106996222	3300015242	Vadose Zone Soil	MDCLRAVMQEEHLTIGQCDELAKALHEDAFRLPHGSERENLLQLAEGYRVLADMKGMVLRKVN*
Ga0132258_103776113	3300015371	Arabidopsis Rhizosphere	MPKSIEAVMQEERLTVDQCDELTKALREDAARLPYGSERESLLQLAEGYRLLADLKRMVLRKLN*
Ga0132258_114045622	3300015371	Arabidopsis Rhizosphere	LEIESPEAVMPTEHLTVDQCDQLVKALREDAARLPHGAERQKLLQLAEDYRVLAEMKRIVLRKVN*
Ga0132258_126578612	3300015371	Arabidopsis Rhizosphere	LEVPKSTEVRDAMQEKNLTIEQCDELAKALREDAACLPHGSNRENLLQLAEGYRLLAEMKRSVLRKVN*
Ga0132256_1009149301	3300015372	Arabidopsis Rhizosphere	MPKSIEAVMQEERLTVDQCDELTKALREDAARLPCGSERESLLQLAEGYRILADLKRMVLRKVN*
Ga0132257_1006431562	3300015373	Arabidopsis Rhizosphere	LEIESPEAVMPTEHLTIDQCDELVRALREDAARLPYGAERQKLLQLAEDYRVLAEMKRIV
Ga0132257_1010753742	3300015373	Arabidopsis Rhizosphere	EHLTVDQCDELVKALREDAARLPDGAERQKLLQLAEDFRVLAEMKRIVLRKVN*
Ga0132257_1028594992	3300015373	Arabidopsis Rhizosphere	LEVPKSTEVRDAMQEKNLTIEQCDELAKALREDAACLPHGSKRENLLQLAEGYRLLAEMKRSVLRKVN*
Ga0182036_113320411	3300016270	Soil	MQEEHLTVDQCDELVKALREDAARLPQGSERQYLLQLAEGYRLLADMKRMVLRKVN
Ga0182041_108156162	3300016294	Soil	WESTKSIARAVMLEEHLTVDQCDELAEALREDAARLPHGSERENLLQLAHGYRVLADMKRMVLRKVH
Ga0182039_119812201	3300016422	Soil	MQEEHLTVDQCDELVKALREDAARLPHGSERENLLQLAEAYRLLADMKRMVLRKVIEL
Ga0066655_109171641	3300018431	Grasslands Soil	MQEERLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRVLAD
Ga0210407_100882562	3300020579	Soil	MQEEHLTVDQCDELAKALREDAACLPHGSERDYLLQLAEGYRLLADMKRMVLRKVN
Ga0210407_104197801	3300020579	Soil	MHEDHLTVDQCDELAKALREDAARLPHGSDKENLLQLAKGYRVLADMKRVILRKVN
Ga0210407_105254721	3300020579	Soil	MQEDQLTVDQCDELAKAMREDAARLPPGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0210407_109658141	3300020579	Soil	CDELAKALYEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0210403_100151372	3300020580	Soil	MQEEHLTVDQCDELARALREDAACLPHGSEKEHLLQLAEGYRLLADMKRMALRKVN
Ga0210403_100282841	3300020580	Soil	MQEERLTVDQCDELAKALFEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0210403_101809312	3300020580	Soil	MQEEHLTVDLCDELAKALHEDAARLPHGPERENLLRLAEGYRLLADMKRMVLRKVN
Ga0210399_100081792	3300020581	Soil	MHEEHLTVDECDELAKALLEEAALLPHGSKRENLLQLAEDYRVLADMKRMVLRKVS
Ga0210399_100687062	3300020581	Soil	MQDEHLTVDQCDELAKAMREDAARLPHGSERENLLQLAEGYRVLADMKRMVFRKVN
Ga0210399_108649172	3300020581	Soil	MQEEHLTVDQCDELAKALREDAARLPHGSERENLLRLAQGYRVLADMKRMVLRKVN
Ga0210401_101314242	3300020583	Soil	MQEERLTVDQCDELAKALREDAAQLPHGSERENLLQLARGYRVLAEMKRMVLRKVN
Ga0210401_104276592	3300020583	Soil	VMQEEHVTVDQCDELARALREDAACLPHGSEKEHLLQLAEGYRLLADMKRMALRKVN
Ga0179596_105850252	3300021086	Vadose Zone Soil	MQEERLTVDQCDELAKALHEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRNVN
Ga0210406_100519614	3300021168	Soil	MQEGHLTADQCDELAKALREDAARLPHGSERENLMRLAEGYRVLADMKRMVLRRVN
Ga0210406_104270051	3300021168	Soil	MQEERLTVDQCDELAKALFEDAARLPHGSERENLLQLAEGYRLLAYMKRMVLRKVN
Ga0210400_101143975	3300021170	Soil	MQEEHLTIDQCDELAKALREDAARLPHGSERESLLQLAEGYRLLADMKRMVLRKVN
Ga0210400_110979221	3300021170	Soil	MQEEEHLTVDQCDELANALREDAARLPHGSERENLFQLAEGYRLLAAMKRMVLRKVN
Ga0210405_100501674	3300021171	Soil	MLEEHLTVDQCDELAKALRENAVRLPHGSERENLLQLADGYRALADMKRMVLRKVN
Ga0210405_104386782	3300021171	Soil	MQEERLTVDQCDELAKALQEDAAHLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0210408_104388301	3300021178	Soil	RAGMQEERLTVDQCDELAKALREDAARLPHGSEKENLLQLAEGYRLLADMKRMVLRKVS
Ga0210393_113823821	3300021401	Soil	MQEEHLTVDQCDELAKALREDAARLPHGSERESLLQLAEGYRLLAEMKRLVLRKVN
Ga0210397_100539672	3300021403	Soil	MQEEHLSVDECDELAKALREDAARLPHGSEREYLLQLAEDYSVLADMKRIVLRKVN
Ga0210397_104027712	3300021403	Soil	MQEEHLTADQCDELAKALREVAACLPHGSERDDLLRLAEGYRLLADMKRMVLRNVN
Ga0210389_103883061	3300021404	Soil	VMQDEHLTVDQCDELAKAMREDAARLPHGSERENLLQLAEGYRVLADMKRMVFRKVN
Ga0210389_114652611	3300021404	Soil	MQEEHLTVDQCDELAKALREDAARLPHGSERESLLQLAEGYRLLAEMKRMVLRKVN
Ga0210387_100848802	3300021405	Soil	MSEEPLTVDQCDQLVKALREDADRLPDGSKREKLLQLAEDCRVLGEMKRMVFRKVN
Ga0210387_101972632	3300021405	Soil	MQEEHLTADQCDELAKALREVAACLPHGSERDDLLQLAEGYRLLADMKRMVLRKVN
Ga0210387_104199582	3300021405	Soil	QCDELAKAMREDAARLPHGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0210386_107009612	3300021406	Soil	MQEEHLTVDQCDQLAKAVHEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0210383_109667301	3300021407	Soil	MQEEHLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0210394_105115391	3300021420	Soil	MQEEHLTVDQCDELAKALREDAARLPHGSKRENLLQLAEGYRLLADMKRMVLRKVN
Ga0210392_100535291	3300021475	Soil	ERLGQALFGHRLNRLLRAAMKESHLTVDQCDELAKALHEDAARLQHGPERENMLRLAEGYRLLAEMKRMVLRKVN
Ga0210392_110649701	3300021475	Soil	MQEEHLTIDQCDELAKALREDAARLPLGSDKEDLLQLAEGYRVLADMKRMVFRKVN
Ga0210402_101942542	3300021478	Soil	LGIAQIDCLRAVMQEEHLTVDQCDELAKALGEDAARLPYGSERESLLQLAQGYRLLADMKRMVLRKVN
Ga0210402_102135931	3300021478	Soil	MQEEHLTVDQCDQLAKALRQDAARLPRGLERENLLQLAEGYSVLAKMKRMVLRKVN
Ga0210402_104604611	3300021478	Soil	MQEEHLTADQCNELAKALREDAARLPHGSERENLLRLAQGYRVLADMKRMVYRRVN
Ga0210402_107130411	3300021478	Soil	MEEEHLTIDQCDELAKGLREDAARLPHGSERESLLQLAEGYRLLADIK
Ga0210402_110543021	3300021478	Soil	MQEEHLTVDQCDELAKALREDATCLPQGPERDYLLQLAEGYRLLADMKRMGLRKVN
Ga0210410_101253431	3300021479	Soil	MQAEEHLTVDQCDELANALREDAARLPHGSERENLFQLAEGYRLLAAMKRMVLRKVN
Ga0210410_102776762	3300021479	Soil	MQEERLTVDQCDELAKALREDAAQLPHGSERENLLQLARGSRVLAEMKRMVLRKVN
Ga0210410_105022221	3300021479	Soil	MQEEHLTVDQCDELAKALREDAACLPHGAERENLLQLAKGYRLLAAMKRMVLRKVN
Ga0210410_116909171	3300021479	Soil	MQEEHLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0210409_102098901	3300021559	Soil	QEDQLTVDQCDELAKAMREDAARLPPGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0207692_101018393	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RVMEEENLTVEQCDELTEALREDAACLPHGSERDFLLRLAEGYRLLADMKRRLVRKIN
Ga0207685_103103702	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MQEEHLTVDQCDELAKALREDAARLPHGSERESLLQLAEGYRRLAEMKRMVLRKVN
Ga0207684_107251181	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQEEHLTADQCDELAKALREDAARLPPGSDKENLLQLAEGYRALADMKRMVLRKVN
Ga0207684_114967241	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLEEHLTVDQCDELAKALREDAVRLPHGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0207707_1000170512	3300025912	Corn Rhizosphere	MQQEHLTVDQCDELVNALREDAACLPPGTQREKLLQLAEDYRLLADMKRMVLRKVN
Ga0207693_108236631	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQEEHLTVDQCDELTKALREDAARLPHGSERENLLQLAEGYRVLADMKRMVLRKAN
Ga0207646_111629091	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKEEHLTVDQCDELAKALHEDAARLRHGPERENLLRLAEGYRLLADMKRMVLRKVN
Ga0207664_117614412	3300025929	Agricultural Soil	MKESHLTVDQCDELAKALHEDAARLRHGPERENMLRLAEGYRLLAD
Ga0207665_112570392	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEEENLTFEQCDELTEALREDAACLPHGSERDFLLRLAEGYRLLADMKRRLVRKIN
Ga0207665_115749981	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	QCDELAKALHEDAARLRHGPERENMLRLAEGYRLLAEMKRMVLRKVN
Ga0207661_114696881	3300025944	Corn Rhizosphere	MQEERLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0209647_10177552	3300026319	Grasslands Soil	MQEERLTVDQCDELAKALHEDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0209473_12942962	3300026330	Soil	MQEERLTVDQCDELAKALREDAARLPHGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0257153_10253021	3300026490	Soil	MLEEHLTVDQCDELVKALREDAACLPHGPEREKLLQLAQGYRLLADMKRTVLRKVN
Ga0209729_10003964	3300027061	Forest Soil	MQEERLTVDQCDELAKALHEDAARLPHGPERENLLRLAEGYRLLADMKRMVLHKVNDRV
Ga0209214_10255542	3300027071	Forest Soil	LTADQCDELAKALREDATCLPHGSERDDLLQLTEGYRLLADMKRMVLHKVNDRV
Ga0209622_10086882	3300027502	Forest Soil	MQEEQHLTVDQCDELAKALREDAACLPHGSERDYLLQLADDYRLLADMKRMVLRRVN
Ga0209523_10313371	3300027548	Forest Soil	MQEEHLTVDQCDELAKALREDATCLPHGSERDDLLQLTEGYRLLADMKRMVLHKVNDRV
Ga0209528_11140891	3300027610	Forest Soil	MQEERLTVDQCDELAKALREDAARLPHGSEKENLLQLAEGYRLLADMKRMVLRKVS
Ga0209060_100584304	3300027826	Surface Soil	MRDEHLTVDECDELEKALRQDAASLPKGPDKENLLHLAEGYRMLANVKRMVLRKVN
Ga0209048_107818791	3300027902	Freshwater Lake Sediment	AIMQEEHLTVDQCNELAKALREDAARLPHGSKREKLLQLAEGYRVLADMKRMVLRNVN
Ga0209488_110855551	3300027903	Vadose Zone Soil	MQEERVTVDQCDELAKALHEDAARLPHGSERENLFQLAEGYRLLADMKRMVLRKVN
Ga0209526_100303731	3300028047	Forest Soil	MLEEHLTVDQCDELAKALREDAVRLPPGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0308309_106953161	3300028906	Soil	MREEHLTVDQCDELAKALREDAAQLPHGSDKENLLQLAENYGVLADMKRMVLRKVN
Ga0170834_1071618991	3300031057	Forest Soil	MQEEHLTVDQCDELAKALREDAAGLPHGSERESLLQLAEGYRLLAEMKRMVLRKVN
Ga0170824_1181708462	3300031231	Forest Soil	MQEEHLTVDQCNELAKALREDAAGLPHGSERESLLQLAEGYRLLAEMKRMVLRKVN
Ga0307509_105690031	3300031507	Ectomycorrhiza	MQEEHLTVDQCDELAKALREDAARLPQGSERENLLQLAEGYRVLADMKRMVLRKVN
Ga0307476_106918312	3300031715	Hardwood Forest Soil	MQEERLTVDQCDELAKALHEDAARLPHGPERKNLLQLAEDYRLLADLKRMVLRKVIEP
Ga0307474_111441381	3300031718	Hardwood Forest Soil	HLSVDQCDELAKALREVAACLPHGSKRDNLLQLAEGYRVLAEMKRMVFRKVN
Ga0307469_107310342	3300031720	Hardwood Forest Soil	LEIESPEAVMRTEHLTVDQCDELVKALREDAARLPHGAERQKLLQLAEDYRVLAEMKRIVRRKAN
Ga0307469_123364042	3300031720	Hardwood Forest Soil	MQEEHLTVDQCDELAKALHEDAARLPHGSERENLLRLAEGYRLLADMKRMVLRKVN
Ga0307468_1004651292	3300031740	Hardwood Forest Soil	MPTEHLTIDQCDELVRALREDAARLPYGAERQKLLQLAEDYRVLAEMKRIVRRKAN
Ga0307477_102313691	3300031753	Hardwood Forest Soil	MQEERLTVDQCDELAKALHEDAARLPHGPEREKLLWLAEGYRLLADMKRMVLRKVN
Ga0307477_103806222	3300031753	Hardwood Forest Soil	MQEERLTVDQCDELAKALQEDAARLPHGSERKNLLQLAEGYRLLADMKRMVLRKVIEP
Ga0307477_111152871	3300031753	Hardwood Forest Soil	MQEEDLTVDQCEELAKALREDAARLPHGSERENLLRLAEGYRLLADMKRMVLRKVN
Ga0307473_106384532	3300031820	Hardwood Forest Soil	MQEEHLTVDQCDELAKALREDAARLPRGSERESLLQLAEGYRLLADMKRMVLRKVN
Ga0307478_105339251	3300031823	Hardwood Forest Soil	MQEERLTVDQCDELAKALHEDAARLPHGPERENLLRLAKGYRLLADMKRMVLRKVN
Ga0306921_104800682	3300031912	Soil	MQEEHLTLDQCDELAKALREDAARLPQGSKRVHLLQLAEGYRLLADMKRMVLRKVI
Ga0306921_117435101	3300031912	Soil	MQEEHLTVDQCDELAEALREAAAPLPHGSERDCLLQLAEGYRLLADMKRM
Ga0307479_108414961	3300031962	Hardwood Forest Soil	MQEEDLTVDQCEELAKALREDAARLPHGSERENLLQLAEGYRLLADMKRMVLRKVN
Ga0306922_104684094	3300032001	Soil	QIDCLEGPTMQEEHLTLDQCDELAKALREDAARLPQGSKRVHLLQLAEGYRLLADMKRMVLRKVI
Ga0318558_107168371	3300032044	Soil	MLEERLTVDQCDELAKALHEDAARLPHGLERENLLQLAEAYRLLADMKRMVLRKVIE
Ga0307470_100718642	3300032174	Hardwood Forest Soil	MPTEHLTVDQCDELVKALRDARLPHGAERQKLLQLAEDYRVLAEMKRIVRRKAN
Ga0307471_1002594292	3300032180	Hardwood Forest Soil	DQCHELAKALREDADRLPDGPEREKLLQLAEDCRVLGEMKRMVLRKVN
Ga0307471_1019305112	3300032180	Hardwood Forest Soil	MQEERLTVDQCDELAKALHEDAARLPHGSERENLLRLAEGYRLLADMKRMVLRKVD
Ga0307471_1023655041	3300032180	Hardwood Forest Soil	MQEKHLTADQCDELAKALREDAARLLHGSERENLLQLAEGFRVLADMKRMVLREAN
Ga0335085_121104202	3300032770	Soil	MPEENLTLDQCDELAKALREDAACLPHGSKREKLLQLAEDFRILAKLKRMVLRNVN
Ga0335082_116122211	3300032782	Soil	MPEEHLTLDECDEIAKALREDAARLPHGSKRENLLLLAADFLILAEMKRMVLRQVN
Ga0335070_120712541	3300032829	Soil	MQEEHLTVDQCDELVKALIEDAARVPVGPKREHLLQLAEGYRLLAEMKRIVLRKIN
Ga0335072_103515152	3300032898	Soil	MPEEQLTIEQCDELAKALREDAALLSHGSERENLLQLAEGYRLLADIKRMVRMVLREVN
Ga0310914_111841751	3300033289	Soil	MLEERLTVDQCDELAKALHEDAARLPHGLERENLLQLAEAYRLLADMKRMVLRKVIEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032023

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences